Cmc07g0192401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	50S ribosomal protein L23
Location	CMiso1.1chr07: 13133133 .. 13134197 (+)
RNA-Seq Expression	Cmc07g0192401
Synteny	Cmc07g0192401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCTGTCTACGACCGCTATTATCTCAGCACAAGACCTAACAATCCCAGCACTGCACCTCGCCGTTCGGTCCCAAATCCCTTCAGTTCGTTGAAAGCTTGCAAGTACAAATCTACTATTCTCAGGTTTGATTCCATTGTGAACCTCCCGTGTTTCAAGTAACTGTTTAGATCTTGGTTTCTCGTTCTTGTTGGGTTTGATTTGATGTTGTTTCAAGCAGATTGGAGTTAGAATTTGTAATTGGGTTTTCAAAGGATCTGTTCATCGGCTGTTCATTCGACGCGGAAGCCAAGAAATCCAGGAACATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCACTCCTTCTGCTTCTAAAATTGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTCAGGTCGATAAAGTTCGAACTCTTAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGATTTTGATCGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGAAATCCTTTGTCAATCTCTCAGGACATGTACCCGATCCGCATTATAGAGGAGGATAAGAGGAATATGAACAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCAAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTGGGAATCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGGCGCTGAAACGGTTGAGCCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAGTGGTAGTGTGAAGAAACGTATCTCAGTTACTTCCTAATTGTCATTTGGTTTGGATTTTGTTTTCCTCTAAATGATAATAGTGCATTAGGTTGGTGATGGCTTTGAGCTTACTGATAAATGTTTATTTTCTAACTATGAAATGAACTTCTTGGCCCTCCTATGGGATTTTTTTCTGGAGGAAGTTCTGTTTTGTTGATTGAATCAATAAATAAATTAGAGTTGCATTTGTATTATTC

mRNA sequence

ACCCTGTCTACGACCGCTATTATCTCAGCACAAGACCTAACAATCCCAGCACTGCACCTCGCCGTTCGGTCCCAAATCCCTTCAGTTCGTTGAAAGCTTGCAAGTACAAATCTACTATTCTCAGATTGGAGTTAGAATTTGTAATTGGGTTTTCAAAGGATCTGTTCATCGGCTGTTCATTCGACGCGGAAGCCAAGAAATCCAGGAACATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCACTCCTTCTGCTTCTAAAATTGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTCAGGTCGATAAAGTTCGAACTCTTAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGATTTTGATCGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGAAATCCTTTGTCAATCTCTCAGGACATGTACCCGATCCGCATTATAGAGGAGGATAAGAGGAATATGAACAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCAAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTGGGAATCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGGCGCTGAAACGGTTGAGCCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAGTGGTAGTGTGAAGAAACGTATCTCAGTTACTTCCTAATTGTCATTTGGTTTGGATTTTGTTTTCCTCTAAATGATAATAGTGCATTAGGTTGGTGATGGCTTTGAGCTTACTGATAAATGTTTATTTTCTAACTATGAAATGAACTTCTTGGCCCTCCTATGGGATTTTTTTCTGGAGGAAGTTCTGTTTTGTTGATTGAATCAATAAATAAATTAGAGTTGCATTTGTATTATTC

Coding sequence (CDS)

ATGGGAAGCAGACTCGGGAGAAGAGTTGTTCACTTCGCAAATCTTCCAATCAAGCTTCTTATGCCTACCTCCTTCACCAACATCACTGAAATTGCTCTTAAAACCACTCCTTCTGCTTCTAAAATTGAAATCAAGCGCGTCCTTGAGAGCCTTTACGGCTTTCAGGTCGATAAAGTTCGAACTCTTAACATGGAGGGGAAGAAAAAGAAGCGTGGAGGGATTTTGATCGCAAAGCCTGATTACAAGAAGGCCTATGTTACTCTCAGAAATCCTTTGTCAATCTCTCAGGACATGTACCCGATCCGCATTATAGAGGAGGATAAGAGGAATATGAACAAACAGTCTAAGTCCAGCATTGTTGAGGAGGGCGAGGCAAAGAGGCATTGGCTGCATGAGAAAGAGCCTGTGGGAATCAAAACTTACAAGGGTTTTGCTGATAGAGGCCGCCGACGAATTGGCGGCGGCGCTGAAACGGTTGAGCCATCAACTAAGTTTCCTTGGAGTAGCATGAGGTCTGGTAGGTAG

Protein sequence

MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIVEEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR

Homology

[Close]

BLAST of Cmc07g0192401 vs. NCBI nr
Match: KAA0053397.1 (Nucleotide-binding, alpha-beta plait [Cucumis melo var. makuwa])

HSP 1 Score: 344.0 bits (881), Expect = 7.7e-91
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR
Sbjct: 76  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 135

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 136 TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 195

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 196 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 249

[Close]

BLAST of Cmc07g0192401 vs. NCBI nr
Match: TYK15876.1 (Nucleotide-binding, alpha-beta plait [Cucumis melo var. makuwa])

HSP 1 Score: 341.7 bits (875), Expect = 3.8e-90
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 76  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 135

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 136 TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 195

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 196 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 249

[Close]

BLAST of Cmc07g0192401 vs. NCBI nr
Match: XP_008455593.1 (PREDICTED: uncharacterized protein LOC103495731 isoform X1 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 3.8e-90
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 174

[Close]

BLAST of Cmc07g0192401 vs. NCBI nr
Match: XP_016901794.1 (PREDICTED: uncharacterized protein LOC103495731 isoform X2 [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG 174
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG 173

[Close]

BLAST of Cmc07g0192401 vs. NCBI nr
Match: XP_004137193.1 (uncharacterized protein LOC101221365 [Cucumis sativus] >KGN53646.1 hypothetical protein Csa_014646 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.4e-87
Identity = 168/174 (96.55%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGF+VDKV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSIS DMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAK+HWLHEKEPVGIKTYKGFADRGRRR GGGAETVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKKHWLHEKEPVGIKTYKGFADRGRRRSGGGAETVEPSTKFPWSSMRSGR 174

[Close]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot
Match: Q605B4 (50S ribosomal protein L23 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) OX=243233 GN=rplW PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.2e-07
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0


Query: 30 EIALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDYKKAYVTLR 89
          +   +  P+ASK++IK  +E ++G +VD VR LN++GK K+ G  +  + D+KKAYV L+
Sbjct: 28 QFVFRVKPAASKLQIKSAVELMFGVKVDSVRILNVKGKSKRFGRFMGQRSDWKKAYVKLK 87

[Close]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot
Match: Q0I161 (50S ribosomal protein L23 OS=Haemophilus somnus (strain 129Pt) OX=205914 GN=rplW PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-06
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 26 TNITE----IALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDY 85
          TN TE    I  K    A+K+EI   +E L+  +VD VRT+ ++GK K+RG  +  + D+
Sbjct: 21 TNNTEKSNTIVFKVALDANKVEIANAVEQLFEVKVDSVRTVVVKGKTKRRGAKMGQRSDW 80

Query: 86 KKAYVTLRNPLSI 95
          KKAYVTL+   S+
Sbjct: 81 KKAYVTLQEGQSL 93

[Close]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot
Match: P55839 (50S ribosomal protein L23 OS=Aggregatibacter actinomycetemcomitans OX=714 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0


Query: 31 IALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDYKKAYVTLRN 90
          I  K    A+K+EI   +E L+  +VD VRT+ ++GK K+RG  +  + D+KKAYVTL+ 
Sbjct: 29 IVFKVALDANKVEITNAVEQLFEVKVDSVRTVVVKGKTKRRGAKIGRRSDWKKAYVTLQE 88

Query: 91 PLSI 95
            S+
Sbjct: 89 GQSL 92

[Close]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot
Match: Q0ABH3 (50S ribosomal protein L23 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 30 EIALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDYKKAYVTL 89
          E+  K    A K EI++ +E L+  +V  VRT+ M+GK+K+ G +   +PD+KKAYVTL
Sbjct: 28 EVVFKVAVDARKAEIRQAVEQLFDVKVRDVRTVKMKGKRKRFGRLEGKRPDWKKAYVTL 86

[Close]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot
Match: A1WVC0 (50S ribosomal protein L23 OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=rplW PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-06
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 0


Query: 30 EIALKTTPSASKIEIKRVLESLYGFQVDKVRTLNMEGKKKKRGGILIAKPDYKKAYVTL 89
          ++  +  P A+K EIK  +E L+  QV  VRT+N +GK+K+ G I   + D+KKAYVTL
Sbjct: 28 QVVFQVAPDANKKEIKAAVEKLFDVQVTGVRTVNAKGKRKRFGMIRGRRRDWKKAYVTL 86

[Close]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL
Match: A0A5A7UFX6 (Nucleotide-binding, alpha-beta plait OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00630 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 3.7e-91
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR
Sbjct: 76  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 135

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 136 TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 195

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 196 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 249

[Close]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL
Match: A0A5D3CZJ7 (Nucleotide-binding, alpha-beta plait OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00540 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 76  MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 135

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 136 TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 195

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 196 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 249

[Close]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL
Match: A0A1S3C191 (uncharacterized protein LOC103495731 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495731 PE=3 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90
Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 174

[Close]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL
Match: A0A1S4E0P8 (uncharacterized protein LOC103495731 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495731 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 7.0e-90
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGFQVDKVR
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFQVDKVR 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG 174
           EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG
Sbjct: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSG 173

[Close]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL
Match: A0A0A0L0J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095560 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 6.6e-88
Identity = 168/174 (96.55%), Postives = 171/174 (98.28%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKT PSASKIEIKRVLESLYGF+VDKV+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSIS DMYPIRIIEEDKRNMNKQSKSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 121 EEGEAKRHWLHEKEPVGIKTYKGFADRGRRRIGGGAETVEPSTKFPWSSMRSGR 175
           EEGEAK+HWLHEKEPVGIKTYKGFADRGRRR GGGAETVEPSTKFPWSSMRSGR
Sbjct: 121 EEGEAKKHWLHEKEPVGIKTYKGFADRGRRRSGGGAETVEPSTKFPWSSMRSGR 174

[Close]

BLAST of Cmc07g0192401 vs. TAIR 10
Match: AT4G39880.1 (Ribosomal protein L23/L15e family protein )

HSP 1 Score: 205.3 bits (521), Expect = 4.0e-53
Identity = 113/175 (64.57%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTTPSASKIEIKRVLESLYGFQVDKVR 60
           MGSRLG RVVHFANLPIKLLMP   TNI E ALKT PSASKIEIKRVLESLYGF V+KV 
Sbjct: 1   MGSRLGGRVVHFANLPIKLLMPAKLTNIHEFALKTIPSASKIEIKRVLESLYGFDVEKVN 60

Query: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISQDMYPIRIIEEDKRNMNKQSKSSIV 120
           TLNM+GKKKKRGG+LIAK DYKKAYVTLR+PLSIS+D++P++ IEED+++  K S S + 
Sbjct: 61  TLNMDGKKKKRGGLLIAKADYKKAYVTLRSPLSISRDLFPVKYIEEDRKSKVKGS-SFVE 120

Query: 121 EEGEAKRHWLHEKEPVGIKTY-KGFADRGRRRIGG---GAETVEPSTKFPWSSMR 172
           EE + K HWL  KE   I  Y KG   RG  R      G      + KFPWS+MR
Sbjct: 121 EEDDKKSHWLDRKEKREIGGYGKGKGRRGGERANSPTRGGAAAAGTAKFPWSNMR 174

The following BLAST results are available for this feature:

BLAST of Cmc07g0192401 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053397.1	7.7e-91	100.00	Nucleotide-binding, alpha-beta plait [Cucumis melo var. makuwa]	[more]
TYK15876.1	3.8e-90	99.43	Nucleotide-binding, alpha-beta plait [Cucumis melo var. makuwa]	[more]
XP_008455593.1	3.8e-90	99.43	PREDICTED: uncharacterized protein LOC103495731 isoform X1 [Cucumis melo]	[more]
XP_016901794.1	1.5e-89	99.42	PREDICTED: uncharacterized protein LOC103495731 isoform X2 [Cucumis melo]	[more]
XP_004137193.1	1.4e-87	96.55	uncharacterized protein LOC101221365 [Cucumis sativus] >KGN53646.1 hypothetical ...	[more]

BLAST of Cmc07g0192401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q605B4	4.2e-07	41.67	50S ribosomal protein L23 OS=Methylococcus capsulatus (strain ATCC 33009 / NCIMB...	[more]
Q0I161	1.2e-06	42.47	50S ribosomal protein L23 OS=Haemophilus somnus (strain 129Pt) OX=205914 GN=rplW...	[more]
P55839	2.1e-06	42.19	50S ribosomal protein L23 OS=Aggregatibacter actinomycetemcomitans OX=714 GN=rpl...	[more]
Q0ABH3	2.1e-06	44.07	50S ribosomal protein L23 OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / D...	[more]
A1WVC0	2.1e-06	45.76	50S ribosomal protein L23 OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=...	[more]

BLAST of Cmc07g0192401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UFX6	3.7e-91	100.00	Nucleotide-binding, alpha-beta plait OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CZJ7	1.9e-90	99.43	Nucleotide-binding, alpha-beta plait OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C191	1.9e-90	99.43	uncharacterized protein LOC103495731 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E0P8	7.0e-90	99.42	uncharacterized protein LOC103495731 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L0J2	6.6e-88	96.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G095560 PE=3 SV=1	[more]

BLAST of Cmc07g0192401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39880.1	4.0e-53	64.57	Ribosomal protein L23/L15e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013025	Ribosomal protein L25/L23	PFAM	PF00276	Ribosomal_L23	coord: 29..90 e-value: 3.5E-16 score: 59.3
IPR013025	Ribosomal protein L25/L23	PANTHER	PTHR12059	RIBOSOMAL PROTEIN L23-RELATED	coord: 5..173
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..138 e-value: 1.2E-23 score: 85.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..174
None	No IPR available	PANTHER	PTHR12059:SF7	BNAC07G51330D PROTEIN	coord: 5..173
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 18..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192401.1	Cmc07g0192401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport
biological_process	GO:0006412	translation
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity
molecular_function	GO:0003735	structural constituent of ribosome