Cmc07g0193041 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0193041
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr07: 14284081 .. 14285589 (+)
RNA-Seq Expression	Cmc07g0193041
Synteny	Cmc07g0193041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTTGAAATGGAGTGTATGTACTTCAATTCAGTGTGGGAACTTGTAGATCTACCTGAAGGTGTAAAATCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAAATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTTTTAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCACCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGATGAATCGATCCATTTATGGGTTGAAACAATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACTGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCATTGGGAATGATGTGGGATACTTTACTGACATTAAAGCTTGGCTAGCAGTCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCATAAGAACAAAACGCTAGCATTGTCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCGATGAAGAACTCTAAGAAAGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGACAGCTTAGTGTATTATATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTGGGAATAGTCAATAGGTATCAGTCCAATCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACTGATAAGGATTCTAGGAAATCCACATCGAGATCAGTGTTCACCTTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGTAGACTCTACAATAGAGGCTGAATACGTCGCTACTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAAGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGTTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACAAGATATGTACATTAGGTAA

mRNA sequence

ATGGACCTTGAAATGGAGTGTATGTACTTCAATTCAGTGTGGGAACTTGTAGATCTACCTGAAGGTGTAAAATCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAAATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTTTTAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCACCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGATGAATCGATCCATTTATGGGTTGAAACAATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACTGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCATTGGGAATGATGTGGGATACTTTACTGACATTAAAGCTTGGCTAGCAGTCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCATAAGAACAAAACGCTAGCATTGTCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCGATGAAGAACTCTAAGAAAGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGACAGCTTAGTGTATTATATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTGGGAATAGTCAATAGGTATCAGTCCAATCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACTGATAAGGATTCTAGGAAATCCACATCGAGATCAGTGTTCACCTTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGTAGACTCTACAATAGAGGCTGAATACGTCGCTACTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAAGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGTTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACAAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGGACCTTGAAATGGAGTGTATGTACTTCAATTCAGTGTGGGAACTTGTAGATCTACCTGAAGGTGTAAAATCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAAATTCAGCTGGGAAGGTACAGACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTAACTATGAGGAAACTTTTTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTTTTAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCACCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGTAAGATGAATCGATCCATTTATGGGTTGAAACAATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACTGTTTTGACCAAAACGTTGATGAACCTTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCATTGGGAATGATGTGGGATACTTTACTGACATTAAAGCTTGGCTAGCAGTCCAATTCCAAATGAAAGATTTAGAAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCATAAGAACAAAACGCTAGCATTGTCTCAAGCAACCTATATCGACAAAATGTTGGTTCGATATTCGATGAAGAACTCTAAGAAAGGTTTATTACCTTTCAGGCATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGACAGCTTAGTGTATTATATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTGGGAATAGTCAATAGGTATCAGTCCAATCCAGGGTTAGACCATTGGACGGCGGTTAAAATTATTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACTGATAAGGATTCTAGGAAATCCACATCGAGATCAGTGTTCACCTTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGTAGACTCTACAATAGAGGCTGAATACGTCGCTACTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAACATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGACAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAAGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGTTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACAAGATATGTACATTAGGTAA

Protein sequence

MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKVCKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTAKVFEGHLESLGLQDMYIR

Homology

[Close]

BLAST of Cmc07g0193041 vs. NCBI nr
Match: KAA0045325.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1016.9 bits (2628), Expect = 5.9e-293
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 5   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 64
           MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE
Sbjct: 1   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 60

Query: 65  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 124
           TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV
Sbjct: 61  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 120

Query: 125 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG 184
           CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG
Sbjct: 121 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG 180

Query: 185 NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK 244
           NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK
Sbjct: 181 NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK 240

Query: 245 NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV 304
           NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV
Sbjct: 241 NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV 300

Query: 305 NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS 364
           NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS
Sbjct: 301 NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS 360

Query: 365 VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL 424
           VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL
Sbjct: 361 VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL 420

Query: 425 YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA 484
           YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA
Sbjct: 421 YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA 480

Query: 485 KVFEGHLESLGLQDMYIR 503
           KVFEGHLESLGLQDMYIR
Sbjct: 481 KVFEGHLESLGLQDMYIR 498

[Close]

BLAST of Cmc07g0193041 vs. NCBI nr
Match: TYJ96907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 971.8 bits (2511), Expect = 2.2e-279
Identity = 481/499 (96.39%), Postives = 487/499 (97.60%), Query Frame = 0


Query: 5   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 64
           ME MYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQT KARLVAKGYTQREGVNYEE
Sbjct: 1   MESMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTSKARLVAKGYTQREGVNYEE 60

Query: 65  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 124
           TFS VAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMS  EGFITQGQ+QKV
Sbjct: 61  TFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSQLEGFITQGQDQKV 120

Query: 125 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDI-LI 184
           CK+NRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDI LI
Sbjct: 121 CKLNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILLI 180

Query: 185 GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSM 244
           GNDVGY  DIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYI+KMLVRYSM
Sbjct: 181 GNDVGYLIDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYINKMLVRYSM 240

Query: 245 KNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGI 304
           +NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMR IPYASAVDSLVYYMLCTRPDICYVVGI
Sbjct: 241 QNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVDSLVYYMLCTRPDICYVVGI 300

Query: 305 VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSR 364
           VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSR
Sbjct: 301 VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSR 360

Query: 365 SVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPIT 424
           SVFTLNGGAVVWRSIKQGCIVDSTIE EYVATCEAAK+A WLRKFLHDLEVVPNMNLPIT
Sbjct: 361 SVFTLNGGAVVWRSIKQGCIVDSTIEVEYVATCEAAKKADWLRKFLHDLEVVPNMNLPIT 420

Query: 425 LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT 484
           LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT
Sbjct: 421 LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT 480

Query: 485 AKVFEGHLESLGLQDMYIR 503
           AKVFEGHLESLGL+DMYIR
Sbjct: 481 AKVFEGHLESLGLRDMYIR 499

[Close]

BLAST of Cmc07g0193041 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 951.4 bits (2458), Expect = 3.0e-273
Identity = 472/504 (93.65%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYTQREGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 791

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 792  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL EAQYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 1091

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWLRKFLHDLEVVPNM
Sbjct: 1092 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1151

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1212 TKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0193041 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 951.4 bits (2458), Expect = 3.0e-273
Identity = 472/504 (93.65%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYTQREGV
Sbjct: 606  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 665

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 666  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 725

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 726  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 785

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL EAQYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 786  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 845

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 846  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 905

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR
Sbjct: 906  YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 965

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWLRKFLHDLEVVPNM
Sbjct: 966  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1025

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1026 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1085

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1086 TKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc07g0193041 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 941.8 bits (2433), Expect = 2.4e-270
Identity = 467/504 (92.66%), Postives = 481/504 (95.44%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYT++EGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGV 791

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 792  DYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL E QYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSR 1091

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTSRSVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWL+KFLHDLEVVPNM
Sbjct: 1092 KSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNM 1151

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1212 TKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 3.9e-122
Identity = 221/499 (44.29%), Postives = 325/499 (65.13%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            M  EME +  N  ++LV+LP+G + + CKW++K K++   K+  +KARLV KG+ Q++G+
Sbjct: 830  MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +++E FSPV  + SIR +LS+A   D E+ Q+DVKTAF +G+LEE I+M  PEGF   G+
Sbjct: 890  DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949

Query: 121  EQKVCKMNRSIYGLKQS-RSWNIRFDTAIKSYCFDQNVDEPCVY-KKINKGKVAFLVLYV 180
            +  VCK+N+S+YGLKQ+ R W ++FD+ +KS  + +   +PCVY K+ ++     L+LYV
Sbjct: 950  KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYV 1009

Query: 181  DDILI-GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKM 240
            DD+LI G D G    +K  L+  F MKDL  AQ +LG++I+R+  ++ L LSQ  YI+++
Sbjct: 1010 DDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERV 1069

Query: 241  LVRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDI 300
            L R++MKN+K    P    + LSK+ CP T +E  +M ++PY+SAV SL+Y M+CTRPDI
Sbjct: 1070 LERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDI 1129

Query: 301  CYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDS 360
             + VG+V+R+  NPG +HW AVK IL+YLR T    L +G  D IL GYTD+D   D D+
Sbjct: 1130 AHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDN 1189

Query: 361  RKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPN 420
            RKS++  +FT +GGA+ W+S  Q C+  ST EAEY+A  E  KE +WL++FL +L +   
Sbjct: 1190 RKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL--- 1249

Query: 421  MNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDP 480
                  +YCD+   +  SK    H R KHI+ +YH IRE+V    + V KI++  N  D 
Sbjct: 1250 HQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADM 1309

Query: 481  FTKTLTAKVFEGHLESLGL 497
             TK +    FE   E +G+
Sbjct: 1310 LTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 307.4 bits (786), Expect = 3.0e-82
Identity = 178/508 (35.04%), Postives = 282/508 (55.51%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            ++ E+     N+ W +   PE    +  +W++  K N  G    +KARLVA+G+TQ+  +
Sbjct: 910  INTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQI 969

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETF+PVA + S R +LS+   Y+ ++ QMDVKTAF NG L+E I+M  P+G      
Sbjct: 970  DYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCN 1029

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVY--KKINKGKVAFLVLY 180
               VCK+N++IYGLKQ +R W   F+ A+K   F  +  + C+Y   K N  +  +++LY
Sbjct: 1030 SDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLY 1089

Query: 181  VDDILIG-NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDK 240
            VDD++I   D+    + K +L  +F+M DL E ++ +GI+I  + +   + LSQ+ Y+ K
Sbjct: 1090 VDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKK 1149

Query: 241  MLVRYSMKNSKKGLLPFRHGVHL----SKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLC 300
            +L +++M+N      P    ++     S E C             P  S +  L+Y MLC
Sbjct: 1150 ILSKFNMENCNAVSTPLPSKINYELLNSDEDC-----------NTPCRSLIGCLMYIMLC 1209

Query: 301  TRPDICYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYG---AKDLILTGYTDS 360
            TRPD+   V I++RY S    + W  +K +L+YL+ T D  L++    A +  + GY DS
Sbjct: 1210 TRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDS 1269

Query: 361  DFQTDKDSRKSTSRSVFTL-NGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKF 420
            D+   +  RKST+  +F + +   + W + +Q  +  S+ EAEY+A  EA +EA+WL+  
Sbjct: 1270 DWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFL 1329

Query: 421  LHDLEVVPNMNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKI 480
            L  + +   +  PI +Y DN G ++ +  P  HKR KHI+ KYH  RE VQ   + +  I
Sbjct: 1330 LTSINI--KLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYI 1389

Query: 481  ASEHNIVDPFTKTLTAKVFEGHLESLGL 497
             +E+ + D FTK L A  F    + LGL
Sbjct: 1390 PTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 8.0e-75
Identity = 171/500 (34.20%), Postives = 257/500 (51.40%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELV-DLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREG 60
            M  E+     N  W+LV   P  V  +GC+WI+ +K NS G +  +KARLVAKGY QR G
Sbjct: 955  MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPG 1014

Query: 61   VNYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQG 120
            ++Y ETFSPV    SIRI+L +A    + I Q+DV  AF  G L + ++MS P GF+ + 
Sbjct: 1015 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKD 1074

Query: 121  QEQKVCKMNRSIYGLKQS-RSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYV 180
            +   VC++ ++IYGLKQ+ R+W +   T + +  F  ++ +  ++       + ++++YV
Sbjct: 1075 RPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYV 1134

Query: 181  DDILI-GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKM 240
            DDILI GND          L+ +F +K+ E+  Y LGI+  R  +   L LSQ  Y   +
Sbjct: 1135 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQG--LHLSQRRYTLDL 1194

Query: 241  LVRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDI 300
            L R +M  +K    P      L+     K P   E      Y   V SL  Y+  TRPD+
Sbjct: 1195 LARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE------YRGIVGSL-QYLAFTRPDL 1254

Query: 301  CYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKD 360
             Y V  +++Y   P  DHW A+K +L+YL  T D+ + +     L L  Y+D+D+  D D
Sbjct: 1255 SYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTD 1314

Query: 361  SRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVP 420
               ST+  +  L    + W S KQ  +V S+ EAEY +    + E  W+   L +L +  
Sbjct: 1315 DYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGI-- 1374

Query: 421  NMNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVD 480
             ++ P  +YCDN G       P  H R KHI   YH IR  VQ   + V  +++   + D
Sbjct: 1375 QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLAD 1434

Query: 481  PFTKTLTAKVFEGHLESLGL 497
              TK L+   F+     +G+
Sbjct: 1435 TLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.4e-73
Identity = 174/500 (34.80%), Postives = 255/500 (51.00%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEG-VKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREG 60
            M  E+     N  W+LV  P   V  +GC+WI+ +K NS G +  +KARLVAKGY QR G
Sbjct: 972  MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPG 1031

Query: 61   VNYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQG 120
            ++Y ETFSPV    SIRI+L +A    + I Q+DV  AF  G L + ++MS P GFI + 
Sbjct: 1032 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKD 1091

Query: 121  QEQKVCKMNRSIYGLKQS-RSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYV 180
            +   VCK+ +++YGLKQ+ R+W +     + +  F  +V +  ++       + ++++YV
Sbjct: 1092 RPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYV 1151

Query: 181  DDILI-GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKM 240
            DDILI GND     +    L+ +F +KD EE  Y LGI+  R      L LSQ  YI  +
Sbjct: 1152 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTG--LHLSQRRYILDL 1211

Query: 241  LVRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDI 300
            L R +M  +K    P      LS     K     E      Y   V SL  Y+  TRPDI
Sbjct: 1212 LARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE------YRGIVGSL-QYLAFTRPDI 1271

Query: 301  CYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKD 360
             Y V  ++++   P  +H  A+K IL+YL  T ++ + +     L L  Y+D+D+  DKD
Sbjct: 1272 SYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKD 1331

Query: 361  SRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVP 420
               ST+  +  L    + W S KQ  +V S+ EAEY +    + E  W+   L +L +  
Sbjct: 1332 DYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI-- 1391

Query: 421  NMNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVD 480
             +  P  +YCDN G       P  H R KHI   YH IR  VQ   + V  +++   + D
Sbjct: 1392 RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLAD 1451

Query: 481  PFTKTLTAKVFEGHLESLGL 497
              TK L+   F+     +G+
Sbjct: 1452 TLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-26
Identity = 61/133 (45.86%), Postives = 90/133 (67.67%), Query Frame = 0


Query: 274 MRRIPYASAVDSLVYYMLCTRPDICYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYM 333
           M+ +PY SAV +++Y M+ TRPD+   VG+++++ S+P   HW A+K +L+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 334 LVY-GAKDLILTGYTDSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEY 393
           L +  A    L GY+D+D+  D +SR+STS  +F LNGG V WRS KQ  +  S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 394 VATCEAAKEAVWL 406
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL
Match: A0A5A7TVB5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00980 PE=4 SV=1)

HSP 1 Score: 1016.9 bits (2628), Expect = 2.9e-293
Identity = 498/498 (100.00%), Postives = 498/498 (100.00%), Query Frame = 0


Query: 5   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 64
           MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE
Sbjct: 1   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 60

Query: 65  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 124
           TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV
Sbjct: 61  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 120

Query: 125 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG 184
           CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG
Sbjct: 121 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILIG 180

Query: 185 NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK 244
           NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK
Sbjct: 181 NDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSMK 240

Query: 245 NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV 304
           NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV
Sbjct: 241 NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGIV 300

Query: 305 NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS 364
           NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS
Sbjct: 301 NRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSRS 360

Query: 365 VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL 424
           VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL
Sbjct: 361 VFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPITL 420

Query: 425 YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA 484
           YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA
Sbjct: 421 YCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLTA 480

Query: 485 KVFEGHLESLGLQDMYIR 503
           KVFEGHLESLGLQDMYIR
Sbjct: 481 KVFEGHLESLGLQDMYIR 498

[Close]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL
Match: A0A5D3BCQ5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G00080 PE=4 SV=1)

HSP 1 Score: 971.8 bits (2511), Expect = 1.1e-279
Identity = 481/499 (96.39%), Postives = 487/499 (97.60%), Query Frame = 0


Query: 5   MECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGVNYEE 64
           ME MYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQT KARLVAKGYTQREGVNYEE
Sbjct: 1   MESMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTSKARLVAKGYTQREGVNYEE 60

Query: 65  TFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQEQKV 124
           TFS VAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMS  EGFITQGQ+QKV
Sbjct: 61  TFSHVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSQLEGFITQGQDQKV 120

Query: 125 CKMNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDI-LI 184
           CK+NRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDI LI
Sbjct: 121 CKLNRSIYGLKQSRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVDDILLI 180

Query: 185 GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKMLVRYSM 244
           GNDVGY  DIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYI+KMLVRYSM
Sbjct: 181 GNDVGYLIDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYINKMLVRYSM 240

Query: 245 KNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDICYVVGI 304
           +NSKKGLLPFRHGVHLSKEQCPKTPQEVEDMR IPYASAVDSLVYYMLCTRPDICYVVGI
Sbjct: 241 QNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRCIPYASAVDSLVYYMLCTRPDICYVVGI 300

Query: 305 VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSR 364
           VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTD DFQTDKDSRKSTSR
Sbjct: 301 VNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDYDFQTDKDSRKSTSR 360

Query: 365 SVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNMNLPIT 424
           SVFTLNGGAVVWRSIKQGCIVDSTIE EYVATCEAAK+A WLRKFLHDLEVVPNMNLPIT
Sbjct: 361 SVFTLNGGAVVWRSIKQGCIVDSTIEVEYVATCEAAKKADWLRKFLHDLEVVPNMNLPIT 420

Query: 425 LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT 484
           LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT
Sbjct: 421 LYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPFTKTLT 480

Query: 485 AKVFEGHLESLGLQDMYIR 503
           AKVFEGHLESLGL+DMYIR
Sbjct: 481 AKVFEGHLESLGLRDMYIR 499

[Close]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.5e-273
Identity = 472/504 (93.65%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYTQREGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 791

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 792  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL EAQYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 1091

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWLRKFLHDLEVVPNM
Sbjct: 1092 KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1151

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1212 TKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 1.5e-273
Identity = 472/504 (93.65%), Postives = 483/504 (95.83%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYTQREGV
Sbjct: 606  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGV 665

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 666  DYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 725

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 726  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 785

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL EAQYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 786  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLL 845

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 846  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 905

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKI+LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR
Sbjct: 906  YAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 965

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTS SVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWLRKFLHDLEVVPNM
Sbjct: 966  KSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNM 1025

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1026 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1085

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1086 TKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 941.8 bits (2433), Expect = 1.2e-270
Identity = 467/504 (92.66%), Postives = 481/504 (95.44%), Query Frame = 0


Query: 1    MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
            MDLEME MYFNSVWELVDLPEGVK IGCKWIYKRKR+SAGKVQTFKARLVAKGYT++EGV
Sbjct: 732  MDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGV 791

Query: 61   NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFITQGQ 120
            +YEETFS VAMLKSIRILLSIA FYDYEIWQMDVKTAF NGNLEESIFMS PEGFITQGQ
Sbjct: 792  DYEETFSSVAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQ 851

Query: 121  EQKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLVLYVD 180
            EQKVCK+NRSIYGLKQ SRSWNIRFDTAIKSY FDQNVDEPCVYKKINKGKVAFLVLYVD
Sbjct: 852  EQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVD 911

Query: 181  DI-LIGNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYIDKML 240
            DI LIGNDVGY TD+KAWLA QFQMKDL E QYVLGIQIIRD KNKTLALSQATYIDK+L
Sbjct: 912  DILLIGNDVGYLTDVKAWLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLL 971

Query: 241  VRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTRPDIC 300
            VRYSM+NSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYASAV SL+Y MLCTRPDIC
Sbjct: 972  VRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDIC 1031

Query: 301  YVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSR 360
            Y VGIV+RYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSR
Sbjct: 1032 YAVGIVSRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSR 1091

Query: 361  KSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLEVVPNM 420
            KSTSRSVFTLNGGAVVWRSIKQGCI DST+EAEYVA CEAAKEAVWL+KFLHDLEVVPNM
Sbjct: 1092 KSTSRSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNM 1151

Query: 421  NLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIREIVQRRDVIVTKIASEHNIVDPF 480
            NLPITLYCDNSG VANSKEPRSHKRGKHIERKYHLIREIVQR DVIVTKIASEHNI DPF
Sbjct: 1152 NLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPF 1211

Query: 481  TKTLTAKVFEGHLESLGLQDMYIR 503
            TKTLTAKVFEGHLESLGL+DMYIR
Sbjct: 1212 TKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0193041 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 264.2 bits (674), Expect = 2.1e-70
Identity = 159/463 (34.34%), Postives = 253/463 (54.64%), Query Frame = 0


Query: 1   MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
           MD E+  M     WE+  LP   K IGCKW+YK K NS G ++ +KARLVAKGYTQ+EG+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  NYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFFNGNLEESIFMSHPEGFIT-QG 120
           ++ ETFSPV  L S++++L+I+  Y++ + Q+D+  AF NG+L+E I+M  P G+   QG
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

Query: 121 QE---QKVCKMNRSIYGLKQ-SRSWNIRFDTAIKSYCFDQNVDEPCVYKKINKGKVAFLV 180
                  VC + +SIYGLKQ SR W ++F   +  + F Q+  +   + KI       ++
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281

Query: 181 LYVDDILI-GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQATYI 240
           +YVDDI+I  N+     ++K+ L   F+++DL   +Y LG++I R      + + Q  Y 
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG--INICQRKYA 341

Query: 241 DKMLVRYSMKNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYYMLCTR 300
             +L    +   K   +P    V  S      +  +  D +   Y   +  L+Y  + TR
Sbjct: 342 LDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVDAK--AYRRLIGRLMYLQI-TR 401

Query: 301 PDICYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDYMLVYGAK-DLILTGYTDSDFQT 360
            DI + V  ++++   P L H  AV  IL Y++ T    L Y ++ ++ L  ++D+ FQ+
Sbjct: 402 LDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQS 461

Query: 361 DKDSRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVWLRKFLHDLE 420
            KD+R+ST+     L    + W+S KQ  +  S+ EAEY A   A  E +WL +F  +L+
Sbjct: 462 CKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQ 521

Query: 421 VVPNMNLPITLYCDNSGTVANSKEPRSHKRGKHIERKYHLIRE 457
           +   ++ P  L+CDN+  +  +     H+R KHIE   H +RE
Sbjct: 522 L--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc07g0193041 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 5.0e-16
Identity = 72/236 (30.51%), Postives = 112/236 (47.46%), Query Frame = 0


Query: 173 FLVLYVDDILI-GNDVGYFTDIKAWLAVQFQMKDLEEAQYVLGIQIIRDHKNKTLALSQA 232
           +L+LYVDDIL+ G+       +   L+  F MKDL    Y LGIQ I+ H +  L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQ-IKTHPS-GLFLSQT 61

Query: 233 TYIDKMLVRYSMKNSK--KGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVDSLVYY 292
            Y +++L    M + K     LP +    +S  + P    +  D R I  A      + Y
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFRSIVGA------LQY 121

Query: 293 MLCTRPDICYVVGIVNRYQSNPGLDHWTAVKIILKYLRRTRDY-MLVYGAKDLILTGYTD 352
           +  TRPDI Y V IV +    P L  +  +K +L+Y++ T  + + ++    L +  + D
Sbjct: 122 LTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 353 SDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIVDSTIEAEYVATCEAAKEAVW 405
           SD+     +R+ST+     L    + W + +Q  +  S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0193041 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 76.6 bits (187), Expect = 6.2e-14
Identity = 35/82 (42.68%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 1   MDLEMECMYFNSVWELVDLPEGVKSIGCKWIYKRKRNSAGKVQTFKARLVAKGYTQREGV 60
           M  E++ +  N  W LV  P     +GCKW++K K +S G +   KARLVAKG+ Q EG+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  NYEETFSPVAMLKSIRILLSIA 83
            + ET+SPV    +IR +L++A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc07g0193041 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045325.1	5.9e-293	100.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYJ96907.1	2.2e-279	96.39	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0025945.1	3.0e-273	93.65	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	3.0e-273	93.65	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	2.4e-270	92.66	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0193041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.9e-122	44.29	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.0e-82	35.04	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	8.0e-75	34.20	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.4e-73	34.80	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	1.4e-26	45.86	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc07g0193041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TVB5	2.9e-293	100.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G0098...	[more]
A0A5D3BCQ5	1.1e-279	96.39	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold220G0008...	[more]
A0A5A7TZD0	1.5e-273	93.65	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	1.5e-273	93.65	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7T2V9	1.2e-270	92.66	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc07g0193041 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-70	34.34	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.0e-16	30.51	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	6.2e-14	42.68	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 11..252 e-value: 1.6E-65 score: 221.1
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 4..339
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 344..485 e-value: 5.79703E-61 score: 194.609
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 11..452

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0193041.1	Cmc07g0193041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding