Cmc07g0189971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ARID domain-containing protein
Location	CMiso1.1chr07: 8899352 .. 8900260 (-)
RNA-Seq Expression	Cmc07g0189971
Synteny	Cmc07g0189971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTGAATAGAGAAAAATCTAAAGGTATCCCTTCTGCGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCATTTGGCTTTAATGCCAAACCCACTTTGTAGTCCAGCCAGAGGGTCTGATTCGAGTAAGTTTCGTCTTGATCACCGCCGATTTCATCGGCGGAGGAAGTCCGCCGAGAGTCCCGTGGTATGGGCGAAAGCCAAGACGATGGGGTCCGAGATTTCGGAACCCTCGTCACCCAAAGTGACTTGTGCGGGGCAGATAAAGATCAGGCCGAAGAATAGCAAGAGCTGGCAATCGGTGATGGAGGAGATAGAGAGAATTCATAACAGGAGAAAATTACGAAGAAGGAGGTTTCGTTGGGTTGAATCTTTTGGGTTCAAGAAAGATATTATGCAATTCTTAACGTGTTTGCGAACTATACGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAACAGATTTCACCACTGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGATGAGAAGAATCAAGTGGGTATTGAAGAAAATGAAAGCTCGAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAATGGGAGTAATGAGTTGAAGAGAGATAGCAAAAGTCTCTGTAATGAGGATGATGAATCGATTGAGGCAATAATGGCGCCACCCATAAACGCCCTTTTGCTTATGCGTTGTAGGTCTGCTCCGGCAAGAAGATGGATGGAAGAAGAATCTGAAGAAGGAGATGATGAAAAGGAAAAAGTGAAGGTGAAGAAAAGTTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTGTGGAAATGGGGACTGATTTCTGCAGAATGACATCGGATAATGCAAAAGAGTTTACAAGGAGTCAAAGTTGGAAAGTTTGA

mRNA sequence

ATGAAATTGAATAGAGAAAAATCTAAAGGTATCCCTTCTGCGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCATTTGGCTTTAATGCCAAACCCACTTTGTAGTCCAGCCAGAGGGTCTGATTCGAGTAAGTTTCGTCTTGATCACCGCCGATTTCATCGGCGGAGGAAGTCCGCCGAGAGTCCCGTGGTATGGGCGAAAGCCAAGACGATGGGGTCCGAGATTTCGGAACCCTCGTCACCCAAAGTGACTTGTGCGGGGCAGATAAAGATCAGGCCGAAGAATAGCAAGAGCTGGCAATCGGTGATGGAGGAGATAGAGAGAATTCATAACAGGAGAAAATTACGAAGAAGGAGGTTTCGTTGGGTTGAATCTTTTGGGTTCAAGAAAGATATTATGCAATTCTTAACGTGTTTGCGAACTATACGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAACAGATTTCACCACTGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGATGAGAAGAATCAAGTGGGTATTGAAGAAAATGAAAGCTCGAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAATGGGAGTAATGAGTTGAAGAGAGATAGCAAAAGTCTCTGTAATGAGGATGATGAATCGATTGAGGCAATAATGGCGCCACCCATAAACGCCCTTTTGCTTATGCGTTGTAGGTCTGCTCCGGCAAGAAGATGGATGGAAGAAGAATCTGAAGAAGGAGATGATGAAAAGGAAAAAGTGAAGGTGAAGAAAAGTTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTGTGGAAATGGGGACTGATTTCTGCAGAATGACATCGGATAATGCAAAAGAGTTTACAAGGAGTCAAAGTTGGAAAGTTTGA

Coding sequence (CDS)

ATGAAATTGAATAGAGAAAAATCTAAAGGTATCCCTTCTGCGGATTTGTTGGTTTGTTTTCCTTCTCGATCGCATTTGGCTTTAATGCCAAACCCACTTTGTAGTCCAGCCAGAGGGTCTGATTCGAGTAAGTTTCGTCTTGATCACCGCCGATTTCATCGGCGGAGGAAGTCCGCCGAGAGTCCCGTGGTATGGGCGAAAGCCAAGACGATGGGGTCCGAGATTTCGGAACCCTCGTCACCCAAAGTGACTTGTGCGGGGCAGATAAAGATCAGGCCGAAGAATAGCAAGAGCTGGCAATCGGTGATGGAGGAGATAGAGAGAATTCATAACAGGAGAAAATTACGAAGAAGGAGGTTTCGTTGGGTTGAATCTTTTGGGTTCAAGAAAGATATTATGCAATTCTTAACGTGTTTGCGAACTATACGGTTTGATTTTAGGTGTTTCAGAGCTTTCCCAGAAACAGATTTCACCACTGAAGAAGAAGAGGAAGAAGAAGAAGAAGAAGAAGATGAGAAGAATCAAGTGGGTATTGAAGAAAATGAAAGCTCGAGAACTGCATTTTCTAAATGGTTTATGGTTTTACAGGAAAATGGGAGTAATGAGTTGAAGAGAGATAGCAAAAGTCTCTGTAATGAGGATGATGAATCGATTGAGGCAATAATGGCGCCACCCATAAACGCCCTTTTGCTTATGCGTTGTAGGTCTGCTCCGGCAAGAAGATGGATGGAAGAAGAATCTGAAGAAGGAGATGATGAAAAGGAAAAAGTGAAGGTGAAGAAAAGTTTGAAATGGCTAATGGAGGAAGAGAACAGAGAGAGATTGGTTGTGGAAATGGGGACTGATTTCTGCAGAATGACATCGGATAATGCAAAAGAGTTTACAAGGAGTCAAAGTTGGAAAGTTTGA

Protein sequence

MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPARRWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSWKV

Homology

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BLAST of Cmc07g0189971 vs. NCBI nr
Match: XP_008444111.1 (PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa] >TYK18616.1 transcription initiation factor IIE subunit alpha-like [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 67

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 68  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 127

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 180
           RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE
Sbjct: 128 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 187

Query: 181 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 240
           NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR
Sbjct: 188 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 247

Query: 241 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 300
           RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW
Sbjct: 248 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 307

Query: 301 KV 303
           KV
Sbjct: 308 KV 309

[Close]

BLAST of Cmc07g0189971 vs. NCBI nr
Match: XP_004142611.2 (transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637.1 hypothetical protein Csa_012410 [Cucumis sativus])

HSP 1 Score: 547.0 bits (1408), Expect = 1.0e-151
Identity = 285/310 (91.94%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKLNREKSKGIPS+DLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLD+RR+HRRRKSAE
Sbjct: 11  MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRKSAE 70

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 71  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 130

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTT--EEEEEEEEEEEDEKNQVGI 180
            W+ESFGFKKDIMQFLTCLRT+RFDFRCFRAFPETDFTT  EEEEEEEEEEE+EKNQVGI
Sbjct: 131 NWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQVGI 190

Query: 181 EENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAP 240
           EENESSRTAFSKWFMVLQENGSNELKRDS S C EDDESIEA MAPP NALLLMRC+SAP
Sbjct: 191 EENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKSAP 250

Query: 241 ARRWMEEESEEGDD------EKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAK 300
           ARRWMEEESEE DD      EKEKVKVKKSLKWLMEEENRER+V+EMGTDFCRM SDNAK
Sbjct: 251 ARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDNAK 310

Query: 301 EFTRSQSWKV 303
           EFTRSQSWKV
Sbjct: 311 EFTRSQSWKV 320

[Close]

BLAST of Cmc07g0189971 vs. NCBI nr
Match: XP_038898663.1 (transcription initiation factor IIE subunit alpha [Benincasa hispida])

HSP 1 Score: 508.8 bits (1309), Expect = 3.1e-140
Identity = 272/321 (84.74%), Postives = 285/321 (88.79%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKL RE +KGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRL HR +HRRRKSAE
Sbjct: 1   MKLGRE-NKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLSHRHYHRRRKSAE 60

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEK--NQVGI 180
            WVES GFKKDIMQFLTCLR IRFDFRCFRAFP TDFTTEEEEEEEEEEE++   NQVG+
Sbjct: 121 HWVESLGFKKDIMQFLTCLRNIRFDFRCFRAFPATDFTTEEEEEEEEEEEEKSQGNQVGV 180

Query: 181 EENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAP 240
           +ENESSRTAFSKWFMVLQENGSNELKR+SK LC++DD SIEA MAPP NALLLMRCRSAP
Sbjct: 181 DENESSRTAFSKWFMVLQENGSNELKRESKILCSDDDVSIEAAMAPPKNALLLMRCRSAP 240

Query: 241 ARRWMEEESEE------GDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAK 300
           A+RW+EEESEE       DDEKE+VKVKKSLKWLMEEENRERLV+E GTDFCRMTSD AK
Sbjct: 241 AKRWLEEESEEEEDDDDDDDEKEEVKVKKSLKWLMEEENRERLVMETGTDFCRMTSDIAK 300

Query: 301 E-----------FTRSQSWKV 303
           E           FTRS SWKV
Sbjct: 301 ETWVVSEKSRDLFTRSHSWKV 320

[Close]

BLAST of Cmc07g0189971 vs. NCBI nr
Match: XP_022147766.1 (uncharacterized protein LOC111016595 [Momordica charantia])

HSP 1 Score: 403.3 bits (1035), Expect = 1.9e-108
Identity = 230/330 (69.70%), Postives = 257/330 (77.88%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 60
           MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  S
Sbjct: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60

Query: 61  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120

Query: 121 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEED---EK 180
           RRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+   ++
Sbjct: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180

Query: 181 NQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMR 240
           NQVG+E NESSRTAFSKWFMVLQE+G+      S  +C    ES    +APP NALLLMR
Sbjct: 181 NQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLMR 240

Query: 241 CRSAPARRWMEEESEEGDDEKE---------------KVKVKKSLKWLMEEENRERLVVE 300
           CRSAPA+ W EEE EE ++E+E               +VKVKKSLKWLMEEENRERLV+E
Sbjct: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVME 300

Query: 301 MGTDFCRMTSDNAKE-------FTRSQSWK 302
           MG DFCRM+S+ AKE       F+RS+SWK
Sbjct: 301 MGPDFCRMSSEIAKETWVGRDLFSRSRSWK 320

[Close]

BLAST of Cmc07g0189971 vs. NCBI nr
Match: XP_023523446.1 (uncharacterized protein LOC111787660 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.3 bits (939), Expect = 2.5e-97
Identity = 211/304 (69.41%), Postives = 236/304 (77.63%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRF-HRRRKSA 60
           MKL RE +KGI S DLLVCFPSRS LALMPNPLCSP RGSDSSK R   R + HRRRKSA
Sbjct: 68  MKLGRE-AKGISSTDLLVCFPSRSRLALMPNPLCSPVRGSDSSKLRRSRRSYHHRRRKSA 127

Query: 61  ESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKL-RRR 120
           ESPVVWAKAKTMGSE+SEPSSPKVTCAGQ+K+R KN + WQSVMEEIERIHNRRKL RRR
Sbjct: 128 ESPVVWAKAKTMGSEMSEPSSPKVTCAGQVKMRRKNRERWQSVMEEIERIHNRRKLRRRR 187

Query: 121 RFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGI 180
           R  WVES GFKKDIMQ LTCLR++RFDFRCFRAFPE DFTTEE+E+EEEEEE+E+ +   
Sbjct: 188 RVNWVESLGFKKDIMQMLTCLRSLRFDFRCFRAFPEADFTTEEDEDEEEEEEEEEEE--- 247

Query: 181 EENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAP 240
           EE+ESSR AFSKWFMVLQEN          + C  DD   +A +APP NALLLMRCRSAP
Sbjct: 248 EESESSRAAFSKWFMVLQEN-------RMMNGCAVDD---DAPVAPPKNALLLMRCRSAP 307

Query: 241 ARRWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQ 300
           A+ W+EE+ +         K KKSLKWLMEEENRERL +E GT+  R    +    TRS+
Sbjct: 308 AKSWVEEKVK---------KKKKSLKWLMEEENRERLAMEKGTEISR---TSPYWLTRSR 345

Query: 301 SWKV 303
           SWKV
Sbjct: 368 SWKV 345

[Close]

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL
Match: A0A5D3D503 (Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001490 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 67

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 68  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 127

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 180
           RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE
Sbjct: 128 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 187

Query: 181 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 240
           NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR
Sbjct: 188 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 247

Query: 241 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 300
           RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW
Sbjct: 248 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 307

Query: 301 KV 303
           KV
Sbjct: 308 KV 309

[Close]

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL
Match: A0A1S3B949 (uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-164
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE
Sbjct: 8   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 67

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 68  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 127

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 180
           RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE
Sbjct: 128 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEE 187

Query: 181 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 240
           NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR
Sbjct: 188 NESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPAR 247

Query: 241 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 300
           RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW
Sbjct: 248 RWMEEESEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSW 307

Query: 301 KV 303
           KV
Sbjct: 308 KV 309

[Close]

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL
Match: A0A0A0L1Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.0e-152
Identity = 285/310 (91.94%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAE 60
           MKLNREKSKGIPS+DLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLD+RR+HRRRKSAE
Sbjct: 1   MKLNREKSKGIPSSDLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDYRRYHRRRKSAE 60

Query: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120
           SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF
Sbjct: 61  SPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRF 120

Query: 121 RWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTT--EEEEEEEEEEEDEKNQVGI 180
            W+ESFGFKKDIMQFLTCLRT+RFDFRCFRAFPETDFTT  EEEEEEEEEEE+EKNQVGI
Sbjct: 121 NWIESFGFKKDIMQFLTCLRTMRFDFRCFRAFPETDFTTEEEEEEEEEEEEEEEKNQVGI 180

Query: 181 EENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAP 240
           EENESSRTAFSKWFMVLQENGSNELKRDS S C EDDESIEA MAPP NALLLMRC+SAP
Sbjct: 181 EENESSRTAFSKWFMVLQENGSNELKRDSNSRCYEDDESIEATMAPPRNALLLMRCKSAP 240

Query: 241 ARRWMEEESEEGDD------EKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAK 300
           ARRWMEEESEE DD      EKEKVKVKKSLKWLMEEENRER+V+EMGTDFCRM SDNAK
Sbjct: 241 ARRWMEEESEEEDDEKEKEKEKEKVKVKKSLKWLMEEENRERVVMEMGTDFCRMISDNAK 300

Query: 301 EFTRSQSWKV 303
           EFTRSQSWKV
Sbjct: 301 EFTRSQSWKV 310

[Close]

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL
Match: A0A6J1D3C2 (uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016595 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.0e-109
Identity = 230/330 (69.70%), Postives = 257/330 (77.88%), Query Frame = 0


Query: 1   MKLNREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRK--S 60
           MKL R+ +K I SADLLVCFPSRS+L LMP PLCSPARG DS+K R  HR  HRRRK  S
Sbjct: 1   MKLGRD-AKAIHSADLLVCFPSRSNLTLMPKPLCSPARGLDSNKLRRSHRHHHRRRKSTS 60

Query: 61  AESPVVWAKAKTMGSEISEPSSPKVTCAGQIKIRPK--NSKSWQSVMEEIERIHNRRKLR 120
           A SP++WAK KTMGSEISEPSSPKVTCAGQIKIRPK  + KSWQSVMEEIERIHNRRKLR
Sbjct: 61  AASPLIWAKPKTMGSEISEPSSPKVTCAGQIKIRPKTGSCKSWQSVMEEIERIHNRRKLR 120

Query: 121 RRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEED---EK 180
           RRR  WVES GFKKDIMQFLTCLR IRFDFRCF+AFPE DFTTEEE+EEEEEEE+   ++
Sbjct: 121 RRRSNWVESLGFKKDIMQFLTCLRNIRFDFRCFKAFPEADFTTEEEDEEEEEEEEGKSQE 180

Query: 181 NQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMR 240
           NQVG+E NESSRTAFSKWFMVLQE+G+      S  +C    ES    +APP NALLLMR
Sbjct: 181 NQVGVEGNESSRTAFSKWFMVLQESGA------SNGICR---ESNGPPLAPPKNALLLMR 240

Query: 241 CRSAPARRWMEEESEEGDDEKE---------------KVKVKKSLKWLMEEENRERLVVE 300
           CRSAPA+ W EEE EE ++E+E               +VKVKKSLKWLMEEENRERLV+E
Sbjct: 241 CRSAPAKSWQEEEEEEEEEEEEEEEEEEEAAAEEDEKEVKVKKSLKWLMEEENRERLVME 300

Query: 301 MGTDFCRMTSDNAKE-------FTRSQSWK 302
           MG DFCRM+S+ AKE       F+RS+SWK
Sbjct: 301 MGPDFCRMSSEIAKETWVGRDLFSRSRSWK 320

[Close]

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL
Match: A0A6J1FBW7 (uncharacterized protein LOC111442647 OS=Cucurbita moschata OX=3662 GN=LOC111442647 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.0e-96
Identity = 205/297 (69.02%), Postives = 229/297 (77.10%), Query Frame = 0


Query: 8   SKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAESPVVWAK 67
           +K  PS DLLVCFPSRSH ALMPNPLCSPAR SDS+K     RR+HRRRKSAESPVVWAK
Sbjct: 7   TKANPSPDLLVCFPSRSHFALMPNPLCSPARASDSNKL----RRYHRRRKSAESPVVWAK 66

Query: 68  AKTM-GSEISEPSSPKVTCAGQIKIRPKNSKSWQSVMEEIERIHNRRKLRRRRFRWVESF 127
           AKTM GSE+SEPSSPKVTCAGQIK+RPK+ KSW+SVMEEIERIHNRR+LRRRRF WVES 
Sbjct: 67  AKTMGGSEVSEPSSPKVTCAGQIKMRPKSRKSWESVMEEIERIHNRRELRRRRFNWVESL 126

Query: 128 GFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEENESSRT 187
           GFKKDIMQFLTCLR++RFDF CF AFPE +FT+E+EEEEE         VG+E ++ SRT
Sbjct: 127 GFKKDIMQFLTCLRSLRFDFGCFGAFPEAEFTSEDEEEEE---------VGVEGSDGSRT 186

Query: 188 AFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPARRWMEEE 247
           AFSKWFMVLQ +G   ++RD   LC  DD SI   MAPP NALLLMRCRSAPA+ W+EE 
Sbjct: 187 AFSKWFMVLQGSG---VRRDGNGLCTVDDASIGPPMAPPRNALLLMRCRSAPAKSWVEEG 246

Query: 248 -SEEGDDEKEKVKVKKSLKWLMEEENRERLVVEMGTDFCRMTSDNAKEFTRSQSWKV 303
            SEEG  E+ +VKVKKSLKWLMEEENRE                +    TRSQSWKV
Sbjct: 247 CSEEG--EETEVKVKKSLKWLMEEENRE----------------SRDLVTRSQSWKV 269

[Close]

BLAST of Cmc07g0189971 vs. TAIR 10
Match: AT1G78110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22230.1); Has 5452 Blast hits to 3541 proteins in 289 species: Archae - 4; Bacteria - 165; Metazoa - 1756; Fungi - 532; Plants - 205; Viruses - 141; Other Eukaryotes - 2649 (source: NCBI BLink). )

HSP 1 Score: 252.7 bits (644), Expect = 3.8e-67
Identity = 165/341 (48.39%), Postives = 213/341 (62.46%), Query Frame = 0


Query: 4   NREKSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSA---- 63
           NR  S    SADLLVCFPSR+HLAL P P+CSP+R SDSS  R  H R    + S     
Sbjct: 8   NRGSSSSGYSADLLVCFPSRTHLALTPKPICSPSRPSDSSTNRRPHHRRQLSKLSGGGGG 67

Query: 64  --ESPVVWAK---AKTM-GSEISEPSSPKVTCAGQIKIRPK----NSKSWQSVMEEIERI 123
              SPV+WAK   +K M G EI+EP+SPKVTCAGQIK+RP       K+WQSVMEEIERI
Sbjct: 68  GHGSPVLWAKQASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERI 127

Query: 124 HNRRKLRRRRFRWVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEE 183
           H+ R   +        FG KKD+M FLTCLR I+FDFRCF  F   D T++++EEE++++
Sbjct: 128 HDNRSQSK-------FFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTSDDDEEEDDDD 187

Query: 184 EDEKNQVGIEENESSRTAFSKWFMVLQENGSNELKRDSKSLCNE--DDESIEAIMA-PPI 243
           ++E+  V  EE E+S+T FSKWFMVLQE  +N+    + + C+E  D E  E   A PP 
Sbjct: 188 DEEEEVVEGEEEENSKTVFSKWFMVLQEEQNNKDDDKNNNKCDEKRDLEDTETEPAVPPP 247

Query: 244 NALLLMRCRSAPARRWMEE---------------ESEEGDDEKEKVKV-KKSLKWLMEEE 302
           NALLLMRCRSAPA+ W+EE               E +E +D++  +K  KK L+ LMEEE
Sbjct: 248 NALLLMRCRSAPAKSWLEERMKVKTEQEKREEQKEEKETEDQETSMKTKKKDLRSLMEEE 307

[Close]

BLAST of Cmc07g0189971 vs. TAIR 10
Match: AT1G22230.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78110.1); Has 2358 Blast hits to 1759 proteins in 159 species: Archae - 2; Bacteria - 36; Metazoa - 1046; Fungi - 203; Plants - 157; Viruses - 72; Other Eukaryotes - 842 (source: NCBI BLink). )

HSP 1 Score: 193.7 bits (491), Expect = 2.1e-49
Identity = 145/325 (44.62%), Postives = 191/325 (58.77%), Query Frame = 0


Query: 7   KSKGIPSADLLVCFPSRSHLALMPNPLCSPARGSDSSKFRLDHRRFHRRRKSAESPVVWA 66
           KS G  SADL+VCFPSR+HL+L    + SP+   +  +    HRR   +  S+   V   
Sbjct: 8   KSSGY-SADLMVCFPSRAHLSLPSKSISSPSSSFNRRQNAPHHRRSISKLSSSGGGV--R 67

Query: 67  KAKTMGSE-ISEPSSPKVTCAGQIKIRPK----NSKSWQSVMEEIERIHNRRKLRRRRFR 126
           + +  G E + EP+SPKVTCAGQIK+R        K+WQS+M EIE+IH  R     +F 
Sbjct: 68  QNRGGGREVVEEPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIH--RSKSESKF- 127

Query: 127 WVESFGFKKDIMQFLTCLRTIRFDFRCFRAFPETDFTTEEEEEEEEEEEDEKNQVGIEEN 186
               FG K+D+M FLTCLR   FDFRCF AFP  D  +++EEE+EEEEE+++ +   +E+
Sbjct: 128 ----FGIKRDVMGFLTCLRD--FDFRCFGAFPPVDIISDDEEEDEEEEEEDEEE---DED 187

Query: 187 ESSRTAFSKWFMVLQENGSNELKRDSKSLCNEDDESIEAIMAPPINALLLMRCRSAPARR 246
           ESS T FSKW MVL E  +NE   D K     D E+      PP NALLLMRCRSAP + 
Sbjct: 188 ESSGTVFSKWLMVLHEKQNNEECVDGKENVFSDVET----AVPPPNALLLMRCRSAPVKN 247

Query: 247 WME---EESEEGD-----------DEKEKVKVKKSLKWLMEEENRERLVV-EMGTDFCRM 302
           W E   EE+EEGD           +EK++V  KK L+ LMEEE +  LVV    T++ ++
Sbjct: 248 WSEEKKEETEEGDNRVKQSGEEEEEEKDRVGNKKDLRSLMEEEKKMNLVVMNYDTNYYKL 307

The following BLAST results are available for this feature:

BLAST of Cmc07g0189971 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008444111.1	2.4e-164	100.00	PREDICTED: uncharacterized protein LOC103487551 [Cucumis melo] >KAA0064246.1 tra...	[more]
XP_004142611.2	1.0e-151	91.94	transcription initiation factor IIE subunit alpha [Cucumis sativus] >KAE8649637....	[more]
XP_038898663.1	3.1e-140	84.74	transcription initiation factor IIE subunit alpha [Benincasa hispida]	[more]
XP_022147766.1	1.9e-108	69.70	uncharacterized protein LOC111016595 [Momordica charantia]	[more]
XP_023523446.1	2.5e-97	69.41	uncharacterized protein LOC111787660 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc07g0189971 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0189971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D503	1.2e-164	100.00	Transcription initiation factor IIE subunit alpha-like OS=Cucumis melo var. maku...	[more]
A0A1S3B949	1.2e-164	100.00	uncharacterized protein LOC103487551 OS=Cucumis melo OX=3656 GN=LOC103487551 PE=...	[more]
A0A0A0L1Z4	5.0e-152	91.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G377750 PE=4 SV=1	[more]
A0A6J1D3C2	9.0e-109	69.70	uncharacterized protein LOC111016595 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1FBW7	1.0e-96	69.02	uncharacterized protein LOC111442647 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]

BLAST of Cmc07g0189971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78110.1	3.8e-67	48.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G22230.1	2.1e-49	44.62	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..176
None	No IPR available	PANTHER	PTHR33448	CHLOROPLAST PROTEIN HCF243-RELATED	coord: 4..293
None	No IPR available	PANTHER	PTHR33448:SF3	OS09G0370000 PROTEIN	coord: 4..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189971.1	Cmc07g0189971.1	mRNA