Cmc07g0192321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 12996618 .. 12997046 (-)
RNA-Seq Expression	Cmc07g0192321
Synteny	Cmc07g0192321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTTGGTCTCACCAATGCCCCTGCAACCTTCTGTACGTTGATGAACCAGGTCTTCCATGAATATCTCGATGAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCAGAATTGGAATGGAAGAAGGGAAGATTGTTGCGATACGCGACTGGGCAGTGTCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGCCGATTTGTCGAGGGATTCTTCAAACGAGCAAGCTCGCTGACTGAACTACTGAAAAAAGACGTTCACTGA

mRNA sequence

ATGCCATTTGGTCTCACCAATGCCCCTGCAACCTTCTGTACGTTGATGAACCAGGTCTTCCATGAATATCTCGATGAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCAGAATTGGAATGGAAGAAGGGAAGATTGTTGCGATACGCGACTGGGCAGTGTCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGCCGATTTGTCGAGGGATTCTTCAAACGAGCAAGCTCGCTGACTGAACTACTGAAAAAAGACGTTCACTGA

Coding sequence (CDS)

ATGCCATTTGGTCTCACCAATGCCCCTGCAACCTTCTGTACGTTGATGAACCAGGTCTTCCATGAATATCTCGATGAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTGCACAAGAGCAGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCAGAATTGGAATGGAAGAAGGGAAGATTGTTGCGATACGCGACTGGGCAGTGTCGAAATCAGTCTCGGAGTTACGCTCCTTCCTCGGGCTGGCAAATTACTATCGCCGATTTGTCGAGGGATTCTTCAAACGAGCAAGCTCGCTGACTGAACTACTGAAAAAAGACGTTCACTGA

Protein sequence

MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYRRFVEGFFKRASSLTELLKKDVH

Homology

[Close]

BLAST of Cmc07g0192321 vs. NCBI nr
Match: KAA0053383.1 (uncharacterized protein E6C27_scaffold428G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 4.1e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 187 MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 246

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR
Sbjct: 247 LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 306

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGFFKRASSLTELLKKDVH
Sbjct: 307 RFVEGFFKRASSLTELLKKDVH 328

[Close]

BLAST of Cmc07g0192321 vs. NCBI nr
Match: TYK07955.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 277.7 bits (709), Expect = 5.5e-71
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKIVAIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIVAIRDWAIPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0192321 vs. NCBI nr
Match: KAA0051481.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 276.9 bits (707), Expect = 9.4e-71
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 639 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 698

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 699 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAIPKSVSELRSFLGLANYYR 758

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 759 RFVEGFLKRASPLTELLKKDVH 780

[Close]

BLAST of Cmc07g0192321 vs. NCBI nr
Match: KAA0035531.1 (uncharacterized protein E6C27_scaffold285G001970 [Cucumis melo var. makuwa])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 136/142 (95.77%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 319 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 378

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWAV KSVSELRSFLGLANYYR
Sbjct: 379 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAVPKSVSELRSFLGLANYYR 438

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 439 RFVEGFSKRASPLTELLKKDVH 460

[Close]

BLAST of Cmc07g0192321 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 2.7e-70
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 784 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 843

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 844 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 903

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 904 RFVEGFSKRASPLTELLKKDVH 925

[Close]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-26
Identity = 59/141 (41.84%), Postives = 89/141 (63.12%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NAPATF   MN +    L++  +VYLDDI+V+ST+++EH   L  VF+KL +  
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           L ++ +KC F +++  FLGHV+    I     KI AI+ + +     E+++FLGL  YYR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFVEGFFKRASSLTELLKKDV 142
           +F+  F   A  +T+ LKK++
Sbjct: 454 KFIPNFADIAKPMTKCLKKNM 474

[Close]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NAPATF   MN +    L++  +VYLDDI+++ST++ EH + +Q VF KL +  
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           L ++ +KC F +++ NFLGH++    I     K+ AI  + +     E+R+FLGL  YYR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFVEGFFKRASSLTELLKK 140
           +F+  +   A  +T  LKK
Sbjct: 453 KFIPNYADIAKPMTSCLKK 471

[Close]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-25
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NAP+TF   M   F +    FV VYLDDI+++S + EEH  HL  V ++LK   
Sbjct: 718 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 777

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           L VK++KC FA E+  FLG+ I   +I   + K  AIRD+   K+V + + FLG+ NYYR
Sbjct: 778 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYR 837

Query: 121 RFVEGFFKRASSL 134
           RF+    K A  +
Sbjct: 838 RFIPNCSKIAQPI 848

[Close]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 3.7e-25
Identity = 60/133 (45.11%), Postives = 81/133 (60.90%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGL NAP+TF   M   F +    FV VYLDDI+++S + EEH  HL  V ++LK   
Sbjct: 744 MPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNEN 803

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           L VK++KC FA E+  FLG+ I   +I   + K  AIRD+   K+V + + FLG+ NYYR
Sbjct: 804 LIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYR 863

Query: 121 RFVEGFFKRASSL 134
           RF+    K A  +
Sbjct: 864 RFIPNCSKIAQPI 874

[Close]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-21
Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MP+G++ APA F   +N +  E  +  VV Y+DDI+++S +  EH  H++ V QKLK   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  LYVKREKCSFAQEQINFLG-HVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYY 120
           L + + KC F Q Q+ F+G H+ E G    +E  I  +  W   K+  ELR FLG  NY 
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQPKNRKELRQFLGSVNYL 653

Query: 121 RRFVEGFFKRASSLTELLKKDV 142
           R+F+    +    L  LLKKDV
Sbjct: 654 RKFIPKTSQLTHPLNNLLKKDV 674

[Close]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL
Match: A0A5A7UBW9 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00450 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.0e-74
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 187 MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 246

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR
Sbjct: 247 LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 306

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGFFKRASSLTELLKKDVH
Sbjct: 307 RFVEGFFKRASSLTELLKKDVH 328

[Close]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL
Match: A0A5D3C8Z6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00760 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.7e-71
Identity = 136/142 (95.77%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKIVAIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIVAIRDWAIPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL
Match: A0A5A7UD54 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G002510 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 4.6e-71
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 639 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 698

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 699 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAIPKSVSELRSFLGLANYYR 758

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 759 RFVEGFLKRASPLTELLKKDVH 780

[Close]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL
Match: A0A5A7T1S6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G001970 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.0e-71
Identity = 136/142 (95.77%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 319 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 378

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWAV KSVSELRSFLGLANYYR
Sbjct: 379 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAVPKSVSELRSFLGLANYYR 438

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 439 RFVEGFSKRASPLTELLKKDVH 460

[Close]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 135/142 (95.07%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MPFGLTNAPATFCTLMNQVFHEYLDEFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 60
           MPFGLTNAPATFCTLMNQVFHEYLD+FVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ
Sbjct: 788 MPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQ 847

Query: 61  LYVKREKCSFAQEQINFLGHVIECGRIGMEEGKIVAIRDWAVSKSVSELRSFLGLANYYR 120
           LYVKREKCSFAQE+INFLGHVIECGRIGMEEGKI AIRDWA+ KSVSELRSFLGLANYYR
Sbjct: 848 LYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWAMPKSVSELRSFLGLANYYR 907

Query: 121 RFVEGFFKRASSLTELLKKDVH 143
           RFVEGF KRAS LTELLKKDVH
Sbjct: 908 RFVEGFSKRASPLTELLKKDVH 929

[Close]

BLAST of Cmc07g0192321 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.4e-16
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 47  DHLQKVFQKLKENQLYVKREKCSFAQEQINFLG--HVIECGRIGMEEGKIVAIRDWAVSK 106
           +HL  V Q  +++Q Y  R+KC+F Q QI +LG  H+I    +  +  K+ A+  W   K
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61

Query: 107 SVSELRSFLGLANYYRRFVEGFFKRASSLTELLKKD 141
           + +ELR FLGL  YYRRFV+ + K    LTELLKK+
Sbjct: 62  NTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN 97

The following BLAST results are available for this feature:

BLAST of Cmc07g0192321 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0053383.1	4.1e-74	100.00	uncharacterized protein E6C27_scaffold428G00450 [Cucumis melo var. makuwa]	[more]
TYK07955.1	5.5e-71	95.77	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0051481.1	9.4e-71	95.07	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0035531.1	1.2e-70	95.77	uncharacterized protein E6C27_scaffold285G001970 [Cucumis melo var. makuwa]	[more]
KAA0067557.1	2.7e-70	95.07	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.5e-26	41.84	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.3e-25	41.01	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q99315	3.7e-25	45.11	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.7e-25	45.11	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	2.5e-21	39.44	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc07g0192321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UBW9	2.0e-74	100.00	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3C8Z6	2.7e-71	95.77	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5A7UD54	4.6e-71	95.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7T1S6	6.0e-71	95.77	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3C4R1	1.3e-70	95.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc07g0192321 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.4e-16	43.75	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..87 e-value: 3.1E-36 score: 126.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 92..142 e-value: 4.0E-15 score: 57.6
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..81 e-value: 2.4E-20 score: 73.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..82 score: 13.549389
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 1..139
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..139
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 1.47447E-42 score: 136.956
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192321.1	Cmc07g0192321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity