Cmc07g0192061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0192061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 12474928 .. 12476202 (+)
RNA-Seq Expression	Cmc07g0192061
Synteny	Cmc07g0192061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTAGTAAGCTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAGCTAGAAGTTTCCCTGTCCTCCGAACCACTGGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAAGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATCGAGTTAGAGCCGGACACTACTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTACAGCTGCAGAAGTTGCTGGATAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTTGGGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGAATCAGGGACAGTGACATACCTAAGACGGCCTTCCGTTCGAGACACAGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCTTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGCAGAGCATGAGGAGCATTTGCACCAAGTTTTGGAGACTCTTTGAGCCAATAGATTGTATGCCAAGTTCTCCAAGTGCGAGTTCTGATTGAAGAAGGTATCTTTCCTCGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGTGGTTACCAATTGGCCTCGACCGTCTACAGTGAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGCTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTACTTGTACGGTGAGAAGATATAG

mRNA sequence

ATGAAGGCTAGTAAGCTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAGCTAGAAGTTTCCCTGTCCTCCGAACCACTGGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAAGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATCGAGTTAGAGCCGGACACTACTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTACAGCTGCAGAAGTTGCTGGATAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTTGGGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGAATCAGGGACAGTGACATACCTAAGACGGCCTTCCGTTCGAGACACAGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCTTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGCAGAGCATGAGGAGCATTTGCACCAAGTATCTTTCCTCGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGTGGTTACCAATTGGCCTCGACCGTCTACAGTGAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGCTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTACTTGTACGGTGAGAAGATATAG

Coding sequence (CDS)

ATGAAGGCTAGTAAGCTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAGCTAGAAGTTTCCCTGTCCTCCGAACCACTGGTAAGGGAGTACCCTGATGTTTTCCCCGACGAGCTTCCAAGACTTCCGCCTCCTAGGGAGATAGACTTCGCCATCGAGTTAGAGCCGGACACTACTCCTATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAGGAGCTGAAGGTACAGCTGCAGAAGTTGCTGGATAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTTGGGAAGAAGAAGGATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACAGTTAAGAACCGCTACCCCTTGCCCAGGATTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGATCAGGCTACCACCAGTTGAGAATCAGGGACAGTGACATACCTAAGACGGCCTTCCGTTCGAGACACAGACATTACGAGTTCATTGTGATGTCTTTTGGTTTGACTAATGCTCTTGCAGTATTCATGGACTTGATGAACAGGGTGTTTAAGGACTTCCTAGACTCGTTCGTCATAGTTTTCATTGATGACATCTTGATTTACTCCAAGACTGAGGCAGAGCATGAGGAGCATTTGCACCAAGTATCTTTCCTCGGACATGTGGTGTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAGATCGAAGTGGTTACCAATTGGCCTCGACCGTCTACAGTGAGCGAGATTCGTAGTTTCCTGGGTTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCCTTGACCCAGTTGACCAGAAAGGGAACCCCTTTTGTTTGGAGCCCAGCTTGCGAGAGTAGCTTCCAGGAGCTTAAGCAGAAGCTAGTGACTGCACCAGTCCTGACAGTGCCTGATGGGTCGGGAAGCTTCGTGATCTACAGTGATGCCTCCAAAAAGGGACTGGGCTGTGTTCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTGGAGTTGGCAGTAGTGGTCTTTGCACTGAAGATATGGAGGCACTACTTGTACGGTGAGAAGATATAG

Protein sequence

MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGEKI

Homology

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BLAST of Cmc07g0192061 vs. NCBI nr
Match: KAA0046133.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 800.0 bits (2065), Expect = 9.1e-228
Identity = 398/399 (99.75%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL
Sbjct: 288 MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 347

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI
Sbjct: 348 EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 407

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH
Sbjct: 408 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 467

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS 240
           RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS
Sbjct: 468 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS 527

Query: 241 FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL 300
           FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL
Sbjct: 528 FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL 587

Query: 301 TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV 360
           TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV
Sbjct: 588 TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV 647

Query: 361 VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGE 400
           VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG+
Sbjct: 648 VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGK 686

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BLAST of Cmc07g0192061 vs. NCBI nr
Match: KAA0058812.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 752.7 bits (1942), Expect = 1.7e-213
Identity = 379/424 (89.39%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 413 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 472

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 473 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 532

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SR+
Sbjct: 533 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRY 592

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEF+VMSFGLTNA AVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 593 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVL 652

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 653 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 712

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG
Sbjct: 713 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 772

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 773 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELATVVFALKIWRHYLY 832

[Close]

BLAST of Cmc07g0192061 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 752.3 bits (1941), Expect = 2.2e-213
Identity = 380/424 (89.62%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR+
Sbjct: 618 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 678 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 738 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV APVLTVPDGSG
Sbjct: 798 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 858 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

[Close]

BLAST of Cmc07g0192061 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 751.5 bits (1939), Expect = 3.7e-213
Identity = 381/424 (89.86%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR R+
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRY 665

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEFIVMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 666 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 725

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 726 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 785

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTR+GTPFVWSP CESSFQ+LKQKLVTAPVLTVPDGSG
Sbjct: 786 GLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTAPVLTVPDGSG 845

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 846 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 905

[Close]

BLAST of Cmc07g0192061 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 4.8e-213
Identity = 380/424 (89.62%), Postives = 387/424 (91.27%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
            MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 862  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 921

Query: 61   EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
            EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 922  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 981

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR+
Sbjct: 982  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1041

Query: 181  RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
             HYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 1042 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1101

Query: 241  ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                 V+FLGHVVSSEGVSVDPAKIE VTNW RPSTVSEIRSFL
Sbjct: 1102 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1161

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 1162 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1221

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 1222 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1281

[Close]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-67
Identity = 140/395 (35.44%), Postives = 227/395 (57.47%), Query Frame = 0


Query: 33  LVREYPDVFPDELPRLPPPREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQKLLDK 92
           L+++Y D+   E  +L    +    I  + +    S+  Y  A  +  E++ Q+Q +L++
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQ--EVESQIQDMLNQ 235

Query: 93  GFIRPSVSPWGAPV-LFGKKKDGS----MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 152
           G IR S SP+ +P+ +  KK+D S     R+ IDYR+LN++TV +R+P+P +D++  +L 
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 153 GATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLTNALAVFMDLMNRVF 212
               F+ IDL  G+HQ+ +    + KTAF ++H HYE++ M FGL NA A F   MN + 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 213 KDFLDSFVIVFIDDILIYSKTEAEHEEHL-----------------------HQVSFLGH 272
           +  L+   +V++DDI+++S +  EH + L                        + +FLGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 273 VVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 332
           V++ +G+  +P KIE +  +P P+   EI++FLGL GYYR+F+ +F+ IA P+T+  +K 
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKN 475

Query: 333 TPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAY 392
                 +P  +S+F++LK  +   P+L VPD +  F + +DAS   LG VL Q G  ++Y
Sbjct: 476 MKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDGHPLSY 535

Query: 393 ASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG 399
            SR L  HE NY T + EL  +V+A K +RHYL G
Sbjct: 536 ISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLG 568

[Close]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-66
Identity = 130/365 (35.62%), Postives = 210/365 (57.53%), Query Frame = 0


Query: 65  TPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPV-LFGKKKDGS----MRLC 124
           +PI    Y +A     E++ Q+Q++L++G IR S SP+ +P  +  KK D S     R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 125 IDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSR 184
           IDYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 185 HRHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-- 244
             HYE++ M FGL NA A F   MN + +  L+   +V++DDI+I+S +  EH   +   
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 245 ---------------------QVSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSF 304
                                + +FLGH+V+ +G+  +P K++ + ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 305 LGLAGYYRRFVEDFSRIASPLTQLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDG 364
           LGL GYYR+F+ +++ IA P+T   +K T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 365 SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHY 401
              FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL  +V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

[Close]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 4.0e-61
Identity = 139/401 (34.66%), Postives = 219/401 (54.61%), Query Frame = 0


Query: 33  LVREYPDVFPDELPRLPPPREID-----FAIELEPDTTPISRAPYRMAPAELKELKVQLQ 92
           L ++Y ++  ++LP  P P +I+       IE++P        PY +     +E+   +Q
Sbjct: 586 LQQKYREIIRNDLP--PRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 645

Query: 93  KLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 152
           KLLD  FI PS SP  +PV+   KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++ 
Sbjct: 646 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 705

Query: 153 GATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLTNALAVFMDLMNRVF 212
            A +F+ +DL SGYHQ+ +   D  KTAF +    YE+ VM FGL NA + F   M   F
Sbjct: 706 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 765

Query: 213 KDFLDSFVIVFIDDILIYSKTEAEHEEHL-----------------------HQVSFLGH 272
           +D    FV V++DDILI+S++  EH +HL                        +  FLG+
Sbjct: 766 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 825

Query: 273 VVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 332
            +  + ++    K   + ++P P TV + + FLG+  YYRRF+ + S+IA P+       
Sbjct: 826 SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 885

Query: 333 TPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK----- 392
           +   W+   + + ++LK  L  +PVL   +   ++ + +DASK G+G VL +        
Sbjct: 886 SQ--WTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 945

Query: 393 -VVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGE 400
            VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+
Sbjct: 946 GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGK 980

[Close]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 236.5 bits (602), Expect = 5.2e-61
Identity = 139/401 (34.66%), Postives = 218/401 (54.36%), Query Frame = 0


Query: 33  LVREYPDVFPDELPRLPPPREID-----FAIELEPDTTPISRAPYRMAPAELKELKVQLQ 92
           L ++Y ++  ++LP  P P +I+       IE++P        PY +     +E+   +Q
Sbjct: 560 LQQKYREIIRNDLP--PRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQ 619

Query: 93  KLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQ 152
           KLLD  FI PS SP  +PV+   KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++ 
Sbjct: 620 KLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIG 679

Query: 153 GATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLTNALAVFMDLMNRVF 212
            A +F+ +DL SGYHQ+ +   D  KTAF +    YE+ VM FGL NA + F   M   F
Sbjct: 680 NAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTF 739

Query: 213 KDFLDSFVIVFIDDILIYSKTEAEHEEHL-----------------------HQVSFLGH 272
           +D    FV V++DDILI+S++  EH +HL                        +  FLG+
Sbjct: 740 RDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGY 799

Query: 273 VVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLTRKG 332
            +  + ++    K   + ++P P TV + + FLG+  YYRRF+ + S+IA P+       
Sbjct: 800 SIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDK 859

Query: 333 TPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK----- 392
           +   W+   + +  +LK  L  +PVL   +   ++ + +DASK G+G VL +        
Sbjct: 860 SQ--WTEKQDKAIDKLKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLV 919

Query: 393 -VVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGE 400
            VV Y S+ L+S ++NYP  +LEL  ++ AL  +R+ L+G+
Sbjct: 920 GVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGK 954

[Close]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.4e-60
Identity = 131/412 (31.80%), Postives = 220/412 (53.40%), Query Frame = 0


Query: 33  LVREYPDVFPDELPRLPPPREIDFAIELEPDTT---PISRAPYRMAPAELKELKVQLQKL 92
           L+ E+P +F   L  +     ++ A++ E  T    PI    Y        E++ Q+ +L
Sbjct: 91  LLGEFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDEL 150

Query: 93  LDKGFIRPSVSPWGAPVLFGKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFD 152
           L  G IRPS SP+ +P+    KK     +   R+ +D++ LN VT+ + YP+P I+    
Sbjct: 151 LQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLA 210

Query: 153 QLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRHRHYEFIVMSFGLTNALAVFMDLMN 212
            L  A  F+ +DL SG+HQ+ +++SDIPKTAF + +  YEF+ + FGL NA A+F  +++
Sbjct: 211 SLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMID 270

Query: 213 RVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH-----------------------QVSF 272
            + ++ +     V+IDDI+++S+    H ++L                        QV F
Sbjct: 271 DILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEF 330

Query: 273 LGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQLT 332
           LG++V+++G+  DP K+  ++  P P++V E++ FLG+  YYR+F++D++++A PLT LT
Sbjct: 331 LGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLT 390

Query: 333 R-----------KGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGL 392
           R              P         SF +LK  L ++ +L  P  +  F + +DAS   +
Sbjct: 391 RGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAI 450

Query: 393 GCVLMQ----QGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG 399
           G VL Q    + + +AY SR L   E+NY T + E+  ++++L   R YLYG
Sbjct: 451 GAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYG 498

[Close]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL
Match: A0A5A7TRD6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00720 PE=4 SV=1)

HSP 1 Score: 800.0 bits (2065), Expect = 4.4e-228
Identity = 398/399 (99.75%), Postives = 399/399 (100.00%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL
Sbjct: 288 MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 347

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI
Sbjct: 348 EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 407

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH
Sbjct: 408 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 467

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS 240
           RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS
Sbjct: 468 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVS 527

Query: 241 FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL 300
           FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL
Sbjct: 528 FLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTQL 587

Query: 301 TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV 360
           TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV
Sbjct: 588 TRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKV 647

Query: 361 VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGE 400
           VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYG+
Sbjct: 648 VAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLYGK 686

[Close]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL
Match: A0A5A7USG7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002890 PE=4 SV=1)

HSP 1 Score: 752.7 bits (1942), Expect = 8.0e-214
Identity = 379/424 (89.39%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 413 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 472

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 473 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 532

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVT+KNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAF SR+
Sbjct: 533 DYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFHSRY 592

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEF+VMSFGLTNA AVFMDLMNRVFKDF+DSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 593 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFIDSFVIVFIDDILIYSKTEAEHEEHLHQVL 652

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 653 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 712

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG
Sbjct: 713 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 772

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 773 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELATVVFALKIWRHYLY 832

[Close]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.0e-213
Identity = 380/424 (89.62%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 498 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 557

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 558 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 617

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR+
Sbjct: 618 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 677

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 678 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 737

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 738 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 797

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLV APVLTVPDGSG
Sbjct: 798 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPDGSG 857

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 858 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 917

[Close]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.8e-213
Identity = 381/424 (89.86%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
           MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 486 MKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 545

Query: 61  EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
           EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 546 EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 605

Query: 121 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
           DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFR R+
Sbjct: 606 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRY 665

Query: 181 RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
            HYEFIVMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 666 GHYEFIVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 725

Query: 241 ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                V+FLGHVVSSEGVSVDPAKIE VTNWPRPSTVSEIRSFL
Sbjct: 726 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFL 785

Query: 301 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
           GLAGYYRRFVEDFSRIASPLTQLTR+GTPFVWSP CESSFQ+LKQKLVTAPVLTVPDGSG
Sbjct: 786 GLAGYYRRFVEDFSRIASPLTQLTREGTPFVWSPTCESSFQKLKQKLVTAPVLTVPDGSG 845

Query: 361 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
           SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 846 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 905

[Close]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.3e-213
Identity = 380/424 (89.62%), Postives = 387/424 (91.27%), Query Frame = 0


Query: 1    MKASKLLSQGTWGILASVVDTRELEVSLSSEPLVREYPDVFPDELPRLPPPREIDFAIEL 60
            MKASKLLSQGTWGILASVVD RE EVSLSSEP+VREYPDVFPDELP LPPPRE+DFAIEL
Sbjct: 863  MKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIEL 922

Query: 61   EPDTTPISRAPYRMAPAELKELKVQLQKLLDKGFIRPSVSPWGAPVLFGKKKDGSMRLCI 120
            EP T PISRAPYRMAPAELKELKVQLQ+LLDKGFIRPSVSPWGAPVLF KKKDGSMRLCI
Sbjct: 923  EPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 982

Query: 121  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRH 180
            DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRD DIPKTAFRSR+
Sbjct: 983  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRY 1042

Query: 181  RHYEFIVMSFGLTNALAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ-- 240
             HYEF+VMSFGLTNA AVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQ  
Sbjct: 1043 GHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVL 1102

Query: 241  ---------------------VSFLGHVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFL 300
                                 V+FLGHVVSSEGVSVDPAKIE VTNW RPSTVSEIRSFL
Sbjct: 1103 ETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIRSFL 1162

Query: 301  GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSG 360
            GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPDGSG
Sbjct: 1163 GLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPDGSG 1222

Query: 361  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAVVVFALKIWRHYLY 402
            +FVIYSDASKKGLGCVLMQQGKVVAYASRQLK HEQNYPTHDLELA VVFALKIWRHYLY
Sbjct: 1223 NFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRHYLY 1282

[Close]

BLAST of Cmc07g0192061 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-22
Identity = 48/105 (45.71%), Postives = 69/105 (65.71%), Query Frame = 0


Query: 238 QVSFLG--HVVSSEGVSVDPAKIEVVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIAS 297
           Q+++LG  H++S EGVS DPAK+E +  WP P   +E+R FLGL GYYRRFV+++ +I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 298 PLTQLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFV 341
           PLT+L +K +   W+     +F+ LK  + T PVL +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc07g0192061 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046133.1	9.1e-228	99.75	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0058812.1	1.7e-213	89.39	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	2.2e-213	89.62	pol protein [Cucumis melo var. makuwa]	[more]
TYK01306.1	3.7e-213	89.86	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	4.8e-213	89.62	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0192061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	1.7e-67	35.44	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	4.1e-66	35.62	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q7LHG5	4.0e-61	34.66	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	5.2e-61	34.66	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	3.4e-60	31.80	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc07g0192061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRD6	4.4e-228	99.75	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7USG7	8.0e-214	89.39	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold33...	[more]
A0A5A7V4E4	1.0e-213	89.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5D3BSV9	1.8e-213	89.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5D3BTN0	2.3e-213	89.62	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]

BLAST of Cmc07g0192061 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-22	45.71	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 55..194 e-value: 2.9E-77 score: 260.7
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 66..399
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..399
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..246 e-value: 3.38454E-79 score: 239.805
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 309..401 e-value: 1.4E-30 score: 105.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 260..346 e-value: 3.6E-32 score: 112.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..259 e-value: 2.9E-77 score: 260.7
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 110..263 e-value: 9.0E-21 score: 74.4
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..281 score: 8.81412
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..400

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0192061.1	Cmc07g0192061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding