Cmc07g0186001 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0186001
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RNA exonuclease 4
Location	CMiso1.1chr07: 3910225 .. 3913695 (-)
RNA-Seq Expression	Cmc07g0186001
Synteny	Cmc07g0186001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCCTCTCCTTCCTTTCACTGTTTCCCGGTTTAGGGCCACCGGGAGAGAAGACGACCGAAGCGGCGGCTACTATTAACATGTAAATTGTGGGAGTCGGACGTTAAAGTGGGAGCTTCAACATTATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAGTACTTCTTCTTCTTCTTCCCTCCATTCCTCGTTTTCCCTTCTCTTTCCATCACTGATTTCTATCTATTTTTATCCTGCAGAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTACTGTCCCGAAATCCGAAGCTTCATCAAAGACCCTTTTAGGTAAGAGTTCTTCTTCTACCCCTCGGCTCAAAGTTGCTTCCCATTTAGAGCATTATGAACCTTCATGCTCATGTTCGATGAACTCTGTCTTACCTATTATCCTTAATTCTATGCGATTGTATGAGCCTCACTAGTTCAAACAAAGAAATTGAGAAGTGGGTTTTGCAGCAATCGTCGCTTGAGATAGTGTGCTTTTGATTTTTGGAACTTGGGTTTTCTTATTATTTTATTTGGAAGTTCTTAGTTCACTAAATATTTAGAATAACTAAACAAGTTCTTCTTTCGGTTACATTCTGATGAATCCACGTAGTTTTTGTTGTCATAACGTAGTGATTTAGTTAACTAGGGCGACATGGGTTTACAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATGACTTTAGGTAATCTTTTAGAATTATTTTTTCTTACTTGAAGAACATTGTAAATTGTTGACCACTTACTTTAGATGCAAATTGAAAATATTTCTAATTGTATTACATAATCACCAACGACTGGAGTGGTATTGATAAATGCTTAATGATAATTCAATCCTCGATTATCATAAGTAGCAAGTTCATGTGACTAAATTATGCTATAAAATTATGATTGGACTTGGAATTAGACATATCAAGTTCTTTGTATGGATTCTAATCCTGTAGTATTGGCAAATGGCAAATTGTGAAATACATTGTAGTACATCTTCTCATAGTTCAAAGTTTTAACTTTTAAGTTCCTCACTTCTCCCAAAAAAAAAAAAAAAAGAACAAGAAGAAGAGAGAAAGAAAGAGAAAAGCTCGAAGTTACTCGGTTCCCTGCTTTTGTAATCTTTGCCAAACATCGGATTTTATGCTCAGTTTCAAGATAGTACTGACTTTATACTTTTGCCAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTATTCATTCCTTTTTGAATTTGATCGCCTGTTATTCGTGTCCATGTATCTGGTTTTTTTGCATACACATGGAGAGAGAGCCTCTTTACATCCTCCTTCAATCAGGAAAGAGGATGGTTATTATTATTGTTATTTTTATTTTATTTTTTTGGAGGGGTTGATAGTTCAACTTGCATTCTGATAAGTAGCAGCTTCTTAGAGCAACAAAGCATGACATTTAACTTTTCTATACTATTAGTTGCTAACAGTACTGGCTATTAATGGCAGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGGTCGCATTTGTTTTCCTTCTTTCTTTTAATATGTATATTTTGTTGTTTGCTCTGCTGTTTCCTTAAAGAGTTTAATGATGTTGAAGACTCTAATTTCTAGCTATGTACGATCATACCATTATATCTGTTAGAAAATGAATGCTTTGCACTAATATGCAAGTGGAATTTTGAGTCGGTCGATTAATGATGGTCTGGGATTTGAATTTTTGAGGTTTTTGCTCCCAGTCAGTCTTTCATCCTTCGATTTCCAGTTAGGATTTATATTCGTTACGTTAATTTAGGTTTCATATATGTGATTAACTTATTGATTTAATTTTTTAATTTCAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGTATCTAAATTAAAATGGTTTGAAGTATAAACCTGAAAAGTTATATTCAAGTTCTCTATTGATTTGACAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGTAATAATTTTGCTCCCCATTGTACTTTATAACTTCCACCTTTTAAGTTCTACTTTGAAATTCATCCATTCTCAATTGTTTGATTAAACAGGGAAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAAGTTCTCTGATTTTTTCGTAGTCTCTTTTGTTAAACTGGAGAGAAATCGGGGTATTGATTATAAAGCCACTTGGGTTGACCTAATGGTCAATAAGGGTCATGAAAATAATAAAGGGACTTAAATAGAGTGGTTTCAAGCCATTTTAATTTATATTCTATGTGAATAACCTAATATTATAGAGTTGAGAGTTCAACACTTATCTCTCGATAGACTGACATAAACTTGAAAGTTTAAGGATTAAACTTGTAATTTAACCAAAAAAAATTCTACCCCTGATATTTTATGGTAATTACATCTTACAAGGGTCCCACTTAACCACCATGTTACAACTTCCAAGAGTCCTACTTTACAACCATGTTACTTGGATTCATCCTGAGATTCATGATCTCCCATCTTGGTGGAAATTAAGTACCTTATCTTACCTCAATTTGCAAATTCTGGGAATCCATATATGTCATTCTGGCTTCCTCTATTACTATCTATGCCAACGGCTTGCAATGAATTTATTCATCTGGTTTCTAATACTATTGATATGTTTTCATGGGACATTTTGTTTTGATAAATCTGTGAAATTTGGATGCAACTTTCTTTTGTAGGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGATCAATCAGACTCCTAATAGCTTAATCCGACTTTAATCTTACAAAAATGTGTAACATGTTAGTATAGAACTTAGAATGAGTATTTATTACGGAGATTTGAAACCATGAGTTCCATTCTTTATTATGAGTGAAACTATTGGCCTGTGATATTGGCCAAATTTTGATCTTCGGCCTCGAAAAGAATTATTGGATATTGATGTTGAAGTGAATAATATTGTGCTAATGTTGTGATTTTAAGTTTAAAAGTGAATAATATAGTTAG

mRNA sequence

CCCTCCTCTCCTTCCTTTCACTGTTTCCCGGTTTAGGGCCACCGGGAGAGAAGACGACCGAAGCGGCGGCTACTATTAACATGTAAATTGTGGGAGTCGGACGTTAAAGTGGGAGCTTCAACATTATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTACTGTCCCGAAATCCGAAGCTTCATCAAAGACCCTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGATCAATCAGACTCCTAATAGCTTAATCCGACTTTAATCTTACAAAAATGTGTAACATGTTAGTATAGAACTTAGAATGAGTATTTATTACGGAGATTTGAAACCATGAGTTCCATTCTTTATTATGAGTGAAACTATTGGCCTGTGATATTGGCCAAATTTTGATCTTCGGCCTCGAAAAGAATTATTGGATATTGATGTTGAAGTGAATAATATTGTGCTAATGTTGTGATTTTAAGTTTAAAAGTGAATAATATAGTTAG

Coding sequence (CDS)

ATGACATCTCAGCTCAAGAAGAACCCTAAACCCAAATTACTCAACCCCAATTGGGCAATACTCCAACAAAAGCTGAAACCCCATGGTTCAAATCATTCAAAGGCCTCTACTGTCCCGAAATCCGAAGCTTCATCAAAGACCCTTTTAGGGAAACGCAAGGAAAGATCTGATGTGGAGTCAAATCATTCCCAGAAGAATATCCTCATTCCGGTGAATGATGACTTTAGTCTTACAGATGAAGTAGCTATGGATTGTGAAATGGTTGGAGTAGGTCAAGGTAACAAAAGTGCCCTTGGACGTGTTACACTGGTAAACAAATGGGGGAATGTTATATACGATGAGTTTGTACGCCCGATAGAGCGTGTGGTTGACTTTCGGACCCAAATTAGTGGCATAAGACCCTGCGACTTGAAGAAAGCTAAGGATTTTCCAACTGTCCAGAAGAGAGTGGCAGAGTTGATTAAAGGAAAGATTCTTGTTGGCCATGCCTTGCGTAATGATCTTAAGGCATTACTCTTGAGTCATCCCAAGAATGACGTGAGAGACACCTCCGAGTACCAATTCTTTCAGAAGGAAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGAGTTTCTTGGTGTTCAGATCCAAAATGGGGAGCACTGTCCTGTAGAAGATGCTCGTTCTGCCATGCTGCTCTATCAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAAGCTGAACAAAAGCTTAAATTGAAGCAGAAAAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGAGGTTTTGAATGA

Protein sequence

MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE

Homology

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BLAST of Cmc07g0186001 vs. NCBI nr
Match: XP_008463709.1 (PREDICTED: RNA exonuclease 4 [Cucumis melo] >ADN33800.1 RNA exonuclease [Cucumis melo subsp. melo])

HSP 1 Score: 518.1 bits (1333), Expect = 4.5e-143
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AEQKLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of Cmc07g0186001 vs. NCBI nr
Match: XP_004146040.1 (RNA exonuclease 4 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 2.4e-136
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNHS--NTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AEQKLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 263

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BLAST of Cmc07g0186001 vs. NCBI nr
Match: KAE8649831.1 (hypothetical protein Csa_012901 [Cucumis sativus])

HSP 1 Score: 489.2 bits (1258), Expect = 2.3e-134
Identity = 252/262 (96.18%), Postives = 256/262 (97.71%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNHS--NTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGG 263
           AEQKLKLKQKKRKPRKKSKDGG
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGG 260

[Close]

BLAST of Cmc07g0186001 vs. NCBI nr
Match: XP_038897122.1 (RNA exonuclease 4 isoform X3 [Benincasa hispida])

HSP 1 Score: 480.7 bits (1236), Expect = 8.0e-132
Identity = 249/265 (93.96%), Postives = 254/265 (95.85%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           M SQLKK  KPKLLNPNWA+LQQKLKP GSNHS++STVPKSEASSKTLLGKRKERSDVES
Sbjct: 1   MESQLKKTSKPKLLNPNWALLQQKLKPLGSNHSRSSTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTQISGIRPSDLKKAKDFSTVQKRVAELIKGKILVGHALRNDLKALLLSHPKQDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGC+RALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCRRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
            E KLKLKQKKRK RKKSKDGGGFE
Sbjct: 241 GEIKLKLKQKKRKRRKKSKDGGGFE 265

[Close]

BLAST of Cmc07g0186001 vs. NCBI nr
Match: XP_038897121.1 (RNA exonuclease 4 isoform X2 [Benincasa hispida])

HSP 1 Score: 473.8 bits (1218), Expect = 9.8e-130
Identity = 249/272 (91.54%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQ-------KLKPHGSNHSKASTVPKSEASSKTLLGKRK 60
           M SQLKK  KPKLLNPNWA+LQQ       KLKP GSNHS++STVPKSEASSKTLLGKRK
Sbjct: 1   MESQLKKTSKPKLLNPNWALLQQVLLVVVVKLKPLGSNHSRSSTVPKSEASSKTLLGKRK 60

Query: 61  ERSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYD 120
           ERSDVESNHSQKNILIPVNDDFSLTD VAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYD
Sbjct: 61  ERSDVESNHSQKNILIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYD 120

Query: 121 EFVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLL 180
           EFVRPIERVVDFRTQISGIRP DLKKAKDF TVQKRVAELIKGKILVGHALRNDLKALLL
Sbjct: 121 EFVRPIERVVDFRTQISGIRPSDLKKAKDFSTVQKRVAELIKGKILVGHALRNDLKALLL 180

Query: 181 SHPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRK 240
           SHPK DVRDTSEYQFFQKEGC+RALRHLAAEFLGV+IQNGEHCPVEDARSAMLLYQKKRK
Sbjct: 181 SHPKQDVRDTSEYQFFQKEGCRRALRHLAAEFLGVEIQNGEHCPVEDARSAMLLYQKKRK 240

Query: 241 EWEKSVKAEQKLKLKQKKRKPRKKSKDGGGFE 266
           EWEKSVK E KLKLKQKKRK RKKSKDGGGFE
Sbjct: 241 EWEKSVKGEIKLKLKQKKRKRRKKSKDGGGFE 272

[Close]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot
Match: Q9GZR2 (RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2)

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-42
Identity = 85/172 (49.42%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP 
Sbjct: 240 LTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 299

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFF--QKEG 196
           +LK+ ++   VQK VAE++KG+ILVGHAL NDLK L L HPK  +RDT +Y+ F  Q + 
Sbjct: 300 NLKQGEELEVVQKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKYKPFKSQVKS 359

Query: 197 CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKL 246
            + +LR L+ + LG+Q+Q  EHC ++DA++AM LY   +KEWE   +  + L
Sbjct: 360 GRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLYVMVKKEWESMARDRRPL 411

[Close]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot
Match: Q91560 (RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2)

HSP 1 Score: 174.1 bits (440), Expect = 2.1e-42
Identity = 89/185 (48.11%), Postives = 132/185 (71.35%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++V+P ERV D+RT +SGIRP 
Sbjct: 231 LTRTVAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPE 290

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK--EG 196
           D+KK + F  VQK V+E+++G+ LVGHA+ NDLK L L HPK  +RDT +Y+ F++  + 
Sbjct: 291 DVKKGEPFKVVQKEVSEILRGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVKS 350

Query: 197 CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQK--LKLKQKK 256
            + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+    + + +K 
Sbjct: 351 GRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLYTMEKKSWEVAIKAKYTGVMPVDRKS 410

[Close]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot
Match: Q6PAQ4 (RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.6e-42
Identity = 80/165 (48.48%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  +A+DCEMVGVG +G +S   RV++VN++G  +YD++V+P E V D+RT +SGIRP 
Sbjct: 250 LTKALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPE 309

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK--EG 196
           +LK+ ++F  V+K VAE++KG+ILVGHAL NDLK L L HPK  +RDT +++ F+   + 
Sbjct: 310 NLKQGEEFEVVKKEVAEMLKGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRVKS 369

Query: 197 CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKS 239
            + +L+ L+ + LG+++Q  EHC ++DA++AM LY   ++EWE S
Sbjct: 370 GRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKREWESS 414

[Close]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot
Match: Q6DEW6 (RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-41
Identity = 89/183 (48.63%), Postives = 127/183 (69.40%), Query Frame = 0


Query: 77  LTDEVAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPC 136
           LT  VAMDCEMVGVG  G +S L RV++VN +G  +YD++VRP ERV D+RT +SGIRP 
Sbjct: 225 LTRTVAMDCEMVGVGLDGEESMLARVSIVNLFGKCVYDKYVRPTERVTDYRTAVSGIRPD 284

Query: 137 DLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK--EG 196
           D+K  + F  VQ  VAE+++G+ LVGHA+ NDLK L L HPK  +RDT +Y+ F++  + 
Sbjct: 285 DIKNGEAFKDVQAEVAEILRGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKEKVKS 344

Query: 197 CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRK 256
            + +L+ L  + L V++Q GEHC V+DA++AM LY  ++K WE ++KA+       K + 
Sbjct: 345 GRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLYTMEKKCWEAAIKAKYAGVTAAKAKG 404

[Close]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot
Match: Q08237 (RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=REX4 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.0e-40
Identity = 84/161 (52.17%), Postives = 123/161 (76.40%), Query Frame = 0


Query: 81  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           +AMDCE VGVG +G +SAL R+++VN +G+V+ DEFV+P E+VV++RT +SGI+P  +K 
Sbjct: 122 IAMDCEFVGVGPEGKESALARISIVNYFGHVVLDEFVKPREKVVEWRTWVSGIKPEHMKN 181

Query: 141 AKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK---EGCKR 200
           A  F   QK+ A++++G+ILVGHAL++DL+AL+LSHPK+ +RDTS +  F+K   +G   
Sbjct: 182 AITFKEAQKKTADILEGRILVGHALKHDLEALMLSHPKSLLRDTSRHLPFRKLYAKGKTP 241

Query: 201 ALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK 238
           +L+ L  E L + IQ GEH  VEDAR+ MLLY+K++ E+EK
Sbjct: 242 SLKKLTREVLKISIQEGEHSSVEDARATMLLYKKEKTEFEK 282

[Close]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL
Match: E5GBF8 (RNA exonuclease 4 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AEQKLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL
Match: A0A1S3CJW0 (RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103501792 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.2e-143
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES
Sbjct: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AEQKLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 265

[Close]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL
Match: A0A0A0KZK3 (RNA exonuclease 4 OS=Cucumis sativus OX=3659 GN=Csa_4G628920 PE=3 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 255/265 (96.23%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           M SQLKKNPKPKLLNPNWA+LQQKL PHGSNHS  +TV KSEASSKTLLGKRKERSDVES
Sbjct: 1   MKSQLKKNPKPKLLNPNWALLQQKLNPHGSNHS--NTVLKSEASSKTLLGKRKERSDVES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE
Sbjct: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGK+LVGHALRNDLKALLLSHPKNDV
Sbjct: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKLLVGHALRNDLKALLLSHPKNDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQKEGCKRALRHLAAEFL V+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK
Sbjct: 181 RDTSEYQFFQKEGCKRALRHLAAEFLSVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AEQKLKLKQKKRKPRKKSKDGGGFE
Sbjct: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 263

[Close]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL
Match: A0A5A7VEJ2 (RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001270 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.1e-129
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 24  KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM 83
           KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM
Sbjct: 6   KLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVESNHSQKNILIPVNDDFSLTDEVAM 65

Query: 84  DCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF 143
           DCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF
Sbjct: 66  DCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKKAKDF 125

Query: 144 PTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAA 203
           PTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAA
Sbjct: 126 PTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQKEGCKRALRHLAA 185

Query: 204 EFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGG 263
           EFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGG
Sbjct: 186 EFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKAEQKLKLKQKKRKPRKKSKDGGG 245

Query: 264 FE 266
           FE
Sbjct: 246 FE 247

[Close]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL
Match: A0A6J1FBB2 (RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111442550 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.9e-125
Identity = 235/265 (88.68%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MTSQLKKNPKPKLLNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKERSDVES 60
           M SQLKK+ KPKLLNPNWA+LQQKL PHGS  S  S+VPKSEASSKTLLGKRK+RSD ES
Sbjct: 1   MESQLKKSAKPKLLNPNWALLQQKLNPHGSKRS--SSVPKSEASSKTLLGKRKDRSDEES 60

Query: 61  NHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIE 120
           +HS K +LIPVNDDFSLTD VAMDCEMVGVGQGNKSALGRVT+VNKWGNVIYDEFVRPIE
Sbjct: 61  DHSNKKLLIPVNDDFSLTDVVAMDCEMVGVGQGNKSALGRVTVVNKWGNVIYDEFVRPIE 120

Query: 121 RVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLSHPKNDV 180
           RVVDFRT+ISGIRPCDL+KAKDFPTVQKRVAELIKG+ILVGHALRNDLKALLLSHPK DV
Sbjct: 121 RVVDFRTEISGIRPCDLRKAKDFPTVQKRVAELIKGRILVGHALRNDLKALLLSHPKKDV 180

Query: 181 RDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK 240
           RDTSEYQFFQ+ GC+RALRHLAAE LGV+IQNGEHCPVEDARSAMLLYQKK KEWEKSVK
Sbjct: 181 RDTSEYQFFQRGGCRRALRHLAAEVLGVEIQNGEHCPVEDARSAMLLYQKKSKEWEKSVK 240

Query: 241 AEQKLKLKQKKRKPRKKSKDGGGFE 266
           AE KLKLKQKKRKPRKKSKDGGG E
Sbjct: 241 AEVKLKLKQKKRKPRKKSKDGGGVE 263

[Close]

BLAST of Cmc07g0186001 vs. TAIR 10
Match: AT3G15080.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 337.8 bits (865), Expect = 7.8e-93
Identity = 177/267 (66.29%), Postives = 213/267 (79.78%), Query Frame = 0


Query: 1   MTSQLKKNPKPKL------LNPNWAILQQKLKPHGSNHSKASTVPKSEASSKTLLGKRKE 60
           M+S LK+ PK K+      LNPNW++LQQKLK     +++ S+ P++ +S   +LGKRKE
Sbjct: 1   MSSDLKRKPKKKITPKPVQLNPNWSLLQQKLKSDSHGNTRKSSNPENPSS---ILGKRKE 60

Query: 61  RSDVESNHSQKNILIPVNDDFSLTDEVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDE 120
           R D E +  + N L PVNDD SLTDEVAMDCEMVGV QG KSALGRVTLVNKWGNV+YDE
Sbjct: 61  RPDSEVDVPKINPLAPVNDDSSLTDEVAMDCEMVGVSQGTKSALGRVTLVNKWGNVLYDE 120

Query: 121 FVRPIERVVDFRTQISGIRPCDLKKAKDFPTVQKRVAELIKGKILVGHALRNDLKALLLS 180
           FVRP+E VVDFRT ISGIRP DL+KAKDF   Q +VAELIKGKILVGHAL NDLKALLL+
Sbjct: 121 FVRPVEHVVDFRTSISGIRPRDLRKAKDFRVAQTKVAELIKGKILVGHALHNDLKALLLT 180

Query: 181 HPKNDVRDTSEYQFFQKEGCKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKE 240
           HPK D+RDT EYQ F K   +++L+HLA+E LG  IQNGEHCP++DAR+AM+LYQK RKE
Sbjct: 181 HPKKDIRDTGEYQPFLKGKTRKSLKHLASEILGADIQNGEHCPIDDARAAMMLYQKNRKE 240

Query: 241 WEKSVKAEQKLKLKQKKRKPRKKSKDG 262
           WEK+VK + ++ LKQKKRKP+KK+K G
Sbjct: 241 WEKTVKDQTRMWLKQKKRKPKKKAKYG 264

[Close]

BLAST of Cmc07g0186001 vs. TAIR 10
Match: AT2G48100.1 (Exonuclease family protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-20
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 81  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK 
Sbjct: 133 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 192

Query: 141 AKDFPTVQKRVAELIKG--------KILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK 200
                 V++RV   + G         +LVGH LR+D+  L L +P + +RDT++Y    K
Sbjct: 193 GMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMK 252

Query: 201 EG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE 243
                ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Sbjct: 253 TNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEHVCSGKAE 305

[Close]

BLAST of Cmc07g0186001 vs. TAIR 10
Match: AT2G48100.2 (Exonuclease family protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-20
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 81  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK 
Sbjct: 133 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 192

Query: 141 AKDFPTVQKRVAELIKG--------KILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK 200
                 V++RV   + G         +LVGH LR+D+  L L +P + +RDT++Y    K
Sbjct: 193 GMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMK 252

Query: 201 EG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE 243
                ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Sbjct: 253 TNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEHVCSGKAE 305

[Close]

BLAST of Cmc07g0186001 vs. TAIR 10
Match: AT2G48100.3 (Exonuclease family protein )

HSP 1 Score: 95.1 bits (235), Expect = 8.9e-20
Identity = 65/173 (37.57%), Postives = 96/173 (55.49%), Query Frame = 0


Query: 81  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           +A+DCEMVG G  G       V LV+   NVI+   V+P+  V D+R +I+G+   DLK 
Sbjct: 133 MALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKD 192

Query: 141 AKDFPTVQKRVAELIKG--------KILVGHALRNDLKALLLSHPKNDVRDTSEYQFFQK 200
                 V++RV   + G         +LVGH LR+D+  L L +P + +RDT++Y    K
Sbjct: 193 GMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMK 252

Query: 201 EG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKR-KEWEKSVKAE 243
                ++L++L   +LG +IQ G+H   ED  SAM LY++ R +E   S KAE
Sbjct: 253 TNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEHVCSGKAE 305

[Close]

BLAST of Cmc07g0186001 vs. TAIR 10
Match: AT3G27970.1 (Exonuclease family protein )

HSP 1 Score: 92.0 bits (227), Expect = 7.5e-19
Identity = 56/173 (32.37%), Postives = 89/173 (51.45%), Query Frame = 0


Query: 81  VAMDCEMVGVG-QGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTQISGIRPCDLKK 140
           VA+ C+MVG G  G+     RV + ++  NVI+  +V+P   V  +R + +GIRP +L+ 
Sbjct: 136 VALSCKMVGGGSDGSLDLCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRD 195

Query: 141 AKDFPTVQKRVAELI--------------KGKILVGHALRNDLKALLLSHPKNDVRDTSE 200
           A     VQ+++ E +              K +ILVGH L +DL  L L +P + +RDT++
Sbjct: 196 AMPLKQVQRKIQEFLCNGEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAK 255

Query: 201 YQFFQKEG-CKRALRHLAAEFLGVQIQNGEHCPVEDARSAMLLYQKKRKEWEK 238
           Y    K      +L++L   +LG  +  G   P ED  + M LY + R +  K
Sbjct: 256 YPPLMKTSKLSNSLKYLTQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKHK 308

The following BLAST results are available for this feature:

BLAST of Cmc07g0186001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463709.1	4.5e-143	100.00	PREDICTED: RNA exonuclease 4 [Cucumis melo] >ADN33800.1 RNA exonuclease [Cucumis...	[more]
XP_004146040.1	2.4e-136	96.23	RNA exonuclease 4 [Cucumis sativus]	[more]
KAE8649831.1	2.3e-134	96.18	hypothetical protein Csa_012901 [Cucumis sativus]	[more]
XP_038897122.1	8.0e-132	93.96	RNA exonuclease 4 isoform X3 [Benincasa hispida]	[more]
XP_038897121.1	9.8e-130	91.54	RNA exonuclease 4 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc07g0186001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9GZR2	1.6e-42	49.42	RNA exonuclease 4 OS=Homo sapiens OX=9606 GN=REXO4 PE=1 SV=2	[more]
Q91560	2.1e-42	48.11	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2	[more]
Q6PAQ4	3.6e-42	48.48	RNA exonuclease 4 OS=Mus musculus OX=10090 GN=Rexo4 PE=2 SV=2	[more]
Q6DEW6	1.4e-41	48.63	RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1	[more]
Q08237	2.0e-40	52.17	RNA exonuclease 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=55...	[more]

BLAST of Cmc07g0186001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GBF8	2.2e-143	100.00	RNA exonuclease 4 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3CJW0	2.2e-143	100.00	RNA exonuclease 4 OS=Cucumis melo OX=3656 GN=LOC103501792 PE=3 SV=1	[more]
A0A0A0KZK3	1.2e-136	96.23	RNA exonuclease 4 OS=Cucumis sativus OX=3659 GN=Csa_4G628920 PE=3 SV=1	[more]
A0A5A7VEJ2	1.1e-129	100.00	RNA exonuclease 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00...	[more]
A0A6J1FBB2	7.9e-125	88.68	RNA exonuclease 4 OS=Cucurbita moschata OX=3662 GN=LOC111442550 PE=3 SV=1	[more]

BLAST of Cmc07g0186001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15080.1	7.8e-93	66.29	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G48100.1	8.9e-20	37.57	Exonuclease family protein	[more]
AT2G48100.2	8.9e-20	37.57	Exonuclease family protein	[more]
AT2G48100.3	8.9e-20	37.57	Exonuclease family protein	[more]
AT3G27970.1	7.5e-19	32.37	Exonuclease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 79..237 e-value: 2.4E-38 score: 143.4
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 81..228 e-value: 1.2E-14 score: 55.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 78..255 e-value: 4.3E-56 score: 191.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..61
None	No IPR available	PANTHER	PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	coord: 41..256
None	No IPR available	PANTHER	PTHR12801:SF135	RNA EXONUCLEASE 4	coord: 41..256
IPR037431	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	CDD	cd06144	REX4_like	coord: 81..229 e-value: 1.01295E-91 score: 265.919
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 81..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0186001.1	Cmc07g0186001.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008408	3'-5' exonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity