Cmc07g0190051 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0190051
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr07: 9001088 .. 9001810 (+)
RNA-Seq ExpressionCmc07g0190051
SyntenyCmc07g0190051
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTCGGCCATGCAATTAAAAAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAACTCAGGGGAGACAGTCCCTAAGGAGATCGTGCGCATGCTAGAGAAGTACCGTGATGTGATGCCTAAGTCTTTGCCACCTTGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTACAAAAGCTCCGTATGGAGCCCCAGTTCTTTTCCAGAAGAAAAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAACTCACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCAAAATATTTTTCAAAGTTAGACTTGCGGTCGGGGTACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTTTGTACGTTGATGAATCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAAGAACATAGAGACCACCTGTAA

mRNA sequence

ATGATCTCGGCCATGCAATTAAAAAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAACTCAGGGGAGACAGTCCCTAAGGAGATCGTGCGCATGCTAGAGAAGTACCGTGATGTGATGCCTAAGTCTTTGCCACCTTGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTACAAAAGCTCCGTATGGAGCCCCAGTTCTTTTCCAGAAGAAAAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAACTCACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCAAAATATTTTTCAAAGTTAGACTTGCGGTCGGGGTACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTTTGTACGTTGATGAATCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAAGAACATAGAGACCACCTGTAA

Coding sequence (CDS)

ATGATCTCGGCCATGCAATTAAAAAAGGGTCTCTCTCGAGACGAACCAACATTTATGGCCATCCCACTCAATTCGTCAGAGAACTCAGGGGAGACAGTCCCTAAGGAGATCGTGCGCATGCTAGAGAAGTACCGTGATGTGATGCCTAAGTCTTTGCCACCTTGGAGAATGATTGATCATGAGATCGAGTTGGTGCCAGGGGCAAAACCGCCTGCGAAGAATGCTTATCGTATGGCGCCTCCAGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTACAAAAGCTCCGTATGGAGCCCCAGTTCTTTTCCAGAAGAAAAAAGATGGGAGTTTACGATTGTGCATTGATTATCGTGTCCTGAATAAACTCACGGTTCGCAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCAAAATATTTTTCAAAGTTAGACTTGCGGTCGGGGTACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTCGTAATGCCATTTGGTCTCACCAATGCCCCTGCCACCTTTTGTACGTTGATGAATCAGGTCTTCCACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAAGAACATAGAGACCACCTGTAA

Protein sequence

MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVMPKSLPPWRMIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKKDGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL
Homology
[Close]
BLAST of Cmc07g0190051 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 476.9 bits (1226), Expect = 1.1e-130
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVR+LEKYRDVM    PKSLPP R
Sbjct: 563 MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRR 622

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 623 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 682

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 683 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 742

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 743 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 802

[Close]
BLAST of Cmc07g0190051 vs. NCBI nr
Match: KAA0060480.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 474.9 bits (1221), Expect = 4.0e-130
Identity = 233/244 (95.49%), Postives = 237/244 (97.13%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVR+LEKYRDVM    PKSLPPWR
Sbjct: 559 MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPWR 618

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRM+PPELAELRKQLDELLNAGFIRP KAPYGAP+LFQKKK
Sbjct: 619 MIDHEIELVPGAKPPAKNAYRMSPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKK 678

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 679 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 738

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATF TLMN+VFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 739 KTTCVTRYGAFEFLVMPFGLTNAPATFYTLMNKVFHEYLDKFVVVYLDDIVVYSTTMEEH 798

[Close]
BLAST of Cmc07g0190051 vs. NCBI nr
Match: TYK28653.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 473.8 bits (1218), Expect = 8.9e-130
Identity = 235/244 (96.31%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETV KEIVR+LEKYRDVM    PKSLPP R
Sbjct: 49  MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVSKEIVRVLEKYRDVMPDSLPKSLPPRR 108

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 109 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 168

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

[Close]
BLAST of Cmc07g0190051 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 233/244 (95.49%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPL SSENSGETVPKEI+R+LEKYRDVM    PKSLPP R
Sbjct: 589 MISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRR 648

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 649 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 708

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 709 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 768

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 769 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 828

[Close]
BLAST of Cmc07g0190051 vs. NCBI nr
Match: KAA0037220.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcriptase [Cucumis melo var. makuwa] >TYJ99001.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK01698.1 reverse transcriptase [Cucumis melo var. makuwa] >TYK02882.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129
Identity = 233/244 (95.49%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPL SSENSGETVPKEI+R+LEKYRDVM    PKSLPP R
Sbjct: 593 MISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRR 652

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 653 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 712

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 713 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 772

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 773 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 832

[Close]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-47
Identity = 90/125 (72.00%), Postives = 105/125 (84.00%), Query Frame = 0 

Query: 119 SLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKT 178
           SLR+CIDYR L K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 179 TCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVV---YSTTMEE 238
           TCVTRYG+FEF VMPFGLTNA ATFC LMN V +EYLD FVVVYLDD+VV   YS ++ E
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHE 124

Query: 239 HRDHL 241
           H  HL
Sbjct: 125 HIKHL 129

[Close]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 94/234 (40.17%), Postives = 141/234 (60.26%), Query Frame = 0 

Query: 17  TFMAIPLNSSENSGE----TVPKEIVRMLEKYRDVMPKSLPPWRM------IDHEIELVP 76
           T  ++  N++++S +    T+P   V + +KYR+++   LPP         + H+IE+ P
Sbjct: 536 TIQSVEPNATDHSNKDTFCTLP---VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKP 595

Query: 77  GAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKKDGSLRLCIDY 136
           GA+ P    Y +      E+ K + +LL+  FI P+K+P  +PV+   KKDG+ RLC+DY
Sbjct: 596 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 655

Query: 137 RVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGA 196
           R LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G 
Sbjct: 656 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 715

Query: 197 FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL 241
           +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S + EEH  HL
Sbjct: 716 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHL 764

[Close]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 94/234 (40.17%), Postives = 141/234 (60.26%), Query Frame = 0 

Query: 17  TFMAIPLNSSENSGE----TVPKEIVRMLEKYRDVMPKSLPPWRM------IDHEIELVP 76
           T  ++  N++++S +    T+P   V + +KYR+++   LPP         + H+IE+ P
Sbjct: 562 TIQSVEPNATDHSNKDTFCTLP---VWLQQKYREIIRNDLPPRPADINNIPVKHDIEIKP 621

Query: 77  GAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKKDGSLRLCIDY 136
           GA+ P    Y +      E+ K + +LL+  FI P+K+P  +PV+   KKDG+ RLC+DY
Sbjct: 622 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 681

Query: 137 RVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGA 196
           R LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  KT  VT  G 
Sbjct: 682 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 741

Query: 197 FEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL 241
           +E+ VMPFGL NAP+TF   M   F +   +FV VYLDDI+++S + EEH  HL
Sbjct: 742 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHL 790

[Close]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 75/211 (35.55%), Postives = 129/211 (61.14%), Query Frame = 0 

Query: 36  EIVRMLEKYRDVMPKS----LP-PWRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQ 95
           E+  + ++++D+  ++    LP P + ++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 96  LDELLNAGFIRPTKAPYGAPVLFQKKKDGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDR 155
           +++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ LNK    N YPLP+I  L  +
Sbjct: 433 INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 156 LHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 215
           + G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 216 VFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL 241
           +  E  +  VV Y+DDI+++S +  EH  H+
Sbjct: 553 ILGEAKESHVVCYMDDILIHSKSESEHVKHV 582

[Close]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.3e-34
Identity = 75/211 (35.55%), Postives = 129/211 (61.14%), Query Frame = 0 

Query: 36  EIVRMLEKYRDVMPKS----LP-PWRMIDHEIELV-PGAKPPAKNAYRMAPPELAELRKQ 95
           E+  + ++++D+  ++    LP P + ++ E+EL     + P +N Y + P ++  +  +
Sbjct: 373 ELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRN-YPLPPGKMQAMNDE 432

Query: 96  LDELLNAGFIRPTKAPYGAPVLFQKKKDGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDR 155
           +++ L +G IR +KA    PV+F  KK+G+LR+ +DY+ LNK    N YPLP+I  L  +
Sbjct: 433 INQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAK 492

Query: 156 LHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQ 215
           + G+  F+KLDL+S Y+ +R+ +GDE K       G FE+LVMP+G++ APA F   +N 
Sbjct: 493 IQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINT 552

Query: 216 VFHEYLDKFVVVYLDDIVVYSTTMEEHRDHL 241
           +  E  +  VV Y+DDI+++S +  EH  H+
Sbjct: 553 ILGEAKESHVVCYMDDILIHSKSESEHVKHV 582

[Close]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 5.1e-131
Identity = 236/244 (96.72%), Postives = 237/244 (97.13%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVR+LEKYRDVM    PKSLPP R
Sbjct: 563 MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPRR 622

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 623 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 682

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 683 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 742

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 743 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 802

[Close]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match: A0A5A7UZE9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G003130 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.9e-130
Identity = 233/244 (95.49%), Postives = 237/244 (97.13%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVR+LEKYRDVM    PKSLPPWR
Sbjct: 559 MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRVLEKYRDVMPDSLPKSLPPWR 618

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRM+PPELAELRKQLDELLNAGFIRP KAPYGAP+LFQKKK
Sbjct: 619 MIDHEIELVPGAKPPAKNAYRMSPPELAELRKQLDELLNAGFIRPAKAPYGAPILFQKKK 678

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 679 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 738

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATF TLMN+VFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 739 KTTCVTRYGAFEFLVMPFGLTNAPATFYTLMNKVFHEYLDKFVVVYLDDIVVYSTTMEEH 798

[Close]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match: A0A5D3DY42 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold165G00110 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.3e-130
Identity = 235/244 (96.31%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPLNSSENSGETV KEIVR+LEKYRDVM    PKSLPP R
Sbjct: 49  MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVSKEIVRVLEKYRDVMPDSLPKSLPPRR 108

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 109 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 168

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 169 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 228

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 229 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 288

[Close]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 233/244 (95.49%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPL SSENSGETVPKEI+R+LEKYRDVM    PKSLPP R
Sbjct: 593 MISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRR 652

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 653 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 712

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 713 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 772

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 773 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 832

[Close]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.3e-129
Identity = 233/244 (95.49%), Postives = 236/244 (96.72%), Query Frame = 0 

Query: 1   MISAMQLKKGLSRDEPTFMAIPLNSSENSGETVPKEIVRMLEKYRDVM----PKSLPPWR 60
           MISAMQLKKGLSRDEPTFMAIPL SSENSGETVPKEI+R+LEKYRDVM    PKSLPP R
Sbjct: 593 MISAMQLKKGLSRDEPTFMAIPLKSSENSGETVPKEIMRVLEKYRDVMPDSLPKSLPPRR 652

Query: 61  MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPTKAPYGAPVLFQKKK 120
           MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 653 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 712

Query: 121 DGSLRLCIDYRVLNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 180
           DGSLRLCIDYR LNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 713 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 772

Query: 181 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 240
           KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 773 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 832

The following BLAST results are available for this feature:
BLAST of Cmc07g0190051 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK07954.11.1e-13096.72reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0060480.14.0e-13095.49reverse transcriptase [Cucumis melo var. makuwa][more]
TYK28653.18.9e-13096.31reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0067557.12.6e-12995.49reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0037220.12.6e-12995.49reverse transcriptase [Cucumis melo var. makuwa] >TYJ95897.1 reverse transcripta... [more]
BLAST of Cmc07g0190051 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P318432.0e-4772.00RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1[more]
Q993151.7e-4340.17Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG51.7e-4340.17Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
P0CT414.3e-3435.55Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT344.3e-3435.55Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C9P85.1e-13196.72Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26... [more]
A0A5A7UZE91.9e-13095.49Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22... [more]
A0A5D3DY424.3e-13096.31Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16... [more]
A0A5D3C4R11.3e-12995.49Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
A0A5D3BRZ61.3e-12995.49Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11... [more]
BLAST of Cmc07g0190051 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 58..198
e-value: 4.7E-75
score: 253.5
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 31..224
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 31..224
NoneNo IPR availableCDDcd01647RT_LTRcoord: 97..240
e-value: 8.3229E-77
score: 227.864
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 138..240
e-value: 4.7E-75
score: 253.5
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 114..240
e-value: 3.2E-21
score: 75.9
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 94..240
score: 11.519988
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 42..240

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0190051.1Cmc07g0190051.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding