Cmc07g0191031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0191031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr07: 10490210 .. 10490734 (+)
RNA-Seq Expression	Cmc07g0191031
Synteny	Cmc07g0191031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTTAAGAATGCCTTCTTAAATGGAGAGTTTGATCGAGATATATATATGGAGCAACCAAAAGGATTTAAGGATAAAATTCATCATGACTATGTCTGCAAGCTAAGAATATATGGCTTGAAGCAAGTTCCAAGAGCCTGGTACGGAAAGATTGCAAAATTTCTTGTTGAAAGTAGCTTTACAGTAGTTTCAGCCGATTCCAGTTTATTTGTCAAAGCTCAAGATTCAAAGGTCGCAATTATATTAGTCTATATGGATAATCTAATTATAACAGGAGACCACATAGATGAAGCTCGACAAATAAAGCAGAACCTACTAGTTCGTTTTGAAATGAAGGAACTTGGAGAACTAAAGCACTTTCTTGGATTAGAGATGGAATACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAGAAGTATGATATGACTGACTGCAAGCAAATATCCACACCAATGGAGGTTAACAAAAGTTCTGCATGCATAAAGGCAAGGATCTTGTAG

mRNA sequence

ATGGATGTTAAGAATGCCTTCTTAAATGGAGAGTTTGATCGAGATATATATATGGAGCAACCAAAAGGATTTAAGGATAAAATTCATCATGACTATGTCTGCAAGCTAAGAATATATGGCTTGAAGCAAGTTCCAAGAGCCTGGTACGGAAAGATTGCAAAATTTCTTGTTGAAAGTAGCTTTACAGTAGTTTCAGCCGATTCCAGTTTATTTGTCAAAGCTCAAGATTCAAAGGTCGCAATTATATTAGTCTATATGGATAATCTAATTATAACAGGAGACCACATAGATGAAGCTCGACAAATAAAGCAGAACCTACTAGTTCGTTTTGAAATGAAGGAACTTGGAGAACTAAAGCACTTTCTTGGATTAGAGATGGAATACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAGAAGTATGATATGACTGACTGCAAGCAAATATCCACACCAATGGAGGTTAACAAAAGTTCTGCATGCATAAAGGCAAGGATCTTGTAG

Coding sequence (CDS)

ATGGATGTTAAGAATGCCTTCTTAAATGGAGAGTTTGATCGAGATATATATATGGAGCAACCAAAAGGATTTAAGGATAAAATTCATCATGACTATGTCTGCAAGCTAAGAATATATGGCTTGAAGCAAGTTCCAAGAGCCTGGTACGGAAAGATTGCAAAATTTCTTGTTGAAAGTAGCTTTACAGTAGTTTCAGCCGATTCCAGTTTATTTGTCAAAGCTCAAGATTCAAAGGTCGCAATTATATTAGTCTATATGGATAATCTAATTATAACAGGAGACCACATAGATGAAGCTCGACAAATAAAGCAGAACCTACTAGTTCGTTTTGAAATGAAGGAACTTGGAGAACTAAAGCACTTTCTTGGATTAGAGATGGAATACTCAGAAAAAGGATTGTTTCTTGGACAACAAAAATATGTGAAGGATCTTCTACAGAAGTATGATATGACTGACTGCAAGCAAATATCCACACCAATGGAGGTTAACAAAAGTTCTGCATGCATAAAGGCAAGGATCTTGTAG

Protein sequence

MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNKSSACIKARIL

Homology

[Close]

BLAST of Cmc07g0191031 vs. NCBI nr
Match: KAA0035381.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 7.2e-89
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 60
           MDVKNAFLNGE DRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS
Sbjct: 288 MDVKNAFLNGELDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 347

Query: 61  FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 120
           FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH
Sbjct: 348 FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 407

Query: 121 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNKSSACIKARI 174
           FLGLEMEYSEKGLFLGQQKYVKDLLQKYDM+DCK ISTPMEVNKSSAC+KARI
Sbjct: 408 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKPISTPMEVNKSSACMKARI 460

[Close]

BLAST of Cmc07g0191031 vs. NCBI nr
Match: TYK03493.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 333.6 bits (854), Expect = 1.0e-87
Identity = 168/174 (96.55%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 60
           MDVKNAFLN EFDRDI +EQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS
Sbjct: 328 MDVKNAFLNEEFDRDICIEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 387

Query: 61  FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 120
           FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHID+ARQIKQNLLVRFEMKELGELKH
Sbjct: 388 FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDKARQIKQNLLVRFEMKELGELKH 447

Query: 121 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNKSSACIKARIL 175
           FLGLEMEYSEKGLFLGQQKYVKDLLQKYDM+DCK+ISTPMEVNKSSACIKARIL
Sbjct: 448 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKKISTPMEVNKSSACIKARIL 501

[Close]

BLAST of Cmc07g0191031 vs. NCBI nr
Match: KAA0046986.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-71
Identity = 140/166 (84.34%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
           M+VKNAFLNGE D+DIYMEQPKGF+DKI HDYVCKLR  +YGLKQ PRAWYGKIA+FLVE
Sbjct: 652 MNVKNAFLNGELDQDIYMEQPKGFEDKILHDYVCKLRKDLYGLKQAPRAWYGKIAEFLVE 711

Query: 61  SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
           S F V SADSSLFVKAQDSKV IILVY+D+LII GDHI+E RQIKQNLLVRFEMK+LGEL
Sbjct: 712 SGFAVASADSSLFVKAQDSKVVIILVYVDDLIIIGDHIEEVRQIKQNLLVRFEMKKLGEL 771

Query: 121 KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNK 165
           KHFLGLEMEYSEKGLFLGQQKYVKDLLQKY ++DCK IS PM+VNK
Sbjct: 772 KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYGVSDCKPISIPMKVNK 817

[Close]

BLAST of Cmc07g0191031 vs. NCBI nr
Match: XP_016903340.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >KAA0037683.1 putative mitochondrial protein [Cucumis melo var. makuwa] >TYK10690.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 2.8e-64
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 18  MEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQ 77
           MEQ KGF+DKIHHDYVCKLR  +YGLKQ PRAWY KIA+FLVES FTV SADSSLFVKAQ
Sbjct: 1   MEQSKGFEDKIHHDYVCKLRKPLYGLKQAPRAWYEKIAEFLVESGFTVASADSSLFVKAQ 60

Query: 78  DSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFL 137
           DSKVAIILVYMD+LIITGDHI+E RQIKQNLLV FEMKELGELKHFLGLEMEYSEKGLFL
Sbjct: 61  DSKVAIILVYMDDLIITGDHIEEVRQIKQNLLVCFEMKELGELKHFLGLEMEYSEKGLFL 120

Query: 138 GQQKYVKDLLQKYDMTDCKQISTPMEVNK 165
           GQQKYVKDLLQKY M+DCK IST MEVNK
Sbjct: 121 GQQKYVKDLLQKYGMSDCKPISTQMEVNK 149

[Close]

BLAST of Cmc07g0191031 vs. NCBI nr
Match: XP_039841768.1 (uncharacterized mitochondrial protein AtMg00810-like [Panicum virgatum])

HSP 1 Score: 234.6 bits (597), Expect = 6.6e-58
Identity = 113/165 (68.48%), Postives = 142/165 (86.06%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
           MDVKNAFL+GE D+DIY+EQP+GFK KIH DYV KL+  +YGLKQ PRAWYGKI +FLV+
Sbjct: 1   MDVKNAFLHGELDKDIYIEQPRGFKSKIHPDYVFKLKKELYGLKQAPRAWYGKIGEFLVQ 60

Query: 61  SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
           S F V  +DSSLFVKA++ ++AI+LVY+D+LIITGD+ +E ++ ++NL VRF+MKELGEL
Sbjct: 61  SGFKVAPSDSSLFVKAKEGRLAIVLVYVDDLIITGDYSEEIQRTRENLSVRFQMKELGEL 120

Query: 121 KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVN 164
           KHFLGLE+E +++GLFLGQQKY KDLLQ+Y M DCK ISTPM+ N
Sbjct: 121 KHFLGLEVERTKEGLFLGQQKYAKDLLQRYGMLDCKPISTPMDPN 165

[Close]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-30
Identity = 70/162 (43.21%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 1    MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
            +DV NAFL G    D+YM QP GF DK   +YVCKLR  +YGLKQ PRAWY ++  +L+ 
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
              F    +D+SLFV  +   +  +LVY+D+++ITG+          NL  RF +K+  EL
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPM 161
             +FLG+E +    GL L Q++Y+ DLL + +M   K ++TPM
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPM 1225

[Close]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 69/162 (42.59%), Postives = 100/162 (61.73%), Query Frame = 0


Query: 1    MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
            +DV NAFL G    ++YM QP GF DK   DYVC+LR  IYGLKQ PRAWY ++  +L+ 
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
              F    +D+SLFV  +   +  +LVY+D+++ITG+     +     L  RF +KE  +L
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPM 161
             +FLG+E +   +GL L Q++Y  DLL + +M   K ++TPM
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPM 1208

[Close]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 115.9 bits (289), Expect = 4.5e-25
Identity = 61/164 (37.20%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 1    MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
            MDVK AFLNG    +IYM  P+G     + D VCKL   IYGLKQ  R W+    + L E
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   SSFTVVSADSSLFV--KAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELG 120
              F   S D  +++  K   ++   +L+Y+D+++I    +      K+ L+ +F M +L 
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1120

Query: 121  ELKHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPM 161
            E+KHF+G+ +E  E  ++L Q  YVK +L K++M +C  +STP+
Sbjct: 1121 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPL 1162

[Close]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.0e-24
Identity = 59/165 (35.76%), Postives = 104/165 (63.03%), Query Frame = 0


Query: 1    MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
            +DVK AFL+G+ + +IYMEQP+GF+       VCKL   +YGLKQ PR WY K   F+  
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   SSFTVVSADSSLFVKA-QDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGE 120
             ++    +D  ++ K   ++   I+L+Y+D+++I G       ++K +L   F+MK+LG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  LKHFLGLEM--EYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPM 161
             +  LG+++  E + + L+L Q+KY++ +L++++M + K +STP+
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPL 1085

[Close]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 8.5e-16
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKL--RIYGLKQVPRAWYGKIAKFLVE 60
           MDV  AFLN   D  IY++QP GF ++ + DYV +L   +YGLKQ P  W   I   L +
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
             F     +  L+ ++       I VY+D+L++         ++KQ L   + MK+LG++
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 KHFLGLEMEYSEKG-LFLGQQKYVKDLLQKYDMTDCKQISTPM 161
             FLGL +  S  G + L  Q Y+     + ++   K   TP+
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPL 163

[Close]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL
Match: A0A5A7T1C6 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold597G00190 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.5e-89
Identity = 169/173 (97.69%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 60
           MDVKNAFLNGE DRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS
Sbjct: 288 MDVKNAFLNGELDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 347

Query: 61  FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 120
           FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH
Sbjct: 348 FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 407

Query: 121 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNKSSACIKARI 174
           FLGLEMEYSEKGLFLGQQKYVKDLLQKYDM+DCK ISTPMEVNKSSAC+KARI
Sbjct: 408 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKPISTPMEVNKSSACMKARI 460

[Close]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL
Match: A0A5D3BUX0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001130 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 5.0e-88
Identity = 168/174 (96.55%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 60
           MDVKNAFLN EFDRDI +EQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS
Sbjct: 328 MDVKNAFLNEEFDRDICIEQPKGFKDKIHHDYVCKLRIYGLKQVPRAWYGKIAKFLVESS 387

Query: 61  FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKH 120
           FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHID+ARQIKQNLLVRFEMKELGELKH
Sbjct: 388 FTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDKARQIKQNLLVRFEMKELGELKH 447

Query: 121 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNKSSACIKARIL 175
           FLGLEMEYSEKGLFLGQQKYVKDLLQKYDM+DCK+ISTPMEVNKSSACIKARIL
Sbjct: 448 FLGLEMEYSEKGLFLGQQKYVKDLLQKYDMSDCKKISTPMEVNKSSACIKARIL 501

[Close]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL
Match: A0A5A7TYD2 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001190 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 140/166 (84.34%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVE 60
           M+VKNAFLNGE D+DIYMEQPKGF+DKI HDYVCKLR  +YGLKQ PRAWYGKIA+FLVE
Sbjct: 652 MNVKNAFLNGELDQDIYMEQPKGFEDKILHDYVCKLRKDLYGLKQAPRAWYGKIAEFLVE 711

Query: 61  SSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGEL 120
           S F V SADSSLFVKAQDSKV IILVY+D+LII GDHI+E RQIKQNLLVRFEMK+LGEL
Sbjct: 712 SGFAVASADSSLFVKAQDSKVVIILVYVDDLIIIGDHIEEVRQIKQNLLVRFEMKKLGEL 771

Query: 121 KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPMEVNK 165
           KHFLGLEMEYSEKGLFLGQQKYVKDLLQKY ++DCK IS PM+VNK
Sbjct: 772 KHFLGLEMEYSEKGLFLGQQKYVKDLLQKYGVSDCKPISIPMKVNK 817

[Close]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL
Match: A0A5A7T3Y0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00570 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 18  MEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQ 77
           MEQ KGF+DKIHHDYVCKLR  +YGLKQ PRAWY KIA+FLVES FTV SADSSLFVKAQ
Sbjct: 1   MEQSKGFEDKIHHDYVCKLRKPLYGLKQAPRAWYEKIAEFLVESGFTVASADSSLFVKAQ 60

Query: 78  DSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFL 137
           DSKVAIILVYMD+LIITGDHI+E RQIKQNLLV FEMKELGELKHFLGLEMEYSEKGLFL
Sbjct: 61  DSKVAIILVYMDDLIITGDHIEEVRQIKQNLLVCFEMKELGELKHFLGLEMEYSEKGLFL 120

Query: 138 GQQKYVKDLLQKYDMTDCKQISTPMEVNK 165
           GQQKYVKDLLQKY M+DCK IST MEVNK
Sbjct: 121 GQQKYVKDLLQKYGMSDCKPISTQMEVNK 149

[Close]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL
Match: A0A1S4E5T6 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992132 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.3e-64
Identity = 131/149 (87.92%), Postives = 137/149 (91.95%), Query Frame = 0


Query: 18  MEQPKGFKDKIHHDYVCKLR--IYGLKQVPRAWYGKIAKFLVESSFTVVSADSSLFVKAQ 77
           MEQ KGF+DKIHHDYVCKLR  +YGLKQ PRAWY KIA+FLVES FTV SADSSLFVKAQ
Sbjct: 1   MEQSKGFEDKIHHDYVCKLRKPLYGLKQAPRAWYEKIAEFLVESGFTVASADSSLFVKAQ 60

Query: 78  DSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFL 137
           DSKVAIILVYMD+LIITGDHI+E RQIKQNLLV FEMKELGELKHFLGLEMEYSEKGLFL
Sbjct: 61  DSKVAIILVYMDDLIITGDHIEEVRQIKQNLLVCFEMKELGELKHFLGLEMEYSEKGLFL 120

Query: 138 GQQKYVKDLLQKYDMTDCKQISTPMEVNK 165
           GQQKYVKDLLQKY M+DCK IST MEVNK
Sbjct: 121 GQQKYVKDLLQKYGMSDCKPISTQMEVNK 149

[Close]

BLAST of Cmc07g0191031 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 62/167 (37.13%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 1   MDVKNAFLNGEFDRDIYMEQPKGFK----DKIHHDYVCKLR--IYGLKQVPRAWYGKIAK 60
           +D+ NAFLNG+ D +IYM+ P G+     D +  + VC L+  IYGLKQ  R W+ K + 
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  FLVESSFTVVSADSSLFVKAQDSKVAIILVYMDNLIITGDHIDEARQIKQNLLVRFEMKE 120
            L+   F    +D + F+K   +    +LVY+D++II  ++     ++K  L   F++++
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGELKHFLGLEMEYSEKGLFLGQQKYVKDLLQKYDMTDCKQISTPME 162
           LG LK+FLGLE+  S  G+ + Q+KY  DLL +  +  CK  S PM+
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359

[Close]

BLAST of Cmc07g0191031 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 0


Query: 82  ILVYMDNLIITGDHIDEARQIKQNLLVRFEMKELGELKHFLGLEMEYSEKGLFLGQQKYV 141
           +L+Y+D++++TG        +   L   F MK+LG + +FLG++++    GLFL Q KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 142 KDLLQKYDMTDCKQISTPMEVNKSSACIKAR 173
           + +L    M DCK +STP+ +  +S+   A+
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK 93

The following BLAST results are available for this feature:

BLAST of Cmc07g0191031 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0035381.1	7.2e-89	97.69	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK03493.1	1.0e-87	96.55	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0046986.1	2.3e-71	84.34	Integrase, catalytic core [Cucumis melo var. makuwa] >TYK04797.1 Integrase, cata...	[more]
XP_016903340.1	2.8e-64	87.92	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo] >...	[more]
XP_039841768.1	6.6e-58	68.48	uncharacterized mitochondrial protein AtMg00810-like [Panicum virgatum]	[more]

BLAST of Cmc07g0191031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.6e-30	43.21	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.8e-29	42.59	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	4.5e-25	37.20	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	1.0e-24	35.76	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P25600	8.5e-16	32.52	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc07g0191031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T1C6	3.5e-89	97.69	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BUX0	5.0e-88	96.55	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TYD2	1.1e-71	84.34	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7T3Y0	1.3e-64	87.92	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S4E5T6	1.3e-64	87.92	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]

BLAST of Cmc07g0191031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.5e-25	37.13	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.4e-10	34.07	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..161 e-value: 1.1E-40 score: 139.8
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..166
None	No IPR available	PANTHER	PTHR11439:SF351	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 1..166
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0191031.1	Cmc07g0191031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding