Cmc07g0192161 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192161
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 12602993 .. 12604116 (-)
RNA-Seq Expression	Cmc07g0192161
Synteny	Cmc07g0192161

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGATTTCGATGTAATCCTAGGCATAGATTGGCTCTCTGCTAACCATGCAAGTATAGACTGCTTCCGTAAAGAAGTCGTTTTTAACCCTCCCTCTGGGACTAGTTTCAAATCTAAGGGGGCAGGAATCATATGTATACCCAAGGTCATCTTAGCCATGAAGGCTAGTAAATTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCGTAGTAGATACTAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCAGTTGTAAGGGAGTACCCCGATGTTTTCCCCGACGAGCTTCCAGGTCTTCCACCTCCCAGGGAGATAAACTTTTCCATCGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGGCCCCTTACAGAATGACTCCAGCTGAGCTAAAGGAGCTGAAGGTACAGCTGCAGGAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATACGCCTTTGCATTGGCTACAGAGAGCTAAACAAGGTGACAGTCAAGAACCGTTACCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCAACGTCTTTTCCAAGATCGACCTACTATCAGGCTACCACCAGCTGAGGATCAGGGACAGTGATATTCCTAAGACCGCTTTTCGTTCCAGATACGGGCATTACAAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCCCGCGGTATTTAGGACTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGCCATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAAGAGTATTTGCATCAGGTTTTGGAGACTCTTCGAGCCAATAAGCTTTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAGGGTGACTTTCCTCGGCCACGTGGTTTTCAGTGAGGGAGTTTCTGTGGACCTGACAAAGATCGAAGCAGTTACCAGTTGGCCTCGACCGTCGACAGTCAGTGAGATTGGTAGTTTCTTGTGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGGCTTAG

mRNA sequence

ATGCAGGATTTCGATGTAATCCTAGGCATAGATTGGCTCTCTGCTAACCATGCAAGTATAGACTGCTTCCGTAAAGAAGTCGTTTTTAACCCTCCCTCTGGGACTAGTTTCAAATCTAAGGGGGCAGGAATCATATGTATACCCAAGGTCATCTTAGCCATGAAGGCTAGTAAATTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCGTAGTAGATACTAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCAGTTGTAAGGGAGTACCCCGATGTTTTCCCCGACGAGCTTCCAGGTCTTCCACCTCCCAGGGAGATAAACTTTTCCATCGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGGCCCCTTACAGAATGACTCCAGCTGAGCTAAAGGAGCTGAAGGTACAGCTGCAGGAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATACGCCTTTGCATTGGCTACAGAGAGCTAAACAAGGTGACAGTCAAGAACCGTTACCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCAACGTCTTTTCCAAGATCGACCTACTATCAGGCTACCACCAGCTGAGGATCAGGGACAGTGATATTCCTAAGACCGCTTTTCGTTCCAGATACGGGCATTACAAGTTCATTGACTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGCCATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAAGAGTATTTGCATCAGGTTTTGGAGACTCTTCGAGCCAATAAGCTTTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAGGGTGACTTTCCTCGGCCACGTGGTTTTCAGTGAGGGAGTTTCTGTGGACCTGACAAAGATCGAAGCAGTTACCAGTTGGCCTCGACCGTCGACAGTCAGTGAGATTGGTAGTTTCTTGTGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGGCTTAG

Coding sequence (CDS)

ATGCAGGATTTCGATGTAATCCTAGGCATAGATTGGCTCTCTGCTAACCATGCAAGTATAGACTGCTTCCGTAAAGAAGTCGTTTTTAACCCTCCCTCTGGGACTAGTTTCAAATCTAAGGGGGCAGGAATCATATGTATACCCAAGGTCATCTTAGCCATGAAGGCTAGTAAATTACTCAGCCAGGGTACCTGGAGCATCTTGGCAAGCGTAGTAGATACTAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCAGTTGTAAGGGAGTACCCCGATGTTTTCCCCGACGAGCTTCCAGGTCTTCCACCTCCCAGGGAGATAAACTTTTCCATCGAGTTAGAGTCAGACACTGCTCCTATCTTGAGGGCCCCTTACAGAATGACTCCAGCTGAGCTAAAGGAGCTGAAGGTACAGCTGCAGGAGTTGCTGGACAAGGGTTTCATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATACGCCTTTGCATTGGCTACAGAGAGCTAAACAAGGTGACAGTCAAGAACCGTTACCCCTTGCCCAGGATTGATGATTTGTTCGATCAGTTGCAAGGAGCCAACGTCTTTTCCAAGATCGACCTACTATCAGGCTACCACCAGCTGAGGATCAGGGACAGTGATATTCCTAAGACCGCTTTTCGTTCCAGATACGGGCATTACAAGTTCATTGACTTGATGAACAGAGTGTTTAAGGATTTCTTAGACACGTTTGTTATAGTTTTCATTGACGCCATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAAGAGTATTTGCATCAGGTTTTGGAGACTCTTCGAGCCAATAAGCTTTATGCCAAGTTCTCCAAGTGTGAGTTCTGGCTGAAGAGGGTGACTTTCCTCGGCCACGTGGTTTTCAGTGAGGGAGTTTCTGTGGACCTGACAAAGATCGAAGCAGTTACCAGTTGGCCTCGACCGTCGACAGTCAGTGAGATTGGTAGTTTCTTGTGTTTGGCAGGTTACTACAAGAGGTTCGTGGAAGACTTCTCTCGTATAGCCAGTCCCTTGGCTTAG

Protein sequence

MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLLSQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPILRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNKVTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFIDLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANKLYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYKRFVEDFSRIASPLA

Homology

[Close]

BLAST of Cmc07g0192161 vs. NCBI nr
Match: KAA0032541.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 647.1 bits (1668), Expect = 8.8e-182
Identity = 322/373 (86.33%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEV+FNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F IELE  TAPI
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFPIELEPGTAPI 564

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFRSRYGHYKF+ 
Sbjct: 625 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYKFVV 684

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 804

[Close]

BLAST of Cmc07g0192161 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 646.4 bits (1666), Expect = 1.5e-181
Identity = 323/373 (86.60%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 433 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 492

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 493 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 552

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 553 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 612

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRDSDIPKTAFR RYGHY+FI 
Sbjct: 613 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIV 672

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 792

[Close]

BLAST of Cmc07g0192161 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 645.6 bits (1664), Expect = 2.6e-181
Identity = 321/373 (86.06%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 564

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLP+IDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFRSRYGHY+F+ 
Sbjct: 625 VTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 684

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 804

[Close]

BLAST of Cmc07g0192161 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.8 bits (1662), Expect = 4.4e-181
Identity = 320/373 (85.79%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAGI+CIPKVI AMKASKLL
Sbjct: 360 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGIVCIPKVISAMKASKLL 419

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 420 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 479

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 480 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 539

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VT+KNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAF SRYGHY+F+ 
Sbjct: 540 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVV 599

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDF+D+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 600 MSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 659

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 660 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 719

[Close]

BLAST of Cmc07g0192161 vs. NCBI nr
Match: KAA0059723.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.4 bits (1661), Expect = 5.7e-181
Identity = 321/373 (86.06%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 447 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 506

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 507 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 566

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 567 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 626

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFR RYGHY+F+ 
Sbjct: 627 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVV 686

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 687 MSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 746

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 747 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 806

[Close]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 9.5e-46
Identity = 114/333 (34.23%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 55  KASKLLSQGTWSILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 114
           +AS L   G +S + S + + EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 579

Query: 115 EIN-----FSIELESDTAPILRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 174
           +IN       IE++         PY +T    +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 580 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 639

Query: 175 FVKKKDGSIRLCIGYRELNKVTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIR 234
            V KKDG+ RLC+ YR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 640 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 699

Query: 235 DSDIPKTAFRSRYGHYK--------------FIDLMNRVFKDFLDTFVIVFIDAILIYSK 294
             D  KTAF +  G Y+              F   M   F+D    FV V++D ILI+S+
Sbjct: 700 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 759

Query: 295 TEAEHEEYLHQVLETLRANKLYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSW 354
           +  EH ++L  VLE L+   L  K  KC+F  +   FLG+ +  + ++    K  A+  +
Sbjct: 760 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 819

Query: 355 PRPSTVSEIGSFLCLAGYYKRFVEDFSRIASPL 360
           P P TV +   FL +  YY+RF+ + S+IA P+
Sbjct: 820 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 848

[Close]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 9.5e-46
Identity = 114/333 (34.23%), Postives = 177/333 (53.15%), Query Frame = 0


Query: 55  KASKLLSQGTWSILASVVDTREPEVSLSSEP---------VVREYPDVFPDELPGLPPPR 114
           +AS L   G +S + S + + EP  +  S           + ++Y ++  ++LP  P P 
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLP--PRPA 605

Query: 115 EIN-----FSIELESDTAPILRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVL 174
           +IN       IE++         PY +T    +E+   +Q+LLD  FI PS SP  +PV+
Sbjct: 606 DINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVV 665

Query: 175 FVKKKDGSIRLCIGYRELNKVTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIR 234
            V KKDG+ RLC+ YR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ + 
Sbjct: 666 LVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPME 725

Query: 235 DSDIPKTAFRSRYGHYK--------------FIDLMNRVFKDFLDTFVIVFIDAILIYSK 294
             D  KTAF +  G Y+              F   M   F+D    FV V++D ILI+S+
Sbjct: 726 PKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSE 785

Query: 295 TEAEHEEYLHQVLETLRANKLYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSW 354
           +  EH ++L  VLE L+   L  K  KC+F  +   FLG+ +  + ++    K  A+  +
Sbjct: 786 SPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 845

Query: 355 PRPSTVSEIGSFLCLAGYYKRFVEDFSRIASPL 360
           P P TV +   FL +  YY+RF+ + S+IA P+
Sbjct: 846 PTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI 874

[Close]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 8.9e-44
Identity = 91/258 (35.27%), Postives = 154/258 (59.69%), Query Frame = 0


Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----IRLCIGY 180
           L + Y    A  +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ I Y
Sbjct: 209 LYSKYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDY 268

Query: 181 RELNKVTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGH 240
           R+LN++TV +R+P+P +D++  +L   N F+ IDL  G+HQ+ +    + KTAF +++GH
Sbjct: 269 RKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGH 328

Query: 241 YKFIDL--------------MNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLET 300
           Y+++ +              MN + +  L+   +V++D I+++S +  EH + L  V E 
Sbjct: 329 YEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEK 388

Query: 301 LRANKLYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCL 360
           L    L  +  KCEF  +  TFLGHV+  +G+  +  KIEA+  +P P+   EI +FL L
Sbjct: 389 LAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGL 448

[Close]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-42
Identity = 87/261 (33.33%), Postives = 147/261 (56.32%), Query Frame = 0


Query: 118 APILRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSIRLC 177
           +PI    Y +      E++ Q+QE+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 178 IGYRELNKVTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSR 237
           I YR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 238 YGHYKFIDL--------------MNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQV 297
            GHY+++ +              MN + +  L+   +V++D I+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 298 LETLRANKLYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSF 357
              L    L  +  KCEF  K   FLGH+V  +G+  +  K++A+ S+P P+   EI +F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 358 LCLAGYYKRFVEDFSRIASPL 360
           L L GYY++F+ +++ IA P+
Sbjct: 445 LGLTGYYRKFIPNYADIAKPM 465

[Close]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.2e-41
Identity = 91/291 (31.27%), Postives = 159/291 (54.64%), Query Frame = 0


Query: 89  EYPDVFPDELPGLPPPREINFSIELESDTAPILRAPYRMTPAELK-ELKVQLQELLDKGF 148
           E+P +F   L G+    E     E+ ++T   + A     P  ++ E++ Q+ ELL  G 
Sbjct: 94  EFPRIFEPPLSGMSV--ETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGI 153

Query: 149 IRPSVSPWGAPVLFVKKK-----DGSIRLCIGYRELNKVTVKNRYPLPRIDDLFDQLQGA 208
           IRPS SP+ +P+  V KK     +   R+ + ++ LN VT+ + YP+P I+     L  A
Sbjct: 154 IRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNA 213

Query: 209 NVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFIDL--------------MNRVFKD 268
             F+ +DL SG+HQ+ +++SDIPKTAF +  G Y+F+ L              ++ + ++
Sbjct: 214 KYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILRE 273

Query: 269 FLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANKLYAKFSKCEFWLKRVTFLGHVV 328
            +     V+ID I+++S+    H + L  VL +L    L     K  F   +V FLG++V
Sbjct: 274 HIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIV 333

Query: 329 FSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYKRFVEDFSRIASPL 360
            ++G+  D  K+ A++  P P++V E+  FL +  YY++F++D++++A PL
Sbjct: 334 TADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPL 382

[Close]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL
Match: A0A5A7SSL3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00540 PE=4 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 4.3e-182
Identity = 322/373 (86.33%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEV+FNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVIFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F IELE  TAPI
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFPIELEPGTAPI 564

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFRSRYGHYKF+ 
Sbjct: 625 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYKFVV 684

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 804

[Close]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 7.3e-182
Identity = 323/373 (86.60%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 433 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 492

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 493 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 552

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 553 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 612

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRDSDIPKTAFR RYGHY+FI 
Sbjct: 613 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIV 672

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 792

[Close]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 645.6 bits (1664), Expect = 1.2e-181
Identity = 321/373 (86.06%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 564

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLP+IDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFRSRYGHY+F+ 
Sbjct: 625 VTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 684

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 804

[Close]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.1e-181
Identity = 320/373 (85.79%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAGI+CIPKVI AMKASKLL
Sbjct: 360 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGIVCIPKVISAMKASKLL 419

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 420 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 479

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 480 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 539

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VT+KNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAF SRYGHY+F+ 
Sbjct: 540 VTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRYGHYEFVV 599

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDF+D+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 600 MSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 659

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 660 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 719

[Close]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL
Match: A0A5A7UUX8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1395G00080 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.8e-181
Identity = 321/373 (86.06%), Postives = 338/373 (90.62%), Query Frame = 0


Query: 1   MQDFDVILGIDWLSANHASIDCFRKEVVFNPPSGTSFKSKGAGIICIPKVILAMKASKLL 60
           MQDFDVILG+DWLSANHA+IDCF KEVVFNPPSG SFK +GAG++CIPKVI AMKASKLL
Sbjct: 447 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 506

Query: 61  SQGTWSILASVVDTREPEVSLSSEPVVREYPDVFPDELPGLPPPREINFSIELESDTAPI 120
           SQGTW ILASVVD REPEVSLSSEPVVREYPDVFPDELPGLPPPRE++F+IELE  TAPI
Sbjct: 507 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 566

Query: 121 LRAPYRMTPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSIRLCIGYRELNK 180
            RAPYRM PAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGS+RLCI YRELNK
Sbjct: 567 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 626

Query: 181 VTVKNRYPLPRIDDLFDQLQGANVFSKIDLLSGYHQLRIRDSDIPKTAFRSRYGHYKFI- 240
           VTVKNRYPLPRIDDLFDQLQGA VFSKIDL SGYHQLRIRD DIPKTAFR RYGHY+F+ 
Sbjct: 627 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRLRYGHYEFVV 686

Query: 241 -------------DLMNRVFKDFLDTFVIVFIDAILIYSKTEAEHEEYLHQVLETLRANK 300
                        DLMNRVFKDFLD+FVIVFID ILIYSKTEAEHEE+LHQVLETLRANK
Sbjct: 687 MSFGLTNTPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 746

Query: 301 LYAKFSKCEFWLKRVTFLGHVVFSEGVSVDLTKIEAVTSWPRPSTVSEIGSFLCLAGYYK 360
           LYAKFSKCEFWL++VTFLGHVV SEGVSVD  KIEAVT+WPRPSTVSEI SFL LAGYY+
Sbjct: 747 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 806

[Close]

BLAST of Cmc07g0192161 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 78.6 bits (192), Expect = 1.2e-14
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 274 YLHQVLETLRANKLYAKFSKCEFWLKRVTFLG--HVVFSEGVSVDLTKIEAVTSWPRPST 333
           +L  VL+    ++ YA   KC F   ++ +LG  H++  EGVS D  K+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 334 VSEIGSFLCLAGYYKRFVEDFSRIASPL 360
            +E+  FL L GYY+RFV+++ +I  PL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPL 90

The following BLAST results are available for this feature:

BLAST of Cmc07g0192161 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032541.1	8.8e-182	86.33	pol protein [Cucumis melo var. makuwa]	[more]
TYK01306.1	1.5e-181	86.60	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	2.6e-181	86.06	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058812.1	4.4e-181	85.79	pol protein [Cucumis melo var. makuwa]	[more]
KAA0059723.1	5.7e-181	86.06	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192161 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	9.5e-46	34.23	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	9.5e-46	34.23	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P04323	8.9e-44	35.27	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	1.7e-42	33.33	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	9.2e-41	31.27	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc07g0192161 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSL3	4.3e-182	86.33	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46...	[more]
A0A5D3BSV9	7.3e-182	86.60	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7V4E4	1.2e-181	86.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7USG7	2.1e-181	85.79	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]
A0A5A7UUX8	2.8e-181	86.06	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc07g0192161 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-14	39.77	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..308 e-value: 2.1E-73 score: 248.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 318..360 e-value: 7.6E-13 score: 50.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..238 e-value: 2.1E-73 score: 248.2
None	No IPR available	PFAM	PF08284	RVP_2	coord: 1..32 e-value: 8.9E-9 score: 35.3
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 119..359
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 119..359
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..308 e-value: 8.6981E-79 score: 237.494
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..39 e-value: 4.9E-5 score: 25.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 241..307 e-value: 2.1E-8 score: 33.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192161.1	Cmc07g0192161.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding