Cmc07g0189731 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189731
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 8467758 .. 8468129 (-)
RNA-Seq Expression	Cmc07g0189731
Synteny	Cmc07g0189731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTTCTCGAAGAACTTCCAAGATTACCTCCTCATAAAGAGTGATTTTACTATTGAGCTGGAACCTAGTACTGTTCCTATATCTAGAGCTCCATACAGAATGGCCCTAGCAGAGTTGAAAGAGCTGAAAGTGCAGTTAGAGGAGTTGCTTGACAAAGGTTTCATTCGACTGAGTGTGTCACCTTGGGGTGCACCGATTTTGTTTGTTAAAAAGAAGGATGGTTCGATGCGCTTATTTATTGACTACAGAGACTTGAATAAGGTAACTGTTAAGAACAAATATCCTTTTTCCAGGATCGATGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATCGACCTCCGGTCAGGATATCATTAA

mRNA sequence

ATGTTTTTCTCGAAGAACTTCCAAGATTACCTCCTCATAAAGAGTGATTTTACTATTGAGCTGGAACCTAGTACTGTTCCTATATCTAGAGCTCCATACAGAATGGCCCTAGCAGAGTTGAAAGAGCTGAAAGTGCAGTTAGAGGAGTTGCTTGACAAAGGTTTCATTCGACTGAGTGTGTCACCTTGGGGTGCACCGATTTTGTTTGTTAAAAAGAAGGATGGTTCGATGCGCTTATTTATTGACTACAGAGACTTGAATAAGGTAACTGTTAAGAACAAATATCCTTTTTCCAGGATCGATGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATCGACCTCCGGTCAGGATATCATTAA

Coding sequence (CDS)

ATGTTTTTCTCGAAGAACTTCCAAGATTACCTCCTCATAAAGAGTGATTTTACTATTGAGCTGGAACCTAGTACTGTTCCTATATCTAGAGCTCCATACAGAATGGCCCTAGCAGAGTTGAAAGAGCTGAAAGTGCAGTTAGAGGAGTTGCTTGACAAAGGTTTCATTCGACTGAGTGTGTCACCTTGGGGTGCACCGATTTTGTTTGTTAAAAAGAAGGATGGTTCGATGCGCTTATTTATTGACTACAGAGACTTGAATAAGGTAACTGTTAAGAACAAATATCCTTTTTCCAGGATCGATGATCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATCGACCTCCGGTCAGGATATCATTAA

Protein sequence

MFFSKNFQDYLLIKSDFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDGSMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH

Homology

[Close]

BLAST of Cmc07g0189731 vs. NCBI nr
Match: KAA0060202.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 7.5e-48
Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEP TVPISRAPYRMALAELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 460 EFAIELEPGTVPISRAPYRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 519

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 520 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 567

[Close]

BLAST of Cmc07g0189731 vs. NCBI nr
Match: KAA0063098.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 200.3 bits (508), Expect = 9.7e-48
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           DF IELEP T PISRAPYRMALAELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 580 DFAIELEPGTAPISRAPYRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 639

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVT+KN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 640 SMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 687

[Close]

BLAST of Cmc07g0189731 vs. NCBI nr
Match: KAA0026020.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEPS VPISRAPYRMA AELKELKVQL+ELLDKGFIR SVSPWGAPILFVKKKDG
Sbjct: 662 EFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPILFVKKKDG 721

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP SRIDDLFDQLQGATVFSKIDL+SGYH
Sbjct: 722 SMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYH 769

[Close]

BLAST of Cmc07g0189731 vs. NCBI nr
Match: XP_031745581.1 (uncharacterized protein LOC116406021 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 3.7e-47
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           DF IELEP+T PISRAPYRMA AELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 341 DFAIELEPNTTPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 400

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 401 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 448

[Close]

BLAST of Cmc07g0189731 vs. NCBI nr
Match: KAA0039053.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 198.4 bits (503), Expect = 3.7e-47
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEP TVPISRAPYRMA AELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 584 EFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRSSVSPWGAPVLFVKKKDG 643

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 644 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 691

[Close]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 19  IELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDGSMR 78
           IE++P        PY +     +E+   +++LLD  FI  S SP  +P++ V KKDG+ R
Sbjct: 588 IEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFR 647

Query: 79  LFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           L +DYR LNK T+ + +P  RID+L  ++  A +F+ +DL SGYH
Sbjct: 648 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYH 692

[Close]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.4e-17
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0


Query: 19  IELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDGSMR 78
           IE++P        PY +     +E+   +++LLD  FI  S SP  +P++ V KKDG+ R
Sbjct: 614 IEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFR 673

Query: 79  LFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           L +DYR LNK T+ + +P  RID+L  ++  A +F+ +DL SGYH
Sbjct: 674 LCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYH 718

[Close]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-15
Identity = 36/108 (33.33%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F +EL      +    Y +   +++ +  ++ + L  G IR S +    P++FV KK+G
Sbjct: 401 EFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEG 460

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           ++R+ +DY+ LNK    N YP   I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 461 TLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-15
Identity = 36/108 (33.33%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F +EL      +    Y +   +++ +  ++ + L  G IR S +    P++FV KK+G
Sbjct: 401 EFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEG 460

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           ++R+ +DY+ LNK    N YP   I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 461 TLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 5.1e-15
Identity = 36/108 (33.33%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F +EL      +    Y +   +++ +  ++ + L  G IR S +    P++FV KK+G
Sbjct: 401 EFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEG 460

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           ++R+ +DY+ LNK    N YP   I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 461 TLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 508

[Close]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL
Match: A0A5A7UWI4 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold386G00180 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.6e-48
Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEP TVPISRAPYRMALAELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 460 EFAIELEPGTVPISRAPYRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 519

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 520 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 567

[Close]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL
Match: A0A5A7V646 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1337G00030 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.7e-48
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           DF IELEP T PISRAPYRMALAELKELKVQL+ELLDKGFIR SVSPWGAP+LFVKKKDG
Sbjct: 580 DFAIELEPGTAPISRAPYRMALAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDG 639

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVT+KN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 640 SMRLCIDYRELNKVTIKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 687

[Close]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL
Match: A0A5A7SIL8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003470 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-47
Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEPS VPISRAPYRMA AELKELKVQL+ELLDKGFIR SVSPWGAPILFVKKKDG
Sbjct: 662 EFAIELEPSIVPISRAPYRMATAELKELKVQLQELLDKGFIRPSVSPWGAPILFVKKKDG 721

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP SRIDDLFDQLQGATVFSKIDL+SGYH
Sbjct: 722 SMRLCIDYRELNKVTVKNRYPLSRIDDLFDQLQGATVFSKIDLQSGYH 769

[Close]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL
Match: A0A5D3E4J1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G00160 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.8e-47
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEP TVPISRAPYRMA AELKELKVQL+ELLDKGFIRLSVSPWGAP+LF KKKDG
Sbjct: 331 EFIIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFFKKKDG 390

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 391 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 438

[Close]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL
Match: A0A5A7T287 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold285G004310 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.8e-47
Identity = 96/108 (88.89%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 16  DFTIELEPSTVPISRAPYRMALAELKELKVQLEELLDKGFIRLSVSPWGAPILFVKKKDG 75
           +F IELEP TVPISRAPYRMA AELKELKVQL+ELLDKGFIRLSVSPWGAP+LF KKKDG
Sbjct: 331 EFIIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRLSVSPWGAPVLFFKKKDG 390

Query: 76  SMRLFIDYRDLNKVTVKNKYPFSRIDDLFDQLQGATVFSKIDLRSGYH 124
           SMRL IDYR+LNKVTVKN+YP  RIDDLFDQLQGATVFSKIDLRSGYH
Sbjct: 391 SMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 438

The following BLAST results are available for this feature:

BLAST of Cmc07g0189731 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060202.1	7.5e-48	89.81	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063098.1	9.7e-48	88.89	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026020.1	2.8e-47	89.81	pol protein [Cucumis melo var. makuwa]	[more]
XP_031745581.1	3.7e-47	88.89	uncharacterized protein LOC116406021 [Cucumis sativus]	[more]
KAA0039053.1	3.7e-47	88.89	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0189731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.4e-17	40.00	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.4e-17	40.00	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	5.1e-15	33.33	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	5.1e-15	33.33	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	5.1e-15	33.33	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWI4	3.6e-48	89.81	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7V646	4.7e-48	88.89	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7SIL8	1.4e-47	89.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5D3E4J1	1.8e-47	88.89	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T287	1.8e-47	88.89	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc07g0189731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 17..123 e-value: 4.1E-41 score: 142.6
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 16..123
None	No IPR available	PANTHER	PTHR24559:SF382	SUBFAMILY NOT NAMED	coord: 16..123
None	No IPR available	CDD	cd01647	RT_LTR	coord: 54..123 e-value: 1.68595E-30 score: 105.37
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 95..122 e-value: 4.1E-41 score: 142.6
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 16..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189731.1	Cmc07g0189731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding