Cmc07g0192361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 13037263 .. 13037697 (-)
RNA-Seq Expression	Cmc07g0192361
Synteny	Cmc07g0192361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCTTATGCATTGACTATATAGAATTGAAAAAGGTGATTGTTAAGAACAAATATCCTCTGCCTAGGATTGATGATTTATTTGACCAGTCACAGGGAGCCACAATATTCTCTAAGATCGATCTTCGATCGGAATACCATCAATTGAGGATTAAGGACAGTGATATTTGGAAGACAACTTTTCGTTCGAGATATGAGCATTATAAGTTCACTATGATGTCTTTTGGGTTAACAAATGCTCCAACAGAATTCATGGACTTGATGAATAGAGTGTTTAAGAATTTCGTAGGCACTTTTATGATTGTATTTAACGATGATATCTTGGATTATTTCAAGGCAAAGATAGAGCATGAGGAGCATTTACGCATGGTAGTAGAAACTTTTCCTGAGTCAACAAATTGTATACAATGTTTTCATAATGTGAGTTTTTCCTGA

mRNA sequence

ATGCGCTTATGCATTGACTATATAGAATTGAAAAAGGTGATTGTTAAGAACAAATATCCTCTGCCTAGGATTGATGATTTATTTGACCAGTCACAGGGAGCCACAATATTCTCTAAGATCGATCTTCGATCGGAATACCATCAATTGAGGATTAAGGACAGTGATATTTGGAAGACAACTTTTCGTTCGAGATATGAGCATTATAAGTTCACTATGATGTCTTTTGGGTTAACAAATGCTCCAACAGAATTCATGGACTTGATGAATAGAGTGTTTAAGAATTTCGTAGGCACTTTTATGATTGTATTTAACGATGATATCTTGGATTATTTCAAGGCAAAGATAGAGCATGAGGAGCATTTACGCATGGTAGTAGAAACTTTTCCTGAGTCAACAAATTGTATACAATGTTTTCATAATGTGAGTTTTTCCTGA

Coding sequence (CDS)

ATGCGCTTATGCATTGACTATATAGAATTGAAAAAGGTGATTGTTAAGAACAAATATCCTCTGCCTAGGATTGATGATTTATTTGACCAGTCACAGGGAGCCACAATATTCTCTAAGATCGATCTTCGATCGGAATACCATCAATTGAGGATTAAGGACAGTGATATTTGGAAGACAACTTTTCGTTCGAGATATGAGCATTATAAGTTCACTATGATGTCTTTTGGGTTAACAAATGCTCCAACAGAATTCATGGACTTGATGAATAGAGTGTTTAAGAATTTCGTAGGCACTTTTATGATTGTATTTAACGATGATATCTTGGATTATTTCAAGGCAAAGATAGAGCATGAGGAGCATTTACGCATGGTAGTAGAAACTTTTCCTGAGTCAACAAATTGTATACAATGTTTTCATAATGTGAGTTTTTCCTGA

Protein sequence

MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTTFRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEHLRMVVETFPESTNCIQCFHNVSFS

Homology

[Close]

BLAST of Cmc07g0192361 vs. NCBI nr
Match: TYK20945.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 765 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTP 824

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F MMSFGLTNAPT FMDLMNRVF++F+ TF+IVF DDIL Y K ++EHEEH
Sbjct: 825 FRSRYGHYEFIMMSFGLTNAPTVFMDLMNRVFRDFLDTFVIVFIDDILIYSKTEVEHEEH 884

Query: 121 LRMVVETFPES 132
           LRMV++   ++
Sbjct: 885 LRMVLQALQDN 895

[Close]

BLAST of Cmc07g0192361 vs. NCBI nr
Match: KAA0041721.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 203.0 bits (515), Expect = 1.8e-48
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1    MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
            MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 897  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTP 956

Query: 61   FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
            FRSRY HY+F MMSFGLTNAPT FMDLMNRVF++F+ TF+IVF DDIL Y K ++EHEEH
Sbjct: 957  FRSRYGHYEFIMMSFGLTNAPTVFMDLMNRVFRDFLDTFVIVFIDDILIYSKTEVEHEEH 1016

Query: 121  LRMVVETFPES 132
            LRMV++   ++
Sbjct: 1017 LRMVLQALQDN 1027

[Close]

BLAST of Cmc07g0192361 vs. NCBI nr
Match: KAA0047130.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 2.3e-48
Identity = 99/131 (75.57%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKNKYPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KTT
Sbjct: 480 MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 539

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F +MSFGLTNAPT FMDLMNRVF+ F+ TF+IVF DDIL Y K + EHEEH
Sbjct: 540 FRSRYGHYEFIVMSFGLTNAPTMFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEH 599

Query: 121 LRMVVETFPES 132
           LR+V++T  ++
Sbjct: 600 LRIVLQTLRDN 610

[Close]

BLAST of Cmc07g0192361 vs. NCBI nr
Match: KAA0065812.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ96550.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FS IDLRS YHQLRIKD+D+ KTT
Sbjct: 351 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSMIDLRSGYHQLRIKDADVPKTT 410

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F +MSFGLTNAP  FMDLMNRVFK F+GTF+IVF DDIL Y K + EH+EH
Sbjct: 411 FRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKEFLGTFVIVFIDDILIYSKTETEHDEH 470

Query: 121 LRMVVETFPES 132
           LRMV++T  ++
Sbjct: 471 LRMVLQTLRDN 481

[Close]

BLAST of Cmc07g0192361 vs. NCBI nr
Match: KAA0037385.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48
Identity = 97/131 (74.05%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 560 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 619

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           F SRY HY+F +MSFGLTNAP  FMDLMNRVF+ F+ TF+IVF DDIL YFK ++EHEEH
Sbjct: 620 FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEVEHEEH 679

Query: 121 LRMVVETFPES 132
           LRMV++T  ++
Sbjct: 680 LRMVLQTLRDN 690

[Close]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26
Identity = 63/130 (48.46%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           +R+CIDY  L KV +KNKYP+PR+DDLFD+   AT F+K+DLRS Y Q+RI   D  KTT
Sbjct: 6   LRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKTT 65

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDIL---DYFKAKIEH 120
             +RY  ++F +M FGLTNA   F +LMN V   ++  F++V+ DD++    Y  +  EH
Sbjct: 66  CVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHEH 125

Query: 121 EEHLRMVVET 128
            +HLR+V E+
Sbjct: 126 IKHLRVVRES 135

[Close]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 2   RLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTTF 61
           RLC+DY  L K  + + +PLPRID+L  +   A IF+ +DL S YHQ+ ++  D +KT F
Sbjct: 647 RLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAF 706

Query: 62  RSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEHL 121
            +    Y++T+M FGL NAP+ F   M   F++    F+ V+ DDIL + ++  EH +HL
Sbjct: 707 VTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHL 766

Query: 122 RMVVE 127
             V+E
Sbjct: 767 DTVLE 769

[Close]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 2   RLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTTF 61
           RLC+DY  L K  + + +PLPRID+L  +   A IF+ +DL S YHQ+ ++  D +KT F
Sbjct: 673 RLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAF 732

Query: 62  RSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEHL 121
            +    Y++T+M FGL NAP+ F   M   F++    F+ V+ DDIL + ++  EH +HL
Sbjct: 733 VTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHL 792

Query: 122 RMVVE 127
             V+E
Sbjct: 793 DTVLE 795

[Close]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           +R+ +DY  L K +  N YPLP I+ L  + QG+TIF+K+DL+S YH +R++  D  K  
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FR     +++ +M +G++ AP  F   +N +      + ++ + DDIL + K++ EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRMVVE 127
           ++ V++
Sbjct: 582 VKDVLQ 587

[Close]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.4e-18
Identity = 43/126 (34.13%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           +R+ +DY  L K +  N YPLP I+ L  + QG+TIF+K+DL+S YH +R++  D  K  
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FR     +++ +M +G++ AP  F   +N +      + ++ + DDIL + K++ EH +H
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 LRMVVE 127
           ++ V++
Sbjct: 582 VKDVLQ 587

[Close]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL
Match: A0A5D3DBK1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold284G00930 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.5e-49
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 765 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTP 824

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F MMSFGLTNAPT FMDLMNRVF++F+ TF+IVF DDIL Y K ++EHEEH
Sbjct: 825 FRSRYGHYEFIMMSFGLTNAPTVFMDLMNRVFRDFLDTFVIVFIDDILIYSKTEVEHEEH 884

Query: 121 LRMVVETFPES 132
           LRMV++   ++
Sbjct: 885 LRMVLQALQDN 895

[Close]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL
Match: A0A5A7TJC6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00570 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 8.5e-49
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1    MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
            MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 897  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTP 956

Query: 61   FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
            FRSRY HY+F MMSFGLTNAPT FMDLMNRVF++F+ TF+IVF DDIL Y K ++EHEEH
Sbjct: 957  FRSRYGHYEFIMMSFGLTNAPTVFMDLMNRVFRDFLDTFVIVFIDDILIYSKTEVEHEEH 1016

Query: 121  LRMVVETFPES 132
            LRMV++   ++
Sbjct: 1017 LRMVLQALQDN 1027

[Close]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL
Match: A0A5A7TVD9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold466G001180 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48
Identity = 99/131 (75.57%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKNKYPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KTT
Sbjct: 480 MRLCIDYRELNKVTVKNKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 539

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F +MSFGLTNAPT FMDLMNRVF+ F+ TF+IVF DDIL Y K + EHEEH
Sbjct: 540 FRSRYGHYEFIVMSFGLTNAPTMFMDLMNRVFREFLDTFVIVFIDDILIYSKMEAEHEEH 599

Query: 121 LRMVVETFPES 132
           LR+V++T  ++
Sbjct: 600 LRIVLQTLRDN 610

[Close]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL
Match: A0A5A7VBX6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002080 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 98/131 (74.81%), Postives = 112/131 (85.50%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FS IDLRS YHQLRIKD+D+ KTT
Sbjct: 351 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSMIDLRSGYHQLRIKDADVPKTT 410

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           FRSRY HY+F +MSFGLTNAP  FMDLMNRVFK F+GTF+IVF DDIL Y K + EH+EH
Sbjct: 411 FRSRYGHYEFIVMSFGLTNAPVVFMDLMNRVFKEFLGTFVIVFIDDILIYSKTETEHDEH 470

Query: 121 LRMVVETFPES 132
           LRMV++T  ++
Sbjct: 471 LRMVLQTLRDN 481

[Close]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL
Match: A0A5A7T7E7 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold278G00920 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48
Identity = 97/131 (74.05%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 1   MRLCIDYIELKKVIVKNKYPLPRIDDLFDQSQGATIFSKIDLRSEYHQLRIKDSDIWKTT 60
           MRLCIDY EL KV VKN+YPLPRIDDLFDQ QGAT+FSKIDLRS YHQLRIKD D+ KT 
Sbjct: 560 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 619

Query: 61  FRSRYEHYKFTMMSFGLTNAPTEFMDLMNRVFKNFVGTFMIVFNDDILDYFKAKIEHEEH 120
           F SRY HY+F +MSFGLTNAP  FMDLMNRVF+ F+ TF+IVF DDIL YFK ++EHEEH
Sbjct: 620 FHSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYFKTEVEHEEH 679

Query: 121 LRMVVETFPES 132
           LRMV++T  ++
Sbjct: 680 LRMVLQTLRDN 690

The following BLAST results are available for this feature:

BLAST of Cmc07g0192361 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK20945.1	1.8e-48	74.81	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0041721.1	1.8e-48	74.81	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0047130.1	2.3e-48	75.57	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0065812.1	3.0e-48	74.81	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ96550.1 ty3-gyp...	[more]
KAA0037385.1	3.0e-48	74.05	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P31843	1.5e-26	48.46	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
Q99315	1.0e-19	40.80	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.0e-19	40.80	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	3.4e-18	34.13	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.4e-18	34.13	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DBK1	8.5e-49	74.81	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TJC6	8.5e-49	74.81	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TVD9	1.1e-48	75.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]
A0A5A7VBX6	1.5e-48	74.81	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T7E7	1.5e-48	74.05	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc07g0192361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 1.2E-43 score: 150.9
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 2..100
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..100
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..126 e-value: 7.41265E-47 score: 147.742
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..130 e-value: 1.2E-43 score: 150.9
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..131 e-value: 8.0E-12 score: 45.2
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192361.1	Cmc07g0192361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding