Cmc07g0185421 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0185421
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr07: 3498296 .. 3499261 (+)
RNA-Seq Expression	Cmc07g0185421
Synteny	Cmc07g0185421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGAGATTCCAAGACTATACGATAGAACATGGAATCCAATCTCAACTCTCAGAACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACTCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCAAAGAGTGTTTCTGAAACACCTTTCAAGTTATGGAAAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAAAACACATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAAGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCAAAAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATTATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGCTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACTGCCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTATCATAACCTAACCGTTATTTGGGTTTAACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAACGACCAATGGGTCAAAGCCATGAACCTTGAAATGGAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTACATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCGAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCTCCGTTGCTATCTTAA

mRNA sequence

ATGGATTTGAGATTCCAAGACTATACGATAGAACATGGAATCCAATCTCAACTCTCAGAACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACTCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCAAAGAGTGTTTCTGAAACACCTTTCAAGTTATGGAAAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAAAACACATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAAGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCAAAAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATTATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGCTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACTGCCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAACGACCAATGGGTCAAAGCCATGAACCTTGAAATGGAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTACATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCGAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCTCCGTTGCTATCTTAA

Coding sequence (CDS)

ATGGATTTGAGATTCCAAGACTATACGATAGAACATGGAATCCAATCTCAACTCTCAGAACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACCTTGTTAGACATGGTTCGTTCAATGATGAGTTACTCTCAATTGCCTAGCTCGTTTTGGGGGTATGCAGTAGAGACTGCAGTTCATATCTTGAACAATGTTCCCTCAAAGAGTGTTTCTGAAACACCTTTCAAGTTATGGAAAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAAAACACATGTTAGTGACAAATCCCAAGAAGTTGGAACCTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAAGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGTTTGTATCAAAAAATGCTACTTTCTTGGAAGAAGACCACATGAGAGATTATAAACCACGAAGCAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGCTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACTGCCACATCAGGTCAATCTCATCCTTCTCAATCGTTGAGAATGCCTCGACGCAGTGGGAGGGTTGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCCTATAAACAGGCAATGAATGATGTAGATAACGACCAATGGGTCAAAGCCATGAACCTTGAAATGGAGTCTATGTACTTCAATTCAATGTGGGAGCTTGTACATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGCTGGGAAGGTACAGACCTTCAAAGCGAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGAAACTTTTTCTCCGTTGCTATCTTAA

Protein sequence

MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVETAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVGYPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPSSRVDETATSGQSHPSQSLRMPRRSGRVVVIPDDGVEDPLSYKQAMNDVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPLLS

Homology

[Close]

BLAST of Cmc07g0185421 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 482 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 541

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 542 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 601

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 602 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 661

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 662 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 721

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 722 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 781

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 782 AKGYTQREGVDYEETFSPV 800

[Close]

BLAST of Cmc07g0185421 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 356 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 415

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 416 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 475

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 476 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 535

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 536 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 595

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 596 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 655

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 656 AKGYTQREGVDYEETFSPV 674

[Close]

BLAST of Cmc07g0185421 vs. NCBI nr
Match: TYK02840.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 583.2 bits (1502), Expect = 1.3e-162
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 356 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 415

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 416 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 475

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 476 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 535

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 536 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 595

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 596 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 655

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 656 AKGYTQREGVDYEETFSPV 674

[Close]

BLAST of Cmc07g0185421 vs. NCBI nr
Match: TYK15984.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 577.4 bits (1487), Expect = 7.3e-161
Identity = 283/319 (88.71%), Postives = 294/319 (92.16%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMV SMMSY+QLPSSFWGYAVE
Sbjct: 92  MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVHSMMSYAQLPSSFWGYAVE 151

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVS+ PF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 152 TAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 211

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 212 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 271

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 272 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 331

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 332 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 391

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 392 AKGYTQREGVDYEETFSPV 410

[Close]

BLAST of Cmc07g0185421 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 572.4 bits (1474), Expect = 2.4e-159
Identity = 281/317 (88.64%), Postives = 293/317 (92.43%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDL FQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 482 MDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 541

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 542 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 601

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDP+ENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 602 YPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 661

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 662 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 721

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 722 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 781

Query: 301 AKGYTQREGVDYEETFS 304
           AKGYT++EGVDYEETFS
Sbjct: 782 AKGYTRKEGVDYEETFS 798

[Close]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.7e-49
Identity = 118/343 (34.40%), Postives = 185/343 (53.94%), Query Frame = 0


Query: 5   FQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVETAVH 64
           F++Y   HGI+ + + PGTPQ NGV+ER NRT+++ VRSM+  ++LP SFWG AV+TA +
Sbjct: 560 FEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACY 619

Query: 65  ILNNVPSKSVS-ETPFKLWKGRKPSLSHFRIWGCP--KHMLVTNPKKLEPRSRLCQFVGY 124
           ++N  PS  ++ E P ++W  ++ S SH +++GC    H+      KL+ +S  C F+GY
Sbjct: 620 LINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGY 679

Query: 125 PKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLN----------------- 184
             E      +DP + +V  S++  F  E  +R     S+ V N                 
Sbjct: 680 GDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNPT 739

Query: 185 ---EATDESTRVADEVGPSSRVDETATSG---QSHPSQS------LRMPRR--------- 244
                TDE +   ++ G      E    G     HP+Q       LR   R         
Sbjct: 740 SAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYP 799

Query: 245 SGRVVVIPDDGVEDPLSYKQAMNDVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIG 304
           S   V+I DD   +P S K+ ++  + +Q +KAM  EMES+  N  ++LV LP+G +P+ 
Sbjct: 800 STEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLK 859

Query: 305 CKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPLL 307
           CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSP++
Sbjct: 860 CKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVV 899

[Close]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-28
Identity = 105/420 (25.00%), Postives = 175/420 (41.67%), Query Frame = 0


Query: 6   QDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVETAVHI 65
           + + ++ GI   L+ P TPQ NGVSER  RT+ +  R+M+S ++L  SFWG AV TA ++
Sbjct: 561 RQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYL 620

Query: 66  LNNVPSKSV---SETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPK-KLEPRSRLCQFVGY 125
           +N +PS+++   S+TP+++W  +KP L H R++G   ++ + N + K + +S    FVGY
Sbjct: 621 INRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGY 680

Query: 126 -------------------------------------------PKETRSGLFFDPQENRV 185
                                                       KE+ +  F  P ++R 
Sbjct: 681 EPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNF--PNDSRK 740

Query: 186 FVS----------KNATFLEE-------------------------------DHMRDYKP 245
            +            N  FL++                                 ++D K 
Sbjct: 741 IIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKE 800

Query: 246 RSKLVLNEA-----TDESTRVADEVGPS-SRVDETATS----GQSHPSQSLRMP---RRS 305
            +K  LNE+      D          P+ SR  ETA      G  +P+++  +    RRS
Sbjct: 801 SNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRS 860

[Close]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.3e-27
Identity = 103/441 (23.36%), Postives = 175/441 (39.68%), Query Frame = 0


Query: 7    DYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVETAVHIL 66
            +Y  +HGI    S P TP+ NG+SER++R +++   +++S++ +P ++W YA   AV+++
Sbjct: 602  EYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLI 661

Query: 67   NNVPSKSVS-ETPFKLWKGRKPSLSHFRIWGCPKH--MLVTNPKKLEPRSRLCQFVGYPK 126
            N +P+  +  E+PF+   G  P+    R++GC  +  +   N  KL+ +SR C F+GY  
Sbjct: 662  NRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSL 721

Query: 127  ETRSGLFFDPQENRVFVSKNATFLEE-----------DHMRDYKPRSKLVLNEATDESTR 186
               + L    Q +R+++S++  F E              +++ +  S  V +  T   TR
Sbjct: 722  TQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPTR 781

Query: 187  ---------------------------------------------------VADEVGPSS 246
                                                                  + GP  
Sbjct: 782  TPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQP 841

Query: 247  RVDETATSGQSHPS-----------------QSLRMPRRSGR------------------ 306
                T T  Q+H S                 QSL  P +S                    
Sbjct: 842  TTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTP 901

[Close]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.9e-26
Identity = 108/446 (24.22%), Postives = 181/446 (40.58%), Query Frame = 0


Query: 6    QDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVETAVHI 65
            +DY  +HGI    S P TP+ NG+SER++R +++M  +++S++ +P ++W YA   AV++
Sbjct: 580  RDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYL 639

Query: 66   LNNVPSKSVS-ETPFKLWKGRKPSLSHFRIWGCPKH--MLVTNPKKLEPRSRLCQFVGYP 125
            +N +P+  +  ++PF+   G+ P+    +++GC  +  +   N  KLE +S+ C F+GY 
Sbjct: 640  INRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYS 699

Query: 126  KETRSGLFFDPQENRVFVSKNATFLE---------------EDHMRDYKPR--------- 185
                + L       R++ S++  F E               ++   D  P          
Sbjct: 700  LTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPSHTTLPT 759

Query: 186  SKLV------LNEATDES------------TRVADEVGPSSRVDETATS----------- 245
            + LV      L    D S            T+V+    PSS +   ++S           
Sbjct: 760  TPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQ 819

Query: 246  --GQSH------------------------PSQSLRMPRRSGRVVVIP------------ 305
               Q H                        P+Q+  +P+       IP            
Sbjct: 820  PTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSP 879

Query: 306  -------------------------------------DDGVEDP---LSY---------- 307
                                                  DG+  P    SY          
Sbjct: 880  SSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLAANSEP 939

[Close]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.7e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 233 WVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQ 292
           W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 293 REGVDYEETFSPLL 307
            EG+ + ET+SP++
Sbjct: 100 EEGIYFVETYSPVV 113

[Close]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.5e-163
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 482 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 541

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 542 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 601

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 602 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 661

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 662 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 721

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 722 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 781

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 782 AKGYTQREGVDYEETFSPV 800

[Close]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL
Match: A0A5D3BUN8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00360 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.5e-163
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 356 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 415

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 416 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 475

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 476 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 535

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 536 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 595

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 596 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 655

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 656 AKGYTQREGVDYEETFSPV 674

[Close]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 6.5e-163
Identity = 286/319 (89.66%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 356 MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 415

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 416 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 475

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 476 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 535

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 536 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 595

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 596 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 655

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 656 AKGYTQREGVDYEETFSPV 674

[Close]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL
Match: A0A5D3CYF4 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G001110 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 3.5e-161
Identity = 283/319 (88.71%), Postives = 294/319 (92.16%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDLRFQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMV SMMSY+QLPSSFWGYAVE
Sbjct: 92  MDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVHSMMSYAQLPSSFWGYAVE 151

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVS+ PF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 152 TAVHILNNVPSKSVSKIPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 211

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDPQENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 212 YPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 271

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 272 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 331

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 332 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 391

Query: 301 AKGYTQREGVDYEETFSPL 306
           AKGYTQREGVDYEETFSP+
Sbjct: 392 AKGYTQREGVDYEETFSPV 410

[Close]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 281/317 (88.64%), Postives = 293/317 (92.43%), Query Frame = 0


Query: 1   MDLRFQDYTIEHGIQSQLSEPGTPQQNGVSERRNRTLLDMVRSMMSYSQLPSSFWGYAVE 60
           MDL FQDY IEHGIQSQLS PGTPQQNGVSERRNRTLLDMVRSMMSY+QLPSSFWGYAVE
Sbjct: 482 MDLIFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVE 541

Query: 61  TAVHILNNVPSKSVSETPFKLWKGRKPSLSHFRIWGCPKHMLVTNPKKLEPRSRLCQFVG 120
           TAVHILNNVPSKSVSETPF+LW+GRKPSLSHFRIWGCP H+LVTNPKKLEPRSRLCQFVG
Sbjct: 542 TAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVG 601

Query: 121 YPKETRSGLFFDPQENRVFVSKNATFLEEDHMRDYKPRSKLVLNEATDESTRVADEVGPS 180
           YPKETR GLFFDP+ENRVFVS NATFLEEDHMR++KPRSKLVL+EATDESTRV DEVGPS
Sbjct: 602 YPKETRGGLFFDPKENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTRVVDEVGPS 661

Query: 181 SRVDETATSGQSHPSQSLRMPRRSGRV--------------VVIPDDGVEDPLSYKQAMN 240
           SRVDET TSGQSHPSQSLRMPRRSGRV              VVIPDDGVEDPLSYKQAMN
Sbjct: 662 SRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMN 721

Query: 241 DVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 300
           DVD DQWVKAM+LEMESMYFNS+WELV LPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV
Sbjct: 722 DVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLV 781

Query: 301 AKGYTQREGVDYEETFS 304
           AKGYT++EGVDYEETFS
Sbjct: 782 AKGYTRKEGVDYEETFS 798

[Close]

BLAST of Cmc07g0185421 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 92.0 bits (227), Expect = 8.7e-19
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 216 EDPLSYKQAMNDVDNDQWVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSA 275
           ++P +Y +A   +    W  AM+ E+ +M     WE+  LP   KPIGCKW+YK K +S 
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 276 GKVQTFKARLVAKGYTQREGVDYEETFSPL 306
           G ++ +KARLVAKGYTQ+EG+D+ ETFSP+
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPV 170

[Close]

BLAST of Cmc07g0185421 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-13
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 233 WVKAMNLEMESMYFNSMWELVHLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQ 292
           W +AM  E++++  N  W LV  P     +GCKW++K K  S G +   KARLVAKG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 293 REGVDYEETFSPLL 307
            EG+ + ET+SP++
Sbjct: 100 EEGIYFVETYSPVV 113

[Close]

BLAST of Cmc07g0185421 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 34  NRTLLDMVRSMMSYSQLPSSFWGYAVETAVHILNNVPSKSVS-ETPFKLWKGRKPSLSHF 93
           NRT+++ VRSM+    LP +F   A  TAVHI+N  PS +++   P ++W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 94  RIWGCPKHMLVTNPKKLEPRSR 115
           R +GC  + +  +  KL+PR++
Sbjct: 62  RRFGCVAY-IHCDEGKLKPRAK 82

The following BLAST results are available for this feature:

BLAST of Cmc07g0185421 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	1.3e-162	89.66	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	1.3e-162	89.66	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK02840.1	1.3e-162	89.66	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK15984.1	7.3e-161	88.71	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	2.4e-159	88.64	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0185421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.7e-49	34.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	5.8e-28	25.00	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.3e-27	23.36	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.9e-26	24.22	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92520	7.7e-12	43.24	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc07g0185421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	6.5e-163	89.66	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5D3BUN8	6.5e-163	89.66	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G0036...	[more]
A0A5A7UYE8	6.5e-163	89.66	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5D3CYF4	3.5e-161	88.71	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00111...	[more]
A0A5A7T2V9	1.1e-159	88.64	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of Cmc07g0185421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	8.7e-19	47.78	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	5.5e-13	43.24	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00710.1	1.4e-08	36.59	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..100 e-value: 8.2E-22 score: 79.5
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 247..305 e-value: 3.5E-17 score: 62.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..202
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 192..305 coord: 12..206
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..86 score: 14.120989
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0185421.1	Cmc07g0185421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding