Cmc07g0189671 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189671
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 8409241 .. 8410137 (+)
RNA-Seq Expression	Cmc07g0189671
Synteny	Cmc07g0189671

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTATCAGTGAAGATTTGGAGACATTATTTATTCGGCGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTAAGACAGAGGCGATGGCTAGAACTAATCAAAGACTATGATTGTACCATAGAATATCATCCTGGTAAGGCTAACGTGGTAGCAGATGAATTAAGTAGGAAGTCGAGACTTTCAAAGAGTGCTTTGTGTGGTATTCGAGCAAGCTTGCTAAGTGAGTTAAGAGGTTTCAAAGCAGTTATGACTGCAGAAAGCTCATGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTCCCTTAGTAGCAGAGATTGTAGGAAGACAACCAGAGGATAGTAATTTGCAGAAAATGCTTGCAAAGGCCAAGCAAGGCCCAAAGGTAGAATTTGAGTTGAGAATGGATGGAGCCATAGTTAAGCAAGGAAGATTATGCATTCCGAATTTTACTGAGCTTAAGGTTGCTATACTAGAAGAAGCTCACAATTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGTTGTACTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACGAGTGAGGCAGAGGTCGGGAGGACTTCTTAATCCCCTGCCTGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATCGATAATAGTAGATAGACTCACCGATTAA

mRNA sequence

ATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTATCAGTGAAGATTTGGAGACATTATTTATTCGGCGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTAAGACAGAGGCGATGGCTAGAACTAATCAAAGACTATGATTGTACCATAGAATATCATCCTGGTAAGGCTAACGTGGTAGCAGATGAATTAAGTAGGAAGTCGAGACTTTCAAAGAGTGCTTTGTGTGGTATTCGAGCAAGCTTGCTAAGTGAGTTAAGAGGTTTCAAAGCAGTTATGACTGCAGAAAGCTCATGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTCCCTTAGTAGCAGAGATTGTAGGAAGACAACCAGAGGATAGTAATTTGCAGAAAATGCTTGCAAAGGCCAAGCAAGGCCCAAAGGTAGAATTTGAGTTGAGAATGGATGGAGCCATAGTTAAGCAAGGAAGATTATGCATTCCGAATTTTACTGAGCTTAAGGTTGCTATACTAGAAGAAGCTCACAATTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGTTGTACTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACGAGTGAGGCAGAGGTCGGGAGGACTTCTTAATCCCCTGCCTGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATCGATAATAGTAGATAGACTCACCGATTAA

Coding sequence (CDS)

ATGCAGGAAGGGAAAGTAATAGCTTATACTTCAAGGCAGTTGAAGAAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTCTATCAGTGAAGATTTGGAGACATTATTTATTCGGCGAGAAGTGCCACATTTTCACAGATCATAAAAGTCTGAAGTACATCTTTGATCAGAAAGAGCTGAATCTAAGACAGAGGCGATGGCTAGAACTAATCAAAGACTATGATTGTACCATAGAATATCATCCTGGTAAGGCTAACGTGGTAGCAGATGAATTAAGTAGGAAGTCGAGACTTTCAAAGAGTGCTTTGTGTGGTATTCGAGCAAGCTTGCTAAGTGAGTTAAGAGGTTTCAAAGCAGTTATGACTGCAGAAAGCTCATGGAGTCTTTTAGCTCAATTTCAGGTTAGGTCTCCCTTAGTAGCAGAGATTGTAGGAAGACAACCAGAGGATAGTAATTTGCAGAAAATGCTTGCAAAGGCCAAGCAAGGCCCAAAGGTAGAATTTGAGTTGAGAATGGATGGAGCCATAGTTAAGCAAGGAAGATTATGCATTCCGAATTTTACTGAGCTTAAGGTTGCTATACTAGAAGAAGCTCACAATTCAGCTTACGCTATGCATCCAGGAAGCACCAAGATGTATAGAACTCTGAAGAAGACTTATTGTTGTACTGGTATGAAGCGAGAGATAGTTGAATATGTCGATAGATGTTTGATCTGTCAACAGGTTAAACGAGTGAGGCAGAGGTCGGGAGGACTTCTTAATCCCCTGCCTGTGCCAGAGTGGAAGTGGGAGCATATTACCATGGATTTTCTGTTTGGATTACCCCGTACATCTAGAGGATATGATGGTATATCGATAATAGTAGATAGACTCACCGATTAA

Protein sequence

MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLTD

Homology

[Close]

BLAST of Cmc07g0189671 vs. NCBI nr
Match: TYK17971.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 531.6 bits (1368), Expect = 4.5e-147
Identity = 263/297 (88.55%), Postives = 274/297 (92.26%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            M+EGKVIAYTSRQLKKHECNYPT DLELAAVVL++KIWRHYLFGEKCHIF DHKSLKYIF
Sbjct: 967  MKEGKVIAYTSRQLKKHECNYPTLDLELAAVVLALKIWRHYLFGEKCHIFADHKSLKYIF 1026

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYH GKANVVAD LSRKSRL KSALCGIRASLLSELR
Sbjct: 1027 DQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSRLPKSALCGIRASLLSELR 1086

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            GFKAVM AESS SLLAQFQ+RS LVAEIVGRQPEDSNLQKMLAKAKQGP+ EFELR DGA
Sbjct: 1087 GFKAVMIAESSGSLLAQFQLRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEEEFELRTDGA 1146

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK  ILEEAHNSAYAMHP STKMYRTLKKTY   GMKR+I EYVDR
Sbjct: 1147 IVKQGRLCVPNISELKGVILEEAHNSAYAMHPRSTKMYRTLKKTYWWPGMKRQIAEYVDR 1206

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK +RQR GGLLN LPVPEWKW+HITMDFLFGLPRTSRGYDGI +I DRLT
Sbjct: 1207 CLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFLFGLPRTSRGYDGIWVIADRLT 1263

[Close]

BLAST of Cmc07g0189671 vs. NCBI nr
Match: KAA0042035.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 262/297 (88.22%), Postives = 273/297 (91.92%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            M+EGKVIAYTSRQLKKHECNY T DLELAAVVL++KIWRHYLFGEKCHIF DHKSLKYIF
Sbjct: 967  MKEGKVIAYTSRQLKKHECNYLTLDLELAAVVLALKIWRHYLFGEKCHIFADHKSLKYIF 1026

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYH GKANVVAD LSRKSRL KSALCGIRASLLSELR
Sbjct: 1027 DQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSRLPKSALCGIRASLLSELR 1086

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            GFKAVM AESS SLLAQFQ+RS LVAEIVGRQPEDSNLQKMLAKAKQGP+ EFELR DGA
Sbjct: 1087 GFKAVMIAESSGSLLAQFQLRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEEEFELRTDGA 1146

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK  ILEEAHNSAYAMHP STKMYRTLKKTY   GMKR+I EYVDR
Sbjct: 1147 IVKQGRLCVPNISELKGVILEEAHNSAYAMHPRSTKMYRTLKKTYWWPGMKRQIAEYVDR 1206

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK +RQR GGLLN LPVPEWKW+HITMDFLFGLPRTSRGYDGI +I DRLT
Sbjct: 1207 CLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFLFGLPRTSRGYDGIWVIADRLT 1263

[Close]

BLAST of Cmc07g0189671 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1   MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
           MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 523 MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 582

Query: 61  DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
           DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 583 DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 642

Query: 121 GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
           G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 643 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 702

Query: 181 IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
           IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 703 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 762

Query: 241 CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
           CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 763 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 819

[Close]

BLAST of Cmc07g0189671 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1   MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
           MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 630 MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 689

Query: 61  DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
           DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 690 DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 749

Query: 121 GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
           G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 750 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 809

Query: 181 IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
           IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 810 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 869

Query: 241 CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
           CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 870 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 926

[Close]

BLAST of Cmc07g0189671 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 516.2 bits (1328), Expect = 1.9e-142
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 969  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 1028

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 1029 DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 1088

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 1089 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 1148

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 1149 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 1208

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 1209 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 1265

[Close]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 82/295 (27.80%), Postives = 144/295 (48.81%), Query Frame = 0


Query: 7    IAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFG--EKCHIFTDHKSL--KYIFDQ 66
            + Y S ++ K + NY   D E+ A++ S+K WRHYL    E   I TDH++L  +   + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   KELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGF 126
            +  N R  RW   ++D++  I Y PG AN +AD LSR               ++ E    
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR---------------IVDETEPI 854

Query: 127  KAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIV 186
                + ++S + + Q  +      ++V     D+ L  +L    +  +   +L+    I 
Sbjct: 855  PK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLIN 914

Query: 187  KQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCL 246
             + ++ +PN T+L   I+++ H     +HPG   +   + + +   G++++I EYV  C 
Sbjct: 915  SKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCH 974

Query: 247  ICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
             CQ  K    +  G L P+P  E  WE ++MDF+  LP +S GY+ + ++VDR +
Sbjct: 975  TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFS 1012

[Close]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 82/295 (27.80%), Postives = 144/295 (48.81%), Query Frame = 0


Query: 7    IAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFG--EKCHIFTDHKSL--KYIFDQ 66
            + Y S ++ K + NY   D E+ A++ S+K WRHYL    E   I TDH++L  +   + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   KELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGF 126
            +  N R  RW   ++D++  I Y PG AN +AD LSR               ++ E    
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR---------------IVDETEPI 854

Query: 127  KAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIV 186
                + ++S + + Q  +      ++V     D+ L  +L    +  +   +L+    I 
Sbjct: 855  PK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLIN 914

Query: 187  KQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCL 246
             + ++ +PN T+L   I+++ H     +HPG   +   + + +   G++++I EYV  C 
Sbjct: 915  SKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCH 974

Query: 247  ICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
             CQ  K    +  G L P+P  E  WE ++MDF+  LP +S GY+ + ++VDR +
Sbjct: 975  TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFS 1012

[Close]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 82/295 (27.80%), Postives = 144/295 (48.81%), Query Frame = 0


Query: 7    IAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFG--EKCHIFTDHKSL--KYIFDQ 66
            + Y S ++ K + NY   D E+ A++ S+K WRHYL    E   I TDH++L  +   + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   KELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGF 126
            +  N R  RW   ++D++  I Y PG AN +AD LSR               ++ E    
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR---------------IVDETEPI 854

Query: 127  KAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIV 186
                + ++S + + Q  +      ++V     D+ L  +L    +  +   +L+    I 
Sbjct: 855  PK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLIN 914

Query: 187  KQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCL 246
             + ++ +PN T+L   I+++ H     +HPG   +   + + +   G++++I EYV  C 
Sbjct: 915  SKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCH 974

Query: 247  ICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
             CQ  K    +  G L P+P  E  WE ++MDF+  LP +S GY+ + ++VDR +
Sbjct: 975  TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFS 1012

[Close]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 82/295 (27.80%), Postives = 144/295 (48.81%), Query Frame = 0


Query: 7    IAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFG--EKCHIFTDHKSL--KYIFDQ 66
            + Y S ++ K + NY   D E+ A++ S+K WRHYL    E   I TDH++L  +   + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   KELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGF 126
            +  N R  RW   ++D++  I Y PG AN +AD LSR               ++ E    
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR---------------IVDETEPI 854

Query: 127  KAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIV 186
                + ++S + + Q  +      ++V     D+ L  +L    +  +   +L+    I 
Sbjct: 855  PK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLIN 914

Query: 187  KQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCL 246
             + ++ +PN T+L   I+++ H     +HPG   +   + + +   G++++I EYV  C 
Sbjct: 915  SKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCH 974

Query: 247  ICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
             CQ  K    +  G L P+P  E  WE ++MDF+  LP +S GY+ + ++VDR +
Sbjct: 975  TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFS 1012

[Close]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.4e-31
Identity = 82/295 (27.80%), Postives = 144/295 (48.81%), Query Frame = 0


Query: 7    IAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFG--EKCHIFTDHKSL--KYIFDQ 66
            + Y S ++ K + NY   D E+ A++ S+K WRHYL    E   I TDH++L  +   + 
Sbjct: 735  VGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNES 794

Query: 67   KELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELRGF 126
            +  N R  RW   ++D++  I Y PG AN +AD LSR               ++ E    
Sbjct: 795  EPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR---------------IVDETEPI 854

Query: 127  KAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGAIV 186
                + ++S + + Q  +      ++V     D+ L  +L    +  +   +L+    I 
Sbjct: 855  PK-DSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLIN 914

Query: 187  KQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDRCL 246
             + ++ +PN T+L   I+++ H     +HPG   +   + + +   G++++I EYV  C 
Sbjct: 915  SKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCH 974

Query: 247  ICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
             CQ  K    +  G L P+P  E  WE ++MDF+  LP +S GY+ + ++VDR +
Sbjct: 975  TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFS 1012

[Close]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL
Match: A0A5D3D150 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002770 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 2.2e-147
Identity = 263/297 (88.55%), Postives = 274/297 (92.26%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            M+EGKVIAYTSRQLKKHECNYPT DLELAAVVL++KIWRHYLFGEKCHIF DHKSLKYIF
Sbjct: 967  MKEGKVIAYTSRQLKKHECNYPTLDLELAAVVLALKIWRHYLFGEKCHIFADHKSLKYIF 1026

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYH GKANVVAD LSRKSRL KSALCGIRASLLSELR
Sbjct: 1027 DQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSRLPKSALCGIRASLLSELR 1086

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            GFKAVM AESS SLLAQFQ+RS LVAEIVGRQPEDSNLQKMLAKAKQGP+ EFELR DGA
Sbjct: 1087 GFKAVMIAESSGSLLAQFQLRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEEEFELRTDGA 1146

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK  ILEEAHNSAYAMHP STKMYRTLKKTY   GMKR+I EYVDR
Sbjct: 1147 IVKQGRLCVPNISELKGVILEEAHNSAYAMHPRSTKMYRTLKKTYWWPGMKRQIAEYVDR 1206

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK +RQR GGLLN LPVPEWKW+HITMDFLFGLPRTSRGYDGI +I DRLT
Sbjct: 1207 CLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFLFGLPRTSRGYDGIWVIADRLT 1263

[Close]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL
Match: A0A5A7TKT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G004880 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 262/297 (88.22%), Postives = 273/297 (91.92%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            M+EGKVIAYTSRQLKKHECNY T DLELAAVVL++KIWRHYLFGEKCHIF DHKSLKYIF
Sbjct: 967  MKEGKVIAYTSRQLKKHECNYLTLDLELAAVVLALKIWRHYLFGEKCHIFADHKSLKYIF 1026

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYH GKANVVAD LSRKSRL KSALCGIRASLLSELR
Sbjct: 1027 DQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSRLPKSALCGIRASLLSELR 1086

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            GFKAVM AESS SLLAQFQ+RS LVAEIVGRQPEDSNLQKMLAKAKQGP+ EFELR DGA
Sbjct: 1087 GFKAVMIAESSGSLLAQFQLRSSLVAEIVGRQPEDSNLQKMLAKAKQGPEEEFELRTDGA 1146

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK  ILEEAHNSAYAMHP STKMYRTLKKTY   GMKR+I EYVDR
Sbjct: 1147 IVKQGRLCVPNISELKGVILEEAHNSAYAMHPRSTKMYRTLKKTYWWPGMKRQIAEYVDR 1206

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK +RQR GGLLN LPVPEWKW+HITMDFLFGLPRTSRGYDGI +I DRLT
Sbjct: 1207 CLICQQVKPMRQRPGGLLNLLPVPEWKWKHITMDFLFGLPRTSRGYDGIWVIADRLT 1263

[Close]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.4e-143
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 931  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 990

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 991  DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 1050

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 1051 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 1110

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 1111 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 1170

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 1171 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 1227

[Close]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.4e-143
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 969  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 1028

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 1029 DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 1088

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 1089 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 1148

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 1149 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 1208

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 1209 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 1265

[Close]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.4e-143
Identity = 252/297 (84.85%), Postives = 269/297 (90.57%), Query Frame = 0


Query: 1    MQEGKVIAYTSRQLKKHECNYPTHDLELAAVVLSVKIWRHYLFGEKCHIFTDHKSLKYIF 60
            MQ+G VIAY SRQLK+HECNYPTHDLELAAVVL++KIWRHYLFGEKCHIFTDHKSLKYIF
Sbjct: 969  MQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSLKYIF 1028

Query: 61   DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADELSRKSRLSKSALCGIRASLLSELR 120
            DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVAD LSRKSRL KSALCGIR +LL+ELR
Sbjct: 1029 DQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLNELR 1088

Query: 121  GFKAVMTAESSWSLLAQFQVRSPLVAEIVGRQPEDSNLQKMLAKAKQGPKVEFELRMDGA 180
            G KAV+T E S SLLAQFQVRS LV EIV RQ EDSNLQK   K+K+G +VEFELR DGA
Sbjct: 1089 GSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLEVEFELRTDGA 1148

Query: 181  IVKQGRLCIPNFTELKVAILEEAHNSAYAMHPGSTKMYRTLKKTYCCTGMKREIVEYVDR 240
            IVKQGRLC+PN +ELK AILEEAH+SAYAMHPGSTKMYRTLKKTY  +GMK+EI EYVDR
Sbjct: 1149 IVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTYWWSGMKQEIAEYVDR 1208

Query: 241  CLICQQVKRVRQRSGGLLNPLPVPEWKWEHITMDFLFGLPRTSRGYDGISIIVDRLT 298
            CLICQQVK VRQR GG LNPLPVPEWKWEHITMDFLFGLPRTS G+DGI +IVDRLT
Sbjct: 1209 CLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSGHDGIWVIVDRLT 1265

The following BLAST results are available for this feature:

BLAST of Cmc07g0189671 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17971.1	4.5e-147	88.55	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0042035.1	6.4e-146	88.22	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050493.1	1.9e-142	84.85	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050527.1	1.9e-142	84.85	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	1.9e-142	84.85	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0189671 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.4e-31	27.80	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.4e-31	27.80	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.4e-31	27.80	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.4e-31	27.80	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.4e-31	27.80	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D150	2.2e-147	88.55	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A5A7TKT0	3.1e-146	88.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67...	[more]
A0A5A7U2V7	9.4e-143	84.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	9.4e-143	84.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	9.4e-143	84.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]

BLAST of Cmc07g0189671 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 2..50 e-value: 1.5E-5 score: 26.9
None	No IPR available	GENE3D	1.10.340.70		coord: 157..248 e-value: 1.4E-14 score: 56.1
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..245
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 1..245
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..100 e-value: 1.06504E-49 score: 158.81
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 194..249 e-value: 1.0E-14 score: 54.3
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 4..79 e-value: 2.0E-24 score: 85.9
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189671.1	Cmc07g0189671.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding