Cmc07g0186091 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0186091
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Nucleic acid-binding, OB-fold containing protein
Location	CMiso1.1chr07: 4086954 .. 4088878 (-)
RNA-Seq Expression	Cmc07g0186091
Synteny	Cmc07g0186091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAATGTCACAAAAAAAAAAAAGCCAAAGAGGAAGAAAGAACAAAGAATGAAGTGAAGAGATGCTATTGCTATATATATAAACGCCACTCTCCTAAATTCTCACAATTCACAGCGCCACACACACAAACCTAAATCCATCGAGAAAGAAGACAACTTTCGGTCCATTTTCACGGATTCGGATTCAGCTTTCGCATCAATGGCGACAGGGAAATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAACCCGGTACCAATGGTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTGCCTTGTTGGCGACGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGGTATGGATTTTTTAATCTTCCATTTGCTTCTGTTTGGTTTCGGGGGAATTGGGGAAAATTAGGTTTTTTTTTTAATCGTAGCTGGGGGGGATAAATCATTGATTTTTTAGGTTGGGGTATTTGAATTATGTACCCTTTAGCAATTAGAACTTGCCATTTTAATGCACTATTAAACCGATGTTTGACACAAAGATATAACATGAATTCTGAGATGGATTTTGGAGAATGACGTAGTTCTTGCTGATGTGCTTAAGGAAACTTGGACGTAGAAATAAGAGGCATTTGTTTTATGAATTGCATAAAGAAGCATTGATTTTGCTCTAATCTGAACTGGATGCGGATTTAGAAATTTACTGTCTTGCACTAGGATTTGTGTTGGGTTATGCATGGCTATGAATAGTCTAATTCCTGTGGTTTCATGATCTTTATTCATACGCCGAGCTTGTCTCGAATTGGAACATTATTTTTTTTTAATACTAACTGTATGCTAATGCCCCAAGGGATGGCCCCTTTGGGAAGGGCTTGTGTCTCTTGGTTATAAAGATTCCAATTTTTTTTCCTTCGAGTGAGCTTAATACCAAAAAGTCTTGATGTCTCCAAGGTCCAAACCTCAGGGGCGGGTGCAGGGTGGCCTTGGGTATAGCGAAGAAAGATCCGATGGATATGATGATGATTTTAACTGAAACTGAAAGTTTGATGTTAACTCCTCACAAATACATAGCCTTGGGTCTGTGGACTGTTGCCACTTGAGTTTTTAGCCTTGAAGTGGAGTTCTTGTAAACAACGAGAATGGGATATTGATATGCACTGGACCAATTTTCATGGTTACCAATACTTGGAAAGCATAATTAATTTAATCTTTTGTTTTTTTGGTACCTCAGCATTTAAACTTCTCAAAAGTTTTGAATGGGTTATTTTGTTTCCTCAGTTGATCAATTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATGTTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTTGCAGAGGAATGAGAAGGTACTACTGAATGCCAACTTTAAGACAATGGGTTGAGATGGCTGGTCAGTGAGTTTCCTGGTAATCTGCAGATGTGAATATATAACAACGCTATATTATAATTTTGTGTGGGTGAAGTATTTAAGCGAACAATCCCTTGATTTCTTCTAAAGCTCTATTCCGTCGGTTTGACTTACACAAAGCCATGTTTTGTCGGGTAAAGGTATAAATAGGTACTAGTTTGGTACTTGTTATAACTCTGGAAATGTAATAGAGCGTTAACGACGGCAAAGAATGCTTTTGGTATGCCTTTGATATCATATCTAACATGCAAAGTTTTCAATTTGCTG

mRNA sequence

GAAAAATGTCACAAAAAAAAAAAAGCCAAAGAGGAAGAAAGAACAAAGAATGAAGTGAAGAGATGCTATTGCTATATATATAAACGCCACTCTCCTAAATTCTCACAATTCACAGCGCCACACACACAAACCTAAATCCATCGAGAAAGAAGACAACTTTCGGTCCATTTTCACGGATTCGGATTCAGCTTTCGCATCAATGGCGACAGGGAAATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAACCCGGTACCAATGGTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTGCCTTGTTGGCGACGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAATTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATGTTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTTGCAGAGGAATGAGAAGGTACTACTGAATGCCAACTTTAAGACAATGGGTTGAGATGGCTGGTCAGTGAGTTTCCTGGTAATCTGCAGATGTGAATATATAACAACGCTATATTATAATTTTGTGTGGGTGAAGTATTTAAGCGAACAATCCCTTGATTTCTTCTAAAGCTCTATTCCGTCGGTTTGACTTACACAAAGCCATGTTTTGTCGGGTAAAGGTATAAATAGGTACTAGTTTGGTACTTGTTATAACTCTGGAAATGTAATAGAGCGTTAACGACGGCAAAGAATGCTTTTGGTATGCCTTTGATATCATATCTAACATGCAAAGTTTTCAATTTGCTG

Coding sequence (CDS)

ATGGCGACAGGGAAATCACCTACGCCGGCATCGCAGGAGCTGCAGCAGACCAATGCAGCGGCTAGACCTGGCCTGAGGAAGCCAGTCTTTGTTAAGATCGAACAGCTCAAACCCGGTACCAATGGTCACACACTCATCGTCAAGGTTGTTAGCTCCAATACCGTGTTGCAGAAGGGTCGATCCGTGTCTCAGCACCTTCGGCAGACGCGGATCGCTGAGTGCCTTGTTGGCGACGAAACTGGAACCATTTTGTTCACTGCGCGTAATGATCAAGTTGATCAATTAAAACCTGGGACAACTATCATTCTTCGAAATGCAAAGATCGACATGTTCAAAGGGTCTATGAGGCTAGCAGTTGATAAATGGGGCCGCATTGAGATTGCCGATCCTGAAGATTTTGTCGTCAAGGAAGACAATAATCTATCTTTAGTCGAGTATGAACTTGTGAATGTTGCAGAGGAATGA

Protein sequence

MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE

Homology

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BLAST of Cmc07g0186091 vs. NCBI nr
Match: XP_008463705.1 (PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo] >KAA0066804.1 Nucleic acid-binding [Cucumis melo var. makuwa] >TYK27951.1 Nucleic acid-binding [Cucumis melo var. makuwa])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

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BLAST of Cmc07g0186091 vs. NCBI nr
Match: XP_004146043.1 (uncharacterized protein At4g28440 [Cucumis sativus] >KGN55099.1 hypothetical protein Csa_012716 [Cucumis sativus])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ADPEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELADPEDFVVKEDNNLSLVEYELVNVAEE 154

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BLAST of Cmc07g0186091 vs. NCBI nr
Match: XP_038899654.1 (uncharacterized protein At4g28440-like [Benincasa hispida])

HSP 1 Score: 295.8 bits (756), Expect = 2.1e-76
Identity = 150/154 (97.40%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQ+NAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQSNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+A+PEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELAEPEDFVVKEDNNLSLVEYELVNVAEE 154

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BLAST of Cmc07g0186091 vs. NCBI nr
Match: XP_022139613.1 (uncharacterized protein At4g28440-like [Momordica charantia])

HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69
Identity = 137/154 (88.96%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGR
Sbjct: 1   MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTIL TARNDQVD +KP TTII+RNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE 154

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BLAST of Cmc07g0186091 vs. NCBI nr
Match: XP_023535412.1 (uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.5 bits (667), Expect = 4.5e-66
Identity = 135/154 (87.66%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATEKSPTPAS----------RSGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECL+GDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLIGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ +PE+FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEVVEPENFVVKEDNNLSLVEYELVNVAEE 144

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BLAST of Cmc07g0186091 vs. ExPASy Swiss-Prot
Match: O49453 (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 5.0e-44
Identity = 89/132 (67.42%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 26  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR------SVSQHLRQTRIAECLVGDE 85
           RKPVFVK+EQLKPGT GHTL VKV+ +N V+   R      S+S+  + +RI ECL+GDE
Sbjct: 18  RKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPSRIVECLIGDE 77

Query: 86  TGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDN 145
           TG ILFTARNDQVD +KPG T+ILRN++IDMFKG+MRL VDKWGRIE      F VKEDN
Sbjct: 78  TGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATGAASFTVKEDN 137

Query: 146 NLSLVEYELVNV 152
           NLSLVEYEL+NV
Sbjct: 138 NLSLVEYELINV 149

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BLAST of Cmc07g0186091 vs. ExPASy TrEMBL
Match: A0A5D3DWE0 (Nucleic acid-binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001550 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.1e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Cmc07g0186091 vs. ExPASy TrEMBL
Match: A0A1S3CKC4 (uncharacterized protein At4g28440-like OS=Cucumis melo OX=3656 GN=LOC103501787 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.1e-78
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Cmc07g0186091 vs. ExPASy TrEMBL
Match: A0A0A0L242 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629450 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 151/154 (98.05%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPASQELQQTNAA RPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATGKSPTPASQELQQTNAAPRPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ADPEDFVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELADPEDFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Cmc07g0186091 vs. ExPASy TrEMBL
Match: A0A6J1CG19 (uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC111010472 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.2e-69
Identity = 137/154 (88.96%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MATGKSPTPAS E+QQ+NA ARPGLRKPVFVK+EQLKPGTNGHTL VKVV+SNTVLQKGR
Sbjct: 1   MATGKSPTPASPEVQQSNAEARPGLRKPVFVKVEQLKPGTNGHTLTVKVVTSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECLVGDETGTIL TARNDQVD +KP TTII+RNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLVGDETGTILLTARNDQVDLVKPETTIIIRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ +P +FVVKEDNNLSLVEYELVNVAEE
Sbjct: 121 KWGRIELTEPANFVVKEDNNLSLVEYELVNVAEE 154

[Close]

BLAST of Cmc07g0186091 vs. ExPASy TrEMBL
Match: A0A6J1FBC1 (uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC111442557 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.8e-66
Identity = 134/154 (87.01%), Postives = 141/154 (91.56%), Query Frame = 0


Query: 1   MATGKSPTPASQELQQTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGR 60
           MAT KSPTPAS          R GLRKPVFVK+EQLKPGTNGHTLIVKVVSSNTVLQKGR
Sbjct: 1   MATEKSPTPAS----------RSGLRKPVFVKVEQLKPGTNGHTLIVKVVSSNTVLQKGR 60

Query: 61  SVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVD 120
           SVSQHLRQTRIAECL+GDETGTILFTARNDQVDQ+KPGTTIILRNAKIDMFKGSMRLAVD
Sbjct: 61  SVSQHLRQTRIAECLIGDETGTILFTARNDQVDQVKPGTTIILRNAKIDMFKGSMRLAVD 120

Query: 121 KWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           KWGRIE+ +PE+FVVKEDNNLSL+EYELVNVAEE
Sbjct: 121 KWGRIEVVEPENFVVKEDNNLSLIEYELVNVAEE 144

[Close]

BLAST of Cmc07g0186091 vs. TAIR 10
Match: AT2G33845.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 194.9 bits (494), Expect = 4.8e-50
Identity = 103/156 (66.03%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 4   GKSPTPASQELQ----QTNAAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK- 63
           G++P P S   +    Q         +KPVFVK++QLKPGT+GHTL VKVV  N+V QK 
Sbjct: 27  GRNPPPPSSSTRTSQNQPPQHTPQEKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVPQKP 86

Query: 64  GRSVSQHLRQTRIAECLVGDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLA 123
           G + S HLR  RI+ECLVGDET  ILFTARNDQV+ +KPG T+ LRNAKIDMFKGSMRLA
Sbjct: 87  GAASSSHLRPARISECLVGDETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLA 146

Query: 124 VDKWGRIEIADPEDFVVKEDNNLSLVEYELVNVAEE 155
           VDKWGRIE  +P D  VKEDNNLSLVEYELVNV EE
Sbjct: 147 VDKWGRIEATEPADITVKEDNNLSLVEYELVNVVEE 182

[Close]

BLAST of Cmc07g0186091 vs. TAIR 10
Match: AT1G23750.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 189.5 bits (480), Expect = 2.0e-48
Identity = 87/134 (64.93%), Postives = 110/134 (82.09%), Query Frame = 0


Query: 20  AARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLRQTRIAECLVGDE 79
           + + GL+KP F K++QL+PGT+GH + VK+VS+  VLQKGR+     RQ RI+EC+VGDE
Sbjct: 4   STKAGLKKPAFTKVDQLRPGTSGHNVNVKIVSTKMVLQKGRADGPQARQLRISECIVGDE 63

Query: 80  TGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIADPEDFVVKEDN 139
           TG I+FTARNDQVD +K G+T+ LRNAKIDM+KGSMRLAVDKWGR+E+ +P  F VKED 
Sbjct: 64  TGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDT 123

Query: 140 NLSLVEYELVNVAE 154
           N+SL+EYELVNV E
Sbjct: 124 NMSLIEYELVNVVE 137

[Close]

BLAST of Cmc07g0186091 vs. TAIR 10
Match: AT1G10590.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 89/136 (65.44%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 19  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLV 78
           A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLV
Sbjct: 2   AEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLV 61

Query: 79  GDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIA-DPEDFVV 138
           GDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMRLAVD+WGR+E+A +P D  V
Sbjct: 62  GDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITV 121

Query: 139 KEDNNLSLVEYELVNV 152
           K+DNNLSL+EYELV+V
Sbjct: 122 KDDNNLSLIEYELVSV 137

[Close]

BLAST of Cmc07g0186091 vs. TAIR 10
Match: AT1G10590.3 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 89/136 (65.44%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 19  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLV 78
           A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLV
Sbjct: 16  AEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLV 75

Query: 79  GDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIA-DPEDFVV 138
           GDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMRLAVD+WGR+E+A +P D  V
Sbjct: 76  GDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITV 135

Query: 139 KEDNNLSLVEYELVNV 152
           K+DNNLSL+EYELV+V
Sbjct: 136 KDDNNLSLIEYELVSV 151

[Close]

BLAST of Cmc07g0186091 vs. TAIR 10
Match: AT1G10590.2 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-45
Identity = 89/136 (65.44%), Postives = 110/136 (80.88%), Query Frame = 0


Query: 19  AAARPGLRKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQK--GRSVSQHLRQTRIAECLV 78
           A A   LRKPVF K+ +L+PGTNGH+L VKVV++  V+Q+  GR +    RQ RIAECLV
Sbjct: 2   AEATSALRKPVFTKVNELRPGTNGHSLNVKVVNTKMVMQRGGGRPMGPQSRQMRIAECLV 61

Query: 79  GDETGTILFTARNDQVDQLKPGTTIILRNAKIDMFKGSMRLAVDKWGRIEIA-DPEDFVV 138
           GDETG I+FTARNDQVD +K G+ + LRNAKIDM+KGSMRLAVD+WGR+E+A +P D  V
Sbjct: 62  GDETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITV 121

Query: 139 KEDNNLSLVEYELVNV 152
           K+DNNLSL+EYELV+V
Sbjct: 122 KDDNNLSLIEYELVSV 137

The following BLAST results are available for this feature:

BLAST of Cmc07g0186091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463705.1	1.5e-77	99.35	PREDICTED: uncharacterized protein At4g28440-like [Cucumis melo] >KAA0066804.1 N...	[more]
XP_004146043.1	9.6e-77	98.05	uncharacterized protein At4g28440 [Cucumis sativus] >KGN55099.1 hypothetical pro...	[more]
XP_038899654.1	2.1e-76	97.40	uncharacterized protein At4g28440-like [Benincasa hispida]	[more]
XP_022139613.1	2.5e-69	88.96	uncharacterized protein At4g28440-like [Momordica charantia]	[more]
XP_023535412.1	4.5e-66	87.66	uncharacterized protein At4g28440-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc07g0186091 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49453	5.0e-44	67.42	Uncharacterized protein At4g28440 OS=Arabidopsis thaliana OX=3702 GN=At4g28440 P...	[more]

BLAST of Cmc07g0186091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DWE0	7.1e-78	99.35	Nucleic acid-binding OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384...	[more]
A0A1S3CKC4	7.1e-78	99.35	uncharacterized protein At4g28440-like OS=Cucumis melo OX=3656 GN=LOC103501787 P...	[more]
A0A0A0L242	4.6e-77	98.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629450 PE=4 SV=1	[more]
A0A6J1CG19	1.2e-69	88.96	uncharacterized protein At4g28440-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1FBC1	2.8e-66	87.01	uncharacterized protein At4g28440-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of Cmc07g0186091 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33845.1	4.8e-50	66.03	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G23750.1	2.0e-48	64.93	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.1	1.2e-45	65.44	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.3	1.2e-45	65.44	Nucleic acid-binding, OB-fold-like protein	[more]
AT1G10590.2	1.2e-45	65.44	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 40..143 e-value: 3.9E-44 score: 151.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR31472	OS05G0244600 PROTEIN	coord: 9..154
None	No IPR available	PANTHER	PTHR31472:SF26	SUBFAMILY NOT NAMED	coord: 9..154
None	No IPR available	CDD	cd04491	SoSSB_OBF	coord: 44..127 e-value: 8.07307E-19 score: 73.8113
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 22..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0186091.1	Cmc07g0186091.1	mRNA