Cmc07g0189591 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189591
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Pol protein
Location	CMiso1.1chr07: 8330488 .. 8330961 (-)
RNA-Seq Expression	Cmc07g0189591
Synteny	Cmc07g0189591

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTCATTACGGGGCTGCCTAGAACTCTGAGGGGTTTTACAGTGATTTGGGTCATGGTTGACAGGCTTACCAAATCAGCACACTTCATTCCGGGCAAATCCACGTATACTACTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTTCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGGTTTGCAGGCTGCTATGGGCATGAGGTTAGACTTTAGTACAACTTTCCATCCACAGACTGACGGTCAGACTAAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCTTGTGCATTAGAATTTCCGGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTCGCTTATAATAACAGTTTTCAGGCTACCATTGGCATGGAACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTGTACTGA

mRNA sequence

ATGGATTTCATTACGGGGCTGCCTAGAACTCTGAGGGGTTTTACAGTGATTTGGGTCATGGTTGACAGGCTTACCAAATCAGCACACTTCATTCCGGGCAAATCCACGTATACTACTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTTCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGGTTTGCAGGCTGCTATGGGCATGAGGTTAGACTTTAGTACAACTTTCCATCCACAGACTGACGGTCAGACTAAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCTTGTGCATTAGAATTTCCGGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTCGCTTATAATAACAGTTTTCAGGCTACCATTGGCATGGAACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTGTACTGA

Coding sequence (CDS)

ATGGATTTCATTACGGGGCTGCCTAGAACTCTGAGGGGTTTTACAGTGATTTGGGTCATGGTTGACAGGCTTACCAAATCAGCACACTTCATTCCGGGCAAATCCACGTATACTACTAGTAAGTGGGCACAGTTGTACATGTCTGAGATAGTGAGACTTCATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTTGAAGGGTTTGCAGGCTGCTATGGGCATGAGGTTAGACTTTAGTACAACTTTCCATCCACAGACTGACGGTCAGACTAAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCTTGTGCATTAGAATTTCCGGGTAGTTGGGACTCCCACTTGCATTTGATGGAATTCGCTTATAATAACAGTTTTCAGGCTACCATTGGCATGGAACCATTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCTGTGTACTGA

Protein sequence

MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPVY

Homology

[Close]

BLAST of Cmc07g0189591 vs. NCBI nr
Match: KAA0045277.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYTTSKWAQLYMSEIVRLHGVPVSI
Sbjct: 583 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 642

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFT KFLKGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 643 VSDRDARFTFKFLKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 702

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNSFQATIGM PFEALYGKCCRSPV
Sbjct: 703 DSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPV 738

[Close]

BLAST of Cmc07g0189591 vs. NCBI nr
Match: KAA0040699.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 3.8e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 1255 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1314

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
            VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 1315 VSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1374

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
            DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 1375 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 1410

[Close]

BLAST of Cmc07g0189591 vs. NCBI nr
Match: KAA0041424.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 3.8e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 156

[Close]

BLAST of Cmc07g0189591 vs. NCBI nr
Match: KAA0047043.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 3.8e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 206 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 361

[Close]

BLAST of Cmc07g0189591 vs. NCBI nr
Match: KAA0025425.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 311.6 bits (797), Expect = 3.8e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 141 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 200

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 201 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 260

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 261 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 296

[Close]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 61/155 (39.35%), Postives = 85/155 (54.84%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDF+TGLP T     +I V+VDR +K AHFI  + T   ++   L    I   HG P +I
Sbjct: 1174 MDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTI 1233

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
             SDRD R T+   + L   +G++   S+  HPQTDGQ++R  Q L  +LRA A     +W
Sbjct: 1234 TSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYASTNIQNW 1293

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSP 156
              +L  +EF YN++   T+G  PFE   G    +P
Sbjct: 1294 HVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP 1328

[Close]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 9.0e-25
Identity = 60/155 (38.71%), Postives = 84/155 (54.19%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDF+TGLP T     +I V+VDR +K AHFI  + T   ++   L    I   HG P +I
Sbjct: 1200 MDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTI 1259

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
             SDRD R T+   + L   +G++   S+  HPQTDGQ++R  Q L  +LRA       +W
Sbjct: 1260 TSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYVSTNIQNW 1319

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSP 156
              +L  +EF YN++   T+G  PFE   G    +P
Sbjct: 1320 HVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTP 1354

[Close]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++V+VDR +K A  +P   + T  + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+  K         + FS  + PQTDGQT+R NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALY 149
              H+ L++ +YNN+  +   M PFE ++
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++V+VDR +K A  +P   + T  + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+  K         + FS  + PQTDGQT+R NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALY 149
              H+ L++ +YNN+  +   M PFE ++
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 52/148 (35.14%), Postives = 83/148 (56.08%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDFIT LP +  G+  ++V+VDR +K A  +P   + T  + A+++   ++   G P  I
Sbjct: 989  MDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEI 1048

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
            ++D D  FTS+  K         + FS  + PQTDGQT+R NQ +E +LR      P +W
Sbjct: 1049 IADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTW 1108

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALY 149
              H+ L++ +YNN+  +   M PFE ++
Sbjct: 1109 VDHISLVQQSYNNAIHSATQMTPFEIVH 1135

[Close]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL
Match: A0A5A7TTW5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00290 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 148/156 (94.87%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYTTSKWAQLYMSEIVRLHGVPVSI
Sbjct: 583 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 642

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFT KFLKGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 643 VSDRDARFTFKFLKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 702

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNSFQATIGM PFEALYGKCCRSPV
Sbjct: 703 DSHLHLMEFAYNNSFQATIGMAPFEALYGKCCRSPV 738

[Close]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL
Match: A0A5A7THF3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold529G00140 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1    MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
            MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 1255 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 1314

Query: 61   VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
            VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 1315 VSDRDARFTSKFWKGLQTAMGSRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 1374

Query: 121  DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
            DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 1375 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 1410

[Close]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL
Match: A0A5A7SLT0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 141 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 200

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 201 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 260

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 261 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 296

[Close]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL
Match: A0A5A7TU00 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 206 MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 265

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 266 VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 325

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 326 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 361

[Close]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL
Match: A0A5A7TDB5 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 146/156 (93.59%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDFITGLPRTLRGFTVIWVMVDRLTKSAHFIPGKSTYTTSKWAQLYMSEIVRLHGVPVSI 60
           MDFITGLPRTLRGFTVIWV+VDRLTKSAHF+PGKSTYT SKWAQLYMSEIVRLHGVPVSI
Sbjct: 1   MDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSI 60

Query: 61  VSDRDARFTSKFLKGLQAAMGMRLDFSTTFHPQTDGQTKRLNQVLEDMLRACALEFPGSW 120
           VSDRDARFTSKF KGLQ AMG RLDFST FHPQTDGQT+RLNQVLEDMLRACALEFPGSW
Sbjct: 61  VSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPGSW 120

Query: 121 DSHLHLMEFAYNNSFQATIGMEPFEALYGKCCRSPV 157
           DSHLHLMEFAYNNS+QATIGM PFEALYGKCCRSPV
Sbjct: 121 DSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPV 156

The following BLAST results are available for this feature:

BLAST of Cmc07g0189591 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045277.1	4.5e-82	94.87	pol protein [Cucumis melo var. makuwa]	[more]
KAA0040699.1	3.8e-81	93.59	pol protein [Cucumis melo var. makuwa]	[more]
KAA0041424.1	3.8e-81	93.59	pol protein [Cucumis melo var. makuwa]	[more]
KAA0047043.1	3.8e-81	93.59	pol protein [Cucumis melo var. makuwa]	[more]
KAA0025425.1	3.8e-81	93.59	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0189591 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.1e-25	39.35	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	9.0e-25	38.71	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.0e-23	35.14	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.0e-23	35.14	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.0e-23	35.14	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TTW5	2.2e-82	94.87	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00290 PE...	[more]
A0A5A7THF3	1.9e-81	93.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold52...	[more]
A0A5A7SLT0	1.9e-81	93.59	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00090 PE...	[more]
A0A5A7TU00	1.9e-81	93.59	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold829G00280 PE...	[more]
A0A5A7TDB5	1.9e-81	93.59	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41502G00010 ...	[more]

BLAST of Cmc07g0189591 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..157 e-value: 4.2E-41 score: 142.4
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 1..145
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..151 score: 17.538958
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189591.1	Cmc07g0189591.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding