Cmc07g0189391 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189391
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr07: 8138148 .. 8139167 (-)
RNA-Seq Expression	Cmc07g0189391
Synteny	Cmc07g0189391

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACATAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTTCTCATGATCTAGTAAATAATTTCATTAATATTATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCACAAGAAAAGTATGCTAGGAATATGGTCAAAAAGTTTGGTTTGGAACAGACTCGAAATAAGCGAACTCCAGCTGCGACACATGTTAAACTTACAAAAGATACTGAAGGTGCTGAAGTTGATCACAAATTCTACAGGAGTATAGTAGGCAGCCTATTTTACTTAACAGCAAGTCGACTTGACATAGCTTATGCTGTGGGAATATGTGCTCGTTATCAGGCAGATCCCCGCATCACTCACCTAGAAGCTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGATACCACTCCCACTCTAGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGGAGGTTGCTTCTTTTTAGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTATTTCTTTATCTACAGCTGAAGCTGAATATATAGCTGCAAGTAGTGGTTGTACACAATTGTTTTGGATGAAAAACATGCTGCTTGAATATGGCTTCGATCAGGACATTATGACGTTGTATTGTGACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAACATAGTCGAACTAAGCATATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACAAAGTAATCAAGCTTGATCATATTCGTTCAAATTTACAATTAGCCGATATCTTCACTAAAAACCCCTGGATGCTAGCTCATTCGAATACTTACGTGCTGGTTTAG

mRNA sequence

ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACATAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTTCTCATGATCTAGTAAATAATTTCATTAATATTATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCACAAGAAAAGTATGCTAGGAATATGGTCAAAAAGTTTGGTTTGGAACAGACTCGAAATAAGCGAACTCCAGCTGCGACACATGTTAAACTTACAAAAGATACTGAAGGTGCTGAAGTTGATCACAAATTCTACAGGAGTATAGTAGGCAGCCTATTTTACTTAACAGCAAGTCGACTTGACATAGCTTATGCTGTGGGAATATGTGCTCGTTATCAGGCAGATCCCCGCATCACTCACCTAGAAGCTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGATACCACTCCCACTCTAGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGGAGGTTGCTTCTTTTTAGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTATTTCTTTATCTACAGCTGAAGCTGAATATATAGCTGCAAGTAGTGGTTGTACACAATTGTTTTGGATGAAAAACATGCTGCTTGAATATGGCTTCGATCAGGACATTATGACGTTGTATTGTGACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAACATAGTCGAACTAAGCATATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACAAAGTAATCAAGCTTGATCATATTCGTTCAAATTTACAATTAGCCGATATCTTCACTAAAAACCCCTGGATGCTAGCTCATTCGAATACTTACGTGCTGGTTTAG

Coding sequence (CDS)

ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACATAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTTCTCATGATCTAGTAAATAATTTCATTAATATTATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCACAAGAAAAGTATGCTAGGAATATGGTCAAAAAGTTTGGTTTGGAACAGACTCGAAATAAGCGAACTCCAGCTGCGACACATGTTAAACTTACAAAAGATACTGAAGGTGCTGAAGTTGATCACAAATTCTACAGGAGTATAGTAGGCAGCCTATTTTACTTAACAGCAAGTCGACTTGACATAGCTTATGCTGTGGGAATATGTGCTCGTTATCAGGCAGATCCCCGCATCACTCACCTAGAAGCTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTTCTATGATACCACTCCCACTCTAGTTGGATATTGTGATGCTGACTGGACAGGTTCAGCTGATGATCGTAAAAGTACGTCTGGAGGTTGCTTCTTTTTAGGAAACAATTTAATCTCTTGGTTAAGTAAGAAGCAAAACTGTATTTCTTTATCTACAGCTGAAGCTGAATATATAGCTGCAAGTAGTGGTTGTACACAATTGTTTTGGATGAAAAACATGCTGCTTGAATATGGCTTCGATCAGGACATTATGACGTTGTATTGTGACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAACATAGTCGAACTAAGCATATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACAAAGTAATCAAGCTTGATCATATTCGTTCAAATTTACAATTAGCCGATATCTTCACTAAAAACCCCTGGATGCTAGCTCATTCGAATACTTACGTGCTGGTTTAG

Protein sequence

MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAEVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGMMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYIAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLADIFTKNPWMLAHSNTYVLV

Homology

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BLAST of Cmc07g0189391 vs. NCBI nr
Match: TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 605.1 bits (1559), Expect = 3.6e-169
Identity = 297/339 (87.61%), Postives = 312/339 (92.04%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGF HDLVNNFINIMQSEFEMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLG QIKQKNDDI ISQ+KYA+NM KKFGLEQ RNKRTPAATHVKLT+D +GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSIV +L YLTASR DIAYAVGICARYQADPRI+HLEAVKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTPTLVGYCDADW G ADDRKSTSGGCFFLGNNLI WLSKKQNC+SLST EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           I A SGCTQL WM+N+L EYGFDQ  +TLY DNMSAIDISKNPVQHSR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTKNPWMLAHSNTYVLV 340
           ELVEDKVI+LDHIRSNLQLADIFT N WM  HSNTYVLV
Sbjct: 356 ELVEDKVIRLDHIRSNLQLADIFT-NLWMRTHSNTYVLV 393

[Close]

BLAST of Cmc07g0189391 vs. NCBI nr
Match: KAA0066740.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 512.3 bits (1318), Expect = 3.2e-141
Identity = 261/325 (80.31%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGF  DLVNNFINIMQSEFEMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGEL CFLGLQI+QKNDDIFISQ+KYARN+VKKFGLEQ RNKRTPA THVKLTKD EGA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSIVGSL YLTASR DIAYA+GI ARYQ  PRITHLEA+KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTPTLVGYCDADW GS DDRK                             EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----------------------------IEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL WMKN+L EYGFDQD MTLYC+NMSAIDISKN VQHSRTKHIDIRHHFIR
Sbjct: 296 IAAGSGCTQLIWMKNVLHEYGFDQDTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIR 352

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTK 326
           E VE+KVIKLDHIRSNLQLA+IFTK
Sbjct: 356 EPVEEKVIKLDHIRSNLQLANIFTK 352

[Close]

BLAST of Cmc07g0189391 vs. NCBI nr
Match: KAA0066405.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 499.6 bits (1285), Expect = 2.1e-137
Identity = 255/316 (80.70%), Postives = 264/316 (83.54%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGF  DLVNNFINIMQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLGLQIKQ NDDIFISQEKY RNMVKKFGLEQ RNKRTPA THVKLTKDTE A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSI+GSL YLTASR DIAY VGICARYQ DP ITHL AVK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTT TLVGYCDADW GSADDRK+T                        S  EAEY
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNT------------------------SEVEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL W KNMLLEYGFDQD MTLYCDNMSAIDIS NPVQHSRT+HIDIRHHFI 
Sbjct: 296 IAAGSGCTQLIWTKNMLLEYGFDQDTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIP 346

Query: 301 ELVEDKVIKLDHIRSN 317
           ELV+DKVIKLDHI SN
Sbjct: 356 ELVKDKVIKLDHICSN 346

[Close]

BLAST of Cmc07g0189391 vs. NCBI nr
Match: KAA0055610.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 486.1 bits (1250), Expect = 2.4e-133
Identity = 240/265 (90.57%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLGLQIK+KND IFISQEKYA+NMVKKFGLEQ RNKRTP ATHVKLTKDTE  
Sbjct: 1   MVGELSCFLGLQIKRKNDGIFISQEKYAKNMVKKFGLEQARNKRTPTATHVKLTKDTEDV 60

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           E DHK YRSIVGSL YLTASR +IAY VGICA YQADPRITHLEAVKRILKYVHGTSDFG
Sbjct: 61  E-DHKLYRSIVGSLLYLTASRPNIAYVVGICAHYQADPRITHLEAVKRILKYVHGTSDFG 120

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTP LVGYCDADW GSADDRKSTSGGCFFLGNNLISWLSKKQNC+SLST EAEY
Sbjct: 121 MMYSYDTTPFLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTTEAEY 180

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL WMKNML EYGFDQD MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFIR
Sbjct: 181 IAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTSAIDISKNPVQHSRTKHIDIRHHFIR 240

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTK 326
           ELVEDKVIKLDHIRSNLQL DIFTK
Sbjct: 241 ELVEDKVIKLDHIRSNLQLVDIFTK 264

[Close]

BLAST of Cmc07g0189391 vs. NCBI nr
Match: AAO73521.1 (gag-pol polyprotein [Glycine max])

HSP 1 Score: 478.8 bits (1231), Expect = 3.9e-131
Identity = 224/324 (69.14%), Postives = 274/324 (84.57%), Query Frame = 0


Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSM 61
            +L  +GY +G IDKTLF+ + ++ L++AQIYVDDI+FGG S++++ +F+  MQSEFEMS+
Sbjct: 1229 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1288

Query: 62   VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAE 121
            VGEL+ FLGLQ+KQ  D IF+SQ +YA+N+VKKFG+E   +KRTPA TH+KL+KD  G  
Sbjct: 1289 VGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTS 1348

Query: 122  VDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGM 181
            VD   YRS++GSL YLTASR DI YAVG+CARYQA+P+I+HL  VKRILKYV+GTSD+G+
Sbjct: 1349 VDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGI 1408

Query: 182  MYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYI 241
            MY + + P LVGYCDADW GSADDRKSTSGGCF+LGNNLISW SKKQNC+SLSTAEAEYI
Sbjct: 1409 MYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYI 1468

Query: 242  AASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE 301
            AA S C+QL WMK ML EY  +QD+MTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+
Sbjct: 1469 AAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRD 1528

Query: 302  LVEDKVIKLDHIRSNLQLADIFTK 326
            LV+DKVI L H+ +  Q+ADIFTK
Sbjct: 1529 LVDDKVITLKHVDTEEQIADIFTK 1552

[Close]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.3e-57
Identity = 126/334 (37.72%), Postives = 197/334 (58.98%), Query Frame = 0


Query: 2    YLRGRGYSRGEIDKTLFIHRKSD-QLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 61
            +++ + Y +   D  ++  R S+   ++  +YVDD++  G    L+      +   F+M 
Sbjct: 977  FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036

Query: 62   MVGELSCFLGLQI--KQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTE 121
             +G     LG++I  ++ +  +++SQEKY   ++++F ++  +   TP A H+KL+K   
Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096

Query: 122  GAEVDHKF------YRSIVGSLFY-LTASRLDIAYAVGICARYQADPRITHLEAVKRILK 181
               V+ K       Y S VGSL Y +  +R DIA+AVG+ +R+  +P   H EAVK IL+
Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1156

Query: 182  YVHGTSDFGMMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCI 241
            Y+ GT+    + F  + P L GY DAD  G  D+RKS++G  F      ISW SK Q C+
Sbjct: 1157 YLRGTTG-DCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1216

Query: 242  SLSTAEAEYIAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKH 301
            +LST EAEYIAA+    ++ W+K  L E G  Q    +YCD+ SAID+SKN + H+RTKH
Sbjct: 1217 ALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKH 1276

Query: 302  IDIRHHFIRELVEDKVIKLDHIRSNLQLADIFTK 326
            ID+R+H+IRE+V+D+ +K+  I +N   AD+ TK
Sbjct: 1277 IDVRYHWIREMVDDESLKVLKISTNENPADMLTK 1309

[Close]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 5.4e-51
Identity = 116/334 (34.73%), Postives = 183/334 (54.79%), Query Frame = 0


Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSM 61
            YL   G+     D +LF+ ++   ++   +YVDDI+  G    L+ + ++ +   F +  
Sbjct: 1103 YLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKE 1162

Query: 62   VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAE 121
              +L  FLG++ K+    + +SQ +Y  +++ +  +   +   TP AT  KLT  +    
Sbjct: 1163 HEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1222

Query: 122  VDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGM 181
             D   YR IVGSL YL  +R D++YAV   ++Y   P   H  A+KR+L+Y+ GT D G+
Sbjct: 1223 PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGI 1282

Query: 182  MYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYI 241
                  T +L  Y DADW G  DD  ST+G   +LG++ ISW SKKQ  +  S+ EAEY 
Sbjct: 1283 FLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1342

Query: 242  AASSGCTQLFWMKNMLLEYGFD-QDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 301
            + ++  ++L W+ ++L E G        +YCDN+ A  +  NPV HSR KHI + +HFIR
Sbjct: 1343 SVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIR 1402

Query: 302  ELVEDKVIKLDHIRSNLQLADIFTKNPWMLAHSN 335
              V+   +++ H+ ++ QLAD  TK    +A  N
Sbjct: 1403 NQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1436

[Close]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.6e-50
Identity = 115/325 (35.38%), Postives = 182/325 (56.00%), Query Frame = 0


Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSM 61
            YL   G+     D +LF+ ++   ++   +YVDDI+  G    L++N ++ +   F +  
Sbjct: 1120 YLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKD 1179

Query: 62   VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAE 121
              EL  FLG++ K+    + +SQ +Y  +++ +  +   +   TP A   KL+  +    
Sbjct: 1180 HEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKL 1239

Query: 122  VDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGM 181
             D   YR IVGSL YL  +R DI+YAV   +++   P   HL+A+KRIL+Y+ GT + G+
Sbjct: 1240 TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1299

Query: 182  MYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYI 241
                  T +L  Y DADW G  DD  ST+G   +LG++ ISW SKKQ  +  S+ EAEY 
Sbjct: 1300 FLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1359

Query: 242  AASSGCTQLFWMKNMLLEYGFD-QDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 301
            + ++  +++ W+ ++L E G        +YCDN+ A  +  NPV HSR KHI I +HFIR
Sbjct: 1360 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIR 1419

Query: 302  ELVEDKVIKLDHIRSNLQLADIFTK 326
              V+   +++ H+ ++ QLAD  TK
Sbjct: 1420 NQVQSGALRVVHVSTHDQLADTLTK 1444

[Close]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46
Identity = 108/326 (33.13%), Postives = 185/326 (56.75%), Query Frame = 0


Query: 8    YSRGEIDKTLFIHRKS--DQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSMVGEL 67
            +    +D+ ++I  K   ++ +   +YVDD++        +NNF   +  +F M+ + E+
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120

Query: 68   SCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAEVD-H 127
              F+G++I+ + D I++SQ  Y + ++ KF +E      TP  +  K+  +   ++ D +
Sbjct: 1121 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPS--KINYELLNSDEDCN 1180

Query: 128  KFYRSIVGSLFY-LTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGMMY 187
               RS++G L Y +  +R D+  AV I +RY +       + +KR+L+Y+ GT D  +++
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240

Query: 188  FYDTT--PTLVGYCDADWTGSADDRKSTSGGCFFLGN-NLISWLSKKQNCISLSTAEAEY 247
              +      ++GY D+DW GS  DRKST+G  F + + NLI W +K+QN ++ S+ EAEY
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1300

Query: 248  IAASSGCTQLFWMKNMLLEYGFD-QDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFI 307
            +A      +  W+K +L       ++ + +Y DN   I I+ NP  H R KHIDI++HF 
Sbjct: 1301 MALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFA 1360

Query: 308  RELVEDKVIKLDHIRSNLQLADIFTK 326
            RE V++ VI L++I +  QLADIFTK
Sbjct: 1361 REQVQNNVICLEYIPTENQLADIFTK 1384

[Close]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 3.8e-36
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 0


Query: 31  IYVDDIIFGGFSHDLVNNFINIMQSEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARN 90
           +YVDDI+  G S+ L+N  I  + S F M  +G +  FLG+QIK     +F+SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  MVKKFGLEQTRNKRTPAATHVKLTKDTEGAEV-DHKFYRSIVGSLFYLTASRLDIAYAVG 150
           ++   G+   +   TP    +KL      A+  D   +RSIVG+L YLT +R DI+YAV 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQADPRITHLEAVKRILKYVHGTSDFGMMYFYDTTPTLVGYCDADWTGSADDRKST 210
           I  +   +P +   + +KR+L+YV GT   G+    ++   +  +CD+DW G    R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 211 SGGCFFLGNNLISWLSKKQNCISLSTAEAEYIAASSGCTQLFW 253
           +G C FLG N+ISW +K+Q  +S S+ E EY A +    +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL
Match: A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 1.8e-169
Identity = 297/339 (87.61%), Postives = 312/339 (92.04%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGF HDLVNNFINIMQSEFEMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLG QIKQKNDDI ISQ+KYA+NM KKFGLEQ RNKRTPAATHVKLT+D +GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSIV +L YLTASR DIAYAVGICARYQADPRI+HLEAVKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTPTLVGYCDADW G ADDRKSTSGGCFFLGNNLI WLSKKQNC+SLST EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           I A SGCTQL WM+N+L EYGFDQ  +TLY DNMSAIDISKNPVQHSR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTKNPWMLAHSNTYVLV 340
           ELVEDKVI+LDHIRSNLQLADIFT N WM  HSNTYVLV
Sbjct: 356 ELVEDKVIRLDHIRSNLQLADIFT-NLWMRTHSNTYVLV 393

[Close]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL
Match: A0A5D3DWS6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00720 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 1.5e-141
Identity = 261/325 (80.31%), Postives = 273/325 (84.00%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGF  DLVNNFINIMQSEFEMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGEL CFLGLQI+QKNDDIFISQ+KYARN+VKKFGLEQ RNKRTPA THVKLTKD EGA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSIVGSL YLTASR DIAYA+GI ARYQ  PRITHLEA+KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTPTLVGYCDADW GS DDRK                             EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----------------------------IEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL WMKN+L EYGFDQD MTLYC+NMSAIDISKN VQHSRTKHIDIRHHFIR
Sbjct: 296 IAAGSGCTQLIWMKNVLHEYGFDQDTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIR 352

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTK 326
           E VE+KVIKLDHIRSNLQLA+IFTK
Sbjct: 356 EPVEEKVIKLDHIRSNLQLANIFTK 352

[Close]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL
Match: A0A5D3BPB5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00390 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 1.0e-137
Identity = 255/316 (80.70%), Postives = 264/316 (83.54%), Query Frame = 0


Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMS 60
           +YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGF  DLVNNFINIMQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115

Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLGLQIKQ NDDIFISQEKY RNMVKKFGLEQ RNKRTPA THVKLTKDTE A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           EVDHK YRSI+GSL YLTASR DIAY VGICARYQ DP ITHL AVK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTT TLVGYCDADW GSADDRK+T                        S  EAEY
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNT------------------------SEVEAEY 295

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL W KNMLLEYGFDQD MTLYCDNMSAIDIS NPVQHSRT+HIDIRHHFI 
Sbjct: 296 IAAGSGCTQLIWTKNMLLEYGFDQDTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIP 346

Query: 301 ELVEDKVIKLDHIRSN 317
           ELV+DKVIKLDHI SN
Sbjct: 356 ELVKDKVIKLDHICSN 346

[Close]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL
Match: A0A5D3DLL1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00150 PE=4 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 1.2e-133
Identity = 240/265 (90.57%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 61  MVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGA 120
           MVGELSCFLGLQIK+KND IFISQEKYA+NMVKKFGLEQ RNKRTP ATHVKLTKDTE  
Sbjct: 1   MVGELSCFLGLQIKRKNDGIFISQEKYAKNMVKKFGLEQARNKRTPTATHVKLTKDTEDV 60

Query: 121 EVDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFG 180
           E DHK YRSIVGSL YLTASR +IAY VGICA YQADPRITHLEAVKRILKYVHGTSDFG
Sbjct: 61  E-DHKLYRSIVGSLLYLTASRPNIAYVVGICAHYQADPRITHLEAVKRILKYVHGTSDFG 120

Query: 181 MMYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEY 240
           MMY YDTTP LVGYCDADW GSADDRKSTSGGCFFLGNNLISWLSKKQNC+SLST EAEY
Sbjct: 121 MMYSYDTTPFLVGYCDADWAGSADDRKSTSGGCFFLGNNLISWLSKKQNCVSLSTTEAEY 180

Query: 241 IAASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIR 300
           IAA SGCTQL WMKNML EYGFDQD MTLYCDN SAIDISKNPVQHSRTKHIDIRHHFIR
Sbjct: 181 IAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDNTSAIDISKNPVQHSRTKHIDIRHHFIR 240

Query: 301 ELVEDKVIKLDHIRSNLQLADIFTK 326
           ELVEDKVIKLDHIRSNLQL DIFTK
Sbjct: 241 ELVEDKVIKLDHIRSNLQLVDIFTK 264

[Close]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.9e-131
Identity = 224/324 (69.14%), Postives = 274/324 (84.57%), Query Frame = 0


Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSM 61
            +L  +GY +G IDKTLF+ + ++ L++AQIYVDDI+FGG S++++ +F+  MQSEFEMS+
Sbjct: 1229 FLTQQGYRKGGIDKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSL 1288

Query: 62   VGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAE 121
            VGEL+ FLGLQ+KQ  D IF+SQ +YA+N+VKKFG+E   +KRTPA TH+KL+KD  G  
Sbjct: 1289 VGELTYFLGLQVKQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTS 1348

Query: 122  VDHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGM 181
            VD   YRS++GSL YLTASR DI YAVG+CARYQA+P+I+HL  VKRILKYV+GTSD+G+
Sbjct: 1349 VDQSLYRSMIGSLLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGI 1408

Query: 182  MYFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYI 241
            MY + + P LVGYCDADW GSADDRKSTSGGCF+LGNNLISW SKKQNC+SLSTAEAEYI
Sbjct: 1409 MYCHCSNPMLVGYCDADWAGSADDRKSTSGGCFYLGNNLISWFSKKQNCVSLSTAEAEYI 1468

Query: 242  AASSGCTQLFWMKNMLLEYGFDQDIMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE 301
            AA S C+QL WMK ML EY  +QD+MTLYCDNMSAI+ISKNPVQHSRTKHIDIRHH+IR+
Sbjct: 1469 AAGSSCSQLVWMKQMLKEYNVEQDVMTLYCDNMSAINISKNPVQHSRTKHIDIRHHYIRD 1528

Query: 302  LVEDKVIKLDHIRSNLQLADIFTK 326
            LV+DKVI L H+ +  Q+ADIFTK
Sbjct: 1529 LVDDKVITLKHVDTEEQIADIFTK 1552

[Close]

BLAST of Cmc07g0189391 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-47
Identity = 111/300 (37.00%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 3   LRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFSHDLVNNFINIMQSEFEMSMV 62
           L G G+ +   D T F+   +   L   +YVDDII    +   V+   + ++S F++  +
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313

Query: 63  GELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQTRNKRTPAATHVKLTKDTEGAEV 122
           G L  FLGL+I +    I I Q KYA +++ + GL   +    P    V  +  + G  V
Sbjct: 314 GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373

Query: 123 DHKFYRSIVGSLFYLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGMM 182
           D K YR ++G L YL  +RLDI++AV   +++   PR+ H +AV +IL Y+ GT   G+ 
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433

Query: 183 YFYDTTPTLVGYCDADWTGSADDRKSTSGGCFFLGNNLISWLSKKQNCISLSTAEAEYIA 242
           Y       L  + DA +    D R+ST+G C FLG +LISW SKKQ  +S S+AEAEY A
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493

Query: 243 ASSGCTQLFWMKNMLLEYGFDQDIMT-LYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRE 302
            S    ++ W+     E        T L+CDN +AI I+ N V H RTKHI+   H +RE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc07g0189391 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-37
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 0


Query: 31  IYVDDIIFGGFSHDLVNNFINIMQSEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARN 90
           +YVDDI+  G S+ L+N  I  + S F M  +G +  FLG+QIK     +F+SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  MVKKFGLEQTRNKRTPAATHVKLTKDTEGAEV-DHKFYRSIVGSLFYLTASRLDIAYAVG 150
           ++   G+   +   TP    +KL      A+  D   +RSIVG+L YLT +R DI+YAV 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQADPRITHLEAVKRILKYVHGTSDFGMMYFYDTTPTLVGYCDADWTGSADDRKST 210
           I  +   +P +   + +KR+L+YV GT   G+    ++   +  +CD+DW G    R+ST
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRST 184

Query: 211 SGGCFFLGNNLISWLSKKQNCISLSTAEAEYIAASSGCTQLFW 253
           +G C FLG N+ISW +K+Q  +S S+ E EY A +    +L W
Sbjct: 185 TGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0189391 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-08
Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 136 YLTASRLDIAYAVGICARYQADPRITHLEAVKRILKYVHGTSDFGMMYFYDTTPTLVGYC 195
           YLT +R D+ +AV   +++ +  R   ++AV ++L YV GT   G+ Y   +   L  + 
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 196 DADWTGSADDRKSTSGGC-----FFLG 218
           D+DW    D R+S +G C     +FLG
Sbjct: 62  DSDWASCPDTRRSVTGFCSLVPLWFLG 88

The following BLAST results are available for this feature:

BLAST of Cmc07g0189391 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23188.1	3.6e-169	87.61	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0066740.1	3.2e-141	80.31	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [...	[more]
KAA0066405.1	2.1e-137	80.70	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [...	[more]
KAA0055610.1	2.4e-133	90.57	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [...	[more]
AAO73521.1	3.9e-131	69.14	gag-pol polyprotein [Glycine max]	[more]

BLAST of Cmc07g0189391 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.3e-57	37.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q9ZT94	5.4e-51	34.73	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.6e-50	35.38	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.1e-46	33.13	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	3.8e-36	38.12	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc07g0189391 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DI97	1.8e-169	87.61	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G...	[more]
A0A5D3DWS6	1.5e-141	80.31	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G...	[more]
A0A5D3BPB5	1.0e-137	80.70	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G...	[more]
A0A5D3DLL1	1.2e-133	90.57	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G...	[more]
Q84VI4	1.9e-131	69.14	Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1	[more]

BLAST of Cmc07g0189391 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.9e-47	37.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.7e-37	38.12	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.6e-08	33.33	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 4..107 e-value: 4.3E-16 score: 59.2
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 202..325
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 202..325
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 192..325 e-value: 1.01772E-79 score: 237.752
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 15..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189391.1	Cmc07g0189391.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding