Cmc07g0185391 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0185391
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
LocationCMiso1.1chr07: 3477778 .. 3478975 (-)
RNA-Seq ExpressionCmc07g0185391
SyntenyCmc07g0185391
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTAAAGAGTGCTTTCTTAAATGGATATTTGAATGAAGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCAAAGAATGTGTATAAGCTCAACAAAGCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAATTACTAACTGTTTACTTGAGAGGTAAAGGATATTCTAAAGGAGAAATTGACAAGACCTTATTTATACACAGGAAATCTGATCAACTTTTGGTTGCTCAAATTTATGTTGATGGCTTTATTTTTTGAGGTTTTCCTCAAGATCTTGTAAATAATTTCATCAACATCATGCAGTCAGAATTCGAAATGAGCATGGTTGGAGAACTTTCATGCTTTTTGGGTCTTCAAATTAAGCAAAAGAATGACGGCATCTCATATCTCAGGAAAAGTATGCCAAGAATATGGTTAAAAAGTTTGGTTTGGAAAGGCTCGAAATAAGTGGACTCCAGCTGCAACGCATGTTAAACTTACAAGAGACACTTATGGTGCTAAAGTTGATCACAAACTCTACAGGAGTATAGTAGGCAACTTACTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCCCGTTATCAGGCTGATCCCCGCATCTCTCACCTAGAAGCTGTTAAAATAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACCCTCACTCTTGTTAGATATTGTGATGCTGACTGGGCAGGTTCGGGTGTTGATCGTAAAAGTACGTCTAGAGGATGTTTCTTTTTAGGAAACAATCTAATTTCTTGGTTAAGTAAGAAGCAGAACTGTGTCTCTTTATCTACAACTGAAGCTGAATATATAATAGCAGGTAGTGGTTGTACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCCTTGATCAGGATACTATGATGTTGTATTGTGACAATATGAGCGCAATTGATATATCCAAGAATCCTGTTCAACATAGTCGAACAAAGCACATTGACATAAGACATCATTTTATTCGTGAACTTGTTGAAAATAAAGTAATTAGGCTTGATCATATTCGTTCCAACTTACAATTAGCCGATATTTTCACTAAACCTCTGGATGCAAACTCATTCAAATATTTACGTGCTGGTTTACGAGTGTGTCGCACTTAA

mRNA sequence

ATGGATGTAAAGAGTGCTTTCTTAAATGGATATTTGAATGAAGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCAAAGAATGTGTATAAGCTCAACAAAGCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAATTACTAACTGTTTACTTGAGAGGTAAAGGATATTCTAAAGGAGAAATTGACAAGACCTTATTTATACACAGGAAATCTGATCAACTTTTGGCTCGAAATAAGTGGACTCCAGCTGCAACGCATGTTAAACTTACAAGAGACACTTATGGTGCTAAAGTTGATCACAAACTCTACAGGAGTATAGTAGGCAACTTACTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCCCGTTATCAGGCTGATCCCCGCATCTCTCACCTAGAAGCTGTTAAAATAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACCCTCACTCTTGTTAGATATTGTGATGCTGACTGGGCAGGTTCGGGTGTTGATCGTAAAAGTACGTCTAGAGGATGTTTCTTTTTAGGAAACAATCTAATTTCTTGGTTAAGTAAGAAGCAGAACTGTGTCTCTTTATCTACAACTGAAGCTGAATATATAATAGCAGGTAGTGGTTGTACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCCTTGATCAGGATACTATGATGTTGTATTGTGACAATATGAGCGCAATTGATATATCCAAGAATCCTGTTCAACATAGTCGAACAAAGCACATTGACATAAGACATCATTTTATTCGTGAACTTGTTGAAAATAAAGTAATTAGGCTTGATCATATTCGTTCCAACTTACAATTAGCCGATATTTTCACTAAACCTCTGGATGCAAACTCATTCAAATATTTACGTGCTGGTTTACGAGTGTGTCGCACTTAA

Coding sequence (CDS)

ATGGATGTAAAGAGTGCTTTCTTAAATGGATATTTGAATGAAGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCTGAGCATCCAAAGAATGTGTATAAGCTCAACAAAGCTTTATATGGGCTAAAGCAAGCTCCGAGAGCTTGGTATGAATTACTAACTGTTTACTTGAGAGGTAAAGGATATTCTAAAGGAGAAATTGACAAGACCTTATTTATACACAGGAAATCTGATCAACTTTTGGCTCGAAATAAGTGGACTCCAGCTGCAACGCATGTTAAACTTACAAGAGACACTTATGGTGCTAAAGTTGATCACAAACTCTACAGGAGTATAGTAGGCAACTTACTATATTTAACAGCAAGTCGACCTGACATAGCTTATGTTGTGGGAATATGTGCCCGTTATCAGGCTGATCCCCGCATCTCTCACCTAGAAGCTGTTAAAATAATTCTTAAGTATGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACCCTCACTCTTGTTAGATATTGTGATGCTGACTGGGCAGGTTCGGGTGTTGATCGTAAAAGTACGTCTAGAGGATGTTTCTTTTTAGGAAACAATCTAATTTCTTGGTTAAGTAAGAAGCAGAACTGTGTCTCTTTATCTACAACTGAAGCTGAATATATAATAGCAGGTAGTGGTTGTACACAGTTGATTTGGATGAAAAATATGTTGCATGAATATGGCCTTGATCAGGATACTATGATGTTGTATTGTGACAATATGAGCGCAATTGATATATCCAAGAATCCTGTTCAACATAGTCGAACAAAGCACATTGACATAAGACATCATTTTATTCGTGAACTTGTTGAAAATAAAGTAATTAGGCTTGATCATATTCGTTCCAACTTACAATTAGCCGATATTTTCACTAAACCTCTGGATGCAAACTCATTCAAATATTTACGTGCTGGTTTACGAGTGTGTCGCACTTAA

Protein sequence

MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRGKGYSKGEIDKTLFIHRKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIRSNLQLADIFTKPLDANSFKYLRAGLRVCRT
Homology
BLAST of Cmc07g0185391 vs. NCBI nr
Match: TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 531.2 bits (1367), Expect = 6.4e-147
Identity = 276/379 (72.82%), Postives = 285/379 (75.20%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNEEVYVAQPK FVDSEHPK+VYKLNKALYGLKQAPR WYE LTVYLRG
Sbjct: 1   MDVKSAFLNGYLNEEVYVAQPKDFVDSEHPKHVYKLNKALYGLKQAPRVWYERLTVYLRG 60

Query: 61  KGYSKGEIDKTLFIHRKSDQLL-------------------------------------- 120
           KGYS+GEIDKTLFIHRKSDQLL                                      
Sbjct: 61  KGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSMVGEL 120

Query: 121 ----------------------------------ARNKWTPAATHVKLTRDTYGAKVDHK 180
                                             ARNK TPAATHVKLTRD  GA+VDHK
Sbjct: 121 SCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGAEVDHK 180

Query: 181 LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
           LYRSIV NLLYLTASRPDIAY VGICARYQADPRISHLEAVK ILKYVHGT+DFGMMYSY
Sbjct: 181 LYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFGMMYSY 240

Query: 241 DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
           DTT TLV YCDADWAG   DRKSTS GCFFLGNNLI WLSKKQNCVSLSTTEAEYI+AGS
Sbjct: 241 DTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEYIVAGS 300

Query: 301 GCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVEN 308
           GCTQLIWM+N+L EYG DQ T+ LY DNMSAIDISKNPVQHSR KHIDIRHHFIRELVE+
Sbjct: 301 GCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIRELVED 360

BLAST of Cmc07g0185391 vs. NCBI nr
Match: TYJ97126.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 471.5 bits (1212), Expect = 6.0e-129
Identity = 243/334 (72.75%), Postives = 263/334 (78.74%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNEEVYV QPKGFVDSEHPK+VYKLNKALYGLKQA RAWY+ LTVYLRG
Sbjct: 1   MDVKSAFLNGYLNEEVYVTQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRG 60

Query: 61  KGYSKGE----IDKTLFIH---RKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSI 120
               +      I +  ++    +K     ARNK TPAATHVKLT+DT GAKVDHKLYRSI
Sbjct: 61  LQIKQKNDGIFISQEKYVRSMVKKFGLEQARNKRTPAATHVKLTKDTKGAKVDHKLYRSI 120

Query: 121 VGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLT 180
            G+LLYLTASRPDIAY +GI ARYQA+PRI+HLEAVK ILKYVHGTSDFGMMYSYDTT T
Sbjct: 121 AGSLLYLTASRPDIAYAIGIRARYQANPRITHLEAVKRILKYVHGTSDFGMMYSYDTTPT 180

Query: 181 LVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQL 240
           +V YCDADWAGS  D K                            TEAEY+ AGSGCTQL
Sbjct: 181 IVGYCDADWAGSADDPK----------------------------TEAEYMAAGSGCTQL 240

Query: 241 IWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRL 300
           IWM+NML EYG DQDTM LYCDNMSAIDISKNPVQHSRTKHIDIRHHF+RELVE+KVI+ 
Sbjct: 241 IWMENMLLEYGFDQDTMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFVRELVEDKVIKF 300

Query: 301 DHIRSNLQLADIFTKPLDANSFKYLRAGLRVCRT 328
           DHIRSNLQLADIFTKPLDA+SF+YL AGL VCRT
Sbjct: 301 DHIRSNLQLADIFTKPLDASSFEYLHAGLGVCRT 306

BLAST of Cmc07g0185391 vs. NCBI nr
Match: KAA0066740.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 468.4 bits (1204), Expect = 5.1e-128
Identity = 253/394 (64.21%), Postives = 268/394 (68.02%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKS FLNGYLNEEVYVAQPKGFVDSEH K+VYKLNKALYGLKQAPRAWY+ LTVYLRG
Sbjct: 1   MDVKSVFLNGYLNEEVYVAQPKGFVDSEHLKHVYKLNKALYGLKQAPRAWYDWLTVYLRG 60

Query: 61  KGYSKGEIDKTLFIHRKSDQLL-------------------------------------- 120
           KGYS+GEIDKTLFIHRKSDQLL                                      
Sbjct: 61  KGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGEL 120

Query: 121 ----------------------------------ARNKWTPAATHVKLTRDTYGAKVDHK 180
                                             ARNK TPA THVKLT+D  GA+VDHK
Sbjct: 121 LCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGAEVDHK 180

Query: 181 LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
           LYRSIVG+LLYLTASRPDIAY +GI ARYQ  PRI+HLEA+K ILKYVH T DFGMMYSY
Sbjct: 181 LYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFGMMYSY 240

Query: 241 DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
           DTT TLV YCDADWAGS  DRK                             EAEYI AGS
Sbjct: 241 DTTPTLVGYCDADWAGSTDDRK----------------------------IEAEYIAAGS 300

Query: 301 GCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVEN 323
           GCTQLIWMKN+LHEYG DQDTM LYC+NMSAIDISKN VQHSRTKHIDIRHHFIRE VE 
Sbjct: 301 GCTQLIWMKNVLHEYGFDQDTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 360

BLAST of Cmc07g0185391 vs. NCBI nr
Match: TYK21311.1 (F5J5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 463.4 bits (1191), Expect = 1.6e-126
Identity = 231/324 (71.30%), Postives = 264/324 (81.48%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNE+VYVAQPKGFVDS+ P++VYKLNKALYGLKQAP A YE LT+YL  
Sbjct: 239 MDVKSAFLNGYLNEDVYVAQPKGFVDSDVPQHVYKLNKALYGLKQAPTASYERLTIYL-- 298

Query: 61  KGYSKGEIDKTLFIHRKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSIVGNLLYL 120
           + Y+K ++ K        DQ  +++K TPAATHVK+T+D     +DHKLYRSI+ +LLYL
Sbjct: 299 EKYAKNKVKKF-----GLDQ--SQHKRTPAATHVKITKDINDTAIDHKLYRSIIRSLLYL 358

Query: 121 TASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRYCDA 180
           TASRPDIAY VGICA++Q+DPR SHL  VK I+KYVHGT+DFG++YSYDTT  LV YCDA
Sbjct: 359 TASRPDIAYAVGICAQFQSDPRTSHLTTVKRIIKYVHGTTDFGILYSYDTTSILVGYCDA 418

Query: 181 DWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQLIWMKNML 240
           DW GS  DR+STS GCFFLG     W SKKQ CVSLST E EYI  GSGCTQLIWMKNML
Sbjct: 419 DWVGSADDRESTSSGCFFLG----IWFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNML 478

Query: 241 HEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIRSNL 300
           HEYG+ QD M LYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+I L H+RS  
Sbjct: 479 HEYGITQDVMTLYCDNMSAIDISKYPVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYS 538

Query: 301 QLADIFTKPLDANSFKYLRAGLRV 325
           QLADIFTKPLD  +F++LRAGL V
Sbjct: 539 QLADIFTKPLDETTFEHLRAGLGV 549

BLAST of Cmc07g0185391 vs. NCBI nr
Match: KAA0034956.1 (F5J5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 2.8e-126
Identity = 230/322 (71.43%), Postives = 263/322 (81.68%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNE+VYVAQPKGFVDS+ P++VYKLNKALYGLKQAP A YE LT+YL  
Sbjct: 239 MDVKSAFLNGYLNEDVYVAQPKGFVDSDVPQHVYKLNKALYGLKQAPTASYERLTIYL-- 298

Query: 61  KGYSKGEIDKTLFIHRKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSIVGNLLYL 120
           + Y+K ++ K        DQ  +++K TPAATHVK+T+D     +DHKLYRSI+ +LLYL
Sbjct: 299 EKYAKNKVKKF-----GLDQ--SQHKRTPAATHVKITKDINDTAIDHKLYRSIIRSLLYL 358

Query: 121 TASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRYCDA 180
           TASRPDIAY VGICA++Q+DPR SHL  VK I+KYVHGT+DFG++YSYDTT  LV YCDA
Sbjct: 359 TASRPDIAYAVGICAQFQSDPRTSHLTTVKRIIKYVHGTTDFGILYSYDTTSILVGYCDA 418

Query: 181 DWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQLIWMKNML 240
           DW GS  DR+STS GCFFLG     W SKKQ CVSLST E EYI  GSGCTQLIWMKNML
Sbjct: 419 DWVGSADDRESTSSGCFFLG----IWFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNML 478

Query: 241 HEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIRSNL 300
           HEYG+ QD M LYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+I L H+RS  
Sbjct: 479 HEYGITQDVMTLYCDNMSAIDISKYPVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYS 538

Query: 301 QLADIFTKPLDANSFKYLRAGL 323
           QLADIFTKPLD  +F++LRAGL
Sbjct: 539 QLADIFTKPLDETTFEHLRAGL 547

BLAST of Cmc07g0185391 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.3e-57
Identity = 141/398 (35.43%), Postives = 204/398 (51.26%), Query Frame = 0

Query: 1    MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
            +DVK+AFL+G L EE+Y+ QP+GF  +     V KLNK+LYGLKQAPR WY     +++ 
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   KGYSKGEIDKTLFIHRKSD----------------------------------------- 120
            + Y K   D  ++  R S+                                         
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  --QLL---------ARNKW-----------------------TPAATHVKLTRDTYGAKV 180
              Q+L         +R  W                       TP A H+KL++      V
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  DHK------LYRSIVGNLLY-LTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHG 240
            + K       Y S VG+L+Y +  +RPDIA+ VG+ +R+  +P   H EAVK IL+Y+ G
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TSDFGMMYSYDTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLST 300
            T+   + +     + L  Y DAD AG   +RKS++   F      ISW SK Q CV+LST
Sbjct: 1161 TTGDCLCFGGSDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALST 1220

Query: 301  TEAEYIIAGSGCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIR 317
            TEAEYI A     ++IW+K  L E GL Q   ++YCD+ SAID+SKN + H+RTKHID+R
Sbjct: 1221 TEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVR 1280

BLAST of Cmc07g0185391 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.2e-57
Identity = 140/389 (35.99%), Postives = 192/389 (49.36%), Query Frame = 0

Query: 1    MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
            +DV +AFL G L +EVY++QP GFVD + P  V +L KA+YGLKQAPRAWY  L  YL  
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   KGYSKGEIDKTLFI---------------------------------------------- 120
             G+     D +LF+                                              
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  -------------------HRKSDQLLARNKW-------TPAATHVKLTRDTYGAKVDHK 180
                                R +  LLAR          TP AT  KLT  +     D  
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226

Query: 181  LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
             YR IVG+L YL  +RPD++Y V   ++Y   P   H  A+K +L+Y+ GT D G+    
Sbjct: 1227 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1286

Query: 241  DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
              TL+L  Y DADWAG   D  ST+    +LG++ ISW SKKQ  V  S+TEAEY    +
Sbjct: 1287 GNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1346

Query: 301  GCTQLIWMKNMLHEYGLD-QDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVE 317
              ++L W+ ++L E G+      ++YCDN+ A  +  NPV HSR KHI + +HFIR  V+
Sbjct: 1347 TSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRNQVQ 1406

BLAST of Cmc07g0185391 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 8.3e-57
Identity = 142/399 (35.59%), Postives = 197/399 (49.37%), Query Frame = 0

Query: 1    MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
            +DV +AFL G L ++VY++QP GF+D + P  V KL KALYGLKQAPRAWY  L  YL  
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   KGYSKGEIDKTLFI---------------------------HRKSD-------------- 120
             G+     D +LF+                           H   D              
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  ------------------------QLLARNKW-------TPAATHVKLTRDTYGAKVDHK 180
                                     LLAR          TP A   KL+  +     D  
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPT 1243

Query: 181  LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
             YR IVG+L YL  +RPDI+Y V   +++   P   HL+A+K IL+Y+ GT + G+    
Sbjct: 1244 EYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1303

Query: 241  DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
              TL+L  Y DADWAG   D  ST+    +LG++ ISW SKKQ  V  S+TEAEY    +
Sbjct: 1304 GNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVAN 1363

Query: 301  GCTQLIWMKNMLHEYGLD-QDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVE 327
              +++ W+ ++L E G+      ++YCDN+ A  +  NPV HSR KHI I +HFIR  V+
Sbjct: 1364 TSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQ 1423

BLAST of Cmc07g0185391 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-48
Identity = 129/397 (32.49%), Postives = 198/397 (49.87%), Query Frame = 0

Query: 1    MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
            MDVK+AFLNG L EE+Y+  P+G   S +  NV KLNKA+YGLKQA R W+E+    L+ 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   KGYSKGEIDKTLFIHRK-------------SDQLLARNKWT------------------- 120
              +    +D+ ++I  K              D ++A    T                   
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1120

Query: 121  -------------------PAATHVKLTRDTYG------------AKVDHKLY------- 180
                                 + +VK     +             +K++++L        
Sbjct: 1121 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCN 1180

Query: 181  ---RSIVGNLLY-LTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMY 240
               RS++G L+Y +  +RPD+   V I +RY +       + +K +L+Y+ GT D  +++
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240

Query: 241  SYDTTL--TLVRYCDADWAGSGVDRKSTSRGCFFLGN-NLISWLSKKQNCVSLSTTEAEY 300
              +      ++ Y D+DWAGS +DRKST+   F + + NLI W +K+QN V+ S+TEAEY
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1300

Query: 301  IIAGSGCTQLIWMKNMLHEYGLD-QDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFI 320
            +       + +W+K +L    +  ++ + +Y DN   I I+ NP  H R KHIDI++HF 
Sbjct: 1301 MALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFA 1360

BLAST of Cmc07g0185391 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-23
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 0

Query: 94  VKLTRDTYGAKV-DHKLYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKII 153
           +KL      AK  D   +RSIVG L YLT +RPDI+Y V I  +   +P ++  + +K +
Sbjct: 83  LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRV 142

Query: 154 LKYVHGTSDFGMMYSYDTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQN 213
           L+YV GT   G+    ++ L +  +CD+DWAG    R+ST+  C FLG N+ISW +K+Q 
Sbjct: 143 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202

Query: 214 CVSLSTTEAEYIIAGSGCTQLIW 236
            VS S+TE EY        +L W
Sbjct: 203 TVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc07g0185391 vs. ExPASy TrEMBL
Match: A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 3.1e-147
Identity = 276/379 (72.82%), Postives = 285/379 (75.20%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNEEVYVAQPK FVDSEHPK+VYKLNKALYGLKQAPR WYE LTVYLRG
Sbjct: 1   MDVKSAFLNGYLNEEVYVAQPKDFVDSEHPKHVYKLNKALYGLKQAPRVWYERLTVYLRG 60

Query: 61  KGYSKGEIDKTLFIHRKSDQLL-------------------------------------- 120
           KGYS+GEIDKTLFIHRKSDQLL                                      
Sbjct: 61  KGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMSMVGEL 120

Query: 121 ----------------------------------ARNKWTPAATHVKLTRDTYGAKVDHK 180
                                             ARNK TPAATHVKLTRD  GA+VDHK
Sbjct: 121 SCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGAEVDHK 180

Query: 181 LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
           LYRSIV NLLYLTASRPDIAY VGICARYQADPRISHLEAVK ILKYVHGT+DFGMMYSY
Sbjct: 181 LYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFGMMYSY 240

Query: 241 DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
           DTT TLV YCDADWAG   DRKSTS GCFFLGNNLI WLSKKQNCVSLSTTEAEYI+AGS
Sbjct: 241 DTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEYIVAGS 300

Query: 301 GCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVEN 308
           GCTQLIWM+N+L EYG DQ T+ LY DNMSAIDISKNPVQHSR KHIDIRHHFIRELVE+
Sbjct: 301 GCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIRELVED 360

BLAST of Cmc07g0185391 vs. ExPASy TrEMBL
Match: A0A5D3BDQ5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1605G00020 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.9e-129
Identity = 243/334 (72.75%), Postives = 263/334 (78.74%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNEEVYV QPKGFVDSEHPK+VYKLNKALYGLKQA RAWY+ LTVYLRG
Sbjct: 1   MDVKSAFLNGYLNEEVYVTQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRLTVYLRG 60

Query: 61  KGYSKGE----IDKTLFIH---RKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSI 120
               +      I +  ++    +K     ARNK TPAATHVKLT+DT GAKVDHKLYRSI
Sbjct: 61  LQIKQKNDGIFISQEKYVRSMVKKFGLEQARNKRTPAATHVKLTKDTKGAKVDHKLYRSI 120

Query: 121 VGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLT 180
            G+LLYLTASRPDIAY +GI ARYQA+PRI+HLEAVK ILKYVHGTSDFGMMYSYDTT T
Sbjct: 121 AGSLLYLTASRPDIAYAIGIRARYQANPRITHLEAVKRILKYVHGTSDFGMMYSYDTTPT 180

Query: 181 LVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQL 240
           +V YCDADWAGS  D K                            TEAEY+ AGSGCTQL
Sbjct: 181 IVGYCDADWAGSADDPK----------------------------TEAEYMAAGSGCTQL 240

Query: 241 IWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRL 300
           IWM+NML EYG DQDTM LYCDNMSAIDISKNPVQHSRTKHIDIRHHF+RELVE+KVI+ 
Sbjct: 241 IWMENMLLEYGFDQDTMTLYCDNMSAIDISKNPVQHSRTKHIDIRHHFVRELVEDKVIKF 300

Query: 301 DHIRSNLQLADIFTKPLDANSFKYLRAGLRVCRT 328
           DHIRSNLQLADIFTKPLDA+SF+YL AGL VCRT
Sbjct: 301 DHIRSNLQLADIFTKPLDASSFEYLHAGLGVCRT 306

BLAST of Cmc07g0185391 vs. ExPASy TrEMBL
Match: A0A5D3DWS6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00720 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 2.5e-128
Identity = 253/394 (64.21%), Postives = 268/394 (68.02%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKS FLNGYLNEEVYVAQPKGFVDSEH K+VYKLNKALYGLKQAPRAWY+ LTVYLRG
Sbjct: 1   MDVKSVFLNGYLNEEVYVAQPKGFVDSEHLKHVYKLNKALYGLKQAPRAWYDWLTVYLRG 60

Query: 61  KGYSKGEIDKTLFIHRKSDQLL-------------------------------------- 120
           KGYS+GEIDKTLFIHRKSDQLL                                      
Sbjct: 61  KGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMSMVGEL 120

Query: 121 ----------------------------------ARNKWTPAATHVKLTRDTYGAKVDHK 180
                                             ARNK TPA THVKLT+D  GA+VDHK
Sbjct: 121 LCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGAEVDHK 180

Query: 181 LYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSY 240
           LYRSIVG+LLYLTASRPDIAY +GI ARYQ  PRI+HLEA+K ILKYVH T DFGMMYSY
Sbjct: 181 LYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFGMMYSY 240

Query: 241 DTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGS 300
           DTT TLV YCDADWAGS  DRK                             EAEYI AGS
Sbjct: 241 DTTPTLVGYCDADWAGSTDDRK----------------------------IEAEYIAAGS 300

Query: 301 GCTQLIWMKNMLHEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVEN 323
           GCTQLIWMKN+LHEYG DQDTM LYC+NMSAIDISKN VQHSRTKHIDIRHHFIRE VE 
Sbjct: 301 GCTQLIWMKNVLHEYGFDQDTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 360

BLAST of Cmc07g0185391 vs. ExPASy TrEMBL
Match: A0A5D3DCC3 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00200 PE=4 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 7.9e-127
Identity = 231/324 (71.30%), Postives = 264/324 (81.48%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNE+VYVAQPKGFVDS+ P++VYKLNKALYGLKQAP A YE LT+YL  
Sbjct: 239 MDVKSAFLNGYLNEDVYVAQPKGFVDSDVPQHVYKLNKALYGLKQAPTASYERLTIYL-- 298

Query: 61  KGYSKGEIDKTLFIHRKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSIVGNLLYL 120
           + Y+K ++ K        DQ  +++K TPAATHVK+T+D     +DHKLYRSI+ +LLYL
Sbjct: 299 EKYAKNKVKKF-----GLDQ--SQHKRTPAATHVKITKDINDTAIDHKLYRSIIRSLLYL 358

Query: 121 TASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRYCDA 180
           TASRPDIAY VGICA++Q+DPR SHL  VK I+KYVHGT+DFG++YSYDTT  LV YCDA
Sbjct: 359 TASRPDIAYAVGICAQFQSDPRTSHLTTVKRIIKYVHGTTDFGILYSYDTTSILVGYCDA 418

Query: 181 DWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQLIWMKNML 240
           DW GS  DR+STS GCFFLG     W SKKQ CVSLST E EYI  GSGCTQLIWMKNML
Sbjct: 419 DWVGSADDRESTSSGCFFLG----IWFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNML 478

Query: 241 HEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIRSNL 300
           HEYG+ QD M LYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+I L H+RS  
Sbjct: 479 HEYGITQDVMTLYCDNMSAIDISKYPVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYS 538

Query: 301 QLADIFTKPLDANSFKYLRAGLRV 325
           QLADIFTKPLD  +F++LRAGL V
Sbjct: 539 QLADIFTKPLDETTFEHLRAGLGV 549

BLAST of Cmc07g0185391 vs. ExPASy TrEMBL
Match: A0A5A7SYI8 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold434G00200 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.4e-126
Identity = 230/322 (71.43%), Postives = 263/322 (81.68%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFVDSEHPKNVYKLNKALYGLKQAPRAWYELLTVYLRG 60
           MDVKSAFLNGYLNE+VYVAQPKGFVDS+ P++VYKLNKALYGLKQAP A YE LT+YL  
Sbjct: 239 MDVKSAFLNGYLNEDVYVAQPKGFVDSDVPQHVYKLNKALYGLKQAPTASYERLTIYL-- 298

Query: 61  KGYSKGEIDKTLFIHRKSDQLLARNKWTPAATHVKLTRDTYGAKVDHKLYRSIVGNLLYL 120
           + Y+K ++ K        DQ  +++K TPAATHVK+T+D     +DHKLYRSI+ +LLYL
Sbjct: 299 EKYAKNKVKKF-----GLDQ--SQHKRTPAATHVKITKDINDTAIDHKLYRSIIRSLLYL 358

Query: 121 TASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRYCDA 180
           TASRPDIAY VGICA++Q+DPR SHL  VK I+KYVHGT+DFG++YSYDTT  LV YCDA
Sbjct: 359 TASRPDIAYAVGICAQFQSDPRTSHLTTVKRIIKYVHGTTDFGILYSYDTTSILVGYCDA 418

Query: 181 DWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYIIAGSGCTQLIWMKNML 240
           DW GS  DR+STS GCFFLG     W SKKQ CVSLST E EYI  GSGCTQLIWMKNML
Sbjct: 419 DWVGSADDRESTSSGCFFLG----IWFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNML 478

Query: 241 HEYGLDQDTMMLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRELVENKVIRLDHIRSNL 300
           HEYG+ QD M LYCDNMSAIDISK PVQHS+TKHIDIRHHFIREL+ENK+I L H+RS  
Sbjct: 479 HEYGITQDVMTLYCDNMSAIDISKYPVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYS 538

Query: 301 QLADIFTKPLDANSFKYLRAGL 323
           QLADIFTKPLD  +F++LRAGL
Sbjct: 539 QLADIFTKPLDETTFEHLRAGL 547

BLAST of Cmc07g0185391 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 165.6 bits (418), Expect = 6.6e-41
Identity = 111/361 (30.75%), Postives = 162/361 (44.88%), Query Frame = 0

Query: 1   MDVKSAFLNGYLNEEVYVAQPKGFV----DSEHPKNVYKLNKALYGLKQAPRAWYELLTV 60
           +D+ +AFLNG L+EE+Y+  P G+     DS  P  V  L K++YGLKQA R W+   +V
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  YLRGKGYSKGEIDKTLFIHRKS-----------------------DQLLARNK------- 120
            L G G+ +   D T F+   +                       D+L ++ K       
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 ------------------------------------------WTPAATHVKLTRDTYGAK 180
                                                       P    V  +  + G  
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 181 VDHKLYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGM 240
           VD K YR ++G L+YL  +R DI++ V   +++   PR++H +AV  IL Y+ GT   G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432

Query: 241 MYSYDTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQNCVSLSTTEAEYI 285
            YS    + L  + DA +      R+ST+  C FLG +LISW SKKQ  VS S+ EAEY 
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYR 492

BLAST of Cmc07g0185391 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 3.3e-24
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 0

Query: 94  VKLTRDTYGAKV-DHKLYRSIVGNLLYLTASRPDIAYVVGICARYQADPRISHLEAVKII 153
           +KL      AK  D   +RSIVG L YLT +RPDI+Y V I  +   +P ++  + +K +
Sbjct: 83  LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRV 142

Query: 154 LKYVHGTSDFGMMYSYDTTLTLVRYCDADWAGSGVDRKSTSRGCFFLGNNLISWLSKKQN 213
           L+YV GT   G+    ++ L +  +CD+DWAG    R+ST+  C FLG N+ISW +K+Q 
Sbjct: 143 LRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQP 202

Query: 214 CVSLSTTEAEYIIAGSGCTQLIW 236
            VS S+TE EY        +L W
Sbjct: 203 TVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc07g0185391 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 59.3 bits (142), Expect = 6.6e-09
Identity = 30/88 (34.09%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 118 LYLTASRPDIAYVVGICARYQADPRISHLEAVKIILKYVHGTSDFGMMYSYDTTLTLVRY 177
           +YLT +RPD+ + V   +++ +  R + ++AV  +L YV GT   G+ YS  + L L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 178 CDADWAGSGVDRKSTSRGC-----FFLG 201
            D+DWA     R+S +  C     +FLG
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLVPLWFLG 88

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK23188.16.4e-14772.82gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYJ97126.16.0e-12972.75gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0066740.15.1e-12864.21gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [... [more]
TYK21311.11.6e-12671.30F5J5.1 [Cucumis melo var. makuwa][more]
KAA0034956.12.8e-12671.43F5J5.1 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109781.3e-5735.43Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q9ZT942.2e-5735.99Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW28.3e-5735.59Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P041461.4e-4832.49Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925194.6e-2340.56Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3DI973.1e-14772.82Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G... [more]
A0A5D3BDQ52.9e-12972.75Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1605... [more]
A0A5D3DWS62.5e-12864.21Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G... [more]
A0A5D3DCC37.9e-12771.30F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00200 PE=4 S... [more]
A0A5A7SYI81.4e-12671.43F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold434G00200 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT4G23160.16.6e-4130.75cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.13.3e-2440.56DNA/RNA polymerases superfamily protein [more]
ATMG00240.16.6e-0934.09Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..77
e-value: 2.5E-21
score: 76.4
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 190..324
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 190..324
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 177..310
e-value: 5.06037E-78
score: 232.744
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..278

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0185391.1Cmc07g0185391.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding