Cmc07g0189061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0189061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 7706894 .. 7707241 (-)
RNA-Seq Expression	Cmc07g0189061
Synteny	Cmc07g0189061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTTGGTGATGAATGGAAAACTGCATTTAAGACTAAGCATGGATTGTATGAGTGGTTGGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATACGTCTCATTAATCATGTTTTGCATGAGTACATAGGAAAGTTTGTGGTTGTTTACTTTGATGATATTTTGATTTATTCCGAGTCTTTAAAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAAAAAAGTTCAGTTGTTTGCCAATATGAAAAAGTGTGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTATAAATGGTATTGAAGTTGATAATGTTAGTTAA

mRNA sequence

ATGAAAGTTGGTGATGAATGGAAAACTGCATTTAAGACTAAGCATGGATTGTATGAGTGGTTGGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATACGTCTCATTAATCATGTTTTGCATGAGTACATAGGAAAGTTTGTGGTTGTTTACTTTGATGATATTTTGATTTATTCCGAGTCTTTAAAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAAAAAAGTTCAGTTGTTTGCCAATATGAAAAAGTGTGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTATAAATGGTATTGAAGTTGATAATGTTAGTTAA

Coding sequence (CDS)

ATGAAAGTTGGTGATGAATGGAAAACTGCATTTAAGACTAAGCATGGATTGTATGAGTGGTTGGTTATGCCTTTTGGTCTTACCAATGCACCTAGTACATTTATACGTCTCATTAATCATGTTTTGCATGAGTACATAGGAAAGTTTGTGGTTGTTTACTTTGATGATATTTTGATTTATTCCGAGTCTTTAAAAATGCATGTGGAACATGTTAAACAGGTTTTGTGTGCTTTAAAAAAAGTTCAGTTGTTTGCCAATATGAAAAAGTGTGCATTTTGTCTAGATAAGATTAACTTTCTTGGGTTTGTTATTTCTATAAATGGTATTGAAGTTGATAATGTTAGTTAA

Protein sequence

MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIYSESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVDNVS

Homology

[Close]

BLAST of Cmc07g0189061 vs. NCBI nr
Match: XP_022158760.1 (uncharacterized protein LOC111025226 [Momordica charantia])

HSP 1 Score: 187.6 bits (475), Expect = 6.1e-44
Identity = 85/112 (75.89%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTF+RL+NHVL EY+GKFVVVYFDDIL+Y
Sbjct: 291 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 350

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S+SL  HVEHV+ VL  LKK  L+AN+KKC+FC++K+NFLGFV+S  G+EVD
Sbjct: 351 SKSLNEHVEHVRSVLNTLKKECLYANLKKCSFCMEKVNFLGFVVSSKGVEVD 402

[Close]

BLAST of Cmc07g0189061 vs. NCBI nr
Match: XP_038977799.1 (uncharacterized protein LOC120108282 [Phoenix dactylifera])

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 84/112 (75.00%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           MK GDEWKTAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL ++IGKFVVVYFDDILIY
Sbjct: 677 MKEGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRKFIGKFVVVYFDDILIY 736

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S++L  H+ H+K +L  L+K QL+AN+KKC FCLDK+ FLGFV+S  G+EVD
Sbjct: 737 SKNLHEHLGHLKNILFELRKEQLYANLKKCTFCLDKVVFLGFVVSTRGVEVD 788

[Close]

BLAST of Cmc07g0189061 vs. NCBI nr
Match: XP_023553652.1 (uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42
Identity = 81/112 (72.32%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTF+RL+NHVL EY+GKFVVVYFDDIL+Y
Sbjct: 776 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 835

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S+SL  H+ HV+ VL  L+   L+ N+KKC+FC++K+NFLGFV+S NG+EVD
Sbjct: 836 SKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVD 887

[Close]

BLAST of Cmc07g0189061 vs. NCBI nr
Match: XP_023521183.1 (uncharacterized protein LOC111784872 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 182.6 bits (462), Expect = 2.0e-42
Identity = 81/112 (72.32%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTF+RL+NHVL EY+GKFVVVYFDDIL+Y
Sbjct: 611 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 670

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S+SL  H+ HV+ VL  L+   L+ N+KKC+FC++K+NFLGFV+S NG+EVD
Sbjct: 671 SKSLDDHITHVRNVLTTLRNECLYVNLKKCSFCMEKVNFLGFVVSSNGVEVD 722

[Close]

BLAST of Cmc07g0189061 vs. NCBI nr
Match: XP_022135946.1 (uncharacterized protein LOC111007780 [Momordica charantia])

HSP 1 Score: 181.8 bits (460), Expect = 3.4e-42
Identity = 83/112 (74.11%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M VGDEW TAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL +++G+FVVVYFDDILIY
Sbjct: 286 MNVGDEWITAFKTKHGLYEWLVMPFGLTNAPSTFLRLMNHVLRDFLGEFVVVYFDDILIY 345

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S +L+ HV+HV+ VL AL+K +L+AN+KKC FC+++INFLGFVIS  G+EVD
Sbjct: 346 SRTLEDHVQHVRYVLIALRKEKLYANLKKCNFCMERINFLGFVISKQGVEVD 397

[Close]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.5e-21
Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           MK  D  KTAF T +G YE+L +PFGL NAP+ F R+I+ +L E+IGK   VY DDI+++
Sbjct: 228 MKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVF 287

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           SE    H ++++ VL +L K  L  N++K  F   ++ FLG++++ +GI+ D
Sbjct: 288 SEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKAD 339

[Close]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-19
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           ++ GDE K AF+   G++E+LVMP+G++ AP+ F   IN +L E     VV Y DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISING 109
           S+S   HV+HVK VL  LK   L  N  KC F   ++ F+G+ IS  G
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

[Close]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-19
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           ++ GDE K AF+   G++E+LVMP+G++ AP+ F   IN +L E     VV Y DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISING 109
           S+S   HV+HVK VL  LK   L  N  KC F   ++ F+G+ IS  G
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

[Close]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-19
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           ++ GDE K AF+   G++E+LVMP+G++ AP+ F   IN +L E     VV Y DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISING 109
           S+S   HV+HVK VL  LK   L  N  KC F   ++ F+G+ IS  G
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

[Close]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.2e-19
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           ++ GDE K AF+   G++E+LVMP+G++ AP+ F   IN +L E     VV Y DDILI+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIH 571

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISING 109
           S+S   HV+HVK VL  LK   L  N  KC F   ++ F+G+ IS  G
Sbjct: 572 SKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKG 619

[Close]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL
Match: A0A6J1DWQ2 (uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025226 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.0e-44
Identity = 85/112 (75.89%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M +GDEWKTAFKTK+GLYEWLVMPFGLTNAPSTF+RL+NHVL EY+GKFVVVYFDDIL+Y
Sbjct: 291 MHIGDEWKTAFKTKYGLYEWLVMPFGLTNAPSTFMRLMNHVLREYLGKFVVVYFDDILVY 350

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S+SL  HVEHV+ VL  LKK  L+AN+KKC+FC++K+NFLGFV+S  G+EVD
Sbjct: 351 SKSLNEHVEHVRSVLNTLKKECLYANLKKCSFCMEKVNFLGFVVSSKGVEVD 402

[Close]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL
Match: A0A6J1C253 (uncharacterized protein LOC111007780 OS=Momordica charantia OX=3673 GN=LOC111007780 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 83/112 (74.11%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M VGDEW TAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL +++G+FVVVYFDDILIY
Sbjct: 286 MNVGDEWITAFKTKHGLYEWLVMPFGLTNAPSTFLRLMNHVLRDFLGEFVVVYFDDILIY 345

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S +L+ HV+HV+ VL AL+K +L+AN+KKC FC+++INFLGFVIS  G+EVD
Sbjct: 346 SRTLEDHVQHVRYVLIALRKEKLYANLKKCNFCMERINFLGFVISKQGVEVD 397

[Close]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL
Match: A0A6J1DCS9 (uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019551 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.7e-42
Identity = 83/112 (74.11%), Postives = 100/112 (89.29%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           M V DEWKTAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL +++G+FVVVYFDDILIY
Sbjct: 172 MNVRDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRDFLGEFVVVYFDDILIY 231

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S +L+ HV+HV+ VL AL+K +L+AN+KKC FC++ INFLGFVIS  G+EVD
Sbjct: 232 SRTLEDHVQHVRYVLIALRKEKLYANLKKCNFCMEMINFLGFVISKQGVEVD 283

[Close]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL
Match: A0A6P8BUZ0 (Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116188779 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.2e-42
Identity = 82/112 (73.21%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           MK GDEWKTAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL  +IGKFVVVYFDDIL+Y
Sbjct: 441 MKEGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVYFDDILVY 500

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S+SLK H+ H++ VL AL+  +L+AN+KKC FC+D++ FLGFV+S  GI+VD
Sbjct: 501 SKSLKDHIHHLRCVLQALRHEELYANLKKCTFCMDRVVFLGFVVSSKGIQVD 552

[Close]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL
Match: A0A6P6XAP4 (uncharacterized protein LOC113741073 OS=Coffea arabica OX=13443 GN=LOC113741073 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.1e-41
Identity = 84/112 (75.00%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MKVGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFIRLINHVLHEYIGKFVVVYFDDILIY 60
           MK GDEWKTAFKTKHGLYEWLVMPFGLTNAPSTF+RL+NHVL  ++GKFVVVYFDDILIY
Sbjct: 579 MKEGDEWKTAFKTKHGLYEWLVMPFGLTNAPSTFMRLMNHVLRPFLGKFVVVYFDDILIY 638

Query: 61  SESLKMHVEHVKQVLCALKKVQLFANMKKCAFCLDKINFLGFVISINGIEVD 113
           S SL  HVEHVK VL  L++ +L+AN+KKC+FC D++ FLGFV+S  GI+VD
Sbjct: 639 SRSLDEHVEHVKLVLDVLRREKLYANLKKCSFCTDQLVFLGFVVSKQGIKVD 690

The following BLAST results are available for this feature:

BLAST of Cmc07g0189061 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158760.1	6.1e-44	75.89	uncharacterized protein LOC111025226 [Momordica charantia]	[more]
XP_038977799.1	1.2e-42	75.00	uncharacterized protein LOC120108282 [Phoenix dactylifera]	[more]
XP_023553652.1	2.0e-42	72.32	uncharacterized protein LOC111811140 [Cucurbita pepo subsp. pepo]	[more]
XP_023521183.1	2.0e-42	72.32	uncharacterized protein LOC111784872 [Cucurbita pepo subsp. pepo]	[more]
XP_022135946.1	3.4e-42	74.11	uncharacterized protein LOC111007780 [Momordica charantia]	[more]

BLAST of Cmc07g0189061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	7.5e-21	43.75	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P0CT41	9.2e-19	45.37	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.2e-19	45.37	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.2e-19	45.37	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	9.2e-19	45.37	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWQ2	3.0e-44	75.89	uncharacterized protein LOC111025226 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1C253	1.6e-42	74.11	uncharacterized protein LOC111007780 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1DCS9	4.7e-42	74.11	uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6P8BUZ0	6.2e-42	73.21	Reverse transcriptase OS=Punica granatum OX=22663 GN=LOC116188779 PE=4 SV=1	[more]
A0A6P6XAP4	1.1e-41	75.00	uncharacterized protein LOC113741073 OS=Coffea arabica OX=13443 GN=LOC113741073 ...	[more]

BLAST of Cmc07g0189061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 12..104 e-value: 3.0E-21 score: 76.0
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..104 score: 10.310547
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..104 e-value: 2.3E-38 score: 133.6
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 3..29 e-value: 2.3E-38 score: 133.6
None	No IPR available	PANTHER	PTHR47266	FAMILY NOT NAMED	coord: 9..112
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..104 e-value: 2.90619E-48 score: 150.438
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0189061.1	Cmc07g0189061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding