Cmc07g0186241 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0186241
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	PRA1 family protein
Location	CMiso1.1chr07: 4196269 .. 4199029 (+)
RNA-Seq Expression	Cmc07g0186241
Synteny	Cmc07g0186241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGAAAAAAAAACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGCTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCATCTCGACAACAAAACAAACACAACAATCTCAAATCAACAATCTTCAATCACAAGGCAATTACATTCAGCCTTTTTATATAACCCTTTTGTCTCTTTTGATTCTGAATTCGTTTTTGTTGTGTTGTGTTGTTGCGATTAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTATGTTCTTCTCTTTCTCTTGTTAATTGTGTCTATTGATGGGCTGTTCGCTGCGGATTCTGGCTTGACGTTGAAGTTGTTGTATTTCCTGGAGGTTGTGAATTGGGTTCTGTTTGGTTTTACTTGATGTGGATGGGAAGAGTACGAGTACATCCATTTGTTTAGCGTTTTGATTAAGTTATGAGGATGGGTTTAGTGATTTGGTTTGATTTTTGAAGCTTGTGGGGCTTAAAACTTTTGGAGCCTAATCGATTGCTGATCCCAATGTGAAACATATAGAAAGAATCGCTTGCATTCCTTTTGTGGATTTAAATGGTTTGACTGAACAGGGAACCACTGTTATTGTTGTTGGCGATTAAACTAGAACACTACTCTATTTATATATTCGTGTTCCTTTATCTGGGATGAATGAGCGTTTGCATGGAAATAAAAGATGTTGGCTAGAGATTTGTGACCTTTATTTTACCAATTTCTTAACTTTGAACTCTCGTGTGGATGATTGCAGGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGGTATGTTACTGACGTTTTAAAACCGTGTTTATTTACACACCTGAGAGGTTCCTCCCAATTGTTTCCTTTAAGCATGTATTAATTAATTGGTATTCTGTTTCATTGTGGCATTTTCACATAGAGAACTTCGGTTGAAAAATGATATTGGTATAGATACAGATCACTATAGCATAGATCATCAGTGTAGATGTAGAGTTTAGGTCTCAAATTGAAAGCATACCAACACATTCGATTTTTCTTTCTTTCTTTTTTTACTAGCTTTTTTTATGCGGTCAGTGAGATATACACTGTAGTTCCTGCTTGTTGAATGGTTATTGTTTTGCATGTTCCATTTGGTTACAGATTTCAAGCCTTAAGGCTATTGTTTTCTCAATTTGAGATGACTTTGGATTGATAACTTTTGCGTAGTTGTCCTTAGTTCTTGTAATGGAGCCAAGCTAATAAGTTGACCAAGTGTGTAGCAAAGCCTAATTCCTGCCTGTTTGATGCTGGAAAAGTTTTACTTGGTACTACAAATGCCTTTTGGAATCTTTGGAATTTTTCAAAACCCTTCTTTTTGAGACAACTCTTTGGGATTATTGGACTTCAAAATTCGGATCCTGCTGTATGCATTTATTCGTTGTTTTCATGTAAATTACCATCCGTGAGTTCTGTTTGGACTGCTGTTATTTAATTACATAGCATCTTAAATACATAACAAGTATAATGTTTTGCAGCGACTGCTATCATCCTTCTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTGACTTCAGAATTCTAGGCCATGTTATAGAGTTCATTATCATTAGTTGTTCTTATCACCTTTGAAATCTTGGCAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAAACTGTTACAGGCAATTGTATTCGTCCTCCTATACATAAGTTATGTTCAAGCAAGCCTAATGCAAGGTACCAACATCTGATTCAAAGACGAAAAGTTCTGGTAATGCTGATCGCAGACTTGAAAGCATGACTGATGTACCTCAGCAGTCACCGTGCCCTTGCTTGAAAATTCATATTATGGTGTGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTTTGTTAGAGGCTAGAAACAAGTAGCAAGTCAAGCTCAAATCTCGTTTAGTACTTTGTTCATTAGTTAATGAAATTAAGTATGGTTATTTTGTACTACTACACGATACTTAGTTCCAGCTTATGATTTGTACCACAAATTTAGCATCTTGTGCTTTACATTTTCTATTAACGAGAGTTTATCAGATTTCAGATGAAGTACAGAAAGCTCTAATTTTTCTCGTCTAACAATAAGAAGCCTGCATCAATCCTTATCCATTCTGT

mRNA sequence

GGGGAAAAAAAAACTTTTTTGGGTCAAAAGAACCCAATTTCCCGGAGTCCGGGGCCCGCCGGGATCGTTAACGGTGGCGCTGATGATTTGATTGGCGAGAAGGAGGATAAAGCGATGTACCCACCTTCATCTCGACAACAAAACAAACACAACAATCTCAAATCAACAATCTTCAATCACAAGGAATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGCGACTGCTATCATCCTTCTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAAACTGTTACAGGCAATTGTATTCGTCCTCCTATACATAAGTTATGTTCAAGCAAGCCTAATGCAAGGTACCAACATCTGATTCAAAGACGAAAAGTTCTGGTAATGCTGATCGCAGACTTGAAAGCATGACTGATGTACCTCAGCAGTCACCGTGCCCTTGCTTGAAAATTCATATTATGGTGTGGGCACGGTGACCATCGTATTGCCCAAGAGTTTCATCTTCCTTTGTTAGAGGCTAGAAACAAGTAGCAAGTCAAGCTCAAATCTCGTTTAGTACTTTGTTCATTAGTTAATGAAATTAAGTATGGTTATTTTGTACTACTACACGATACTTAGTTCCAGCTTATGATTTGTACCACAAATTTAGCATCTTGTGCTTTACATTTTCTATTAACGAGAGTTTATCAGATTTCAGATGAAGTACAGAAAGCTCTAATTTTTCTCGTCTAACAATAAGAAGCCTGCATCAATCCTTATCCATTCTGT

Coding sequence (CDS)

ATGAGTTTCTCATCCAACCCACTTTCCCTCAGCGTTCCAGACGCCGCTTTCGATTCATGGCTTCGCGATTCCGGTTACCTTGAAATTCTCGATCAGCGGACCTCTGACCTCCACCGTCATTCCTCTGCCGCTCCCCCCACCAGACCCACCCCTACCGCTGCAGCTCCTTTAGCCACAGGTTTCTTCATCTCCCTCTTCTCTCGCATCGCGACCCTTCTCTCCATTTTTACTCTAAACCCATTTTCCAAGCTCTCTGCTGCTGATTTTTCTGGCCCGACTCCTTCCTGGACTTCTGGGTTTGTTGGGTTTTTTGAGTCCTACTCATTTCCTTCGTCGCCGGCTCAAGCTCGTCTTAGAGTCCACGAGAACGCCAAACGCTATGCTCGCAATTACGCTTCACTATTTGTTCTCTTCTTTGTCTGCACGCTGTACCAGATGCCTCTTGCCCTCCTTGGACTGATATCATGTTTAGCACTTTGGGATATTGTTAAATTTTGTTGTGATAGGTGGGGATTAGACAAATATCCTGTTCTTTGGCAGTGTTTGGTTCGCATTGCTCAATGTGCGACTGCTATCATCCTTCTATTTTCCAACTTTCAAATGGCAATCTTCTGTGCCCTTGGCATTGGATATACAGGTATGATTTTGCATGCTGCATTTCGGAAGCTGACTCCCACCAAGCCCCCATCTACCATAAGTCGAAAATAA

Protein sequence

MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK

Homology

[Close]

BLAST of Cmc07g0186241 vs. NCBI nr
Match: XP_008463685.1 (PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 family protein H [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 6.2e-128
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]

BLAST of Cmc07g0186241 vs. NCBI nr
Match: XP_004146052.1 (PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [Cucumis sativus] >KGN55111.1 hypothetical protein Csa_012113 [Cucumis sativus])

HSP 1 Score: 458.8 bits (1179), Expect = 2.9e-125
Identity = 229/235 (97.45%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]

BLAST of Cmc07g0186241 vs. NCBI nr
Match: KAA0066819.1 (PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein H [Cucumis melo var. makuwa])

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122
Identity = 234/272 (86.03%), Postives = 235/272 (86.40%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCT-------------------------------------L 180
           HENAKRYARNYASLFVLFFVCT                                     L
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 236
           YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

[Close]

BLAST of Cmc07g0186241 vs. NCBI nr
Match: XP_038898448.1 (PRA1 family protein H [Benincasa hispida])

HSP 1 Score: 434.5 bits (1116), Expect = 5.9e-118
Identity = 220/238 (92.44%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60
           MSFS NPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AA PTRPTP AAAPL
Sbjct: 1   MSFSPNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAPAAAAPTRPTPAAAAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFISLFSR+ TLLSIFTLNPF+KLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISLFSRMGTLLSIFTLNPFAKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWD+VKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDVVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           LWQCLVRIAQC T IILLF NFQMAIFCALGIGYTGMILHAAFRKLT TKPP+ +SRK
Sbjct: 181 LWQCLVRIAQCVTVIILLFCNFQMAIFCALGIGYTGMILHAAFRKLTLTKPPAAVSRK 238

[Close]

BLAST of Cmc07g0186241 vs. NCBI nr
Match: KAG6591944.1 (PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024817.1 PRA1 family protein H [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 432.6 bits (1111), Expect = 2.2e-117
Identity = 217/238 (91.18%), Postives = 226/238 (94.96%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   AA PTRPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAAAAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDKYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of Cmc07g0186241 vs. ExPASy Swiss-Prot
Match: Q8LFP1 (PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-71
Identity = 138/238 (57.98%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPTRPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPS 231
           D++P + +  + I QCATA++L F N QMA+F AL I Y+ MILHA FRKLTP+K P+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPT 238

[Close]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL
Match: A0A1S3CLE4 (PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.0e-128
Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK
Sbjct: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 235

[Close]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL
Match: A0A0A0L4P4 (PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.4e-125
Identity = 229/235 (97.45%), Postives = 232/235 (98.72%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPP RPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLSIFTLNPF+KLSAADFSGPTPSWT+GFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180
           HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQ 180

Query: 181 CLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           CLVRIAQCAT IILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKP ST+SRK
Sbjct: 181 CLVRIAQCATVIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPTSTVSRK 235

[Close]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL
Match: A0A5A7VNH6 (PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001700 PE=3 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 234/272 (86.03%), Postives = 235/272 (86.40%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPTRPTPTAAAPLATG 60

Query: 61  FFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120
           FFISLFSRIATLLS+FTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV
Sbjct: 61  FFISLFSRIATLLSVFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQARLRV 120

Query: 121 HENAKRYARNYASLFVLFFVCT-------------------------------------L 180
           HENAKRYARNYASLFVLFFVCT                                     L
Sbjct: 121 HENAKRYARNYASLFVLFFVCTLYVLLFLLLIVSIDGLFAADSGLTLKLLYFLEVVNWVL 180

Query: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 236
           YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI
Sbjct: 181 YQMPLALLGLISCLALWDIVKFCCDRWGLDKYPVLWQCLVRIAQCATAIILLFSNFQMAI 240

[Close]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL
Match: A0A6J1IMK5 (PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 3.1e-117
Identity = 216/238 (90.76%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   A  PTRPTPTA APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPTAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRW LDKYPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWALDKYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL
Match: A0A6J1F5I6 (PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 9.1e-117
Identity = 215/238 (90.34%), Postives = 225/238 (94.54%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS---AAPPTRPTPTAAAPL 60
           MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSS   A  PTRPTP A APL
Sbjct: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSATAATAPTRPTPIAVAPL 60

Query: 61  ATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSSPAQAR 120
           ATGFFIS FSRI TLLS+FTLNPF+KLSAADF+GPTPSWTSGFVGFFESYSFPSSPAQAR
Sbjct: 61  ATGFFISFFSRIGTLLSVFTLNPFAKLSAADFAGPTPSWTSGFVGFFESYSFPSSPAQAR 120

Query: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGLDKYPV 180
           LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGL+SCLALWDIVKFC DRWGLD+YPV
Sbjct: 121 LRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLVSCLALWDIVKFCGDRWGLDQYPV 180

Query: 181 LWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPSTISRK 236
           +WQCLVRIAQC T IILLFSNFQMAIFCALG+GYTGMILHAAFRKLT T+PPS+I+RK
Sbjct: 181 VWQCLVRIAQCVTVIILLFSNFQMAIFCALGVGYTGMILHAAFRKLTLTRPPSSINRK 238

[Close]

BLAST of Cmc07g0186241 vs. TAIR 10
Match: AT4G27540.1 (prenylated RAB acceptor 1.H )

HSP 1 Score: 271.2 bits (692), Expect = 8.0e-73
Identity = 138/238 (57.98%), Postives = 174/238 (73.11%), Query Frame = 0


Query: 1   MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRT--------SDLHRHSSAAPPTRPTPT 60
           M+FS NPLSLSVPD AF+SWLRDSGYLE+LD RT        S     SSAA  +  +  
Sbjct: 1   MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60

Query: 61  AAAPLATGFFISLFSRIATLLSIFTLNPFSKLSAADFSGPTPSWTSGFVGFFESYSFPSS 120
             + +  GFF SL SR+ T+ S+ T+NPFSKLSA DFSG T  WT+GF+G  +SYSFPSS
Sbjct: 61  VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTPWTTGFIGNCDSYSFPSS 120

Query: 121 PAQARLRVHENAKRYARNYASLFVLFFVCTLYQMPLALLGLISCLALWDIVKFCCDRWGL 180
             QAR+RVHEN KR+ARNYA+LF++FF C LYQMPLAL+GL+  LALW++ K+C D+W  
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACALYQMPLALVGLLGSLALWELFKYCSDKWKF 180

Query: 181 DKYPVLWQCLVRIAQCATAIILLFSNFQMAIFCALGIGYTGMILHAAFRKLTPTKPPS 231
           D++P + +  + I QCATA++L F N QMA+F AL I Y+ MILHA FRKLTP+K P+
Sbjct: 181 DRHPSMRKLSIGIGQCATAVLLTFLNVQMALFSALAISYSVMILHAGFRKLTPSKKPT 238

The following BLAST results are available for this feature:

BLAST of Cmc07g0186241 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463685.1	6.2e-128	99.57	PREDICTED: PRA1 family protein H [Cucumis melo] >XP_008463686.1 PREDICTED: PRA1 ...	[more]
XP_004146052.1	2.9e-125	97.45	PRA1 family protein H [Cucumis sativus] >XP_004146053.1 PRA1 family protein H [C...	[more]
KAA0066819.1	2.3e-122	86.03	PRA1 family protein H [Cucumis melo var. makuwa] >TYK27966.1 PRA1 family protein...	[more]
XP_038898448.1	5.9e-118	92.44	PRA1 family protein H [Benincasa hispida]	[more]
KAG6591944.1	2.2e-117	91.18	PRA1 family protein H, partial [Cucurbita argyrosperma subsp. sororia] >KAG70248...	[more]

BLAST of Cmc07g0186241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFP1	1.1e-71	57.98	PRA1 family protein H OS=Arabidopsis thaliana OX=3702 GN=PRA1H PE=2 SV=1	[more]

BLAST of Cmc07g0186241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLE4	3.0e-128	99.57	PRA1 family protein OS=Cucumis melo OX=3656 GN=LOC103501773 PE=3 SV=1	[more]
A0A0A0L4P4	1.4e-125	97.45	PRA1 family protein OS=Cucumis sativus OX=3659 GN=Csa_4G630550 PE=3 SV=1	[more]
A0A5A7VNH6	1.1e-122	86.03	PRA1 family protein H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold38...	[more]
A0A6J1IMK5	3.1e-117	90.76	PRA1 family protein OS=Cucurbita maxima OX=3661 GN=LOC111476927 PE=3 SV=1	[more]
A0A6J1F5I6	9.1e-117	90.34	PRA1 family protein OS=Cucurbita moschata OX=3662 GN=LOC111442551 PE=3 SV=1	[more]

BLAST of Cmc07g0186241 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27540.1	8.0e-73	57.98	prenylated RAB acceptor 1.H	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 103..222 e-value: 1.8E-14 score: 53.6
IPR004895	Prenylated rab acceptor PRA1	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..229
None	No IPR available	PANTHER	PTHR19317:SF1	PRA1 FAMILY PROTEIN H	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0186241.1	Cmc07g0186241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016020	membrane