Cmc07g0188801 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188801
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr07: 7293435 .. 7294337 (-)
RNA-Seq Expression	Cmc07g0188801
Synteny	Cmc07g0188801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAAAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTATGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

mRNA sequence

ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAAAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTATGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Coding sequence (CDS)

ATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGGATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGACAAATTGTTGGTTCGATATTCGATGCAGAACTCTAAAAAGGGTTTATTACCTTTCAGGCATGGAGTTCACTTGTCTAAGGAACAGAGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTATGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTATCAGTCCAACCCAGGGTTAGACCATTGGACGGCGGTTAAAATTGTTCTCAAGTATCTTAGGAGAACGAGAGACTACATGCTTGTGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGATTCTGATTTCCAAACCGATAAGGATTCTAGGAAATCCACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTACAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTGGCTTAGGAAGTTCCTACATGATTTGGAAGTTGTTCCAAATATGAACTTGCCCATCACTCTATATTGTGATAACAGTGGGGCAGTAGCCAATTCTAAAGAACCTCGCAGCCATAAACGAGGGAAACACATAGAGAGGAAGTATCATCTGATACGGGAGATTGTGCAACGAGGGGATGTGATCGTCACCAAGATCGCTTCGGAGCACAACATTGCTGATCCATTTACGAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTAGAAAGTCTAGGTCTACGAGATATGTACATTAGGTAA

Protein sequence

MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR

Homology

[Close]

BLAST of Cmc07g0188801 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0188801 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1050 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc07g0188801 vs. NCBI nr
Match: KAA0042496.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 600.9 bits (1548), Expect = 6.0e-168
Identity = 297/300 (99.00%), Postives = 299/300 (99.67%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
           QSPKTPQEVEDMRRIPYASA+GSLMY MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+
Sbjct: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 120

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
           RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc07g0188801 vs. NCBI nr
Match: KAA0061170.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 595.5 bits (1534), Expect = 2.5e-166
Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 97  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 156

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
           QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKI+
Sbjct: 157 QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKII 216

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGC
Sbjct: 217 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGC 276

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 277 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 336

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
           RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK LTAKVFEGHLESLGLRDMYIR
Sbjct: 337 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKILTAKVFEGHLESLGLRDMYIR 396

[Close]

BLAST of Cmc07g0188801 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 594.7 bits (1532), Expect = 4.3e-166
Identity = 294/300 (98.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.9e-71
Identity = 138/294 (46.94%), Postives = 195/294 (66.33%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R++M+N+K    P    + LSK+
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
              P T +E  +M ++PY+SA+GSLMYAM+CTRPDI +AVG+VSR+  NPG +HW AVK +
Sbjct: 1095 MCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWI 1154

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            L+YLR T    L +G  D IL GYTD+D   D D+RKS++G +FT +GGA+ W+S  Q C
Sbjct: 1155 LRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1214

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            +A ST EAEY+AA E  KE +WL++FL +L +         +YCD+  A+  SK    H 
Sbjct: 1215 VALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSKNSMYHA 1274

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL 295
            R KHI+ +YH IRE+V    + V KI++  N AD  TK +    FE   E +G+
Sbjct: 1275 RTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

[Close]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 179.1 bits (453), Expect = 7.4e-44
Identity = 107/298 (35.91%), Postives = 165/298 (55.37%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            M DL E ++ +GI+I  + +   + LSQ+ Y+ K+L +++M+N      P    ++    
Sbjct: 1114 MTDLNEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELL 1173

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
             S       ++    P  S +G LMY MLCTRPD+  AV I+SRY S    + W  +K V
Sbjct: 1174 NS-------DEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1233

Query: 121  LKYLRRTRDYMLVYG---AKDLILTGYTDSDFQTDKDSRKSTSGSVFTL-NGGAVVWRSI 180
            L+YL+ T D  L++    A +  + GY DSD+   +  RKST+G +F + +   + W + 
Sbjct: 1234 LRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTK 1293

Query: 181  KQGCIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEP 240
            +Q  +A S+ EAEY+A  EA +EA+WL+  L  + +   +  PI +Y DN G ++ +  P
Sbjct: 1294 RQNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNP 1353

Query: 241  RSHKRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL 295
              HKR KHI+ KYH  RE VQ   + +  I +E+ +AD FTK L A  F    + LGL
Sbjct: 1354 SCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400

[Close]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.3e-35
Identity = 99/295 (33.56%), Postives = 142/295 (48.14%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            +K+  +  Y LGI+    R  + L LSQ  Y   LL R +M  +K    P      L+  
Sbjct: 1160 VKEHEDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLH 1219

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
               K P   E      Y   +GSL Y +  TRPD+ YAV  +S+Y   P  DHW A+K V
Sbjct: 1220 SGTKLPDPTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRV 1279

Query: 121  LKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 180
            L+YL  T D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ 
Sbjct: 1280 LRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQK 1339

Query: 181  CIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSH 240
             +  S+ EAEY +    + E  W+   L +L +   ++ P  +YCDN GA      P  H
Sbjct: 1340 GVVRSSTEAEYRSVANTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFH 1399

Query: 241  KRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL 295
             R KHI   YH IR  VQ G + V  +++   +AD  TK L+   F+     +G+
Sbjct: 1400 SRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443

[Close]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.5e-33
Identity = 99/295 (33.56%), Postives = 140/295 (47.46%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            +KD  E  Y LGI+    R    L LSQ  YI  LL R +M  +K    P      LS  
Sbjct: 1177 VKDHEELHYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLY 1236

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
               K     E      Y   +GSL Y +  TRPDI YAV  +S++   P  +H  A+K +
Sbjct: 1237 SGTKLTDPTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRI 1296

Query: 121  LKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 180
            L+YL  T ++ + +     L L  Y+D+D+  DKD   ST+G +  L    + W S KQ 
Sbjct: 1297 LRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQK 1356

Query: 181  CIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSH 240
             +  S+ EAEY +    + E  W+   L +L +   +  P  +YCDN GA      P  H
Sbjct: 1357 GVVRSSTEAEYRSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFH 1416

Query: 241  KRGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGL 295
             R KHI   YH IR  VQ G + V  +++   +AD  TK L+   F+     +G+
Sbjct: 1417 SRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460

[Close]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.0e-30
Identity = 67/133 (50.38%), Postives = 94/133 (70.68%), Query Frame = 0


Query: 72  MRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYM 131
           M+ +PY SA+G++MY M+ TRPD+  AVG++S++ S+P   HW A+K VL+YL+ T+ Y 
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 132 LVY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEY 191
           L +  A    L GY+D+D+  D +SR+STSG +F LNGG V WRS KQ  +A S+ E EY
Sbjct: 61  LEFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEY 120

Query: 192 VAACEAAKEAVWL 204
           +A  EA +EAVWL
Sbjct: 121 MALSEATQEAVWL 133

[Close]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 7.7e-169
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 936  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 7.7e-169
Identity = 299/300 (99.67%), Postives = 300/300 (100.00%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 810  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 869

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV
Sbjct: 870  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 929

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 930  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 989

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 990  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1049

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1050 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1109

[Close]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL
Match: A0A5A7TKM4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00470 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 2.9e-168
Identity = 297/300 (99.00%), Postives = 299/300 (99.67%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
           QSPKTPQEVEDMRRIPYASA+GSLMY MLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+
Sbjct: 61  QSPKTPQEVEDMRRIPYASAVGSLMYVMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 120

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC
Sbjct: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
           RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300

[Close]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL
Match: A0A5A7V1F5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00440 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 1.2e-166
Identity = 295/300 (98.33%), Postives = 297/300 (99.00%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 97  MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 156

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
           QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWT VKI+
Sbjct: 157 QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTTVKII 216

Query: 121 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
           LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLN GAVVWRSIKQGC
Sbjct: 217 LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNEGAVVWRSIKQGC 276

Query: 181 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
           IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 277 IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 336

Query: 241 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
           RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTK LTAKVFEGHLESLGLRDMYIR
Sbjct: 337 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKILTAKVFEGHLESLGLRDMYIR 396

[Close]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.1e-166
Identity = 294/300 (98.00%), Postives = 298/300 (99.33%), Query Frame = 0


Query: 1    MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
            MKDLGE QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE
Sbjct: 936  MKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 995

Query: 61   QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            QSPKTPQEVEDMRRIPYASA+GSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKI+
Sbjct: 996  QSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKII 1055

Query: 121  LKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGC 180
            LKYLRRTRDYMLVYGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVWRSIKQGC
Sbjct: 1056 LKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGC 1115

Query: 181  IADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 240
            IADSTMEAEYVAACEAAKEAVWL+KFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK
Sbjct: 1116 IADSTMEAEYVAACEAAKEAVWLKKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSHK 1175

Query: 241  RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 300
            RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR
Sbjct: 1176 RGKHIERKYHLIREIVQRGDVIVTKIASEHNIADPFTKTLTAKVFEGHLESLGLRDMYIR 1235

[Close]

BLAST of Cmc07g0188801 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 120.2 bits (300), Expect = 2.9e-27
Identity = 81/255 (31.76%), Postives = 130/255 (50.98%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           ++DLG  +Y LG++I R      + + Q  Y   LL    +   K   +P    V  S  
Sbjct: 310 LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 369

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
                  +  D +   Y   +G LMY  + TR DI +AV  +S++   P L H  AV  +
Sbjct: 370 SG----GDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKI 429

Query: 121 LKYLRRTRDYMLVYGAK-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 180
           L Y++ T    L Y ++ ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ 
Sbjct: 430 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 489

Query: 181 CIADSTMEAEYVAACEAAKEAVWLRKFLHDLEVVPNMNLPITLYCDNSGAVANSKEPRSH 240
            ++ S+ EAEY A   A  E +WL +F  +L++   ++ P  L+CDN+ A+  +     H
Sbjct: 490 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFH 549

Query: 241 KRGKHIERKYHLIRE 255
           +R KHIE   H +RE
Sbjct: 550 ERTKHIESDCHSVRE 553

[Close]

BLAST of Cmc07g0188801 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 8.8e-16
Identity = 65/203 (32.02%), Postives = 96/203 (47.29%), Query Frame = 0


Query: 1   MKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKE 60
           MKDLG   Y LGIQI        L LSQ  Y +++L    M + K    P    + L+  
Sbjct: 33  MKDLGPVHYFLGIQI--KTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL--PLKLNSS 92

Query: 61  QSPKTPQEVEDMRRIPYASAMGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIV 120
            S     +  D R     S +G+L Y  L TRPDI YAV IV +    P L  +  +K V
Sbjct: 93  VSTAKYPDPSDFR-----SIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRV 152

Query: 121 LKYLRRTRDY-MLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 180
           L+Y++ T  + + ++    L +  + DSD+     +R+ST+G    L    + W + +Q 
Sbjct: 153 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 212

Query: 181 CIADSTMEAEYVAACEAAKEAVW 203
            ++ S+ E EY A    A E  W
Sbjct: 213 TVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0188801 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.0e-04
Identity = 27/72 (37.50%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 91  TRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGA-KDLILTGYTDSDF 150
           TRPD+ +AV  +S++ S        AV  VL Y++ T    L Y A  DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 151 QTDKDSRKSTSG 162
            +  D+R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of Cmc07g0188801 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	1.6e-168	99.67	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	1.6e-168	99.67	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0042496.1	6.0e-168	99.00	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0061170.1	2.5e-166	98.33	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	4.3e-166	98.00	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0188801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.9e-71	46.94	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.4e-44	35.91	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	6.3e-35	33.56	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	4.5e-33	33.56	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P0CV72	8.0e-30	50.38	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]

BLAST of Cmc07g0188801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	7.7e-169	99.67	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	7.7e-169	99.67	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7TKM4	2.9e-168	99.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G0047...	[more]
A0A5A7V1F5	1.2e-166	98.33	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G0044...	[more]
A0A5A7T2V9	2.1e-166	98.00	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc07g0188801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.9e-27	31.76	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	8.8e-16	32.02	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.0e-04	37.50	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 155..257
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 155..257
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 142..283 e-value: 3.29401E-70 score: 211.943

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0188801.1	Cmc07g0188801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding