Cmc07g0186431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0186431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ribosomal protein L5
Location	CMiso1.1chr07: 4370957 .. 4371406 (-)
RNA-Seq Expression	Cmc07g0186431
Synteny	Cmc07g0186431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCATATGATTTCAGAACAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGATCAGAAATTGATACAGACAAGGGGTTCGATAGGAAAGTCCTTTCGGTCCAATCCATTCTTTCAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCAGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGAAAACTACATTCAAGACTCTAGGGTTCAATGTGATTATTGTCACTTCGGCCAAGACACAAGAAGAGACTTTACCACCATGGAGCGGATTTTTGAAAAAAAAATTGAATTTGAAAAAAAGAAAAGATTGA

mRNA sequence

ATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCATATGATTTCAGAACAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGATCAGAAATTGATACAGACAAGGGGTTCGATAGGAAAGTCCTTTCGGTCCAATCCATTCTTTCAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCAGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGAAAACTACATTCAAGACTCTAGGGTTCAATGTGATTATTGTCACTTCGGCCAAGACACAAGAAGAGACTTTACCACCATGGAGCGGATTTTTGAAAAAAAAATTGAATTTGAAAAAAAGAAAAGATTGA

Coding sequence (CDS)

ATGGAAGTTCCTGGATCGTCTTCAATAAGAGTCGTGCCAAAGGAACCATATGATTTCAGAACAAAAAATGGAAAATTGGCTATGGAGATTCTGCGCGATCAGAAATTGATACAGACAAGGGGTTCGATAGGAAAGTCCTTTCGGTCCAATCCATTCTTTCAGTCAAATAAAGACAAAGGATATGTCAGTGACCTAGCACGAGAAAGCACTCTCCGAGGGCATGAAATGTCTAATTTTTCTTTCAAAATCATTATAGGAATAGTAATGTCTTTCTTAAATTCTCCAGTCGAAATACGGGAAAACTCCATTCAATTCTCGATGAAAACTACATTCAAGACTCTAGGGTTCAATGTGATTATTGTCACTTCGGCCAAGACACAAGAAGAGACTTTACCACCATGGAGCGGATTTTTGAAAAAAAAATTGAATTTGAAAAAAAGAAAAGATTGA

Protein sequence

MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTFKTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD

Homology

[Close]

BLAST of Cmc07g0186431 vs. NCBI nr
Match: KAA0034876.1 (ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSSSIRVVPKEPYDFR KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 76  MEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 135

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP EIRENS++FSM+T F         
Sbjct: 136 YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELAD 195

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD 150
                 KTLGFNV IVTSAKTQ+ETLPPWSGFLKKK NLKKRKD
Sbjct: 196 HFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD 239

[Close]

BLAST of Cmc07g0186431 vs. NCBI nr
Match: AEN56134.1 (ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5 [Cucumis melo var. momordica])

HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSSSIRVVPKEPYDFR KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP EIRENS++FSM+T F         
Sbjct: 89  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD 150
                 KTLGFNV IVTSAKTQ+ETLPPWSGFLKKK NLKKRKD
Sbjct: 149 HFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD 192

[Close]

BLAST of Cmc07g0186431 vs. NCBI nr
Match: YP_004849341.1 (ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 127/165 (76.97%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSS IRVVPKEPYDFR+KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSEIRVVPKEPYDFRSKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EIR+NSIQF M+T F         
Sbjct: 89  YVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEIRKNSIQFPMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKK--LNLKKRK 149
                  TLGF+V IVTSAKTQ+ETLPPWSGFL+KK  LNLKKRK
Sbjct: 149 HFEIFSNTLGFHVTIVTSAKTQDETLPPWSGFLRKKWNLNLKKRK 193

[Close]

BLAST of Cmc07g0186431 vs. NCBI nr
Match: AAP33159.1 (ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis sativus] >AAP33162.1 ribosomal protein L5 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-55
Identity = 124/165 (75.15%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSS IRVVPKEPYDFR+KNGKLAMEIL  QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSEIRVVPKEPYDFRSKNGKLAMEILCGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EIR+NSIQF M+T F         
Sbjct: 89  YVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEIRKNSIQFPMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKK--LNLKKRK 149
                  TLGF+V IVTSAKTQ+ETL  WSGFL+KK  LNLKKRK
Sbjct: 149 HFEIFSNTLGFHVTIVTSAKTQDETLLLWSGFLRKKWNLNLKKRK 193

[Close]

BLAST of Cmc07g0186431 vs. NCBI nr
Match: YP_009913650.1 (ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa acutangula])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 111/156 (71.15%), Postives = 118/156 (75.64%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNKDK 60
           MEVPGS  IRVVPK PYDF  KNGKLAMEI R QK IQT RGS GKSFRSNPF +SNKDK
Sbjct: 26  MEVPGSCEIRVVPKAPYDFIIKNGKLAMEIPRGQKFIQTQRGSTGKSFRSNPFLESNKDK 85

Query: 61  GYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF-------- 120
           GYVSDLAR+STLRGH MSNFS +  I  VMS L+SPVEIRENSIQFSM+T F        
Sbjct: 86  GYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDSPVEIRENSIQFSMETEFCEFSPELE 145

Query: 121 -------KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                    LGFNV IVTSA TQ+ETLPPWSGFL+K
Sbjct: 146 DHFEIFEHILGFNVTIVTSANTQDETLPPWSGFLQK 179

[Close]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot
Match: P49388 (60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-43
Identity = 101/152 (66.45%), Postives = 109/152 (71.71%), Query Frame = 0


Query: 5   GSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNKDKGYVS 64
           GS  IRVVP  PY+F  KNGKLAMEI R QK IQT RGS GKSFRSNPF  SNKDKGYVS
Sbjct: 30  GSCEIRVVPNGPYNFIIKNGKLAMEIPRGQKFIQTQRGSTGKSFRSNPFLGSNKDKGYVS 89

Query: 65  DLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF------------ 124
           DLAR+STLRGH MSNFS +  I  VMS L+ PVEIR+NSIQFSM+T F            
Sbjct: 90  DLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIRKNSIQFSMETEFCEFAPQLQDHFE 149

Query: 125 ---KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                 GFNV IVTSA TQ+ETLP WSGFL+K
Sbjct: 150 IFEHIRGFNVTIVTSANTQDETLPLWSGFLQK 179

[Close]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot
Match: P42793 (60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.1e-43
Identity = 101/156 (64.74%), Postives = 111/156 (71.15%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNKDK 60
           MEVPG   IRVVPK PY+F  KNGKLAMEI   QK IQT RGS GKSFRSNPF  SNKDK
Sbjct: 26  MEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQKFIQTQRGSTGKSFRSNPFLGSNKDK 85

Query: 61  GYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF-------- 120
           GYVSDLAR+STLRGH MSNF  +I+   VMS L+ PVEIR+NSIQFSM+T F        
Sbjct: 86  GYVSDLARQSTLRGHGMSNFLVRIL--TVMSLLDFPVEIRKNSIQFSMETEFCEFSPELE 145

Query: 121 -------KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                     GFNV I+TSA TQ+ETL  WSGFL+K
Sbjct: 146 DHFEIFEHIRGFNVTIITSANTQDETLLLWSGFLQK 179

[Close]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot
Match: Q05492 (60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-42
Identity = 102/158 (64.56%), Postives = 111/158 (70.25%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPK--EPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNK 60
           MEVPG   IR+VPK    YDF  KNGKLAMEILR QK IQT RGS GKSFRSNPF +SNK
Sbjct: 26  MEVPGLCEIRIVPKTSSTYDFIIKNGKLAMEILRGQKFIQTERGSTGKSFRSNPFLESNK 85

Query: 61  DKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTFKTLG-- 120
           DKGYVSDLAR+S LRGH MSNF  +I+   VMS L+S VEIRENSIQFSM+T F      
Sbjct: 86  DKGYVSDLARQSILRGHGMSNFLVRIL--TVMSLLDSRVEIRENSIQFSMETEFCEFSPE 145

Query: 121 -------------FNVIIVTSAKTQEETLPPWSGFLKK 141
                        FNV IVTSA TQ+ETL  WSGFL+K
Sbjct: 146 LEDHFEIFEHIRRFNVTIVTSANTQDETLLLWSGFLQK 181

[Close]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot
Match: P51409 (60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-35
Identity = 95/156 (60.90%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKD-K 60
           MEVPG   I VVPK       KNGKLAMEI   QKL Q R S GKSFRSNPF  SNKD K
Sbjct: 30  MEVPGLCKIIVVPKTAPSI--KNGKLAMEISCGQKLKQ-RASTGKSFRSNPFLGSNKDKK 89

Query: 61  GYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF-------- 120
           GYVSDLAR+STLRGH MS+F  +  I  VMS L+SP+EIRE SIQFSM+T F        
Sbjct: 90  GYVSDLARQSTLRGHGMSHFLVR--ISTVMSLLDSPLEIRERSIQFSMETEFCEFSPELE 149

Query: 121 -------KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                     GFNV IVTSA TQ+ETL  WSGFL+K
Sbjct: 150 DHFEIFEHIRGFNVTIVTSANTQDETLLLWSGFLQK 180

[Close]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot
Match: P26860 (60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5 PE=3 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 83/162 (51.23%), Postives = 103/162 (63.58%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT--RGSIGKSFRSNPFF---QS 60
           MEVP    I VVPK P +F  KN KLAMEI+  QK IQT  RGS GKSFR N F    +S
Sbjct: 31  MEVPRLCKIIVVPKAPSNF-IKNVKLAMEIVCGQKFIQTRSRGSTGKSFRFNKFVLNQES 90

Query: 61  NKDKGYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTFKTL- 120
            +D GYV+ LAR STLRGH M NF  K++   ++SF + PV+I++NSIQ SM T+   L 
Sbjct: 91  KRDTGYVTYLAR-STLRGHIMYNFLEKLV--TIISFYDYPVKIQKNSIQLSMATSLLRLF 150

Query: 121 --------------GFNVIIVTSAKTQEETLPPWSGFLKKKL 143
                         GF+V IVTSA TQ+ET+  WSGFL+K++
Sbjct: 151 PEIQDHFEIFEHIRGFDVTIVTSANTQDETVILWSGFLQKEV 188

[Close]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL
Match: A0A5A7SYB1 (Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48303G00010 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.9e-66
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSSSIRVVPKEPYDFR KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 76  MEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 135

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP EIRENS++FSM+T F         
Sbjct: 136 YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELAD 195

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD 150
                 KTLGFNV IVTSAKTQ+ETLPPWSGFLKKK NLKKRKD
Sbjct: 196 HFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD 239

[Close]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL
Match: G3EU44 (Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.9e-66
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSSSIRVVPKEPYDFR KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP EIRENS++FSM+T F         
Sbjct: 89  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD 150
                 KTLGFNV IVTSAKTQ+ETLPPWSGFLKKK NLKKRKD
Sbjct: 149 HFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD 192

[Close]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL
Match: A0A3S9JIG3 (Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 7.9e-66
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSSSIRVVPKEPYDFR KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSSIRVVPKEPYDFRRKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSP EIRENS++FSM+T F         
Sbjct: 89  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPAEIRENSMKFSMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKKLNLKKRKD 150
                 KTLGFNV IVTSAKTQ+ETLPPWSGFLKKK NLKKRKD
Sbjct: 149 HFEIFSKTLGFNVTIVTSAKTQDETLPPWSGFLKKKWNLKKRKD 192

[Close]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL
Match: G3EIZ3 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.5e-59
Identity = 127/165 (76.97%), Postives = 136/165 (82.42%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSS IRVVPKEPYDFR+KNGKLAMEILR QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSEIRVVPKEPYDFRSKNGKLAMEILRGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EIR+NSIQF M+T F         
Sbjct: 89  YVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEIRKNSIQFPMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKK--LNLKKRK 149
                  TLGF+V IVTSAKTQ+ETLPPWSGFL+KK  LNLKKRK
Sbjct: 149 HFEIFSNTLGFHVTIVTSAKTQDETLPPWSGFLRKKWNLNLKKRK 193

[Close]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL
Match: Q7Y6H0 (Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.7e-56
Identity = 124/165 (75.15%), Postives = 133/165 (80.61%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQTRGSIGKSFRSNPFFQSNKDKG 60
           MEVPGSS IRVVPKEPYDFR+KNGKLAMEIL  QKLIQTRGS GKSFRSNPF +SNKDKG
Sbjct: 29  MEVPGSSEIRVVPKEPYDFRSKNGKLAMEILCGQKLIQTRGSTGKSFRSNPFLESNKDKG 88

Query: 61  YVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF--------- 120
           YVSDLARESTLRGH M +F FKIIIGIV+SFLNSP EIR+NSIQF M+T F         
Sbjct: 89  YVSDLARESTLRGHSMFHFFFKIIIGIVLSFLNSPGEIRKNSIQFPMETEFFEFFPELAD 148

Query: 121 ------KTLGFNVIIVTSAKTQEETLPPWSGFLKKK--LNLKKRK 149
                  TLGF+V IVTSAKTQ+ETL  WSGFL+KK  LNLKKRK
Sbjct: 149 HFEIFSNTLGFHVTIVTSAKTQDETLLLWSGFLRKKWNLNLKKRK 193

[Close]

BLAST of Cmc07g0186431 vs. TAIR 10
Match: AT2G07725.1 (Ribosomal L5P family protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 105/156 (67.31%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNKDK 60
           MEVPGS  IRVVPK PY+F  KNGKLAMEI R QK IQT RGS GKSFRSNPF  SNKDK
Sbjct: 26  MEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQTQRGSTGKSFRSNPFLGSNKDK 85

Query: 61  GYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF-------- 120
           GYVSDLAR+STLRGH MSNFS +  I  VMS L+ PVEIR+NSIQFSM+T F        
Sbjct: 86  GYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELE 145

Query: 121 -------KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                     GFNV I+TSA TQ+ETLP WSGFL+K
Sbjct: 146 DHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQK 179

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BLAST of Cmc07g0186431 vs. TAIR 10
Match: ATMG00210.1 (ribosomal protein L5 )

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-47
Identity = 105/156 (67.31%), Postives = 114/156 (73.08%), Query Frame = 0


Query: 1   MEVPGSSSIRVVPKEPYDFRTKNGKLAMEILRDQKLIQT-RGSIGKSFRSNPFFQSNKDK 60
           MEVPGS  IRVVPK PY+F  KNGKLAMEI R QK IQT RGS GKSFRSNPF  SNKDK
Sbjct: 26  MEVPGSCEIRVVPKAPYNFIIKNGKLAMEIPRGQKFIQTQRGSTGKSFRSNPFLGSNKDK 85

Query: 61  GYVSDLARESTLRGHEMSNFSFKIIIGIVMSFLNSPVEIRENSIQFSMKTTF-------- 120
           GYVSDLAR+STLRGH MSNFS +  I  VMS L+ PVEIR+NSIQFSM+T F        
Sbjct: 86  GYVSDLARQSTLRGHGMSNFSVR--ISTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELE 145

Query: 121 -------KTLGFNVIIVTSAKTQEETLPPWSGFLKK 141
                     GFNV I+TSA TQ+ETLP WSGFL+K
Sbjct: 146 DHFEIFEHIRGFNVTIITSANTQDETLPLWSGFLQK 179

The following BLAST results are available for this feature:

BLAST of Cmc07g0186431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034876.1	1.6e-65	82.93	ribosomal protein L5 [Cucumis melo var. makuwa]	[more]
AEN56134.1	1.6e-65	82.93	ribosomal protein L5 [Cucumis melo subsp. melo] >AZP40310.1 ribosomal protein L5...	[more]
YP_004849341.1	1.1e-58	76.97	ribosomal protein L5 [Cucumis sativus] >ADZ10768.1 ribosomal protein L5 [Cucumis...	[more]
AAP33159.1	2.0e-55	75.15	ribosomal protein L5 [Cucumis sativus] >AAP33161.1 ribosomal protein L5 [Cucumis...	[more]
YP_009913650.1	1.2e-47	71.15	ribosomal protein L5 [Luffa acutangula] >QLJ93020.1 ribosomal protein L5 [Luffa ...	[more]

BLAST of Cmc07g0186431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49388	2.4e-43	66.45	60S ribosomal protein L5, mitochondrial OS=Brassica napus OX=3708 GN=RPL5 PE=3 S...	[more]
P42793	4.1e-43	64.74	60S ribosomal protein L5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPL5 ...	[more]
Q05492	2.6e-42	64.56	60S ribosomal protein L5, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPL5 ...	[more]
P51409	9.1e-35	60.90	60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum OX=4113 GN=RPL5 PE=...	[more]
P26860	4.1e-27	51.23	60S ribosomal protein L5, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPL5...	[more]

BLAST of Cmc07g0186431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SYB1	7.9e-66	82.93	Ribosomal protein L5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
G3EU44	7.9e-66	82.93	Ribosomal protein L5 OS=Cucumis melo subsp. melo OX=412675 GN=rpl5 PE=3 SV=1	[more]
A0A3S9JIG3	7.9e-66	82.93	Ribosomal protein L5 OS=Cucumis melo var. momordica OX=2034244 GN=rpl5 PE=3 SV=1	[more]
G3EIZ3	5.5e-59	76.97	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]
Q7Y6H0	9.7e-56	75.15	Ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=rpl5 PE=3 SV=1	[more]

BLAST of Cmc07g0186431 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07725.1	1.6e-47	67.31	Ribosomal L5P family protein	[more]
ATMG00210.1	1.6e-47	67.31	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022803	Ribosomal protein L5 domain superfamily	GENE3D	3.30.1440.10		coord: 1..140 e-value: 1.0E-5 score: 27.1
IPR022803	Ribosomal protein L5 domain superfamily	SUPERFAMILY	55282	RL5-like	coord: 1..138
None	No IPR available	PANTHER	PTHR11994:SF11	60S RIBOSOMAL PROTEIN L5, MITOCHONDRIAL	coord: 115..141 coord: 2..112
IPR002132	Ribosomal protein L5	PANTHER	PTHR11994	60S RIBOSOMAL PROTEIN L11-RELATED	coord: 115..141 coord: 2..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0186431.1	Cmc07g0186431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome