Cmc07g0188131 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0188131
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase Ty1/copia-type domain-containing protein
Location	CMiso1.1chr07: 6363118 .. 6364011 (-)
RNA-Seq Expression	Cmc07g0188131
Synteny	Cmc07g0188131

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTACAATCGCTTAAGTGAATGTTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCCGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCAATGGAATTTTTATTCATCAATTGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATATAAAAAAGTATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAGGACCAGATATAGCATTTTTAGTAAATTTGGTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGAGACAATTGATATGAGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAAGTTATCTATTTACATGTGGAGGAACTGCTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGTCACTTCATCGAATCGTGCAAAAATTCTTGCAATTCATGAAGCTAGTAAAGAATGTGTATCGTTGAGGTCAATGACTCATCATATTCGAGAAACACGTGGTTTGTCTTTCAGTAAAGATTTACCAACAATATTATTTGAATATAATACCACATGA

mRNA sequence

ATGTGGTACAATCGCTTAAGTGAATGTTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCCGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCAATGGAATTTTTATTCATCAATTGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATATAAAAAAGTATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAGGACCAGATATAGCATTTTTAGTAAATTTGGTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGAGACAATTGATATGAGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAAGTTATCTATTTACATGTGGAGGAACTGCTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGTCACTTCATCGAATCGTGCAAAAATTCTTGCAATTCATGAAGCTAGTAAAGAATGTGTATCGTTGAGGTCAATGACTCATCATATTCGAGAAACACGTGGTTTGTCTTTCAGTAAAGATTTACCAACAATATTATTTGAATATAATACCACATGA

Coding sequence (CDS)

ATGTGGTACAATCGCTTAAGTGAATGTTTATTGAAAGAAGGTTATCAAAATAATCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGTCAGGATTTGCGATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCCGAAGAGCTTTCAAAGGCAATAGAATATCTCAAAAAGGAATTTGAAATGAAAGATCTTGGTAAGACAAAATTTTGCCTTGGCTTACAAATCGAGCATTTAGCCAATGGAATTTTTATTCATCAATTGACATATACAGAAAAGATTTTAAAAAGATTCTACATGGACAAAGCACACCCATTGAACATTCCAATGGTGGTTCGATCACTAGATATAAAAAAGTATATCTTTCGACCTCGAGAAGATAATGAAGAATTACTTGGTCCTGAAGTACCGTACCTTAGTGCAATAGGTGCACTAATGTATCTTGCTAATAACACAGGACCAGATATAGCATTTTTAGTAAATTTGGTAGCAAGATATAGTTCTTCTCCAACAAAAAGACATTGGAATGAAGTTAAGCATGTACTTCGTTATCTTCGAGAGACAATTGATATGAGTTTGTTTTATTCAAATAAATCAAACTTTGATCTAGTTGGTTATGCGGATGCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAAGTTATCTATTTACATGTGGAGGAACTGCTATATCTTGGCGGTCTGTAAAGCAAACCATGACGGTCACTTCATCGAATCGTGCAAAAATTCTTGCAATTCATGAAGCTAGTAAAGAATGTGTATCGTTGAGGTCAATGACTCATCATATTCGAGAAACACGTGGTTTGTCTTTCAGTAAAGATTTACCAACAATATTATTTGAATATAATACCACATGA

Protein sequence

MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDIKKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNEVKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRSVKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYNTT

Homology

[Close]

BLAST of Cmc07g0188131 vs. NCBI nr
Match: CAN66208.1 (hypothetical protein VITISV_035070 [Vitis vinifera])

HSP 1 Score: 468.8 bits (1205), Expect = 3.5e-128
Identity = 225/295 (76.27%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1    MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
            MWYNRLSE LLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLK
Sbjct: 1116 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 1175

Query: 61   KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            KEFEMKDLGKTKFCLGLQIEH  NG+ +HQ TY +K+LKRFYMDKAHPL+ PMVVRSLD+
Sbjct: 1176 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 1235

Query: 121  KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
            KK  FRP E +EELLGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT+RHWN 
Sbjct: 1236 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 1295

Query: 181  VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
            +KH+LRYLR T DMSLFYS +S   L+GYADAGYL DPHK RSQT Y+F C GTAISWRS
Sbjct: 1296 IKHILRYLRGTTDMSLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRS 1355

Query: 241  VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
            VKQTM  TSSN  +ILAIHEAS+EC+ LRSM  HIRE+ GLS  K  PT LFE N
Sbjct: 1356 VKQTMVATSSNHLEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDN 1410

[Close]

BLAST of Cmc07g0188131 vs. NCBI nr
Match: RVW99682.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 468.0 bits (1203), Expect = 6.0e-128
Identity = 224/295 (75.93%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLK
Sbjct: 501 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 560

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
           KEFEMKDLGKTKFCLGLQIEH  NG+ +HQ TY +K+LKRFYMDKAHPL+ PMVVRSLD+
Sbjct: 561 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 620

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP E +EELLGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT+RHWN 
Sbjct: 621 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 680

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           +KH+LRYLR T DM LFYS +S   L+GYADAGYL DPHK RSQT Y+F C GTAISWRS
Sbjct: 681 IKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRS 740

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQTM  TSSN ++ILAIHEAS+EC+ LRSM  HIRE+ GLS  K  PT LFE N
Sbjct: 741 VKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDN 795

[Close]

BLAST of Cmc07g0188131 vs. NCBI nr
Match: RVW59049.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 468.0 bits (1203), Expect = 6.0e-128
Identity = 224/295 (75.93%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLK
Sbjct: 702 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 761

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
           KEFEMKDLGKTKFCLGLQIEH  NG+ +HQ TY +K+LKRFYMDKAHPL+ PMVVRSLD+
Sbjct: 762 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 821

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP E +EELLGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT+RHWN 
Sbjct: 822 KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 881

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           +KH+LRYLR T DM LFYS +S   L+GYADAGYL DPHK RSQT Y+F C GTAISWRS
Sbjct: 882 IKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRS 941

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQTM  TSSN ++ILAIHEAS+EC+ LRSM  HIRE+ GLS  K  PT LFE N
Sbjct: 942 VKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDN 996

[Close]

BLAST of Cmc07g0188131 vs. NCBI nr
Match: RVW13569.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 467.2 bits (1201), Expect = 1.0e-127
Identity = 223/295 (75.59%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1    MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
            MWYNRLSE LLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLK
Sbjct: 758  MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 817

Query: 61   KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            KEFEMKDLGKTKFCL LQIEH  NG+ +HQ TY +K+LKRFYMDKAHPL+ PMVVRSLD+
Sbjct: 818  KEFEMKDLGKTKFCLSLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 877

Query: 121  KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
            KK  FRP E +EELLGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT+RHWN 
Sbjct: 878  KKDPFRPCEKDEELLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 937

Query: 181  VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
            +KH+LRYLR T DM LFYS +S   L+GYADAGYL DPHK RSQT Y+F C GTAISWRS
Sbjct: 938  IKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRS 997

Query: 241  VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
            VKQTM  TSSN ++ILAIHEAS+EC+ L+SM  HIRE+ GLS  KD PT LFE N
Sbjct: 998  VKQTMVATSSNHSEILAIHEASRECIWLKSMIQHIRESCGLSSIKDGPTTLFEDN 1052

[Close]

BLAST of Cmc07g0188131 vs. NCBI nr
Match: RVW71587.1 (Copia protein [Vitis vinifera])

HSP 1 Score: 467.2 bits (1201), Expect = 1.0e-127
Identity = 223/295 (75.59%), Postives = 251/295 (85.08%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEGY NNPICPC+FIKKS++GFAIIAVYVDDLN++GTPEEL++   YLK
Sbjct: 453 MWYNRLSEYLLKEGYVNNPICPCIFIKKSETGFAIIAVYVDDLNLVGTPEELTRTTNYLK 512

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
           KEFEMKDLGKTKFCLGLQIEH  NG+ +HQ TY +K+LKRFYMDKAHPL+ PMVVRSLD+
Sbjct: 513 KEFEMKDLGKTKFCLGLQIEHFPNGVLVHQSTYIKKVLKRFYMDKAHPLSSPMVVRSLDV 572

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP E +EELLGPEVPYL+AIGALMYLAN T PDIAF VNL+ARYSS+PT+RHWN 
Sbjct: 573 KKTHFRPCEKDEELLGPEVPYLNAIGALMYLANCTRPDIAFSVNLLARYSSAPTRRHWNG 632

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           +KH+LRYLR T DM LFYS +S   L+GYADAGYL DPHK RSQT Y+F C GTAISWRS
Sbjct: 633 IKHILRYLRGTTDMGLFYSRESKQQLLGYADAGYLSDPHKGRSQTGYVFNCNGTAISWRS 692

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQTM  TSSN ++ILAIHEAS+EC+ LRSM  HIRE+ GLS  K  PT LFE N
Sbjct: 693 VKQTMVATSSNHSEILAIHEASRECIWLRSMIQHIRESCGLSSIKGGPTTLFEDN 747

[Close]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.3e-39
Identity = 101/272 (37.13%), Postives = 146/272 (53.68%), Query Frame = 0


Query: 2    WYNRLSECLLKEGYQNNPICPCVFIKK-SQSGFAIIAVYVDDLNIIGTPEEL-SKAIEYL 61
            WY +    +  + Y      PCV+ K+ S++ F I+ +YVDD+ I+G  + L +K    L
Sbjct: 970  WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1029

Query: 62   KKEFEMKDLGKTKFCLGLQI--EHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRS 121
             K F+MKDLG  +  LG++I  E  +  +++ Q  Y E++L+RF M  A P++ P+    
Sbjct: 1030 SKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHL 1089

Query: 122  LDIKKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRH 181
               KK    P    E+    +VPY SA+G+LMY    T PDIA  V +V+R+  +P K H
Sbjct: 1090 KLSKKMC--PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEH 1149

Query: 182  WNEVKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAIS 241
            W  VK +LRYLR T    L +   S+  L GY DA    D    +S T YLFT  G AIS
Sbjct: 1150 WEAVKWILRYLRGTTGDCLCFGG-SDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1209

Query: 242  WRSVKQTMTVTSSNRAKILAIHEASKECVSLR 270
            W+S  Q     S+  A+ +A  E  KE + L+
Sbjct: 1210 WQSKLQKCVALSTTEAEYIAATETGKEMIWLK 1238

[Close]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 133.7 bits (335), Expect = 3.5e-30
Identity = 84/278 (30.22%), Postives = 139/278 (50.00%), Query Frame = 0


Query: 2    WYNRLSECLLKEGYQNNPICPCVFI--KKSQSGFAIIAVYVDDLNI-IGTPEELSKAIEY 61
            W+    + L +  + N+ +  C++I  K + +    + +YVDD+ I  G    ++    Y
Sbjct: 1048 WFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRY 1107

Query: 62   LKKEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSL 121
            L ++F M DL + K  +G++IE   + I++ Q  Y +KIL +F M+  + ++ P+     
Sbjct: 1108 LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPL----- 1167

Query: 122  DIKKYIFRPREDNEELLGPE----VPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPT 181
                    P + N ELL  +     P  S IG LMY+   T PD+   VN+++RYSS   
Sbjct: 1168 --------PSKINYELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNN 1227

Query: 182  KRHWNEVKHVLRYLRETIDMSLFYSNKSNFD--LVGYADAGYLFDPHKARSQTSYLFTC- 241
               W  +K VLRYL+ TIDM L +     F+  ++GY D+ +       +S T YLF   
Sbjct: 1228 SELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMF 1287

Query: 242  GGTAISWRSVKQTMTVTSSNRAKILAIHEASKECVSLR 270
                I W + +Q     SS  A+ +A+ EA +E + L+
Sbjct: 1288 DFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLK 1312

[Close]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26
Identity = 82/264 (31.06%), Postives = 122/264 (46.21%), Query Frame = 0


Query: 2    WYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSK-AIEYLK 61
            WY  L   LL  G+ N+     +F+ +       + VYVDD+ I G    L K  ++ L 
Sbjct: 1096 WYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALS 1155

Query: 62   KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 121
            + F +K+     + LG++ + +  G+ + Q  YT  +L R  M  A P+  PM   S  +
Sbjct: 1156 QRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMAT-SPKL 1215

Query: 122  KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 181
              +      D  E       Y   +G+L YLA  T PD+++ VN +++Y   PT  HWN 
Sbjct: 1216 TLHSGTKLPDPTE-------YRGIVGSLQYLA-FTRPDLSYAVNRLSQYMHMPTDDHWNA 1275

Query: 182  VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 241
            +K VLRYL  T D  +F    +   L  Y+DA +  D     S   Y+   G   ISW S
Sbjct: 1276 LKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSS 1335

Query: 242  VKQTMTVTSSNRAKILAIHEASKE 265
             KQ   V SS  A+  ++   S E
Sbjct: 1336 KKQKGVVRSSTEAEYRSVANTSSE 1350

[Close]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.5e-23
Identity = 59/142 (41.55%), Postives = 82/142 (57.75%), Query Frame = 0


Query: 139 VPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNEVKHVLRYLRETIDMSLFY 198
           VPYLSA+GA+MYL   T PD+A  V ++++++S P   HW  +K VLRYL+ T    L +
Sbjct: 4   VPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEF 63

Query: 199 SNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRSVKQTMTVTSSNRAKILAI 258
           +      LVGY+DA +  D    RS + YLF   G  +SWRS KQ     SS   + +A+
Sbjct: 64  TRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMAL 123

Query: 259 HEASKECVSLRSMTHHIRETRG 281
            EA++E V L   T   R T+G
Sbjct: 124 SEATQEAVWL---TVRTRRTKG 142

[Close]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.6e-19
Identity = 68/227 (29.96%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 36  IAVYVDDLNIIGTPEE-LSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYT 95
           + +YVDD+ + G+    L+  I  L   F MKDLG   + LG+QI+   +G+F+ Q  Y 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 96  EKILKRFYMDKAHPLNIPMVVR---SLDIKKYIFRPREDNEELLGPEVPYLSAIGALMYL 155
           E+IL    M    P++ P+ ++   S+   KY      D  +       + S +GAL YL
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-----PDPSD-------FRSIVGALQYL 122

Query: 156 ANNTGPDIAFLVNLVARYSSSPTKRHWNEVKHVLRYLRETIDMSLFYSNKSNFDLVGYAD 215
              T PDI++ VN+V +    PT   ++ +K VLRY++ TI   L+    S  ++  + D
Sbjct: 123 -TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 182

Query: 216 AGYLFDPHKARSQTSYLFTCGGTAISWRSVKQTMTVTSSNRAKILAI 259
           + +       RS T +    G   ISW + +Q     SS   +  A+
Sbjct: 183 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216

[Close]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL
Match: A0A2N9FE48 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13021 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.4e-130
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK
Sbjct: 1   MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 60

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            EFEMKDLGKTKFCLGLQIEHL +GI IHQ TYTEK+LK F+MDKAHPL+ PMVVRSLD+
Sbjct: 61  NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 120

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP+E  EE LGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT RHWN 
Sbjct: 121 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 180

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           VKHVLRYLR T DM LFY NKSN  LVGYADAGYL DPHK RSQT YLFTCG TAISWRS
Sbjct: 181 VKHVLRYLRGTTDMGLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGNTAISWRS 240

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQT++ TSSN ++I+AIHEAS+ECV LRS+  HIRE  GLS  KD PTIL+E N
Sbjct: 241 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDN 295

[Close]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL
Match: A0A2N9G6F8 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS22947 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.8e-130
Identity = 230/295 (77.97%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK
Sbjct: 392 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 451

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            EFEMKDLGKTKFCLGLQIEHL +GI IHQ TYTEK+LK F+MDKAHPL+ PMVVRSLD+
Sbjct: 452 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 511

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP+E  EE LGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT RHWN 
Sbjct: 512 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 571

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           VKHVLRYLR T DM LFY NKSN  L+GYADAGYL DPHK RSQT YLFTCG TAISWRS
Sbjct: 572 VKHVLRYLRGTTDMGLFYPNKSNPQLIGYADAGYLSDPHKGRSQTGYLFTCGNTAISWRS 631

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQT++ TSSN ++I+AIHEAS+ECV LRS+  HIRE  GLS  KD PTIL+E N
Sbjct: 632 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDN 686

[Close]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL
Match: A0A2N9G9W6 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24244 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.4e-130
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK
Sbjct: 418 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 477

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            EFEMKDLGKTKFCLGLQIEHL +GI IHQ TYTEK+LK F+MDKAHPL+ PMVVRSLD+
Sbjct: 478 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 537

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP+E  EE LGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT RHWN 
Sbjct: 538 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 597

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           VKHVLRYLR T DM LFY NKSN  LVGYADAGYL DPHK RSQT YLFTCG TAISWRS
Sbjct: 598 VKHVLRYLRGTTDMRLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGDTAISWRS 657

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQT++ TSSN ++I+AIHEAS+ECV LRS+  HIRE  GLS  KD PTIL+E N
Sbjct: 658 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDN 712

[Close]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL
Match: A0A2N9HZE8 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45337 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.4e-130
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK
Sbjct: 418 MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 477

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            EFEMKDLGKTKFCLGLQIEHL +GI IHQ TYTEK+LK F+MDKAHPL+ PMVVRSLD+
Sbjct: 478 NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 537

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP+E  EE LGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT RHWN 
Sbjct: 538 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 597

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           VKHVLRYLR T DM LFY NKSN  LVGYADAGYL DPHK RSQT YLFTCG TAISWRS
Sbjct: 598 VKHVLRYLRGTTDMRLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGDTAISWRS 657

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQT++ TSSN ++I+AIHEAS+ECV LRS+  HIRE  GLS  KD PTIL+E N
Sbjct: 658 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDN 712

[Close]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL
Match: A0A2N9GCM9 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28208 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.4e-130
Identity = 231/295 (78.31%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MWYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPEELSKAIEYLK 60
           MWYNRLSE LLKEG++NNPICPCVFIKKS+SGFAI+AVYVDDLN++GTPEEL+K  +YLK
Sbjct: 1   MWYNRLSEYLLKEGFENNPICPCVFIKKSESGFAIVAVYVDDLNLVGTPEELTKTADYLK 60

Query: 61  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 120
            EFEMKDLGKTKFCLGLQIEHL +GI IHQ TYTEK+LK F+MDKAHPL+ PMVVRSLD+
Sbjct: 61  NEFEMKDLGKTKFCLGLQIEHLPDGILIHQSTYTEKVLKHFHMDKAHPLSTPMVVRSLDV 120

Query: 121 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 180
           KK  FRP+E  EE LGPEVPYLSAIGALMYLAN T PDIAF VNL+ARYSS+PT RHWN 
Sbjct: 121 KKDPFRPQEVGEETLGPEVPYLSAIGALMYLANCTRPDIAFSVNLLARYSSAPTLRHWNG 180

Query: 181 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 240
           VKHVLRYLR T DM LFY NKSN  LVGYADAGYL DPHK RSQT YLFTCG TAISWRS
Sbjct: 181 VKHVLRYLRGTTDMRLFYPNKSNPQLVGYADAGYLSDPHKGRSQTGYLFTCGDTAISWRS 240

Query: 241 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYN 296
           VKQT++ TSSN ++I+AIHEAS+ECV LRS+  HIRE  GLS  KD PTIL+E N
Sbjct: 241 VKQTISATSSNHSEIIAIHEASRECVWLRSVIQHIREKCGLSSIKDNPTILYEDN 295

[Close]

BLAST of Cmc07g0188131 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-25
Identity = 88/296 (29.73%), Postives = 138/296 (46.62%), Query Frame = 0


Query: 2   WYNRLSECLLKEGYQNNPICPCVFIKKSQSGFAIIAVYVDDLNIIGTPE-ELSKAIEYLK 61
           W+ + S  L+  G+  +      F+K + + F  + VYVDD+ I    +  + +    LK
Sbjct: 246 WFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLK 305

Query: 62  KEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYTEKILKRFYMDKAHPLNIPMVVRSLDI 121
             F+++DLG  K+ LGL+I   A GI I Q  Y   +L    +    P ++PM       
Sbjct: 306 SCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM------D 365

Query: 122 KKYIFRPREDNEELLGPEVPYLSAIGALMYLANNTGPDIAFLVNLVARYSSSPTKRHWNE 181
               F      + +      Y   IG LMYL   T  DI+F VN ++++S +P   H   
Sbjct: 366 PSVTFSAHSGGDFV--DAKAYRRLIGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQA 425

Query: 182 VKHVLRYLRETIDMSLFYSNKSNFDLVGYADAGYLFDPHKARSQTSYLFTCGGTAISWRS 241
           V  +L Y++ T+   LFYS+++   L  ++DA +       RS   Y    G + ISW+S
Sbjct: 426 VMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 485

Query: 242 VKQTMTVTSSNRAKILAIHEASKECVSLRSMTHHIRETRGLSFSKDLPTILFEYNT 297
            KQ +   SS  A+  A+  A+ E + L      ++    L  SK  PT+LF  NT
Sbjct: 486 KKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQ----LPLSK--PTLLFCDNT 526

[Close]

BLAST of Cmc07g0188131 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-20
Identity = 68/227 (29.96%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 36  IAVYVDDLNIIGTPEE-LSKAIEYLKKEFEMKDLGKTKFCLGLQIEHLANGIFIHQLTYT 95
           + +YVDD+ + G+    L+  I  L   F MKDLG   + LG+QI+   +G+F+ Q  Y 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 96  EKILKRFYMDKAHPLNIPMVVR---SLDIKKYIFRPREDNEELLGPEVPYLSAIGALMYL 155
           E+IL    M    P++ P+ ++   S+   KY      D  +       + S +GAL YL
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-----PDPSD-------FRSIVGALQYL 122

Query: 156 ANNTGPDIAFLVNLVARYSSSPTKRHWNEVKHVLRYLRETIDMSLFYSNKSNFDLVGYAD 215
              T PDI++ VN+V +    PT   ++ +K VLRY++ TI   L+    S  ++  + D
Sbjct: 123 -TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 182

Query: 216 AGYLFDPHKARSQTSYLFTCGGTAISWRSVKQTMTVTSSNRAKILAI 259
           + +       RS T +    G   ISW + +Q     SS   +  A+
Sbjct: 183 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216

[Close]

BLAST of Cmc07g0188131 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-06
Identity = 28/79 (35.44%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 149 MYLANNTGPDIAFLVNLVARYSSSPTKRHWNEVKHVLRYLRETIDMSLFYSNKSNFDLVG 208
           MYL   T PD+ F VN ++++SS+        V  VL Y++ T+   LFYS  S+  L  
Sbjct: 1   MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60

Query: 209 YADAGYLFDPHKARSQTSY 228
           +AD+ +   P   RS T +
Sbjct: 61  FADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of Cmc07g0188131 vs. NCBI nr


Match Name	E-value	Identity	Description
CAN66208.1	3.5e-128	76.27	hypothetical protein VITISV_035070 [Vitis vinifera]	[more]
RVW99682.1	6.0e-128	75.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW59049.1	6.0e-128	75.93	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW13569.1	1.0e-127	75.59	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]	[more]
RVW71587.1	1.0e-127	75.59	Copia protein [Vitis vinifera]	[more]

BLAST of Cmc07g0188131 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.3e-39	37.13	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.5e-30	30.22	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.8e-26	31.06	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P0CV72	5.5e-23	41.55	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P92519	1.6e-19	29.96	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc07g0188131 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9FE48	1.4e-130	78.31	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9G6F8	1.8e-130	77.97	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9G9W6	2.4e-130	78.31	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9HZE8	2.4e-130	78.31	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]
A0A2N9GCM9	2.4e-130	78.31	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic...	[more]

BLAST of Cmc07g0188131 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.7e-25	29.73	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.2e-20	29.96	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.6e-06	35.44	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..113 e-value: 3.4E-19 score: 69.4
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 116..231
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 116..231
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 207..296 e-value: 6.98316E-19 score: 79.0493
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 31..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0188131.1	Cmc07g0188131.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding