Cmc07g0191151 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191151
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 10643789 .. 10644250 (-)
RNA-Seq Expression	Cmc07g0191151
Synteny	Cmc07g0191151

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGGCTTGACAAATGCTTCTGTTGTATTTATGGATATGATGAACAGAATGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTTATCGATGATATCTTGGTTTACTCCAAGATAGAGGCAGAGCATGAGGAGCATTTGCATAAGGTTTTGGAGACTCTTCGAACCAATAAACTATACGCTAAGTTTTCTAAGTGCGAGTTTTGGCTGAAGAATGTGTCCTTTCGTGGCCATGTAGTATCCAGTGAGGAAGTCTCTGTAGACCCAACGATGATTGAAGCTGTTACTAGTTGGCCTCGACCATCCACAGTCAGCAAAGTTCGTAGTTTTATGGGTTTAGCAGGTTATTACAGAAGGTTCATAGAAGACTTCTCTCGTGTAGCTAGTCCGTTGACGCAGTTGACCAAAAAGAGGACTCCTTTTGTTTGGAGCCCAGCCTGTGAGAGTAGTTTCTAG

mRNA sequence

ATGTCTTTTGGCTTGACAAATGCTTCTGTTGTATTTATGGATATGATGAACAGAATGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTTATCGATGATATCTTGGTTTACTCCAAGATAGAGGCAGAGCATGAGGAGCATTTGCATAAGGTTTTGGAGACTCTTCGAACCAATAAACTATACGCTAAGTTTTCTAAGTGCGAGTTTTGGCTGAAGAATGTGTCCTTTCGTGGCCATGTAGTATCCAGTGAGGAAGTCTCTGTAGACCCAACGATGATTGAAGCTGTTACTAGTTGGCCTCGACCATCCACAGTCAGCAAAGTTCGTAGTTTTATGGGTTTAGCAGGTTATTACAGAAGGTTCATAGAAGACTTCTCTCGTGTAGCTAGTCCGTTGACGCAGTTGACCAAAAAGAGGACTCCTTTTGTTTGGAGCCCAGCCTGTGAGAGTAGTTTCTAG

Coding sequence (CDS)

ATGTCTTTTGGCTTGACAAATGCTTCTGTTGTATTTATGGATATGATGAACAGAATGTTTAAGGATTTCTTAGACACTTTTGTTATAGTTTTTATCGATGATATCTTGGTTTACTCCAAGATAGAGGCAGAGCATGAGGAGCATTTGCATAAGGTTTTGGAGACTCTTCGAACCAATAAACTATACGCTAAGTTTTCTAAGTGCGAGTTTTGGCTGAAGAATGTGTCCTTTCGTGGCCATGTAGTATCCAGTGAGGAAGTCTCTGTAGACCCAACGATGATTGAAGCTGTTACTAGTTGGCCTCGACCATCCACAGTCAGCAAAGTTCGTAGTTTTATGGGTTTAGCAGGTTATTACAGAAGGTTCATAGAAGACTTCTCTCGTGTAGCTAGTCCGTTGACGCAGTTGACCAAAAAGAGGACTCCTTTTGTTTGGAGCCCAGCCTGTGAGAGTAGTTTCTAG

Protein sequence

MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNKLYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYRRFIEDFSRVASPLTQLTKKRTPFVWSPACESSF

Homology

[Close]

BLAST of Cmc07g0191151 vs. NCBI nr
Match: KAA0045473.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 306.6 bits (784), Expect = 1.2e-79
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK
Sbjct: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR
Sbjct: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF
Sbjct: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 153

[Close]

BLAST of Cmc07g0191151 vs. NCBI nr
Match: TYJ96191.1 (putative polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 289.7 bits (740), Expect = 1.5e-74
Identity = 144/153 (94.12%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETL+TNK
Sbjct: 167 MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLQTNK 226

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWLKNVSF GHVVSSEEVSVDPT IEAVTSWPRPSTVS+V SF+GL GYYR
Sbjct: 227 LYAKFSKCEFWLKNVSFLGHVVSSEEVSVDPTKIEAVTSWPRPSTVSEVCSFLGLVGYYR 286

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RFIEDFSR+ASPLTQLTKK TPFVWSPACESSF
Sbjct: 287 RFIEDFSRIASPLTQLTKKGTPFVWSPACESSF 319

[Close]

BLAST of Cmc07g0191151 vs. NCBI nr
Match: KAA0059657.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 1.9e-69
Identity = 130/153 (84.97%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNAS VFMD+MN++FKDFLD+FVIVFIDDIL+YSKIEAEHEEHLH+VLETLR NK
Sbjct: 128 MSFGLTNASAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQVLETLRANK 187

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDP  IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 188 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 247

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 248 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 280

[Close]

BLAST of Cmc07g0191151 vs. NCBI nr
Match: TYK05193.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 3.3e-69
Identity = 130/153 (84.97%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNA  VFMD+MNR+FKDFLD+FVIVFIDDIL+YSK EAEHEEHLH+VLETLR NK
Sbjct: 756 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 815

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDPT IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 816 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYR 875

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 876 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 908

[Close]

BLAST of Cmc07g0191151 vs. NCBI nr
Match: TYK18480.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 3.3e-69
Identity = 130/153 (84.97%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNA  VFMD+MNR+FKDFLD+FVIVFIDDIL+YSK EAEHEEHLH+VLETLR NK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDPT IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 371 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 403

[Close]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 51/141 (36.17%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           M FGL NA   F   MN + +  L+   +V++DDI+++S    EH   +  V   L    
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           L  +  KCEF  K  +F GH+V+ + +  +P  ++A+ S+P P+   ++R+F+GL GYYR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFIEDFSRVASPLTQLTKKRT 142
           +FI +++ +A P+T   KKRT
Sbjct: 453 KFIPNYADIAKPMTSCLKKRT 473

[Close]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 55/154 (35.71%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           M FGL NA   F   MN + +  L+   +V++DDI+V+S    EH + L  V E L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           L  +  KCEF  +  +F GHV++ + +  +P  IEA+  +P P+   ++++F+GL GYYR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFIEDFSRVASPLTQLTKKRTPF-VWSPACESSF 154
           +FI +F+ +A P+T+  KK       +P  +S+F
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAF 487

[Close]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-21
Identity = 48/138 (34.78%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           + FGL NAS +F   ++ + ++ +     V++DD++++S+ E++H  H+  VL+ L    
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           +     K  F+ ++V + G +VS +    DP  ++A+  +P P  V KVRSF+GLA YYR
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYR 428

Query: 121 RFIEDFSRVASPLTQLTK 139
            FI+DF+ +A P+T + K
Sbjct: 429 VFIKDFAAIARPITDILK 446

[Close]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20
Identity = 47/138 (34.06%), Postives = 84/138 (60.87%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           + FGL NA  +F  M++ + ++ +     V+IDDI+V+S+    H ++L  VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           L     K  F    V F G++V+++ +  DP  + A++  P P++V +++ F+G+  YYR
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFIEDFSRVASPLTQLTK 139
           +FI+D+++VA PLT LT+
Sbjct: 370 KFIQDYAKVAKPLTNLTR 387

[Close]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.1e-18
Identity = 47/147 (31.97%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           M +G++ A   F   +N +  +  ++ V+ ++DDIL++SK E+EH +H+  VL+ L+   
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNAN 593

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           L    +KCEF    V F G+ +S +  +     I+ V  W +P    ++R F+G   Y R
Sbjct: 594 LIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLR 653

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSP 148
           +FI   S++  PL  L KK   + W+P
Sbjct: 654 KFIPKTSQLTHPLNNLLKKDVRWKWTP 680

[Close]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL
Match: A0A5A7TPL1 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00050 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.8e-80
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK
Sbjct: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR
Sbjct: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF
Sbjct: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 153

[Close]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL
Match: A0A5D3BC60 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold261G00200 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.3e-75
Identity = 144/153 (94.12%), Postives = 148/153 (96.73%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETL+TNK
Sbjct: 167 MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLQTNK 226

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWLKNVSF GHVVSSEEVSVDPT IEAVTSWPRPSTVS+V SF+GL GYYR
Sbjct: 227 LYAKFSKCEFWLKNVSFLGHVVSSEEVSVDPTKIEAVTSWPRPSTVSEVCSFLGLVGYYR 286

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RFIEDFSR+ASPLTQLTKK TPFVWSPACESSF
Sbjct: 287 RFIEDFSRIASPLTQLTKKGTPFVWSPACESSF 319

[Close]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL
Match: A0A5A7UYD6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00970 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.3e-70
Identity = 130/153 (84.97%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNAS VFMD+MN++FKDFLD+FVIVFIDDIL+YSKIEAEHEEHLH+VLETLR NK
Sbjct: 128 MSFGLTNASAVFMDLMNKVFKDFLDSFVIVFIDDILIYSKIEAEHEEHLHQVLETLRANK 187

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDP  IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 188 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYR 247

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 248 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 280

[Close]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL
Match: A0A5D3D4M7 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00520 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 130/153 (84.97%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNA  VFMD+MNR+FKDFLD+FVIVFIDDIL+YSK EAEHEEHLH+VLETLR NK
Sbjct: 251 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDPT IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYR 370

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 371 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 403

[Close]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL
Match: A0A5D3BZN1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00670 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 130/153 (84.97%), Postives = 144/153 (94.12%), Query Frame = 0


Query: 1   MSFGLTNASVVFMDMMNRMFKDFLDTFVIVFIDDILVYSKIEAEHEEHLHKVLETLRTNK 60
           MSFGLTNA  VFMD+MNR+FKDFLD+FVIVFIDDIL+YSK EAEHEEHLH+VLETLR NK
Sbjct: 756 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 815

Query: 61  LYAKFSKCEFWLKNVSFRGHVVSSEEVSVDPTMIEAVTSWPRPSTVSKVRSFMGLAGYYR 120
           LYAKFSKCEFWL+ V+F GHVVSSE VSVDPT IEAVT+WPRPSTVS++RSF+GLAGYYR
Sbjct: 816 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPTKIEAVTNWPRPSTVSEIRSFLGLAGYYR 875

Query: 121 RFIEDFSRVASPLTQLTKKRTPFVWSPACESSF 154
           RF+EDFSR+ASPLTQLT+K TPFVWSPACESSF
Sbjct: 876 RFVEDFSRIASPLTQLTRKGTPFVWSPACESSF 908

[Close]

BLAST of Cmc07g0191151 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 38/96 (39.58%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 48  HLHKVLETLRTNKLYAKFSKCEFWLKNVSFRG--HVVSSEEVSVDPTMIEAVTSWPRPST 107
           HL  VL+    ++ YA   KC F    +++ G  H++S E VS DP  +EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 108 VSKVRSFMGLAGYYRRFIEDFSRVASPLTQLTKKRT 142
            +++R F+GL GYYRRF++++ ++  PLT+L KK +
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS 98

The following BLAST results are available for this feature:

BLAST of Cmc07g0191151 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045473.1	1.2e-79	100.00	pol protein [Cucumis melo var. makuwa]	[more]
TYJ96191.1	1.5e-74	94.12	putative polyprotein [Cucumis melo var. makuwa]	[more]
KAA0059657.1	1.9e-69	84.97	pol protein [Cucumis melo var. makuwa]	[more]
TYK05193.1	3.3e-69	84.97	pol protein [Cucumis melo var. makuwa]	[more]
TYK18480.1	3.3e-69	84.97	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0191151 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	4.8e-23	36.17	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	3.1e-22	35.71	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10401	2.0e-21	34.78	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
Q8I7P9	1.7e-20	34.06	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	6.1e-18	31.97	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of Cmc07g0191151 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TPL1	5.8e-80	100.00	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1202G00050 P...	[more]
A0A5D3BC60	7.3e-75	94.12	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold261...	[more]
A0A5A7UYD6	9.3e-70	84.97	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold54G00970 PE=...	[more]
A0A5D3D4M7	1.6e-69	84.97	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold607G00520 PE...	[more]
A0A5D3BZN1	1.6e-69	84.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14...	[more]

BLAST of Cmc07g0191151 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.1e-18	39.58	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..88 e-value: 1.5E-29 score: 104.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 93..153 e-value: 7.0E-23 score: 82.5
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 1..80 e-value: 1.3E-13 score: 51.0
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 18..150
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 18..150
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..82 e-value: 4.57883E-33 score: 113.074
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0191151.1	Cmc07g0191151.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding