Cmc07g0188361 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188361
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr07: 6713941 .. 6716961 (+)
RNA-Seq Expression	Cmc07g0188361
Synteny	Cmc07g0188361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCTAATTATTCTCTTATGAACACTCTCAGTCCTGCTAAATCTTTACCTCCCATTTATGCTGTTGATGGAAATTGTATGAATATCACCCACATTGGCATTGTTAATACTCCCAGTATGAATCTTCCTCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCTGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCTCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCCTCTCCAGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTACTAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTGATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGATTTACATGGATTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTTTCTTGTCATATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAATGACTTCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGTGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATCAATCGTCTTCCTTCCTCCGTTCTTCAGAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCTAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCCCGCCTCTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATATTATGTTCTCTCGTTTGTCCTCCTTCCACACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTAACACATCTATTGACCTGTTTCCTCCCTCTGAGTCCCCACTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGAAATCTTGGACCAATCGTCCATCTCTGATGGCAGACCTGAACCTACTCCAGACACCCCTCGTCGTCGTTCTACTCGGGTAAGGGAACCCCCTATTCATCTCCAAGATTATCACTGTTTTTCCACTATTATTTCTCTTGTTGAACTTACCTCTTATCAAGAGGCTAGTACTGATCCTTTATGGCAGAAAGCGATGAATGATGAATTACAGGCTCTTGAAAAGACGCATACTTGAGACTATGTTGACTTACCTCCTGGTAAAAGACTCATTGGCTGTAAGTGGATTTACAAAATCAAGACTCACTCTGATGGCACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGAATGACGTCTGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTATGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCCTTACTCGCCACACACCACAGGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGCCGCTCAGACGAGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGTCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCTACTGATCGGCGTTCTACAATAGACTATTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGCTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCGGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGACAGCTACTCTGCCACCTTGA

mRNA sequence

ATGACATCTAATTATTCTCTTATGAACACTCTCAGTCCTGCTAAATCTTTACCTCCCATTTATGCTGTTGATGGAAATTGTATGAATATCACCCACATTGGCATTGTTAATACTCCCAGTATGAATCTTCCTCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCTGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCTCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCCTCTCCAGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTACTAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTGATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGATTTACATGGATTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTTTCTTGTCATATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAATGACTTCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGTGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATCAATCGTCTTCCTTCCTCCGTTCTTCAGAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCTAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCCCGCCTCTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATATTATGTTCTCTCGTTTGTCCTCCTTCCACACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTAACACATCTATTGACCTGTTTCCTCCCTCTGAGTCCCCACTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGAAATCTTGGACCAATCGTCCATCTCTGATGGCAGACCTGAACCTACTCCAGACACCCCTCGTCGTCGTTCTACTCGGACTCACTCTGATGGCACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGAATGACGTCTGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTATGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCCTTACTCGCCACACACCACAGGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGCCGCTCAGACGAGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGTCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCTACTGATCGGCGTTCTACAATAGACTATTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGCTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCGGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGACAGCTACTCTGCCACCTTGA

Coding sequence (CDS)

ATGACATCTAATTATTCTCTTATGAACACTCTCAGTCCTGCTAAATCTTTACCTCCCATTTATGCTGTTGATGGAAATTGTATGAATATCACCCACATTGGCATTGTTAATACTCCCAGTATGAATCTTCCTCATACTTACTGTGTCCCAAACTTAACCTTTAATCTAGTATCTGTTGGTCAATTGTGCGACCTTGGCTTAACTGTCTCTTTTTCTCCCAATGGTTGTCAGGTTCAGGATCTGCAGACGGGACAGACGATTGGGACGGGTCGCAAAGTGGGAAGATTGTTTGAGCTCCTATCACTTCAGGTCCCTTCTCCTTCCTCCATTTCTGCCTCTGTCACTGACTCTGATACATATCAGTGGCATCTTCGTCTTGGTCATGCCTCTCCAGAAAAGTTGCGTCATTTAATTTCTATTAACCATTTAAACAGTACTACTAAGTTTGTCCCCTTTAATTGTTTAAATTGCAAACTTGCTAAGCAACCTGCTTTGTCTTTTTCTACATCCACTTCTATATCTGATAAACCTTTTGATTTAATCCATTCTGACATTTGGGGCCCTGCCCCTACCTCCACTGTCCATGGTTATCGCTATTATGTTTTATTTATTGATGATTTCTCTCGATTTACATGGATTTATTTTCTCAAACACCGCTCTGAATTATCTCGCACTTATATTGAGTTTGCTAATATGATTCGCACCCAATTTTCTTGTCATATCAAAACCCTTCGCACCGACAATGCCTTGGAGTATAATGACTTCACTTTTCTATCTTTTCTCTCCCAACAGGGCACTCTTGTTCAGCGCTCCTGCCCCCACACTTCTCAACAAAATGGACGTGCCGAGCGCAAACATCGCCACATTCTTGACTCAGTACGTGCCCTTCTTCTTTCTGCCTCATGCCCTGAGAAATTTTGGGGTGAAGCAGCTCTTACATCCGTCTATACTATCAATCGTCTTCCTTCCTCCGTTCTTCAGAACATCTCTCCATTCGAAAAACTATATGGTACTCCTCCTAACTATTCTAATCTTAAAACCTTCGGTTGTGCCTGCTTTGTTCTTCTGCATCCTCATGAACACACTAAACTTGAACCACGTGCCCGCCTCTGTTGTTTTCTTGGCTATGGCACAGAACATAAAGGTTTTCGTTGTTGGGATCCCCTTTCCAATAGACTTCGTATATCTCGCCATGTCACATTTTGGGAGCATATTATGTTCTCTCGTTTGTCCTCCTTCCACACCTCCTTCTCTAGTCCTCAACCTTTCTTCACTAACACATCTATTGACCTGTTTCCTCCCTCTGAGTCCCCACTTGGTAATGAGCTTGCTCAATCTGCACCTACTTCGGAAATCTTGGACCAATCGTCCATCTCTGATGGCAGACCTGAACCTACTCCAGACACCCCTCGTCGTCGTTCTACTCGGACTCACTCTGATGGCACTATTGAGCGATATAAGGCTCGTCTTGTAGCAAAAGGGTATTCCCAAGAATATGGTATTGACTATGAAGAAACATTTGCTCATGTGGCTCGAATGACGTCTGTTCGCAGTTTATTAGCTGTTGCTGCTGCCAAGCAGTGGCCTCTTCTTCAGATGGATGTTAAAAATGCTTTTCTTAATGGGACTCTTTCTGAAGAAGTGTATATGAAGCCACCTCCTGGTACTTCTTCTCCTCCTCACAAGGTATGTCTCTTGCGTCGCGCACTATATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGCCACATTTAGCTCTACCATCACTCAACTTGGTTTTACTTCTAGTCCTCATGACACTGCACTCCTTACTCGCCACACACCACAGGGAATTGTTCTCCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAAGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTGGATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGCCGCTCAGACGAGTATTTATTGTCCCAAGCTAAATATGCCTCTGATCTTTTAGCTCGCTCAGAAATCACTGACTCTAACACCGCTTCAACGCCGTTAGATCCCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTAGTTGGCAGTCTCATCTATCTAACAGTGACTCGCCCAGACATTGCATATGCTGTTCACATTGTTAGCCAATTTATGGCTGCTCCTCGAACCATCCATTTTACTGTCGTACTACGTATCCTTCGCTATATCAAAGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCTCTCTTGTATTATCTGGCTATTCTGATGCAGATTGGGCTGGGGATCCTACTGATCGGCGTTCTACAATAGACTATTGCTTCTACTTAGGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCGTGCTCTTGCTGATACTACCGCTGAACTGTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGCAGGGTCCCACTCTCCTTTATTGTGATAATCGTAGTGCCATCCAAATTGCCCACAATGATGTTTTCCATGAGCGTACAAAGCACATCGAAAATGATTGTCACTTCATTCGTCATCATCTCTTGAGTAACACTCTTCTTTTGCAACCTGTCTCCACCACTGAGCAACCGGCTGATATCTTCACCAAAGCCTTACCATCTACTCGCTTCAATCAATTGCGTACCAAACTCAAGCTGACAGCTACTCTGCCACCTTGA

Protein sequence

MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVGQLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTYQWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCHIKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSPQPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTRTHSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATLPP

Homology

[Close]

BLAST of Cmc07g0188361 vs. NCBI nr
Match: KAA0041601.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >KAA0065379.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK12000.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1739.5 bits (4504), Expect = 0.0e+00
Identity = 879/1006 (87.38%), Postives = 893/1006 (88.77%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFSTSTSI DKPFDL
Sbjct: 450  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 510  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA
Sbjct: 570  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYGTPPNYSNLK FGCACFVLL PHE
Sbjct: 630  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 690  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            Q FFT+TSIDLFP SES  GNELAQSAPTS   DQSSISDG P+P PD P RRSTR    
Sbjct: 750  QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 810  PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869

Query: 541  ---------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQ 600
                     THSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTSVRSLLAVAAAKQ
Sbjct: 870  GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929

Query: 601  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
            WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989

Query: 661  ITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 720
            ITQLGFTSSPHDTAL TRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Sbjct: 990  ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049

Query: 721  GSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLE 780
            GSLNYFLGLEVSRRSD YLLSQAKYASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109

Query: 781  DVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQ 840
            +VSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169

Query: 841  FSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 900
            FSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229

Query: 901  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 934
            LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRH
Sbjct: 1230 LADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 1289

[Close]

BLAST of Cmc07g0188361 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1738.4 bits (4501), Expect = 0.0e+00
Identity = 878/1006 (87.28%), Postives = 893/1006 (88.77%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFE+LSLQVPSP SISA VTDSDTY
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFEVLSLQVPSP-SISAPVTDSDTY 449

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFSTSTSI DKPFDL
Sbjct: 450  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 510  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA
Sbjct: 570  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYGTPPNYSNLK FGCACFVLL PHE
Sbjct: 630  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 690  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            Q FFT+TSIDLFP SES  GNELAQSAPTS   DQSSISDG P+P PD P RRSTR    
Sbjct: 750  QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 810  PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869

Query: 541  ---------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQ 600
                     THSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTSVRSLLAVAAAKQ
Sbjct: 870  GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929

Query: 601  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
            WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989

Query: 661  ITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 720
            ITQLGFTSSPHDTAL TRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Sbjct: 990  ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049

Query: 721  GSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLE 780
            GSLNYFLGLEVSRRSD YLLSQAKYASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109

Query: 781  DVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQ 840
            +VSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169

Query: 841  FSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 900
            FSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229

Query: 901  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 934
            LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRH
Sbjct: 1230 LADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 1289

[Close]

BLAST of Cmc07g0188361 vs. NCBI nr
Match: TYK04714.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1738.0 bits (4500), Expect = 0.0e+00
Identity = 878/1006 (87.28%), Postives = 893/1006 (88.77%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFSTSTSI DKPFDL
Sbjct: 450  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 510  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA
Sbjct: 570  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYGTPPNYSNLK FGCACFVLL PHE
Sbjct: 630  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 690  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            Q FFT+TSIDLFP SES  GNELAQSAPTS   DQSSISDG P+P PD P RRSTR    
Sbjct: 750  QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 810  PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869

Query: 541  ---------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQ 600
                     THSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTSVRSLLAVAAAKQ
Sbjct: 870  GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929

Query: 601  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
            WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989

Query: 661  ITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 720
            ITQLGFTSSPHDTAL TRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Sbjct: 990  ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049

Query: 721  GSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLE 780
            GSLNYFLGLEVSRRSD YLLSQAKYASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109

Query: 781  DVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQ 840
            +VSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169

Query: 841  FSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 900
            FSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229

Query: 901  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 934
            LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRH
Sbjct: 1230 LADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 1289

[Close]

BLAST of Cmc07g0188361 vs. NCBI nr
Match: TYK21532.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1728.4 bits (4475), Expect = 0.0e+00
Identity = 874/1006 (86.88%), Postives = 888/1006 (88.27%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTSNYSLMNT SP KSLPPIYA DGNCMNITH G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 170  MTSNYSLMNTPSPTKSLPPIYAADGNCMNITHTGTINTPSLNLPHTYCVPNLTFNLVSVG 229

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDL LTVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 230  QLCDLRLTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 289

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFS STSI DKPFDL
Sbjct: 290  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSKSTSICDKPFDL 349

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPT+TVHGYRYYVLFIDDFSRFTWIYFLKHRSELS TYIEFANMIRTQFSC 
Sbjct: 350  IHSDIWGPAPTTTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSHTYIEFANMIRTQFSCP 409

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDN+ EY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKH HILDSVRALLLSA
Sbjct: 410  IKTLRTDNSFEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHHHILDSVRALLLSA 469

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPS VLQNISPFEKLYGTPPNYSNLK FGCACFVLLHPHE
Sbjct: 470  SCPEKFWGEAALTSVYTINRLPSFVLQNISPFEKLYGTPPNYSNLKVFGCACFVLLHPHE 529

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFHTSFSSP
Sbjct: 530  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHTSFSSP 589

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            Q FFT+TSIDLFP  ES   NELAQSAPTS   DQSSISDG P+P+PD P RRSTR    
Sbjct: 590  QSFFTDTSIDLFPLPESTPDNELAQSAPTSATSDQSSISDGNPDPSPDIPPRRSTRVRAP 649

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 650  PSHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKTHTWDYVDLPPGKRPI 709

Query: 541  ---------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQ 600
                     THSDGTIERYKARLVAKGYSQE+GIDYEETFA VARMTSVRSLLAVAAAKQ
Sbjct: 710  GCKWIYKIKTHSDGTIERYKARLVAKGYSQEFGIDYEETFAPVARMTSVRSLLAVAAAKQ 769

Query: 601  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
            WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 770  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 829

Query: 661  ITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 720
            ITQLGFTSSPHDTAL TRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL
Sbjct: 830  ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 889

Query: 721  GSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLE 780
            GSLNYFLGLEVSRRSD YLLSQAKYASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE
Sbjct: 890  GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 949

Query: 781  DVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQ 840
            +VSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 950  NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1009

Query: 841  FSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 900
            FSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Sbjct: 1010 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1069

Query: 901  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 934
            LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRH
Sbjct: 1070 LADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 1129

[Close]

BLAST of Cmc07g0188361 vs. NCBI nr
Match: TYK23446.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 1714.1 bits (4438), Expect = 0.0e+00
Identity = 862/962 (89.60%), Postives = 869/962 (90.33%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTSNYSLMNT SPAKSLPPIYA DGNCMNITHIG VNTPSMNLPHTYCVPNLTFNLV VG
Sbjct: 421  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVG 480

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLGL VSFSPNGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSPSSISA VTDSDTY
Sbjct: 481  QLCDLGLIVSFSPNGCQVQDSQTGQTIGTGRKVGRLFELLSLQVPSPSSISAPVTDSDTY 540

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKL KQPALSFSTSTSISDKPFDL
Sbjct: 541  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDL 600

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYV FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSC 
Sbjct: 601  IHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCP 660

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Sbjct: 661  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA 720

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTIN LPSSVLQNISPFEKLYGTPPNY NLKTFGCACFVLLHPHE
Sbjct: 721  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHE 780

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFHTSFSSP
Sbjct: 781  HTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSP 840

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            QPFFT+TSIDLFPPSESPLGNELAQSAPTS   DQSSISDG PEPTPDTP RRSTR    
Sbjct: 841  QPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRALEK 900

Query: 481  -------------------------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVA 540
                                     THSD TIERYKARL+AKG                 
Sbjct: 901  THTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLIAKG----------------- 960

Query: 541  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 600
                   LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPP GTSSPPHKVCLLRRALY
Sbjct: 961  -------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPLGTSSPPHKVCLLRRALY 1020

Query: 601  GLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAI 660
            GLKQAPRAWF TFSSTITQLGFTSSPHDT L TRHTPQGIVLLLLYVDDMIITGNDPQAI
Sbjct: 1021 GLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAI 1080

Query: 661  SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTP 720
            SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSD YLLSQAKY SDLLARS ITDSNTASTP
Sbjct: 1081 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLARSGITDSNTASTP 1140

Query: 721  LDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 780
            LDPNVHLTPYDGVPLE+VS YRQLVGSLIYLTVT PDIAYAVHIVSQFM  PRTIHFT V
Sbjct: 1141 LDPNVHLTPYDGVPLEEVSPYRQLVGSLIYLTVTHPDIAYAVHIVSQFMDVPRTIHFTAV 1200

Query: 781  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSK 840
            LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSK
Sbjct: 1201 LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1260

Query: 841  KQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 900
            KQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF
Sbjct: 1261 KQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 1320

Query: 901  HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATL 934
            HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALP TRFNQLRTKLKLTATL
Sbjct: 1321 HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATL 1358

[Close]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 1.2e-177
Identity = 407/1134 (35.89%), Postives = 571/1134 (50.35%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPS----MNLPHTYCVPNLTFNL 60
            +TS+++ ++   P      +   DG+ + I+H G  +  +    +NL +   VPN+  NL
Sbjct: 341  ITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNL 400

Query: 61   VSVGQLCDL-GLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVT 120
            +SV +LC+  G++V F P   QV+DL TG  +  G+    L+E   +    P S+ AS +
Sbjct: 401  ISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE-WPIASSQPVSLFASPS 460

Query: 121  DSDTY-QWHLRLGHASPEKLRHLI---SINHLNSTTKFVPFNCLNCKLAKQPALSFSTST 180
               T+  WH RLGH +P  L  +I   S++ LN + KF+  +C +C + K   + FS ST
Sbjct: 461  SKATHSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFL--SCSDCLINKSNKVPFSQST 520

Query: 181  SISDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFAN 240
              S +P + I+SD+W  +P  +   YRYYV+F+D F+R+TW+Y LK +S++  T+I F N
Sbjct: 521  INSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKN 580

Query: 241  MIRTQFSCHIKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 300
            ++  +F   I T  +DN  E+       + SQ G     S PHT + NG +ERKHRHI++
Sbjct: 581  LLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVE 640

Query: 301  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 360
            +   LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF+KL+GT PNY  L+ FGCA
Sbjct: 641  TGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCA 700

Query: 361  CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH------- 420
            C+  L P+   KL+ ++R C FLGY      + C    ++RL ISRHV F E+       
Sbjct: 701  CYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNY 760

Query: 421  ---------------------------------------------------------IMF 480
                                                                     +  
Sbjct: 761  LATLSPVQEQRRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSS 820

Query: 481  SRL-SSFHTSF-SSPQP----------------------FFTNTSIDLFPPSESPLGNEL 540
            S L SSF +SF SSP+P                         NTS +  P +ESP  ++L
Sbjct: 821  SNLDSSFSSSFPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQN-NPTNESP--SQL 880

Query: 541  AQSAPT------SEILDQSSISDGRPEPTPDT---------------------------- 600
            AQS  T      S     +S S     PTP +                            
Sbjct: 881  AQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGT 940

Query: 601  ------------------------PRRR-------------------------------- 660
                                    PR                                  
Sbjct: 941  RAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPP 1000

Query: 661  -------------STRTHSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLL 720
                         + + +SDG++ RYKARLVAKGY+Q  G+DY ETF+ V + TS+R +L
Sbjct: 1001 PSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVL 1060

Query: 721  AVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLKQAPR 780
             VA  + WP+ Q+DV NAFL GTL+++VYM  PPG      P+ VC LR+ALYGLKQAPR
Sbjct: 1061 GVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPR 1120

Query: 781  AWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYL 840
            AW+    + +  +GF +S  DT+L      + IV +L+YVDD++ITGNDP  + +    L
Sbjct: 1121 AWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNL 1180

Query: 841  GQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHL 900
             Q F +KD   L+YFLG+E  R      LSQ +Y  DLLAR+ +  +   +TP+ P+  L
Sbjct: 1181 SQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKL 1240

Query: 901  TPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYI 933
            + Y G  L D + YR +VGSL YL  TRPDI+YAV+ +SQFM  P   H   + RILRY+
Sbjct: 1241 SLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYL 1300

[Close]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 2.2e-171
Identity = 395/1139 (34.68%), Postives = 553/1139 (48.55%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTP----SMNLPHTYCVPNLTFNL 60
            +TS+++ ++   P      +   DG+ + ITH G  + P    S++L     VPN+  NL
Sbjct: 320  ITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNL 379

Query: 61   VSVGQLCDLG-LTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVT 120
            +SV +LC+   ++V F P   QV+DL TG  +  G+    L+E       + S  ++  +
Sbjct: 380  ISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCS 439

Query: 121  DSDTYQWHLRLGHASPEKLRHLISINH----LNSTTKFVPFNCLNCKLAKQPALSFSTST 180
             +    WH RLGH S   L  +IS NH    LN + K +  +C +C + K   + FS ST
Sbjct: 440  KATHSSWHSRLGHPSLAILNSVIS-NHSLPVLNPSHKLL--SCSDCFINKSHKVPFSNST 499

Query: 181  SISDKPFDLIHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFAN 240
              S KP + I+SD+W  +P  ++  YRYYV+F+D F+R+TW+Y LK +S++  T+I F +
Sbjct: 500  ITSSKPLEYIYSDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKS 559

Query: 241  MIRTQFSCHIKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD 300
            ++  +F   I TL +DN  E+       +LSQ G     S PHT + NG +ERKHRHI++
Sbjct: 560  LVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVE 619

Query: 301  SVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCA 360
                LL  AS P+ +W  A   +VY INRLP+ +LQ  SPF+KL+G PPNY  LK FGCA
Sbjct: 620  MGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCA 679

Query: 361  CFVLLHPHEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLS 420
            C+  L P+   KLE +++ C F+GY      + C    + RL  SRHV F E       +
Sbjct: 680  CYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTT 739

Query: 421  SF------------------HTSF------------------------SSPQPFFT---- 480
            +F                  HT+                         SSP P  T    
Sbjct: 740  NFGVSTSQEQRSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVS 799

Query: 481  ---------------------------------------NTSIDLFPPSESPLGNELAQS 540
                                                   N+ I   P   SP  N   Q+
Sbjct: 800  SSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQN 859

Query: 541  APTSEILDQSSISDGR-PEPT-----PDTPRRRSTRT----------------------- 600
            +P    L QS IS    P P+     P++P   ST T                       
Sbjct: 860  SP----LPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNT 919

Query: 601  ------------------------------------------------------------ 660
                                                                        
Sbjct: 920  HSMATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWD 979

Query: 661  ----------------------HSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTS 720
                                  +SDG++ RYKARLVAKGY+Q  G+DY ETF+ V + TS
Sbjct: 980  LVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTS 1039

Query: 721  VRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGL 780
            +R +L VA  + WP+ Q+DV NAFL GTL++EVYM  PPG      P  VC LR+A+YGL
Sbjct: 1040 IRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGL 1099

Query: 781  KQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISD 840
            KQAPRAW+    + +  +GF +S  DT+L      + I+ +L+YVDD++ITGND   +  
Sbjct: 1100 KQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKH 1159

Query: 841  LQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLD 900
                L Q F +K+   L+YFLG+E  R      LSQ +Y  DLLAR+ +  +   +TP+ 
Sbjct: 1160 TLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMA 1219

Query: 901  PNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLR 933
             +  LT + G  L D + YR +VGSL YL  TRPD++YAV+ +SQ+M  P   H+  + R
Sbjct: 1220 TSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKR 1279

[Close]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.5e-130
Identity = 306/895 (34.19%), Postives = 455/895 (50.84%), Query Frame = 0


Query: 122  WHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDLI 181
            WH R+GH S + L+ L   + ++         C  C   KQ  +SF TS+       DL+
Sbjct: 425  WHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDLV 484

Query: 182  HSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCHI 241
            +SD+ GP    ++ G +Y+V FIDD SR  W+Y LK + ++ + + +F  ++  +    +
Sbjct: 485  YSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKL 544

Query: 242  KTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSAS 301
            K LR+DN  EY    F  + S  G   +++ P T Q NG AER +R I++ VR++L  A 
Sbjct: 545  KRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAK 604

Query: 302  CPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHEH 361
             P+ FWGEA  T+ Y INR PS  L    P         +YS+LK FGC  F  +   + 
Sbjct: 605  LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 664

Query: 362  TKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSPQ 421
            TKL+ ++  C F+GYG E  G+R WDP+  ++  SR V F E  + +         +   
Sbjct: 665  TKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGII 724

Query: 422  P-FFTNTSIDLFPPSESPLGNELA-QSAPTSEILDQ-SSISDGRPEPTPDT-------PR 481
            P F T  S    P S     +E++ Q     E+++Q   + +G  E    T       P 
Sbjct: 725  PNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 784

Query: 482  RRSTRTH----------------------------------------------------- 541
            RRS R                                                       
Sbjct: 785  RRSERPRVESRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYK 844

Query: 542  ----------------------SDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSV 601
                                   D  + RYKARLV KG+ Q+ GID++E F+ V +MTS+
Sbjct: 845  LVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSI 904

Query: 602  RSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPG--TSSPPHKVCLLRRALYGLK 661
            R++L++AA+    + Q+DVK AFL+G L EE+YM+ P G   +   H VC L ++LYGLK
Sbjct: 905  RTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLK 964

Query: 662  QAPRAWFATFSSTITQLGFTSSPHDTAL-LTRHTPQGIVLLLLYVDDMIITGNDPQAISD 721
            QAPR W+  F S +    +  +  D  +   R +    ++LLLYVDDM+I G D   I+ 
Sbjct: 965  QAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAK 1024

Query: 722  LQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDEYLLSQAKYASDLLARSEITDSNTASTP 781
            L+  L + F+MKDLG     LG+++   R S +  LSQ KY   +L R  + ++   STP
Sbjct: 1025 LKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTP 1084

Query: 782  LDPNVHL-------TPYDGVPLEDVSLYRQLVGSLIYLTV-TRPDIAYAVHIVSQFMAAP 841
            L  ++ L       T  +   +  V  Y   VGSL+Y  V TRPDIA+AV +VS+F+  P
Sbjct: 1085 LAGHLKLSKKMCPTTVEEKGNMAKVP-YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENP 1144

Query: 842  RTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGD 901
               H+  V  ILRY++GT G  L F   S  +L GY+DAD AGD  +R+S+  Y F    
Sbjct: 1145 GKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSG 1204

Query: 902  SLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAI 919
              ISW+SK Q  V+ S+TE+EY A  +T  E++WL+  L ++G+ Q+   ++YCD++SAI
Sbjct: 1205 GAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK-EYVVYCDSQSAI 1264

[Close]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 411.8 bits (1057), Expect = 2.1e-113
Identity = 317/1102 (28.77%), Postives = 500/1102 (45.37%), Query Frame = 0


Query: 17   LPPI---YAVDGNCMNITHIGIV---NTPSMNLPHTYCVPNLTFNLVSVGQLCDLGLTVS 76
            +PP+    A  G  +  T  GIV   N   + L           NL+SV +L + G+++ 
Sbjct: 313  VPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQEAGMSIE 372

Query: 77   FSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTYQ-WHLRLGHA 136
            F  +G  +   + G  +     V     L ++ V +  + S +    + ++ WH R GH 
Sbjct: 373  FDKSGVTIS--KNGLMV-----VKNSGMLNNVPVINFQAYSINAKHKNNFRLWHERFGHI 432

Query: 137  SPEKL-----RHLIS----INHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 196
            S  KL     +++ S    +N+L  + +     CLN K A+ P       T I  +P  +
Sbjct: 433  SDGKLLEIKRKNMFSDQSLLNNLELSCEICE-PCLNGKQARLPFKQLKDKTHIK-RPLFV 492

Query: 197  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 256
            +HSD+ GP    T+    Y+V+F+D F+ +   Y +K++S++   + +F       F+  
Sbjct: 493  VHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNLK 552

Query: 257  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 316
            +  L  DN  EY       F  ++G     + PHT Q NG +ER  R I +  R ++  A
Sbjct: 553  VVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGA 612

Query: 317  SCPEKFWGEAALTSVYTINRLPSSVLQNIS--PFEKLYGTPPNYSNLKTFGCACFVLLHP 376
               + FWGEA LT+ Y INR+PS  L + S  P+E  +   P   +L+ FG   +V +  
Sbjct: 613  KLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHI-K 672

Query: 377  HEHTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWE-HIMFSRLSSFHTSF 436
            ++  K + ++    F+GY  E  GF+ WD ++ +  ++R V   E +++ SR   F T F
Sbjct: 673  NKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVF 732

Query: 437  -----SSPQPFFTNTSIDL----------------------------FP----------- 496
                  S    F N S  +                            FP           
Sbjct: 733  LKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEF 792

Query: 497  PSESPLGNEL-------------------------------------AQSAPTSEILDQS 556
            P+ES   + +                                     ++ + T+E L + 
Sbjct: 793  PNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEI 852

Query: 557  SISDGRPEPTPDTPRRRSTRTHSDGTIE-------------------------------- 616
             I +       +   RRS R  +   I                                 
Sbjct: 853  GIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYR 912

Query: 617  ----------------------------------------------------RYKARLVA 676
                                                                RYKARLVA
Sbjct: 913  DDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVA 972

Query: 677  KGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 736
            +G++Q+Y IDYEETFA VAR++S R +L++       + QMDVK AFLNGTL EE+YM+ 
Sbjct: 973  RGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRL 1032

Query: 737  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTA--LLTRHTPQG 796
            P G S     VC L +A+YGLKQA R WF  F   + +  F +S  D    +L +     
Sbjct: 1033 PQGISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINE 1092

Query: 797  IVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQA 856
             + +LLYVDD++I   D   +++ + YL + F M DL  + +F+G+ +  + D+  LSQ+
Sbjct: 1093 NIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQS 1152

Query: 857  KYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSL-YRQLVGSLIYLTV-TRPD 916
             Y   +L++  + + N  STPL   ++    +    ED +   R L+G L+Y+ + TRPD
Sbjct: 1153 AYVKKILSKFNMENCNAVSTPLPSKINYELLNSD--EDCNTPCRSLIGCLMYIMLCTRPD 1212

Query: 917  IAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSL--VLSGYSDADWAG 928
            +  AV+I+S++ +   +  +  + R+LRY+KGT+   L F    +    + GY D+DWAG
Sbjct: 1213 LTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAG 1272

[Close]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-47
Identity = 103/224 (45.98%), Postives = 142/224 (63.39%), Query Frame = 0


Query: 614 LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYA 673
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++        LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 674 SDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAV 733
             +L  + + D    STPL   ++ +        D S +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 734 HIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRS 793
           +IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 794 TIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLW 838
           T  +C +LG ++ISW +K+Q  VSRSSTE+EYRALA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 1739.5 bits (4504), Expect = 0.0e+00
Identity = 879/1006 (87.38%), Postives = 893/1006 (88.77%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFSTSTSI DKPFDL
Sbjct: 450  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 509

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 510  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA
Sbjct: 570  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 629

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYGTPPNYSNLK FGCACFVLL PHE
Sbjct: 630  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 689

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 690  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            Q FFT+TSIDLFP SES  GNELAQSAPTS   DQSSISDG P+P PD P RRSTR    
Sbjct: 750  QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809

Query: 481  ------------------------------------------------------------ 540
                                                                        
Sbjct: 810  PIHLQDYHCFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGKRPI 869

Query: 541  ---------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQ 600
                     THSDGTIERYKARLVAKGYSQEYGIDYEETFA VARMTSVRSLLAVAAAKQ
Sbjct: 870  GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQ 929

Query: 601  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 660
            WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST
Sbjct: 930  WPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSST 989

Query: 661  ITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDL 720
            ITQLGFTSSPHDTAL TRHTPQGIVLLLLYVDDMIITGNDP AISDLQHYLGQHFEMKDL
Sbjct: 990  ITQLGFTSSPHDTALFTRHTPQGIVLLLLYVDDMIITGNDPHAISDLQHYLGQHFEMKDL 1049

Query: 721  GSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLE 780
            GSLNYFLGLEVSRRSD YLLSQAKYASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE
Sbjct: 1050 GSLNYFLGLEVSRRSDGYLLSQAKYASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLE 1109

Query: 781  DVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQ 840
            +VSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQ
Sbjct: 1110 NVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQ 1169

Query: 841  FSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 900
            FSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRA
Sbjct: 1170 FSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRA 1229

Query: 901  LADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 934
            LAD TAELLWLRWLLADMGVPQQGPTLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRH
Sbjct: 1230 LADATAELLWLRWLLADMGVPQQGPTLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRH 1289

[Close]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL
Match: A0A5A7TG30 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold262G00660 PE=4 SV=1)

HSP 1 Score: 1714.1 bits (4438), Expect = 0.0e+00
Identity = 862/962 (89.60%), Postives = 869/962 (90.33%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTSNYSLMNT SPAKSLPPIYA DGNCMNITHIG VNTPSMNLPHTYCVPNLTFNLV VG
Sbjct: 379  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVG 438

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLGL VSFSPNGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSPSSISA VTDSDTY
Sbjct: 439  QLCDLGLIVSFSPNGCQVQDSQTGQTIGTGRKVGRLFELLSLQVPSPSSISAPVTDSDTY 498

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKL KQPALSFSTSTSISDKPFDL
Sbjct: 499  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDL 558

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYV FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSC 
Sbjct: 559  IHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCP 618

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Sbjct: 619  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA 678

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTIN LPSSVLQNISPFEKLYGTPPNY NLKTFGCACFVLLHPHE
Sbjct: 679  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHE 738

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFHTSFSSP
Sbjct: 739  HTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSP 798

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            QPFFT+TSIDLFPPSESPLGNELAQSAPTS   DQSSISDG PEPTPDTP RRSTR    
Sbjct: 799  QPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRALEK 858

Query: 481  -------------------------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVA 540
                                     THSD TIERYKARL+AKG                 
Sbjct: 859  THTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLIAKG----------------- 918

Query: 541  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 600
                   LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPP GTSSPPHKVCLLRRALY
Sbjct: 919  -------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPLGTSSPPHKVCLLRRALY 978

Query: 601  GLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAI 660
            GLKQAPRAWF TFSSTITQLGFTSSPHDT L TRHTPQGIVLLLLYVDDMIITGNDPQAI
Sbjct: 979  GLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAI 1038

Query: 661  SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTP 720
            SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSD YLLSQAKY SDLLARS ITDSNTASTP
Sbjct: 1039 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLARSGITDSNTASTP 1098

Query: 721  LDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 780
            LDPNVHLTPYDGVPLE+VS YRQLVGSLIYLTVT PDIAYAVHIVSQFM  PRTIHFT V
Sbjct: 1099 LDPNVHLTPYDGVPLEEVSPYRQLVGSLIYLTVTHPDIAYAVHIVSQFMDVPRTIHFTAV 1158

Query: 781  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSK 840
            LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSK
Sbjct: 1159 LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1218

Query: 841  KQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 900
            KQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF
Sbjct: 1219 KQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 1278

Query: 901  HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATL 934
            HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALP TRFNQLRTKLKLTATL
Sbjct: 1279 HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATL 1316

[Close]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL
Match: A0A5D3DIH5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00030 PE=4 SV=1)

HSP 1 Score: 1714.1 bits (4438), Expect = 0.0e+00
Identity = 862/962 (89.60%), Postives = 869/962 (90.33%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTSNYSLMNT SPAKSLPPIYA DGNCMNITHIG VNTPSMNLPHTYCVPNLTFNLV VG
Sbjct: 421  MTSNYSLMNTPSPAKSLPPIYAADGNCMNITHIGTVNTPSMNLPHTYCVPNLTFNLVFVG 480

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLGL VSFSPNGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSPSSISA VTDSDTY
Sbjct: 481  QLCDLGLIVSFSPNGCQVQDSQTGQTIGTGRKVGRLFELLSLQVPSPSSISAPVTDSDTY 540

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKL KQPALSFSTSTSISDKPFDL
Sbjct: 541  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLVKQPALSFSTSTSISDKPFDL 600

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYV FIDDFSRFTWIYFLKHRS LSRTYIEFANMIRTQFSC 
Sbjct: 601  IHSDIWGPAPTSTVHGYRYYVSFIDDFSRFTWIYFLKHRSALSRTYIEFANMIRTQFSCP 660

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAE KHRHILDS+RA+LLSA
Sbjct: 661  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAECKHRHILDSLRAILLSA 720

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTIN LPSSVLQNISPFEKLYGTPPNY NLKTFGCACFVLLHPHE
Sbjct: 721  SCPEKFWGEAALTSVYTINHLPSSVLQNISPFEKLYGTPPNYYNLKTFGCACFVLLHPHE 780

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGT+HKGFRCWDPLSNRLRISRHVTFWEH MFS LSSFHTSFSSP
Sbjct: 781  HTKLEPRARLCCFLGYGTKHKGFRCWDPLSNRLRISRHVTFWEHTMFSHLSSFHTSFSSP 840

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTR---- 480
            QPFFT+TSIDLFPPSESPLGNELAQSAPTS   DQSSISDG PEPTPDTP RRSTR    
Sbjct: 841  QPFFTDTSIDLFPPSESPLGNELAQSAPTSATSDQSSISDGSPEPTPDTPPRRSTRALEK 900

Query: 481  -------------------------THSDGTIERYKARLVAKGYSQEYGIDYEETFAHVA 540
                                     THSD TIERYKARL+AKG                 
Sbjct: 901  THTWDYVDLPPGKRPIGCKWIYKIKTHSDDTIERYKARLIAKG----------------- 960

Query: 541  RMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTSSPPHKVCLLRRALY 600
                   LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPP GTSSPPHKVCLLRRALY
Sbjct: 961  -------LLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPLGTSSPPHKVCLLRRALY 1020

Query: 601  GLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAI 660
            GLKQAPRAWF TFSSTITQLGFTSSPHDT L TRHTPQGIVLLLLYVDDMIITGNDPQAI
Sbjct: 1021 GLKQAPRAWFDTFSSTITQLGFTSSPHDTTLFTRHTPQGIVLLLLYVDDMIITGNDPQAI 1080

Query: 661  SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTP 720
            SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSD YLLSQAKY SDLLARS ITDSNTASTP
Sbjct: 1081 SDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLARSGITDSNTASTP 1140

Query: 721  LDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVV 780
            LDPNVHLTPYDGVPLE+VS YRQLVGSLIYLTVT PDIAYAVHIVSQFM  PRTIHFT V
Sbjct: 1141 LDPNVHLTPYDGVPLEEVSPYRQLVGSLIYLTVTHPDIAYAVHIVSQFMDVPRTIHFTAV 1200

Query: 781  LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSK 840
            LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRST  YCFYLGDSLISWRSK
Sbjct: 1201 LRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGYCFYLGDSLISWRSK 1260

Query: 841  KQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 900
            KQSVVSRSST+SEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF
Sbjct: 1261 KQSVVSRSSTKSEYRALADTTAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVF 1320

Query: 901  HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTRFNQLRTKLKLTATL 934
            HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALP TRFNQLRTKLKLTATL
Sbjct: 1321 HERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPFTRFNQLRTKLKLTATL 1358

[Close]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL
Match: A0A5A7UPX9 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G00890 PE=4 SV=1)

HSP 1 Score: 1700.6 bits (4403), Expect = 0.0e+00
Identity = 855/981 (87.16%), Postives = 875/981 (89.19%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 330  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 389

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 390  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 449

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQP LSFSTSTSI DKPFDL
Sbjct: 450  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPVLSFSTSTSICDKPFDL 509

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGP PTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 510  IHSDIWGPTPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 569

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILD VR LLLSA
Sbjct: 570  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDLVRGLLLSA 629

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYG PPNYSNLK FGCACFVLL PHE
Sbjct: 630  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGNPPNYSNLKVFGCACFVLLQPHE 689

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 690  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 749

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQSAPTSEILDQSSISDGRPEPTPDTPRRRSTRT--- 480
            Q FFT+TSIDLFP SES  GNELAQSAPTS   DQSSISDG P+P PD P RRSTR    
Sbjct: 750  QSFFTDTSIDLFPLSESTPGNELAQSAPTSATSDQSSISDGNPDPPPDIPPRRSTRVREP 809

Query: 481  ---------------------------------------------HSDGTIERYKARLVA 540
                                                         H+   ++       +
Sbjct: 810  PIHLQDYHYFSTIVSLIEPTSYQEASTDPLWQKAMNDELQALEKMHTWDYVDLPPGSACS 869

Query: 541  KGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 600
            K YSQEYGIDYEETFA VARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP
Sbjct: 870  KRYSQEYGIDYEETFAPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKP 929

Query: 601  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIV 660
            PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDT L TRHTPQGIV
Sbjct: 930  PPGTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTTLFTRHTPQGIV 989

Query: 661  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKY 720
            LLLLYVDDMIITGNDP+AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSD YLLSQAKY
Sbjct: 990  LLLLYVDDMIITGNDPRAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY 1049

Query: 721  ASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYA 780
            ASDLLARS ITDSNTASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVTRPDIAYA
Sbjct: 1050 ASDLLARSGITDSNTASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYA 1109

Query: 781  VHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRR 840
            VHIVSQFMAAPRTIHFT VLRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTD+R
Sbjct: 1110 VHIVSQFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDQR 1169

Query: 841  STIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGP 900
            ST  YCFYLGDSLISWRSKKQSVVSRSSTESEYRALAD TAELLWLRWLLADMGVPQQGP
Sbjct: 1170 STTGYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGP 1229

Query: 901  TLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKA 934
            TLL+CDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKA
Sbjct: 1230 TLLHCDNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKA 1289

[Close]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL
Match: A0A5A7SI12 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold417G00670 PE=4 SV=1)

HSP 1 Score: 1689.9 bits (4375), Expect = 0.0e+00
Identity = 856/976 (87.70%), Postives = 879/976 (90.06%), Query Frame = 0


Query: 1    MTSNYSLMNTLSPAKSLPPIYAVDGNCMNITHIGIVNTPSMNLPHTYCVPNLTFNLVSVG 60
            MTS+YSLMNT SP KSLPPIYA DGNCMNITH+G +NTPS+NLPHTYCVPNLTFNLVSVG
Sbjct: 267  MTSDYSLMNTPSPTKSLPPIYAADGNCMNITHMGTINTPSLNLPHTYCVPNLTFNLVSVG 326

Query: 61   QLCDLGLTVSFSPNGCQVQDLQTGQTIGTGRKVGRLFELLSLQVPSPSSISASVTDSDTY 120
            QLCDLG TVSFS NGCQVQD QTGQTIGTGRKVGRLFELLSLQVPSP SISA VTDSDTY
Sbjct: 327  QLCDLGFTVSFSSNGCQVQDPQTGQTIGTGRKVGRLFELLSLQVPSP-SISAPVTDSDTY 386

Query: 121  QWHLRLGHASPEKLRHLISINHLNSTTKFVPFNCLNCKLAKQPALSFSTSTSISDKPFDL 180
            QWHLRLGHASPEKLRHLISIN+LNS TKFVPFNCLNCKLAKQPALSFSTSTSI DKPFDL
Sbjct: 387  QWHLRLGHASPEKLRHLISINNLNSITKFVPFNCLNCKLAKQPALSFSTSTSICDKPFDL 446

Query: 181  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCH 240
            IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSC 
Sbjct: 447  IHSDIWGPAPTSTVHGYRYYVLFIDDFSRFTWIYFLKHRSELSRTYIEFANMIRTQFSCP 506

Query: 241  IKTLRTDNALEYNDFTFLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 300
            IKTLRTDNALEY D T LSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA
Sbjct: 507  IKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPHTSQQNGRAERKHRHILDSVRALLLSA 566

Query: 301  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFEKLYGTPPNYSNLKTFGCACFVLLHPHE 360
            SCPEKFWGEAALTSVYTINRLPSSVLQNISPFE+LYGTPPNYSNLK FGCACFVLL PHE
Sbjct: 567  SCPEKFWGEAALTSVYTINRLPSSVLQNISPFERLYGTPPNYSNLKVFGCACFVLLQPHE 626

Query: 361  HTKLEPRARLCCFLGYGTEHKGFRCWDPLSNRLRISRHVTFWEHIMFSRLSSFHTSFSSP 420
            HTKLEPRARLCCFLGY TEHKGFRCWDPLSNRLRISRHVTFWEH MFSRLSSFH SFSSP
Sbjct: 627  HTKLEPRARLCCFLGYDTEHKGFRCWDPLSNRLRISRHVTFWEHTMFSRLSSFHASFSSP 686

Query: 421  QPFFTNTSIDLFPPSESPLGNELAQ---------SAPT------------------SEIL 480
            Q FFT+TSIDLFP SES  GNELAQ         S P+                  ++ L
Sbjct: 687  QSFFTDTSIDLFPLSESTPGNELAQSHLLLQPQTSRPSLMGILTLLQTSLLVVILGTDPL 746

Query: 481  DQSSISDGRP--------EPTPDTPRRR--------STRTHSDGTIERYKARLVAKGYSQ 540
             Q +++D           +     P +R          +THSDGTIERYKARLVAKGYSQ
Sbjct: 747  WQKAMNDELQALEKMHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQ 806

Query: 541  EYGIDYEETFAHVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTS 600
            EYGIDYEETF  VARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTS
Sbjct: 807  EYGIDYEETFVPVARMTSVRSLLAVAAAKQWPLLQMDVKNAFLNGTLSEEVYMKPPPGTS 866

Query: 601  SPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALLTRHTPQGIVLLLLY 660
            SPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTAL TRHTPQ IVLLLLY
Sbjct: 867  SPPHKVCLLRRALYGLKQAPRAWFATFSSTITQLGFTSSPHDTALFTRHTPQAIVLLLLY 926

Query: 661  VDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYASDLL 720
            VDDMIITGNDP AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSD YLLSQAKYAS  L
Sbjct: 927  VDDMIITGNDPHAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYASGFL 986

Query: 721  ARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAVHIVS 780
            ARS ITDSN ASTPLDPNVHLTPYDGVPLE+VSLYRQLVGSLIYLTVTRPDIAYAVHIVS
Sbjct: 987  ARSGITDSNAASTPLDPNVHLTPYDGVPLENVSLYRQLVGSLIYLTVTRPDIAYAVHIVS 1046

Query: 781  QFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTIDY 840
            QFMAAPRTIHFT VLRILRY+KGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRST  Y
Sbjct: 1047 QFMAAPRTIHFTAVLRILRYVKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRSTTGY 1106

Query: 841  CFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLWLRWLLADMGVPQQGPTLLYC 900
            CFYLGDSLISWRSKKQSVVSRSSTESEYRALAD TAELLWLRWLLADMGVPQQGPTLL+C
Sbjct: 1107 CFYLGDSLISWRSKKQSVVSRSSTESEYRALADATAELLWLRWLLADMGVPQQGPTLLHC 1166

Query: 901  DNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSNTLLLQPVSTTEQPADIFTKALPSTR 934
            DNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLS+TLLLQ +STTEQPADIFTKALPSTR
Sbjct: 1167 DNRSAIQIAHNDVFHERTKHIENDCHFIRHHLLSHTLLLQSISTTEQPADIFTKALPSTR 1226

[Close]

BLAST of Cmc07g0188361 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 402.5 bits (1033), Expect = 9.1e-112
Identity = 206/415 (49.64%), Postives = 280/415 (67.47%), Query Frame = 0


Query: 478 HSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVAAAKQWPLLQMDVKN 537
           +SDGTIERYKARLVAKGY+Q+ GID+ ETF+ V ++TSV+ +LA++A   + L Q+D+ N
Sbjct: 138 NSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISN 197

Query: 538 AFLNGTLSEEVYMKPPP------GTSSPPHKVCLLRRALYGLKQAPRAWFATFSSTITQL 597
           AFLNG L EE+YMK PP      G S PP+ VC L++++YGLKQA R WF  FS T+   
Sbjct: 198 AFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGF 257

Query: 598 GFTSSPHDTALLTRHTPQGIVLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLN 657
           GF  S  D     + T    + +L+YVDD+II  N+  A+ +L+  L   F+++DLG L 
Sbjct: 258 GFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLK 317

Query: 658 YFLGLEVSRRSDEYLLSQAKYASDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSL 717
           YFLGLE++R +    + Q KYA DLL  + +     +S P+DP+V  + + G    D   
Sbjct: 318 YFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKA 377

Query: 718 YRQLVGSLIYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQ 777
           YR+L+G L+YL +TR DI++AV+ +SQF  APR  H   V++IL YIKGT+G GL +SSQ
Sbjct: 378 YRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQ 437

Query: 778 SSLVLSGYSDADWAGDPTDRRSTIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADT 837
           + + L  +SDA +      RRST  YC +LG SLISW+SKKQ VVS+SS E+EYRAL+  
Sbjct: 438 AEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFA 497

Query: 838 TAELLWLRWLLADMGVPQQGPTLLYCDNRSAIQIAHNDVFHERTKHIENDCHFIR 887
           T E++WL     ++ +P   PTLL+CDN +AI IA N VFHERTKHIE+DCH +R
Sbjct: 498 TDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVR 552

[Close]

BLAST of Cmc07g0188361 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 8.4e-49
Identity = 103/224 (45.98%), Postives = 142/224 (63.39%), Query Frame = 0


Query: 614 LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDEYLLSQAKYA 673
           LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++        LSQ KYA
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 674 SDLLARSEITDSNTASTPLDPNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTRPDIAYAV 733
             +L  + + D    STPL   ++ +        D S +R +VG+L YLT+TRPDI+YAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 734 HIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGYSDADWAGDPTDRRS 793
           +IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  + D+DWAG  + RRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 794 TIDYCFYLGDSLISWRSKKQSVVSRSSTESEYRALADTTAELLW 838
           T  +C +LG ++ISW +K+Q  VSRSSTE+EYRALA T AEL W
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc07g0188361 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-15
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0


Query: 720 IYLTVTRPDIAYAVHIVSQFMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSSLVLSGY 779
           +YLT+TRPD+ +AV+ +SQF +A RT     V ++L Y+KGT+G GL +S+ S L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 780 SDADWAGDPTDRRSTIDYC 799
           +D+DWA  P  RRS   +C
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of Cmc07g0188361 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 57.4 bits (137), Expect = 7.2e-08
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 475 TRTHSDGTIERYKARLVAKGYSQEYGIDYEETFAHVARMTSVRSLLAVA 524
           T+ HSDGT++R KARLVAKG+ QE GI + ET++ V R  ++R++L VA
Sbjct: 77  TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

The following BLAST results are available for this feature:

BLAST of Cmc07g0188361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0041601.1	0.0e+00	87.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	0.0e+00	87.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK04714.1	0.0e+00	87.28	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK21532.1	0.0e+00	86.88	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK23446.1	0.0e+00	89.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc07g0188361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.2e-177	35.89	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.2e-171	34.68	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	2.5e-130	34.19	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.1e-113	28.77	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.2e-47	45.98	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc07g0188361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIT8	0.0e+00	87.38	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TG30	0.0e+00	89.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DIH5	0.0e+00	89.60	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UPX9	0.0e+00	87.16	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7SI12	0.0e+00	87.70	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc07g0188361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	9.1e-112	49.64	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	8.4e-49	45.98	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.2e-15	46.84	Gag-Pol-related retrotransposon family protein	[more]
ATMG00820.1	7.2e-08	55.10	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 482..692 e-value: 5.3E-64 score: 216.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 168..348 e-value: 7.6E-39 score: 135.0
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 103..162 e-value: 1.5E-9 score: 37.6
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 176..275 e-value: 1.7E-9 score: 37.9
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 173..339 score: 19.978071
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 465..480
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 438..463
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 478..805 coord: 49..409
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 778..915 e-value: 1.29387E-78 score: 249.693
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 467..883
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 175..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0188361.1	Cmc07g0188361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding