Cmc07g0191521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 11336785 .. 11337273 (-)
RNA-Seq Expression	Cmc07g0191521
Synteny	Cmc07g0191521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAACATAGAGATCACCTGCAAAAAGTTTTTCAGAAATTAAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTTCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGGATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGAAGTGCCAAAATCAGTCTCAGAGTTACGCTCCTTCCTCAGGTTGGAAAATTACTACCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTGAAAAAAGACGTTCACTGGAGTTGGAACCCCGAGTGTCAAGCCGCCTTAGATGGCCTAAAGCAAGCCATGATGGAGGGGGCACTTCTGGGGATTGCAGATGTGACCAAACCTTTGAAGGTCGAGACAGATGCGTCTTATTATGCGTTGGAGGTGTGCTTCTGCAGAATGGGCACCCGATCGCATACGAAGGTCGAAAGCTGA

mRNA sequence

ATGGAGGAACATAGAGATCACCTGCAAAAAGTTTTTCAGAAATTAAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTTCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGGATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGAAGTGCCAAAATCAGTCTCAGAGTTACGCTCCTTCCTCAGGTTGGAAAATTACTACCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTGAAAAAAGACGTTCACTGGAGTTGGAACCCCGAGTGTCAAGCCGCCTTAGATGGCCTAAAGCAAGCCATGATGGAGGGGGCACTTCTGGGGATTGCAGATGTGACCAAACCTTTGAAGGTCGAGACAGATGCGTCTTATTATGCGTTGGAGGTGTGCTTCTGCAGAATGGGCACCCGATCGCATACGAAGGTCGAAAGCTGA

Coding sequence (CDS)

ATGGAGGAACATAGAGATCACCTGCAAAAAGTTTTTCAGAAATTAAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGTTCTTTTTCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTGTGGCCGAATTGGGATGGAAGAAGGGAAGATTGCTGCGATACGCGACTGGGAAGTGCCAAAATCAGTCTCAGAGTTACGCTCCTTCCTCAGGTTGGAAAATTACTACCATCGATTTGTCGAGGGATTCTCCAAACGAGCAAGCCCGCTGACTGAACTACTGAAAAAAGACGTTCACTGGAGTTGGAACCCCGAGTGTCAAGCCGCCTTAGATGGCCTAAAGCAAGCCATGATGGAGGGGGCACTTCTGGGGATTGCAGATGTGACCAAACCTTTGAAGGTCGAGACAGATGCGTCTTATTATGCGTTGGAGGTGTGCTTCTGCAGAATGGGCACCCGATCGCATACGAAGGTCGAAAGCTGA

Protein sequence

MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWEVPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMMEGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES

Homology

[Close]

BLAST of Cmc07g0191521 vs. NCBI nr
Match: TYK15835.1 (uncharacterized protein E5676_scaffold637G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 150/162 (92.59%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVI+CGRIGMEEGKIAAIRDW 
Sbjct: 658 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIKCGRIGMEEGKIAAIRDWA 717

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           VPKSVSELRSFL L NYY RFVEGF KRASPLTELLKKDVHWSW+PECQAA DGLKQAMM
Sbjct: 718 VPKSVSELRSFLGLANYYRRFVEGFFKRASPLTELLKKDVHWSWDPECQAAFDGLKQAMM 777

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EGALLGIADVTKP KVETDASYYALEVC CRMGTRSH KVES
Sbjct: 778 EGALLGIADVTKPFKVETDASYYALEVCSCRMGTRSHMKVES 819

[Close]

BLAST of Cmc07g0191521 vs. NCBI nr
Match: KAA0057285.1 (uncharacterized protein E6C27_scaffold280G001260 [Cucumis melo var. makuwa])

HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76
Identity = 143/162 (88.27%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAIRDW 
Sbjct: 285 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWA 344

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFLRL NYY RF+EGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQA+M
Sbjct: 345 MPKSVSELRSFLRLANYYRRFIEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALM 404

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG LLGI DVTKP +VETDAS YAL VC  RMGTRSHTKVE+
Sbjct: 405 EGPLLGIVDVTKPFEVETDASDYALGVCSYRMGTRSHTKVEN 446

[Close]

BLAST of Cmc07g0191521 vs. NCBI nr
Match: KAA0052270.1 (uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa])

HSP 1 Score: 285.8 bits (730), Expect = 2.3e-73
Identity = 139/162 (85.80%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAI DW 
Sbjct: 553 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIHDWA 612

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFL L NYY RFVEGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQAM+
Sbjct: 613 MPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQAMI 672

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG LLGIADVT+P +VETDAS YAL VC  RM TR HTKV++
Sbjct: 673 EGPLLGIADVTQPFEVETDASDYALGVCSYRMDTRLHTKVKN 714

[Close]

BLAST of Cmc07g0191521 vs. NCBI nr
Match: TYK25834.1 (uncharacterized protein E5676_scaffold436G00420 [Cucumis melo var. makuwa])

HSP 1 Score: 278.5 bits (711), Expect = 3.7e-71
Identity = 137/162 (84.57%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIG+EEGKIAAIRDW 
Sbjct: 247 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGIEEGKIAAIRDWA 306

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSV EL SFL L NYY RFVEGF KRAS LTELLKKDV+W+W+ ECQAA DGLKQAMM
Sbjct: 307 MPKSVLELHSFLGLVNYYRRFVEGFLKRASRLTELLKKDVNWNWDLECQAAFDGLKQAMM 366

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG L+GIADVTKP +VETDAS YAL VC  RMGTRSHTKVE+
Sbjct: 367 EGPLIGIADVTKPFEVETDASNYALGVCSYRMGTRSHTKVEN 408

[Close]

BLAST of Cmc07g0191521 vs. NCBI nr
Match: KAA0064232.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK18602.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 9.1e-70
Identity = 132/145 (91.03%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDH+QKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAIRDW 
Sbjct: 42  MEEHRDHMQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWA 101

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFLRL NYY RFVEGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQAMM
Sbjct: 102 MPKSVSELRSFLRLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQAMM 161

Query: 121 EGALLGIADVTKPLKVETDASYYAL 146
           EG LLGIADVTKP +VETDAS YAL
Sbjct: 162 EGPLLGIADVTKPFEVETDASDYAL 186

[Close]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 3   EHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLG-HVIECGRIGMEEGKIAAIRDWEV 62
           EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W+ 
Sbjct: 577 EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQ 636

Query: 63  PKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMME 122
           PK+  ELR FL   NY  +F+   S+   PL  LLKKDV W W P    A++ +KQ ++ 
Sbjct: 637 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 696

Query: 123 GALLGIADVTKPLKVETDASYYAL 146
             +L   D +K + +ETDAS  A+
Sbjct: 697 PPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 3   EHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLG-HVIECGRIGMEEGKIAAIRDWEV 62
           EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W+ 
Sbjct: 577 EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQ 636

Query: 63  PKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMME 122
           PK+  ELR FL   NY  +F+   S+   PL  LLKKDV W W P    A++ +KQ ++ 
Sbjct: 637 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 696

Query: 123 GALLGIADVTKPLKVETDASYYAL 146
             +L   D +K + +ETDAS  A+
Sbjct: 697 PPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 3   EHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLG-HVIECGRIGMEEGKIAAIRDWEV 62
           EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W+ 
Sbjct: 577 EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQ 636

Query: 63  PKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMME 122
           PK+  ELR FL   NY  +F+   S+   PL  LLKKDV W W P    A++ +KQ ++ 
Sbjct: 637 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 696

Query: 123 GALLGIADVTKPLKVETDASYYAL 146
             +L   D +K + +ETDAS  A+
Sbjct: 697 PPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 3   EHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLG-HVIECGRIGMEEGKIAAIRDWEV 62
           EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W+ 
Sbjct: 577 EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQ 636

Query: 63  PKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMME 122
           PK+  ELR FL   NY  +F+   S+   PL  LLKKDV W W P    A++ +KQ ++ 
Sbjct: 637 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 696

Query: 123 GALLGIADVTKPLKVETDASYYAL 146
             +L   D +K + +ETDAS  A+
Sbjct: 697 PPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-21
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = 0


Query: 3   EHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLG-HVIECGRIGMEEGKIAAIRDWEV 62
           EH  H++ V QKLK   L + + KC F Q ++ F+G H+ E G    +E  I  +  W+ 
Sbjct: 577 EHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQE-NIDKVLQWKQ 636

Query: 63  PKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMME 122
           PK+  ELR FL   NY  +F+   S+   PL  LLKKDV W W P    A++ +KQ ++ 
Sbjct: 637 PKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVS 696

Query: 123 GALLGIADVTKPLKVETDASYYAL 146
             +L   D +K + +ETDAS  A+
Sbjct: 697 PPVLRHFDFSKKILLETDASDVAV 719

[Close]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL
Match: A0A5D3CWI9 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00050 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80
Identity = 150/162 (92.59%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVI+CGRIGMEEGKIAAIRDW 
Sbjct: 658 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIKCGRIGMEEGKIAAIRDWA 717

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           VPKSVSELRSFL L NYY RFVEGF KRASPLTELLKKDVHWSW+PECQAA DGLKQAMM
Sbjct: 718 VPKSVSELRSFLGLANYYRRFVEGFFKRASPLTELLKKDVHWSWDPECQAAFDGLKQAMM 777

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EGALLGIADVTKP KVETDASYYALEVC CRMGTRSH KVES
Sbjct: 778 EGALLGIADVTKPFKVETDASYYALEVCSCRMGTRSHMKVES 819

[Close]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL
Match: A0A5A7UUR0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G001260 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.9e-77
Identity = 143/162 (88.27%), Postives = 151/162 (93.21%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAIRDW 
Sbjct: 285 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWA 344

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFLRL NYY RF+EGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQA+M
Sbjct: 345 MPKSVSELRSFLRLANYYRRFIEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQALM 404

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG LLGI DVTKP +VETDAS YAL VC  RMGTRSHTKVE+
Sbjct: 405 EGPLLGIVDVTKPFEVETDASDYALGVCSYRMGTRSHTKVEN 446

[Close]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL
Match: A0A5A7UAP7 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G00960 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.1e-73
Identity = 139/162 (85.80%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAI DW 
Sbjct: 553 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIHDWA 612

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFL L NYY RFVEGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQAM+
Sbjct: 613 MPKSVSELRSFLGLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQAMI 672

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG LLGIADVT+P +VETDAS YAL VC  RM TR HTKV++
Sbjct: 673 EGPLLGIADVTQPFEVETDASDYALGVCSYRMDTRLHTKVKN 714

[Close]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL
Match: A0A5D3DQI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00420 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 137/162 (84.57%), Postives = 146/162 (90.12%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDHLQKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIG+EEGKIAAIRDW 
Sbjct: 247 MEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGIEEGKIAAIRDWA 306

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSV EL SFL L NYY RFVEGF KRAS LTELLKKDV+W+W+ ECQAA DGLKQAMM
Sbjct: 307 MPKSVLELHSFLGLVNYYRRFVEGFLKRASRLTELLKKDVNWNWDLECQAAFDGLKQAMM 366

Query: 121 EGALLGIADVTKPLKVETDASYYALEVCFCRMGTRSHTKVES 163
           EG L+GIADVTKP +VETDAS YAL VC  RMGTRSHTKVE+
Sbjct: 367 EGPLIGIADVTKPFEVETDASNYALGVCSYRMGTRSHTKVEN 408

[Close]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL
Match: A0A5A7V785 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001330 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.4e-70
Identity = 132/145 (91.03%), Postives = 138/145 (95.17%), Query Frame = 0


Query: 1   MEEHRDHLQKVFQKLKENQLYVKREKCSFSQERINFLGHVIECGRIGMEEGKIAAIRDWE 60
           MEEHRDH+QKVFQKLKENQLYVKREKCSF+QERINFLGHVIECGRIGMEEGKIAAIRDW 
Sbjct: 42  MEEHRDHMQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDWA 101

Query: 61  VPKSVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMM 120
           +PKSVSELRSFLRL NYY RFVEGFSKRASPLTELLKKDVHW+W+PECQAA DGLKQAMM
Sbjct: 102 MPKSVSELRSFLRLANYYRRFVEGFSKRASPLTELLKKDVHWNWDPECQAAFDGLKQAMM 161

Query: 121 EGALLGIADVTKPLKVETDASYYAL 146
           EG LLGIADVTKP +VETDAS YAL
Sbjct: 162 EGPLLGIADVTKPFEVETDASDYAL 186

[Close]

BLAST of Cmc07g0191521 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.3e-18
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 0


Query: 6   DHLQKVFQKLKENQLYVKREKCSFSQERINFLG--HVIECGRIGMEEGKIAAIRDWEVPK 65
           +HL  V Q  +++Q Y  R+KC+F Q +I +LG  H+I    +  +  K+ A+  W  PK
Sbjct: 2   NHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPK 61

Query: 66  SVSELRSFLRLENYYHRFVEGFSKRASPLTELLKKDVHWSWNPECQAALDGLKQAMMEGA 125
           + +ELR FL L  YY RFV+ + K   PLTELLKK+    W      A   LK A+    
Sbjct: 62  NTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLP 121

Query: 126 LLGIADVTKP 134
           +L + D+  P
Sbjct: 122 VLALPDLKLP 130

The following BLAST results are available for this feature:

BLAST of Cmc07g0191521 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15835.1	2.6e-80	92.59	uncharacterized protein E5676_scaffold637G00050 [Cucumis melo var. makuwa]	[more]
KAA0057285.1	1.0e-76	88.27	uncharacterized protein E6C27_scaffold280G001260 [Cucumis melo var. makuwa]	[more]
KAA0052270.1	2.3e-73	85.80	uncharacterized protein E6C27_scaffold207G00960 [Cucumis melo var. makuwa]	[more]
TYK25834.1	3.7e-71	84.57	uncharacterized protein E5676_scaffold436G00420 [Cucumis melo var. makuwa]	[more]
KAA0064232.1	9.1e-70	91.03	reverse transcriptase [Cucumis melo var. makuwa] >TYK18602.1 reverse transcripta...	[more]

BLAST of Cmc07g0191521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	2.1e-21	38.19	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	2.1e-21	38.19	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.1e-21	38.19	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.1e-21	38.19	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.1e-21	38.19	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0191521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CWI9	1.2e-80	92.59	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UUR0	4.9e-77	88.27	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UAP7	1.1e-73	85.80	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DQI8	1.8e-71	84.57	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V785	4.4e-70	91.03	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc07g0191521 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.3e-18	37.69	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 104..153 e-value: 2.2E-8 score: 34.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 51..141 e-value: 4.3E-25 score: 89.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..46 e-value: 2.7E-13 score: 51.9
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 4..123
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 4..123
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0191521.1	Cmc07g0191521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity