Cmc07g0192661 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192661
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr07: 13510680 .. 13511615 (-)
RNA-Seq Expression	Cmc07g0192661
Synteny	Cmc07g0192661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAACTAGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCTTTTTCAAGCCCAGTACTGCTGGTTAAAAAGAAAGATGGCAGTTGGCGTTTCTGTGTCGATTACCGTGCAGTAAACAACGCTACAATTCCGGATAAATTCCCAATACCAGTGGTTGAAGAACTATTTGATGAGTTAAATGGTGCAACCGTGTTCTCAAAGATAGACCTCAAGTCAGGATATCATCAAATAAGAATGGTTGATGAGGATATTCCAAAAACGGCTTTTCGTACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCTCCTGCCACTTTTCAAGCCTTGATGAATAACATTTTTAGACCATTTTTGAGAAAATTTGTTTTGGTCTTCTTCGACGATATCCTGATCTGCAGCAAAAATGAGAAGGACCACGTAGAGCATATTGAAAAGGTCTTCCTCACATTAAGAAGACATGCCTTATTCGCCAATAAAAAAAAGTGTAATTTCGGTCAGCAAAAGATTGAATATTTGGGGCATGTCATATCAGGGGAAGGAGTAGAAGTAGACTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTCCGGGGATTCCTTGGATTAACAGGCTACTATAGGAGATTCGTCCAACATTATGGGTCGATAGCTGCCCCTTTAACTCAACTCCTTAAAAAGGGTGGATTTAAATGGAGTGAAGAATCCGAAAAAGCCTTCTTAAAATTGAAGTCTGCAATGATGTCCCTACCAATATTGGCTTTACCCAGTTTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGCTTTGGAGTGGGGGCTGTGTTAGTTCAATCAAAGAGACCCATTGCCTTCTATAGTCATACACTATCTCCATGA

mRNA sequence

ATGGAAAAACTAGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCTTTTTCAAGCCCAGTACTGCTGGTTAAAAAGAAAGATGGCAGTTGGCGTTTCTGTGTCGATTACCGTGCAGTAAACAACGCTACAATTCCGGATAAATTCCCAATACCAGTGGTTGAAGAACTATTTGATGAGTTAAATGGTGCAACCGTGTTCTCAAAGATAGACCTCAAGTCAGGATATCATCAAATAAGAATGGTTGATGAGGATATTCCAAAAACGGCTTTTCGTACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCTCCTGCCACTTTTCAAGCCTTGATGAATAACATTTTTAGACCATTTTTGAGAAAATTTGTTTTGGTCTTCTTCGACGATATCCTGATCTGCAGCAAAAATGAGAAGGACCACGTAGAGCATATTGAAAAGGTCTTCCTCACATTAAGAAGACATGCCTTATTCGCCAATAAAAAAAAGTGTAATTTCGGTCAGCAAAAGATTGAATATTTGGGGCATGTCATATCAGGGGAAGGAGTAGAAGTAGACTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTCCGGGGATTCCTTGGATTAACAGGCTACTATAGGAGATTCGTCCAACATTATGGGTCGATAGCTGCCCCTTTAACTCAACTCCTTAAAAAGGGTGGATTTAAATGGAGTGAAGAATCCGAAAAAGCCTTCTTAAAATTGAAGTCTGCAATGATGTCCCTACCAATATTGGCTTTACCCAGTTTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGCTTTGGAGTGGGGGCTGTGTTAGTTCAATCAAAGAGACCCATTGCCTTCTATAGTCATACACTATCTCCATGA

Coding sequence (CDS)

ATGGAAAAACTAGTGGAGGAAATGCTAACTTCAGGGATTATTAGGCCAAGTAATAGCCCTTTTTCAAGCCCAGTACTGCTGGTTAAAAAGAAAGATGGCAGTTGGCGTTTCTGTGTCGATTACCGTGCAGTAAACAACGCTACAATTCCGGATAAATTCCCAATACCAGTGGTTGAAGAACTATTTGATGAGTTAAATGGTGCAACCGTGTTCTCAAAGATAGACCTCAAGTCAGGATATCATCAAATAAGAATGGTTGATGAGGATATTCCAAAAACGGCTTTTCGTACTCATGAAGGTCATTACGAGTTTCTTGTTATGCCGTTTGGATTAACCAACGCTCCTGCCACTTTTCAAGCCTTGATGAATAACATTTTTAGACCATTTTTGAGAAAATTTGTTTTGGTCTTCTTCGACGATATCCTGATCTGCAGCAAAAATGAGAAGGACCACGTAGAGCATATTGAAAAGGTCTTCCTCACATTAAGAAGACATGCCTTATTCGCCAATAAAAAAAAGTGTAATTTCGGTCAGCAAAAGATTGAATATTTGGGGCATGTCATATCAGGGGAAGGAGTAGAAGTAGACTCTGAAAAAATCAAAGCAGTTGCGGATTGGCCATGCCCAACAAACATAAAAGAAGTCCGGGGATTCCTTGGATTAACAGGCTACTATAGGAGATTCGTCCAACATTATGGGTCGATAGCTGCCCCTTTAACTCAACTCCTTAAAAAGGGTGGATTTAAATGGAGTGAAGAATCCGAAAAAGCCTTCTTAAAATTGAAGTCTGCAATGATGTCCCTACCAATATTGGCTTTACCCAGTTTTGAACTTCCCTTTGAAATAGAAACAGATGCGTCCGGCTTTGGAGTGGGGGCTGTGTTAGTTCAATCAAAGAGACCCATTGCCTTCTATAGTCATACACTATCTCCATGA

Protein sequence

MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKRPIAFYSHTLSP

Homology

[Close]

BLAST of Cmc07g0192661 vs. NCBI nr
Match: KAA0053432.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 639.0 bits (1647), Expect = 2.1e-179
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
Sbjct: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK
Sbjct: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR
Sbjct: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300

Query: 301 PIAFYSHTLSP 312
           PIAFYSHTLSP
Sbjct: 301 PIAFYSHTLSP 311

[Close]

BLAST of Cmc07g0192661 vs. NCBI nr
Match: TYK02195.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 601.3 bits (1549), Expect = 4.8e-168
Identity = 285/310 (91.94%), Postives = 303/310 (97.74%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 654 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 713

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 714 LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 773

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 774 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 833

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 834 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 893

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+QSKR
Sbjct: 894 QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 953

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 954 PIAFYSHTLS 963

[Close]

BLAST of Cmc07g0192661 vs. NCBI nr
Match: TYK23779.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 596.3 bits (1536), Expect = 1.5e-166
Identity = 281/310 (90.65%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNNATIPDKFPIPV EE
Sbjct: 564 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEE 623

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGAT+FSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAP TFQA
Sbjct: 624 LFDELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQA 683

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 684 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 743

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIK VADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 744 VEYLGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 803

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+QSKR
Sbjct: 804 QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 863

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 864 PIAFYSHTLS 873

[Close]

BLAST of Cmc07g0192661 vs. NCBI nr
Match: KAA0037097.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 595.1 bits (1533), Expect = 3.4e-166
Identity = 282/310 (90.97%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 559 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 618

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 619 LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 678

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 679 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 738

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDS+KIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 739 VEYLGHIISGEGVEVDSKKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 798

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E+++++F KLKSAMMSLP LALP+F LPFEIETDASGFGV AVL+QSKR
Sbjct: 799 QLLKKGGFKWNEDAKESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVEAVLIQSKR 858

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 859 PIAFYSHTLS 868

[Close]

BLAST of Cmc07g0192661 vs. NCBI nr
Match: KAA0032310.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 590.9 bits (1522), Expect = 6.5e-165
Identity = 280/310 (90.32%), Postives = 301/310 (97.10%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 244 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 303

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFD+LNGATVFSKIDLKS YHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 304 LFDKLNGATVFSKIDLKSRYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 363

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFL KFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 364 LMNSIFRPFLIKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 423

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 424 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 483

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW++++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+Q+KR
Sbjct: 484 QLLKKGGFKWNKDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQAKR 543

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 544 PIAFYSHTLS 553

[Close]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.6e-78
Identity = 148/317 (46.69%), Postives = 204/317 (64.35%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKD-----GSWRFCVDYRAVNNATIPDKFPI 60
           +E  V+EML  G+IR SNSP++SP  +V KK        +R  +DYR +N  TIPD++PI
Sbjct: 222 VENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPI 281

Query: 61  PVVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAP 120
           P ++E+  +L     F+ IDL  G+HQI M +E I KTAF T  GHYE+L MPFGL NAP
Sbjct: 282 PNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAP 341

Query: 121 ATFQALMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCN 180
           ATFQ  MNNI RP L K  LV+ DDI+I S +  +H+  I+ VF  L    L     KC 
Sbjct: 342 ATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCE 401

Query: 181 FGQQKIEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSI 240
           F +++  +LGH+++ +G++ +  K+KA+  +P PT  KE+R FLGLTGYYR+F+ +Y  I
Sbjct: 402 FLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADI 461

Query: 241 AAPLTQLLKKGGFKWSEESE--KAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGA 300
           A P+T  LKK     +++ E  +AF KLK+ ++  PIL LP FE  F + TDAS   +GA
Sbjct: 462 AKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGA 521

Query: 301 VLVQSKRPIAFYSHTLS 311
           VL Q+  PI+F S TL+
Sbjct: 522 VLSQNGHPISFISRTLN 538

[Close]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.5e-74
Identity = 140/317 (44.16%), Postives = 202/317 (63.72%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLV-KKKDGS----WRFCVDYRAVNNATIPDKFPI 60
           +E  +++ML  GIIR SNSP++SP+ +V KK+D S    +R  +DYR +N  T+ D+ PI
Sbjct: 223 VESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPI 282

Query: 61  PVVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAP 120
           P ++E+  +L     F+ IDL  G+HQI M  E + KTAF T  GHYE+L MPFGL NAP
Sbjct: 283 PNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAP 342

Query: 121 ATFQALMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCN 180
           ATFQ  MN+I RP L K  LV+ DDI++ S +  +H++ +  VF  L +  L     KC 
Sbjct: 343 ATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCE 402

Query: 181 FGQQKIEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSI 240
           F +Q+  +LGHV++ +G++ + EKI+A+  +P PT  KE++ FLGLTGYYR+F+ ++  I
Sbjct: 403 FLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADI 462

Query: 241 AAPLTQLLKKGG--FKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGA 300
           A P+T+ LKK       + E + AF KLK  +   PIL +P F   F + TDAS   +GA
Sbjct: 463 AKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGA 522

Query: 301 VLVQSKRPIAFYSHTLS 311
           VL Q   P+++ S TL+
Sbjct: 523 VLSQDGHPLSYISRTLN 539

[Close]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 134/331 (40.48%), Postives = 208/331 (62.84%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKK-----DGSWRFCVDYRAVNNATIPDKFPI 60
           +E+ ++E+L  GIIRPSNSP++SP+ +V KK     +  +R  VD++ +N  TIPD +PI
Sbjct: 139 VERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPI 198

Query: 61  PVVEELFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAP 120
           P +      L  A  F+ +DL SG+HQI M + DIPKTAF T  G YEFL +PFGL NAP
Sbjct: 199 PDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAP 258

Query: 121 ATFQALMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCN 180
           A FQ ++++I R  + K   V+ DDI++ S++   H +++  V  +L +  L  N +K +
Sbjct: 259 AIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSH 318

Query: 181 FGQQKIEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSI 240
           F   ++E+LG++++ +G++ D +K++A+++ P PT++KE++ FLG+T YYR+F+Q Y  +
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378

Query: 241 AAPLTQLLK--KGGFKWSEESE----------KAFLKLKSAMMSLPILALPSFELPFEIE 300
           A PLT L +      K S+ S+          ++F  LKS + S  ILA P F  PF + 
Sbjct: 379 AKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLT 438

Query: 301 TDASGFGVGAVLVQS----KRPIAFYSHTLS 311
           TDAS + +GAVL Q      RPIA+ S +L+
Sbjct: 439 TDASNWAIGAVLSQDDQGRDRPIAYISRSLN 469

[Close]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 256.5 bits (654), Expect = 3.8e-67
Identity = 128/295 (43.39%), Postives = 187/295 (63.39%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           + K+V+++L +  I PS SP SSPV+LV KKDG++R CVDYR +N ATI D FP+P ++ 
Sbjct: 638 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 697

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           L   +  A +F+ +DL SGYHQI M  +D  KTAF T  G YE+ VMPFGL NAP+TF  
Sbjct: 698 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 757

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
            M + FR    +FV V+ DDILI S++ ++H +H++ V   L+   L   KKKC F  ++
Sbjct: 758 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 817

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
            E+LG+ I  + +     K  A+ D+P P  +K+ + FLG+  YYRRF+ +   IA P+ 
Sbjct: 818 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI- 877

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVL 296
           QL      +W+E+ +KA  KLK+A+ + P+L   + +  + + TDAS  G+GAVL
Sbjct: 878 QLFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 929

[Close]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 255.8 bits (652), Expect = 6.5e-67
Identity = 128/295 (43.39%), Postives = 186/295 (63.05%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           + K+V+++L +  I PS SP SSPV+LV KKDG++R CVDYR +N ATI D FP+P ++ 
Sbjct: 612 INKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDN 671

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           L   +  A +F+ +DL SGYHQI M  +D  KTAF T  G YE+ VMPFGL NAP+TF  
Sbjct: 672 LLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFAR 731

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
            M + FR    +FV V+ DDILI S++ ++H +H++ V   L+   L   KKKC F  ++
Sbjct: 732 YMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEE 791

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
            E+LG+ I  + +     K  A+ D+P P  +K+ + FLG+  YYRRF+ +   IA P+ 
Sbjct: 792 TEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI- 851

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVL 296
           QL      +W+E+ +KA  KLK A+ + P+L   + +  + + TDAS  G+GAVL
Sbjct: 852 QLFICDKSQWTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVL 903

[Close]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL
Match: A0A5A7UCF9 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G001030 PE=4 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.0e-179
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE
Sbjct: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK
Sbjct: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR
Sbjct: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300

Query: 301 PIAFYSHTLSP 312
           PIAFYSHTLSP
Sbjct: 301 PIAFYSHTLSP 311

[Close]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL
Match: A0A5D3BSP2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00980 PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.3e-168
Identity = 285/310 (91.94%), Postives = 303/310 (97.74%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 654 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 713

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 714 LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 773

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 774 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 833

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 834 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 893

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+QSKR
Sbjct: 894 QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 953

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 954 PIAFYSHTLS 963

[Close]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL
Match: A0A5D3DKH5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G001060 PE=4 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 7.5e-167
Identity = 281/310 (90.65%), Postives = 300/310 (96.77%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYR VNNATIPDKFPIPV EE
Sbjct: 564 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRTVNNATIPDKFPIPVAEE 623

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGAT+FSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAP TFQA
Sbjct: 624 LFDELNGATIFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPTTFQA 683

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 684 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 743

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIK VADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 744 VEYLGHIISGEGVEVDSEKIKVVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 803

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+QSKR
Sbjct: 804 QLLKKGGFKWNEDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQSKR 863

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 864 PIAFYSHTLS 873

[Close]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL
Match: A0A5A7T6B1 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G002030 PE=4 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.7e-166
Identity = 282/310 (90.97%), Postives = 302/310 (97.42%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 559 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 618

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFDELNGATVFSKIDLKSGYHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 619 LFDELNGATVFSKIDLKSGYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 678

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFLRKFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 679 LMNSIFRPFLRKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 738

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDS+KIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 739 VEYLGHIISGEGVEVDSKKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 798

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW+E+++++F KLKSAMMSLP LALP+F LPFEIETDASGFGV AVL+QSKR
Sbjct: 799 QLLKKGGFKWNEDAKESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVEAVLIQSKR 858

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 859 PIAFYSHTLS 868

[Close]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL
Match: A0A5A7SNE3 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G001630 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 3.1e-165
Identity = 280/310 (90.32%), Postives = 301/310 (97.10%), Query Frame = 0


Query: 1   MEKLVEEMLTSGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVVEE 60
           ME+LVEEML SGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPV EE
Sbjct: 244 MERLVEEMLASGIIRPSNSPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPIPVAEE 303

Query: 61  LFDELNGATVFSKIDLKSGYHQIRMVDEDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 120
           LFD+LNGATVFSKIDLKS YHQIRM+D+DIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA
Sbjct: 304 LFDKLNGATVFSKIDLKSRYHQIRMIDKDIPKTAFRTHEGHYEFLVMPFGLTNAPATFQA 363

Query: 121 LMNNIFRPFLRKFVLVFFDDILICSKNEKDHVEHIEKVFLTLRRHALFANKKKCNFGQQK 180
           LMN+IFRPFL KFVLVFFDDILI SKNEKDH+EHIEKVFL LR+H+LFANKKKCNFGQ+K
Sbjct: 364 LMNSIFRPFLIKFVLVFFDDILIYSKNEKDHIEHIEKVFLALRKHSLFANKKKCNFGQKK 423

Query: 181 IEYLGHVISGEGVEVDSEKIKAVADWPCPTNIKEVRGFLGLTGYYRRFVQHYGSIAAPLT 240
           +EYLGH+ISGEGVEVDSEKIKAVADWPCPTNI+EVRGFLGLTGYYRRFVQHYGSIAAPLT
Sbjct: 424 VEYLGHIISGEGVEVDSEKIKAVADWPCPTNIREVRGFLGLTGYYRRFVQHYGSIAAPLT 483

Query: 241 QLLKKGGFKWSEESEKAFLKLKSAMMSLPILALPSFELPFEIETDASGFGVGAVLVQSKR 300
           QLLKKGGFKW++++E++F KLKSAMMSLP LALP+F LPFEIETDASGFGVGAVL+Q+KR
Sbjct: 484 QLLKKGGFKWNKDAEESFRKLKSAMMSLPTLALPNFTLPFEIETDASGFGVGAVLIQAKR 543

Query: 301 PIAFYSHTLS 311
           PIAFYSHTLS
Sbjct: 544 PIAFYSHTLS 553

[Close]

BLAST of Cmc07g0192661 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 9.4e-37
Identity = 71/131 (54.20%), Postives = 91/131 (69.47%), Query Frame = 0


Query: 152 VEHIEKVFLTLRRHALFANKKKCNFGQQKIEYLG--HVISGEGVEVDSEKIKAVADWPCP 211
           + H+  V     +H  +AN+KKC FGQ +I YLG  H+ISGEGV  D  K++A+  WP P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 212 TNIKEVRGFLGLTGYYRRFVQHYGSIAAPLTQLLKKGGFKWSEESEKAFLKLKSAMMSLP 271
            N  E+RGFLGLTGYYRRFV++YG I  PLT+LLKK   KW+E +  AF  LK A+ +LP
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLP 120

Query: 272 ILALPSFELPF 281
           +LALP  +LPF
Sbjct: 121 VLALPDLKLPF 131

[Close]

BLAST of Cmc07g0192661 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-05
Identity = 21/29 (72.41%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 7  EMLTSGIIRPSNSPFSSPVLLVKKKDGSW 36
          EML + II+PS SP+SSPVLLV+KKDG W
Sbjct: 51 EMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc07g0192661 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053432.1	2.1e-179	100.00	Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]	[more]
TYK02195.1	4.8e-168	91.94	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK23779.1	1.5e-166	90.65	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0037097.1	3.4e-166	90.97	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0032310.1	6.5e-165	90.32	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.6e-78	46.69	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	5.5e-74	44.16	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.9e-71	40.48	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	3.8e-67	43.39	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	6.5e-67	43.39	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc07g0192661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UCF9	1.0e-179	100.00	Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BSP2	2.3e-168	91.94	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DKH5	7.5e-167	90.65	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T6B1	1.7e-166	90.97	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SNE3	3.1e-165	90.32	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc07g0192661 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	9.4e-37	54.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	2.5e-05	72.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 250..311 e-value: 1.2E-18 score: 66.9
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 28..187 e-value: 1.0E-31 score: 110.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 9..188 score: 16.829229
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..113 e-value: 1.2E-85 score: 288.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 8..310
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 8..310
None	No IPR available	CDD	cd01647	RT_LTR	coord: 12..188 e-value: 1.04892E-100 score: 291.421
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 53..188 e-value: 1.2E-85 score: 288.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 197..284 e-value: 2.8E-29 score: 102.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192661.1	Cmc07g0192661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity