Cmc07g0188811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr07: 7294433 .. 7296364 (-)
RNA-Seq Expression	Cmc07g0188811
Synteny	Cmc07g0188811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATACAGTAGAGACTGCAGTTTATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCAACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGTGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTTATAAGAAAATCAACAAAGGAAAAGTAG

mRNA sequence

ATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATACAGTAGAGACTGCAGTTTATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCAACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGTGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTTATAAGAAAATCAACAAAGGAAAAGTAG

Coding sequence (CDS)

ATGTTTTTGGAAAACTTGTACATAGTTCCTAAAATTAAAAGGAACTTAGTTTCCGTTTCTTGTCTTATTGAACATATGTACTCAATTAATTTTTCTATGAATGAAGCGTTCATTTATAAGAATGGTGTACATATTTGTTCAGCTAAGCTTGAAAACAACTTGTATGTATTAAGACCTAATGAAGCAAAAGCAGTTTTAAATCATGAGATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATCGGATCGGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAAAAGATGTTTCATTACCTCCATGTGAATCTTGTCTTGAAGGTAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTTATACATTCAGACCTCTGTGGTCCGATGAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTCTAGGTATGGTTATTTATACTTAATGAAGCATAAGTCTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATCTGATCGAGGTGGAGAGTACATGGATTTGAGATTTCAGGACTATATGATAGAACATGGAATCCAATCCCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAGAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACGCTCAATTGCCTAGCTCGTTTTGGGGGTATACAGTAGAGACTGCAGTTTATATCTTGAACAATGTTCCCTCGAAGAGTGTTTCTGAAACACCTTTCGAGCTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCACACGTATTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTTGATCCACAAGAAAATAGAGTGTTTGTATCGACAAATGCTACTTTCTTGGAAGAAGACCACATGAGAAATCATAAACCACGAAGCAAATTAGTATTAAGTGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGGGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCACAACCTAACCGCTATTTGGGTTTAACTGAAACTCAAGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTGAAATGGAGTCTATGTACTTCAATTCAGTGTGGGAGCTTGTAGATCAACCTGAAGGGGTAAAACCTATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTTAAAGCTAGACTTGTGGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTCTCTCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTCCATCGCCACATTTTATGATTATGAAATATGGCAAATGGATGTCAAGACTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCCGAGGGGTTCATAACCCAAGGTCAAGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGTGTTGAAACAAGCATCAAGATCTTGGAACATTAGGTTTGATACTGCAATCAAATCCTATGGTTTTGACCAGAATGTTGATGAACCTTGTGTTATAAGAAAATCAACAAAGGAAAAGTAG

Protein sequence

MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRKSTKEK

Homology

[Close]

BLAST of Cmc07g0188811 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1286.2 bits (3327), Expect = 0.0e+00
Identity = 633/643 (98.44%), Postives = 636/643 (98.91%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN
Sbjct: 260 MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 319

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
           EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS
Sbjct: 320 EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 379

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Sbjct: 380 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 439

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           GYLYLM+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL
Sbjct: 440 GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 499

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGY VETAV+ILNNVPSKSVSETP
Sbjct: 500 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETP 559

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV
Sbjct: 560 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 619

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 420
           FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL
Sbjct: 620 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 679

Query: 421 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 480
           RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Sbjct: 680 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 739

Query: 481 YFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 540
           YFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP
Sbjct: 740 YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 799

Query: 541 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 600
           VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN
Sbjct: 800 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 859

Query: 601 RSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRKSTKEK 644
           RSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPCV +K  K K
Sbjct: 860 RSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK 902

[Close]

BLAST of Cmc07g0188811 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 624/643 (97.05%), Postives = 631/643 (98.13%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN
Sbjct: 260 MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 319

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
           EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVK+GLLNKLKDVS
Sbjct: 320 EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVS 379

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYFISFIDDYSRY
Sbjct: 380 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRY 439

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           GYLYLM+HKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQL
Sbjct: 440 GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQL 499

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGY VETAV+ILNNVPSKSVSETP
Sbjct: 500 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETP 559

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRV
Sbjct: 560 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRV 619

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 420
           FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL
Sbjct: 620 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 679

Query: 421 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 480
           RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Sbjct: 680 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 739

Query: 481 YFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 540
           YFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS 
Sbjct: 740 YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSS 799

Query: 541 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 600
           VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN
Sbjct: 800 VAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 859

Query: 601 RSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRKSTKEK 644
           RSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPCV +K  K K
Sbjct: 860 RSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK 902

[Close]

BLAST of Cmc07g0188811 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 538/549 (98.00%), Postives = 542/549 (98.72%), Query Frame = 0


Query: 95  RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 154
           +LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 155 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKIL 214
           LCGPMNVKARGGFEYFISFIDDYSRYGYLYLM+HKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 215 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 274
           RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 275 SFWGYTVETAVYILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 334
           SFWGY VETAV+ILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 335 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 394
           SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 395 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 454
           VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 455 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKV 514
           LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 515 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 574
           QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 575 LEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPC 634
           LEESIFMSQPEGFITQGQEQKVCKLNRSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 635 VIRKSTKEK 644
           V +K  K K
Sbjct: 768 VYKKINKGK 776

[Close]

BLAST of Cmc07g0188811 vs. NCBI nr
Match: TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1045.8 bits (2703), Expect = 1.5e-301
Identity = 514/522 (98.47%), Postives = 517/522 (99.04%), Query Frame = 0


Query: 95  RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 154
           +LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 155 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKIL 214
           LCGPMNVKARGGFEYFISFIDDYSRYGYLYLM+HKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 215 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 274
           RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 275 SFWGYTVETAVYILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 334
           SFWGY VETAV+ILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 335 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 394
           SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 395 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 454
           VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 455 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKV 514
           LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 515 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 574
           QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 575 LEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIR 617
           LEESIFMSQPE FITQGQEQKVCKLN SIY LKQASRSWNIR
Sbjct: 708 LEESIFMSQPERFITQGQEQKVCKLNLSIYGLKQASRSWNIR 749

[Close]

BLAST of Cmc07g0188811 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 1026.5 bits (2653), Expect = 9.5e-296
Identity = 497/639 (77.78%), Postives = 561/639 (87.79%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           + L+++  VP +KRNL+S++C++EH+Y+I+F +NE FI   G+ ICSA  ENNLY LRP 
Sbjct: 356 LILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPT 415

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
            A  VLN EMFRT  TQNK+Q++S  +N YLWHLRLGHINL+RI RLVK+G+LN+L+D S
Sbjct: 416 RANVVLNTEMFRTLETQNKKQKVS--SNAYLWHLRLGHINLNRIERLVKSGILNQLEDNS 475

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKR FTGKG RAK PLEL+HSDLCGPMNVKARGG+EYFISFIDD+SRY
Sbjct: 476 LPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRY 535

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           G++YL+ HKSE+ EKFKEYK EVEN + K IK LRSDRGGEYMD +FQDY+IE GIQSQL
Sbjct: 536 GHVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQL 595

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGY +ETA++ILNNVPSKSV ETP
Sbjct: 596 SAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETP 655

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           +ELW+GRK SL +FRIWGCPAHVLV NPKKLEPRS+LC FVGYPKE+RGGLF+ PQEN+V
Sbjct: 656 YELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKV 715

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSR-VDETTTSGQSHPSQS 420
           FVSTNATFLEEDH RNH+PRSK+VL E    +T   D+   S++ VD+   S QSH SQ 
Sbjct: 716 FVSTNATFLEEDHXRNHQPRSKIVLKEMFKNAT---DKPSSSTKVVDKANISDQSHTSQE 775

Query: 421 LRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMES 480
           LR+PRRSGRVV QPNRYLGL ETQ++IPDDGVEDPL+YKQAMNDVD+DQW+KAM+LEMES
Sbjct: 776 LRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMES 835

Query: 481 MYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 540
           MYFNSVW LVD P  VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFS
Sbjct: 836 MYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFS 895

Query: 541 PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 600
           PVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESI+M QPEGFI Q QEQKVCKL
Sbjct: 896 PVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKL 955

Query: 601 NRSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRK 639
            +SIY LKQASRSWNIRFDTAIKSYGF+QNVDEPCV +K
Sbjct: 956 QKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKK 989

[Close]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-115
Identity = 242/671 (36.07%), Postives = 374/671 (55.74%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           + L+++  VP ++ NL+S   L    Y   F+  +  + K  + I        LY     
Sbjct: 348 LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAE 407

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
             +  LN            +  IS +    LWH R+GH++   +  L K  L++  K  +
Sbjct: 408 ICQGELN----------AAQDEISVD----LWHKRMGHMSEKGLQILAKKSLISYAKGTT 467

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           + PC+ CL GK  +  F     R    L+L++SD+CGPM +++ GG +YF++FIDD SR 
Sbjct: 468 VKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRK 527

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
            ++Y++K K +  + F+++   VE    +K+K LRSD GGEY    F++Y   HGI+ + 
Sbjct: 528 LWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEK 587

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVS-ET 300
           + PGTPQ NGV+ER NRT+++ VRSM+  A+LP SFWG  V+TA Y++N  PS  ++ E 
Sbjct: 588 TVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEI 647

Query: 301 PFELWRGRKPSLSHFRIWGCP--AHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQE 360
           P  +W  ++ S SH +++GC   AHV      KL+ +S  C F+GY  E  G   +DP +
Sbjct: 648 PERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVK 707

Query: 361 NRVFVSTNATFLEEDHM----RNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQ 420
            +V  S +  F E +       + K ++ ++ +  T  ST   +     S  DE +  G+
Sbjct: 708 KKVIRSRDVVFRESEVRTAADMSEKVKNGIIPNFVTIPSTS-NNPTSAESTTDEVSEQGE 767

Query: 421 -------------------SHPSQSLRMP---RRSGRVVSQPNRYLGLTETQVVIPDDGV 480
                               HP+Q        RRS R   +  RY   +   V+I DD  
Sbjct: 768 QPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRY--PSTEYVLISDD-- 827

Query: 481 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSA 540
            +P S K+ ++  +K+Q +KAM  EMES+  N  ++LV+ P+G +P+ CKW++K K+D  
Sbjct: 828 REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGD 887

Query: 541 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 600
            K+  +KARLV KG+ Q++G+D++E FSPV  + SIR +LS+A   D E+ Q+DVKTAFL
Sbjct: 888 CKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 947

Query: 601 NGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIRFDTAIKSYGFDQNVD 643
           +G+LEE I+M QPEGF   G++  VCKLN+S+Y LKQA R W ++FD+ +KS  + +   
Sbjct: 948 HGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYS 999

[Close]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 310.1 bits (793), Expect = 6.0e-83
Identity = 217/748 (29.01%), Postives = 350/748 (46.79%), Query Frame = 0


Query: 3    LENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHIC-SAKLENNLYVLRPNE 62
            LE++    +   NL+SV  L E   SI F  +   I KNG+ +  ++ + NN+       
Sbjct: 345  LEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVKNSGMLNNV------- 404

Query: 63   AKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHIN------LDRIGRLVKNGLLNK 122
               V+N + + + N ++K       NN  LWH R GHI+      + R        LLN 
Sbjct: 405  --PVINFQAY-SINAKHK-------NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNN 464

Query: 123  LKDVSLPPCESCLEGKMTKRPFTGKGYRA--KEPLELIHSDLCGPMNVKARGGFEYFISF 182
            L ++S   CE CL GK  + PF     +   K PL ++HSD+CGP+         YF+ F
Sbjct: 465  L-ELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIF 524

Query: 183  IDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIE 242
            +D ++ Y   YL+K+KS+    F+++  + E   + K+  L  D G EY+    + + ++
Sbjct: 525  VDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVK 584

Query: 243  HGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPS 302
             GI   L+ P TPQ NGVSER  RT+ +  R+M+S A+L  SFWG  V TA Y++N +PS
Sbjct: 585  KGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPS 644

Query: 303  KSV---SETPFELWRGRKPSLSHFRIWGCPAHVLVTNPK-KLEPRSRLCQFVGYPKETRG 362
            +++   S+TP+E+W  +KP L H R++G   +V + N + K + +S    FVGY  E  G
Sbjct: 645  RALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNG 704

Query: 363  GLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDE---------STRVVDEVG 422
               +D    +  V+ +    E + + +   + + V  + + E         S +++    
Sbjct: 705  FKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEF 764

Query: 423  P--SSRVDETTTSGQSHPSQSLRMPRRSGRVV--------------------SQPNRYL- 482
            P  S   D       S  S++   P  S +++                     + N+Y  
Sbjct: 765  PNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFL 824

Query: 483  ------------------------GLTETQVVIPDDGVEDP------------------- 542
                                      +ET   + + G+++P                   
Sbjct: 825  NESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTK 884

Query: 543  --LSYKQ--------------AMNDV-----------DKDQWVKAMDLEMESMYFNSVWE 602
              +SY +                NDV           DK  W +A++ E+ +   N+ W 
Sbjct: 885  PQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWT 944

Query: 603  LVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSI 636
            +  +PE    +  +W++  K +  G    +KARLVA+G+TQ+  +DYEETF+PVA + S 
Sbjct: 945  ITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSF 1004

[Close]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.6e-75
Identity = 217/766 (28.33%), Postives = 348/766 (45.43%), Query Frame = 0


Query: 3    LENLYIVPKIKRNLVSVSCLIE-HMYSINFSMNEAFIYKN---GVHICSAKLENNLYVLR 62
            L  +  VP I +NL+SV  L   +  S+ F    +F  K+   GV +   K ++ LY   
Sbjct: 366  LNKVLYVPNIHKNLISVYRLCNTNRVSVEF-FPASFQVKDLNTGVPLLQGKTKDELYEWP 425

Query: 63   PNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLK- 122
               ++AV    MF  A+  +K    S       WH RLGH +L  +  ++ N  L  L  
Sbjct: 426  IASSQAV---SMF--ASPCSKATHSS-------WHSRLGHPSLAILNSVISNHSLPVLNP 485

Query: 123  DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDY 182
               L  C  C   K  K PF+     + +PLE I+SD+     + +   + Y++ F+D +
Sbjct: 486  SHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHF 545

Query: 183  SRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQ 242
            +RY +LY +K KS+  + F  +K+ VEN    +I  L SD GGE++ LR  DY+ +HGI 
Sbjct: 546  TRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLR--DYLSQHGIS 605

Query: 243  SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVS 302
               S P TP+ NG+SER++R +++M  +++S+A +P ++W Y    AVY++N +P+  + 
Sbjct: 606  HFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQ 665

Query: 303  -ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLFFD 362
             ++PF+   G+ P+    +++GC  +  +   N  KLE +S+ C F+GY       L   
Sbjct: 666  LQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLH 725

Query: 363  PQENRVFVSTNATFLEE----------------------DHMRNHK--PRSKLVL----- 422
                R++ S +  F E                        +  +H   P + LVL     
Sbjct: 726  IPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPC 785

Query: 423  -------------SEATDESTRVVDEVGPSSRVDETTTSGQSHPSQS------------- 482
                         S +   +T+V     PSS +   ++S  + PS +             
Sbjct: 786  LGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQN 845

Query: 483  -------LRMPRRSGRVVSQPNRYLGLTETQVVIP------------------------- 542
                   L  P  +    + PN+   L ++ +  P                         
Sbjct: 846  SNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPL 905

Query: 543  ---------------------------DDGVEDP---LSY----------KQAMNDVDKD 602
                                        DG+  P    SY          + A+  +  D
Sbjct: 906  PPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDD 965

Query: 603  QWVKAMDLEMESMYFNSVWELV-DQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGY 633
            +W +AM  E+ +   N  W+LV   P  V  +GC+WI+ +K +S G +  +KARLVAKGY
Sbjct: 966  RWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGY 1025

[Close]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-74
Identity = 208/764 (27.23%), Postives = 324/764 (42.41%), Query Frame = 0


Query: 3    LENLYIVPKIKRNLVSVSCLIE------HMYSINFSMNEAFIYKNGVHICSAKLENNLYV 62
            L N+  VP I +NL+SV  L          +  +F + +      GV +   K ++ LY 
Sbjct: 387  LHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKD---LNTGVPLLQGKTKDELY- 446

Query: 63   LRPNEAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKL 122
                E     +  +   A+  +K    S       WH RLGH     +  ++ N  L+ L
Sbjct: 447  ----EWPIASSQPVSLFASPSSKATHSS-------WHARLGHPAPSILNSVISNYSLSVL 506

Query: 123  K-DVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFID 182
                    C  CL  K  K PF+     +  PLE I+SD+     + +   + Y++ F+D
Sbjct: 507  NPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVD 566

Query: 183  DYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHG 242
             ++RY +LY +K KS+  E F  +K  +EN    +I    SD GGE++ L   +Y  +HG
Sbjct: 567  HFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL--WEYFSQHG 626

Query: 243  IQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKS 302
            I    S P TP+ NG+SER++R +++   +++S+A +P ++W Y    AVY++N +P+  
Sbjct: 627  ISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPL 686

Query: 303  VS-ETPFELWRGRKPSLSHFRIWGCPAHVLVT--NPKKLEPRSRLCQFVGYPKETRGGLF 362
            +  E+PF+   G  P+    R++GC  +  +   N  KL+ +SR C F+GY       L 
Sbjct: 687  LQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLC 746

Query: 363  FDPQENRVFVSTNATFLEE-----------DHMRNHKPRSKLVLSEATDESTR------- 422
               Q +R+++S +  F E              ++  +  S  V S  T   TR       
Sbjct: 747  LHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAP 806

Query: 423  --------------------------------------------VVDEVGPSSRVDETTT 482
                                                           + GP      T T
Sbjct: 807  SCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQT 866

Query: 483  SGQSHPS-----------------QSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVED 542
              Q+H S                 QSL  P +S      P      + T    P   +  
Sbjct: 867  QTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHP 926

Query: 543  PLSYKQAMND--------------------------------------------VDKDQW 602
            P    Q +N+                                            +  ++W
Sbjct: 927  PPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERW 986

Query: 603  VKAMDLEMESMYFNSVWELVDQPEG-VKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQ 633
              AM  E+ +   N  W+LV  P   V  +GC+WI+ +K +S G +  +KARLVAKGY Q
Sbjct: 987  RNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQ 1046

[Close]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.4e-23
Identity = 97/382 (25.39%), Postives = 170/382 (44.50%), Query Frame = 0


Query: 10  PKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPNEAKAVLNHE 69
           P I  +L+S+S L     +  F+ N      +G  +       + Y L  ++   + +H 
Sbjct: 516 PNIAYDLLSLSELANQNITACFTRN-TLERSDGTVLAPIVKHGDFYWL--SKKYLIPSHI 575

Query: 70  MFRTANTQNKRQRISPNNNTY-LWHLRLGHINLDRIGRLVKNGLLNKLKD-------VSL 129
              T N  NK +  S N   Y L H  LGH N   I + +K   +  LK+        S 
Sbjct: 576 SKLTINNVNKSK--SVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNAST 635

Query: 130 PPCESCLEGKMTKRPFTGKGYRAK-----EPLELIHSDLCGPMNVKARGGFEYFISFIDD 189
             C  CL GK TK     KG R K     EP + +H+D+ GP++   +    YFISF D+
Sbjct: 636 YQCPDCLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDE 695

Query: 190 YSRYGYLYLMKHKSE--ALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEH 249
            +R+ ++Y +  + E   L  F      ++N  + ++ +++ DRG EY +     +    
Sbjct: 696 KTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNR 755

Query: 250 GIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSK 309
           GI +  +     + +GV+ER NRTLL+  R+++  + LP+  W   VE +  I N++ S 
Sbjct: 756 GITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSP 815

Query: 310 SVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNP-KKLEPRSRLCQFVGYPKETRGGLFF 369
              ++  +        ++    +G P  V   NP  K+ PR      +   + + G + +
Sbjct: 816 KNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIY 875

Query: 370 DPQENRVFVSTNATFLEEDHMR 376
            P   +   +TN   L+++  +
Sbjct: 876 LPSLKKTVDTTNYVILQDNQSK 891

[Close]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1286.2 bits (3327), Expect = 0.0e+00
Identity = 633/643 (98.44%), Postives = 636/643 (98.91%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN
Sbjct: 260 MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 319

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
           EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS
Sbjct: 320 EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 379

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY
Sbjct: 380 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 439

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           GYLYLM+HKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL
Sbjct: 440 GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 499

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGY VETAV+ILNNVPSKSVSETP
Sbjct: 500 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETP 559

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV
Sbjct: 560 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 619

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 420
           FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL
Sbjct: 620 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 679

Query: 421 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 480
           RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Sbjct: 680 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 739

Query: 481 YFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 540
           YFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP
Sbjct: 740 YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 799

Query: 541 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 600
           VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN
Sbjct: 800 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 859

Query: 601 RSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRKSTKEK 644
           RSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPCV +K  K K
Sbjct: 860 RSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK 902

[Close]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1267.7 bits (3279), Expect = 0.0e+00
Identity = 624/643 (97.05%), Postives = 631/643 (98.13%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN
Sbjct: 260 MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 319

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
           EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVK+GLLNKLKDVS
Sbjct: 320 EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVS 379

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARG FEYFISFIDDYSRY
Sbjct: 380 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRY 439

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           GYLYLM+HKSEALEKFKEYKTEVENLLSKKIKI RSDRGGEYMDL FQDYMIEHGIQSQL
Sbjct: 440 GYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQL 499

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGY VETAV+ILNNVPSKSVSETP
Sbjct: 500 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETP 559

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDP+ENRV
Sbjct: 560 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRV 619

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 420
           FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL
Sbjct: 620 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSL 679

Query: 421 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 480
           RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM
Sbjct: 680 RMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESM 739

Query: 481 YFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSP 540
           YFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYT++EGVDYEETFS 
Sbjct: 740 YFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSS 799

Query: 541 VAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 600
           VAMLKSIRILLSIA FYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN
Sbjct: 800 VAMLKSIRILLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLN 859

Query: 601 RSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRKSTKEK 644
           RSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPCV +K  K K
Sbjct: 860 RSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGK 902

[Close]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1097.4 bits (2837), Expect = 0.0e+00
Identity = 538/549 (98.00%), Postives = 542/549 (98.72%), Query Frame = 0


Query: 95  RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 154
           +LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 155 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKIL 214
           LCGPMNVKARGGFEYFISFIDDYSRYGYLYLM+HKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 215 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 274
           RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 275 SFWGYTVETAVYILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 334
           SFWGY VETAV+ILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 335 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 394
           SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 395 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 454
           VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 455 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKV 514
           LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 515 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 574
           QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 575 LEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPC 634
           LEESIFMSQPEGFITQGQEQKVCKLNRSIY LKQASRSWNIRFDTAIKSYGFDQNVDEPC
Sbjct: 708 LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 635 VIRKSTKEK 644
           V +K  K K
Sbjct: 768 VYKKINKGK 776

[Close]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL
Match: A0A5D3BUN8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00360 PE=4 SV=1)

HSP 1 Score: 1045.8 bits (2703), Expect = 7.4e-302
Identity = 514/522 (98.47%), Postives = 517/522 (99.04%), Query Frame = 0


Query: 95  RLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 154
           +LGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD
Sbjct: 228 KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 155 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMKHKSEALEKFKEYKTEVENLLSKKIKIL 214
           LCGPMNVKARGGFEYFISFIDDYSRYGYLYLM+HKSEALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288 LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 215 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 274
           RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS
Sbjct: 348 RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 275 SFWGYTVETAVYILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 334
           SFWGY VETAV+ILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR
Sbjct: 408 SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 335 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 394
           SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR
Sbjct: 468 SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 395 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 454
           VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP
Sbjct: 528 VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 455 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKV 514
           LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVD PEGVKPIGCKWIYKRKRDSAGKV
Sbjct: 588 LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 515 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 574
           QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN
Sbjct: 648 QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 575 LEESIFMSQPEGFITQGQEQKVCKLNRSIYVLKQASRSWNIR 617
           LEESIFMSQPE FITQGQEQKVCKLN SIY LKQASRSWNIR
Sbjct: 708 LEESIFMSQPERFITQGQEQKVCKLNLSIYGLKQASRSWNIR 749

[Close]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 1026.5 bits (2653), Expect = 4.6e-296
Identity = 497/639 (77.78%), Postives = 561/639 (87.79%), Query Frame = 0


Query: 1   MFLENLYIVPKIKRNLVSVSCLIEHMYSINFSMNEAFIYKNGVHICSAKLENNLYVLRPN 60
           + L+++  VP +KRNL+S++C++EH+Y+I+F +NE FI   G+ ICSA  ENNLY LRP 
Sbjct: 356 LILKDVLYVPLMKRNLISIACILEHIYTISFEVNEVFILCKGIQICSAIRENNLYKLRPT 415

Query: 61  EAKAVLNHEMFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVS 120
            A  VLN EMFRT  TQNK+Q++S  +N YLWHLRLGHINL+RI RLVK+G+LN+L+D S
Sbjct: 416 RANVVLNTEMFRTLETQNKKQKVS--SNAYLWHLRLGHINLNRIERLVKSGILNQLEDNS 475

Query: 121 LPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRY 180
           LPPCESCLEGKMTKR FTGKG RAK PLEL+HSDLCGPMNVKARGG+EYFISFIDD+SRY
Sbjct: 476 LPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRY 535

Query: 181 GYLYLMKHKSEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQL 240
           G++YL+ HKSE+ EKFKEYK EVEN + K IK LRSDRGGEYMD +FQDY+IE GIQSQL
Sbjct: 536 GHVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQL 595

Query: 241 SAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVSETP 300
           SAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP SFWGY +ETA++ILNNVPSKSV ETP
Sbjct: 596 SAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETP 655

Query: 301 FELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRV 360
           +ELW+GRK SL +FRIWGCPAHVLV NPKKLEPRS+LC FVGYPKE+RGGLF+ PQEN+V
Sbjct: 656 YELWKGRKSSLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKV 715

Query: 361 FVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSR-VDETTTSGQSHPSQS 420
           FVSTNATFLEEDH RNH+PRSK+VL E    +T   D+   S++ VD+   S QSH SQ 
Sbjct: 716 FVSTNATFLEEDHXRNHQPRSKIVLKEMFKNAT---DKPSSSTKVVDKANISDQSHTSQE 775

Query: 421 LRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMES 480
           LR+PRRSGRVV QPNRYLGL ETQ++IPDDGVEDPL+YKQAMNDVD+DQW+KAM+LEMES
Sbjct: 776 LRVPRRSGRVVHQPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMES 835

Query: 481 MYFNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFS 540
           MYFNSVW LVD P  VKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFS
Sbjct: 836 MYFNSVWTLVDLPSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFS 895

Query: 541 PVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKL 600
           PVAMLKSIRILLSIATFY+YEIWQMDVKTAFLNGNLEESI+M QPEGFI Q QEQKVCKL
Sbjct: 896 PVAMLKSIRILLSIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKL 955

Query: 601 NRSIYVLKQASRSWNIRFDTAIKSYGFDQNVDEPCVIRK 639
            +SIY LKQASRSWNIRFDTAIKSYGF+QNVDEPCV +K
Sbjct: 956 QKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKK 989

[Close]

BLAST of Cmc07g0188811 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 167.9 bits (424), Expect = 2.6e-41
Identity = 83/193 (43.01%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 452 EDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDQPEGVKPIGCKWIYKRKRDSA 511
           ++P +Y +A   +    W  AMD E+ +M     WE+   P   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 512 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 571
           G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 572 NGNLEESIFMSQPEGFIT-QGQE---QKVCKLNRSIYVLKQASRSWNIRFDTAIKSYGFD 631
           NG+L+E I+M  P G+   QG       VC L +SIY LKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 632 QNVDEPCVIRKST 641
           Q+  +     K T
Sbjct: 264 QSHSDHTYFLKIT 273

[Close]

BLAST of Cmc07g0188811 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-15
Identity = 48/133 (36.09%), Postives = 72/133 (54.14%), Query Frame = 0


Query: 422 MPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMY 481
           M  RS   +++ N    LT T  +      ++P S   A+ D     W +AM  E++++ 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI-----KKEPKSVIFALKD---PGWCQAMQEELDALS 60

Query: 482 FNSVWELVDQPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPV 541
            N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q EG+ + ET+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 542 AMLKSIRILLSIA 555
               +IR +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]

BLAST of Cmc07g0188811 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 60.1 bits (144), Expect = 7.7e-09
Identity = 30/75 (40.00%), Postives = 42/75 (56.00%), Query Frame = 0


Query: 87  NNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKE 146
           + T LWH RL H++   +  LVK G L+  K  SL  CE C+ GK  +  F+   +  K 
Sbjct: 67  DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126

Query: 147 PLELIHSDLCGPMNV 162
           PL+ +HSDL G  +V
Sbjct: 127 PLDYVHSDLWGAPSV 141

[Close]

BLAST of Cmc07g0188811 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 1.0e-08
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 256 NRTLLDMVRSMMSYAQLPSSFWGYTVETAVYILNNVPSKSVS-ETPFELWRGRKPSLSHF 315
           NRT+++ VRSM+    LP +F      TAV+I+N  PS +++   P E+W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 316 RIWGCPAHVLVTNPKKLEPRSR 337
           R +GC A++   +  KL+PR++
Sbjct: 62  RRFGCVAYI-HCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Cmc07g0188811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	0.0e+00	98.44	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0035907.1	0.0e+00	97.05	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059226.1	0.0e+00	98.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK02840.1	1.5e-301	98.47	gag/pol protein [Cucumis melo var. makuwa]	[more]
ADJ18449.1	9.5e-296	77.78	gag/pol protein, partial [Bryonia dioica]	[more]

BLAST of Cmc07g0188811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.2e-115	36.07	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.0e-83	29.01	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	4.6e-75	28.33	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.0e-74	27.23	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q12491	2.4e-23	25.39	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc07g0188811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	0.0e+00	98.44	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7T2V9	0.0e+00	97.05	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7UYE8	0.0e+00	98.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5D3BUN8	7.4e-302	98.47	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G0036...	[more]
E2GK51	4.6e-296	77.78	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]

BLAST of Cmc07g0188811 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.6e-41	43.01	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.1e-15	36.09	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00300.1	7.7e-09	40.00	Gag-Pol-related retrotransposon family protein	[more]
ATMG00710.1	1.0e-08	36.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..427
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..425
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 87..636
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 140..316 e-value: 2.3E-42 score: 146.6
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 145..246 e-value: 2.4E-12 score: 47.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 143..308 score: 24.824203
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 79..132 e-value: 7.4E-13 score: 48.2
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 483..631 e-value: 4.1E-52 score: 177.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 142..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0188811.1	Cmc07g0188811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding