Cmc07g0185101 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0185101
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr07: 3138151 .. 3138903 (-)
RNA-Seq Expression	Cmc07g0185101
Synteny	Cmc07g0185101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGATCATGAGATCGAGTTGGTGCCAGAGGCAAAATCGCCTGCAAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTGAAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCATGCCCTGAATAAGCTCACAGTTCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTTATAATGCCATTTGGTCTCACCAATGCCCCTTCAACCTTCTGTACATTAATGAACCAGGTCTTCTACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTATAGCCGAATTGGAATGGAAGAAGGGAAGATTGCTACGATACGCGACTGGCAATGTCGAAATCAGTCTCAGAGTTACGCTCCTTTCTCGGACTGGTAA

mRNA sequence

ATGATCGATCATGAGATCGAGTTGGTGCCAGAGGCAAAATCGCCTGCAAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTGAAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCATGCCCTGAATAAGCTCACAGTTCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTTATAATGCCATTTGGTCTCACCAATGCCCCTTCAACCTTCTGTACATTAATGAACCAGGTCTTCTACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTATAGCCGAATTGGAATGGAAGAAGGGAAGATTGCTACGATACGCGACTGGCAATGTCGAAATCAGTCTCAGAGTTACGCTCCTTTCTCGGACTGGTAA

Coding sequence (CDS)

ATGATCGATCATGAGATCGAGTTGGTGCCAGAGGCAAAATCGCCTGCAAAGAATGCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTCGGAAACAGTTAGATGAGTTACTGAATGCAGGGTTCATTAGGCCTGAAAAAGCTCCGTATGGGGCCCCAGTTCTTTTCCAGAAGAAGAAAGATGGGAGTTTACGATTGTGCATTGATTATCATGCCCTGAATAAGCTCACAGTTCGTAACAAGTATCCACTTCCCATAATTACTGACTTGTTCGATCGCTTACATGGGGCGAAGTATTTTTCAAAGTTAGACTTGCGGTCGGGATACTACCAAGTGAGAATTGCAGAGGGAGATGAGCCGAAGACAACCTGTGTCACCCGATATGGTGCGTTCGAATTCCTTATAATGCCATTTGGTCTCACCAATGCCCCTTCAACCTTCTGTACATTAATGAACCAGGTCTTCTACGAATATCTCGATAAATTCGTAGTAGTCTACCTGGATGATATAGTGGTCTATAGTACGACCATGGAGGAACATAGAGACCACCTGCAAAAGGTTTTTCAGAAATTGAAGGAGAATCAACTGTATGTCAAAAGAGAAAAATGCTCTTTTGCACAAGAGCGGATAAACTTCTTGGGCCATGTGATAGAGTATAGCCGAATTGGAATGGAAGAAGGGAAGATTGCTACGATACGCGACTGGCAATGTCGAAATCAGTCTCAGAGTTACGCTCCTTTCTCGGACTGGTAA

Protein sequence

MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW

Homology

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BLAST of Cmc07g0185101 vs. NCBI nr
Match: KAA0066677.1 (uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 496.1 bits (1276), Expect = 1.7e-136
Identity = 239/250 (95.60%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLN GFIRP KAPYGAPVLFQKKK
Sbjct: 589 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKK 648

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 649 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 708

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+T CTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 709 KTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 768

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ 240
           RDH QKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ
Sbjct: 769 RDHQQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ 828

Query: 241 SQSYAPFSDW 251
           S+SYAPFSDW
Sbjct: 829 SRSYAPFSDW 838

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BLAST of Cmc07g0185101 vs. NCBI nr
Match: KAA0066680.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 474.6 bits (1220), Expect = 5.4e-130
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 81
           MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 60

Query: 82  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 141
           YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT
Sbjct: 61  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 120

Query: 142 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 201
           NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
Sbjct: 121 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 180

Query: 202 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW 251
           KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQS+SYAPFSDW
Sbjct: 181 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSRSYAPFSDW 229

[Close]

BLAST of Cmc07g0185101 vs. NCBI nr
Match: TYK27830.1 (RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 81
           MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 60

Query: 82  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 141
           YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIM FGLT
Sbjct: 61  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMSFGLT 120

Query: 142 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 201
           NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
Sbjct: 121 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 180

Query: 202 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW 251
           KCSFAQERINFLGHVIEYS+IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Sbjct: 181 KCSFAQERINFLGHVIEYSQIGMEEGKIATIRDWQCRNQSRSYAPFSDW 229

[Close]

BLAST of Cmc07g0185101 vs. NCBI nr
Match: TYK07954.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 225/235 (95.74%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 623 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 682

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 683 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 742

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 743 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 802

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
           RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Sbjct: 803 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW 857

[Close]

BLAST of Cmc07g0185101 vs. NCBI nr
Match: KAA0067557.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 461.8 bits (1187), Expect = 3.6e-126
Identity = 224/235 (95.32%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 649 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 708

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 709 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 768

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 769 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 828

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
           RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Sbjct: 829 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW 883

[Close]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50
Identity = 101/234 (43.16%), Postives = 142/234 (60.68%), Query Frame = 0


Query: 2   IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKD 61
           + H+IE+ P A+ P    Y +      E+ K + +LL+  FI P K+P  +PV+   KKD
Sbjct: 584 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 643

Query: 62  GSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK 121
           G+ RLC+DY  LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  K
Sbjct: 644 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 703

Query: 122 TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHR 181
           T  VT  G +E+ +MPFGL NAPSTF   M   F +   +FV VYLDDI+++S + EEH 
Sbjct: 704 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 763

Query: 182 DHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
            HL  V ++LK   L VK++KC FA E   FLG+ I   +I   + K A IRD+
Sbjct: 764 KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 815

[Close]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 201.4 bits (511), Expect = 1.2e-50
Identity = 101/234 (43.16%), Postives = 142/234 (60.68%), Query Frame = 0


Query: 2   IDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKD 61
           + H+IE+ P A+ P    Y +      E+ K + +LL+  FI P K+P  +PV+   KKD
Sbjct: 610 VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKD 669

Query: 62  GSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPK 121
           G+ RLC+DY  LNK T+ + +PLP I +L  R+  A+ F+ LDL SGY+Q+ +   D  K
Sbjct: 670 GTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYK 729

Query: 122 TTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHR 181
           T  VT  G +E+ +MPFGL NAPSTF   M   F +   +FV VYLDDI+++S + EEH 
Sbjct: 730 TAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHW 789

Query: 182 DHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
            HL  V ++LK   L VK++KC FA E   FLG+ I   +I   + K A IRD+
Sbjct: 790 KHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDF 841

[Close]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.2e-47
Identity = 90/128 (70.31%), Postives = 107/128 (83.59%), Query Frame = 0


Query: 63  SLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKT 122
           SLR+CIDY AL K+T++NKYP+P + DLFDRL  A +F+KLDLRSGY+QVRIA+GDEPKT
Sbjct: 5   SLRMCIDYRALTKVTIKNKYPIPRVDDLFDRLAQATWFTKLDLRSGYWQVRIAKGDEPKT 64

Query: 123 TCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVV---YSTTMEE 182
           TCVTRYG+FEF +MPFGLTNA +TFC LMN V YEYLD FVVVYLDD+VV   YS ++ E
Sbjct: 65  TCVTRYGSFEFRVMPFGLTNALATFCNLMNNVLYEYLDHFVVVYLDDLVVYTIYSNSLHE 124

Query: 183 HRDHLQKV 188
           H  HL+ V
Sbjct: 125 HIKHLRVV 132

[Close]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.9e-41
Identity = 84/236 (35.59%), Postives = 138/236 (58.47%), Query Frame = 0


Query: 2   IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 61
           ++ E+EL  E  + P +N Y + P ++  +  ++++ L +G IR  KA    PV+F  KK
Sbjct: 400 LEFEVELTQENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKK 459

Query: 62  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 121
           +G+LR+ +DY  LNK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE 
Sbjct: 460 EGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEH 519

Query: 122 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 181
           K       G FE+L+MP+G++ AP+ F   +N +  E  +  VV Y+DDI+++S +  EH
Sbjct: 520 KLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEH 579

Query: 182 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ 237
             H++ V QKLK   L + + KC F Q ++ F+G+ I        +  I  +  W+
Sbjct: 580 VKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWK 634

[Close]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.9e-41
Identity = 84/236 (35.59%), Postives = 138/236 (58.47%), Query Frame = 0


Query: 2   IDHEIELVPE-AKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 61
           ++ E+EL  E  + P +N Y + P ++  +  ++++ L +G IR  KA    PV+F  KK
Sbjct: 400 LEFEVELTQENYRLPIRN-YPLPPGKMQAMNDEINQGLKSGIIRESKAINACPVMFVPKK 459

Query: 62  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 121
           +G+LR+ +DY  LNK    N YPLP+I  L  ++ G+  F+KLDL+S Y+ +R+ +GDE 
Sbjct: 460 EGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEH 519

Query: 122 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 181
           K       G FE+L+MP+G++ AP+ F   +N +  E  +  VV Y+DDI+++S +  EH
Sbjct: 520 KLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEH 579

Query: 182 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQ 237
             H++ V QKLK   L + + KC F Q ++ F+G+ I        +  I  +  W+
Sbjct: 580 VKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWK 634

[Close]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL
Match: A0A5A7VHT2 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00020 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 8.4e-137
Identity = 239/250 (95.60%), Postives = 243/250 (97.20%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLN GFIRP KAPYGAPVLFQKKK
Sbjct: 589 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNVGFIRPAKAPYGAPVLFQKKK 648

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 649 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 708

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+T CTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 709 KTTCVTRYGAFEFLVMPFGLTNAPATLCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 768

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ 240
           RDH QKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ
Sbjct: 769 RDHQQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQ 828

Query: 241 SQSYAPFSDW 251
           S+SYAPFSDW
Sbjct: 829 SRSYAPFSDW 838

[Close]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL
Match: A0A5A7VHL6 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G00080 PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 2.6e-130
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 81
           MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 60

Query: 82  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 141
           YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT
Sbjct: 61  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 120

Query: 142 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 201
           NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
Sbjct: 121 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 180

Query: 202 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW 251
           KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQS+SYAPFSDW
Sbjct: 181 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSRSYAPFSDW 229

[Close]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL
Match: A0A5D3DX59 (RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00020 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 6.5e-129
Identity = 226/229 (98.69%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 22  MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 81
           MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK
Sbjct: 1   MAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKKDGSLRLCIDYHALNKLTVRNK 60

Query: 82  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMPFGLT 141
           YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIM FGLT
Sbjct: 61  YPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEPKTTCVTRYGAFEFLIMSFGLT 120

Query: 142 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 201
           NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE
Sbjct: 121 NAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEHRDHLQKVFQKLKENQLYVKRE 180

Query: 202 KCSFAQERINFLGHVIEYSRIGMEEGKIATIRDWQCRNQSQSYAPFSDW 251
           KCSFAQERINFLGHVIEYS+IGMEEGKIATIRDWQCRNQS+SYAPFSDW
Sbjct: 181 KCSFAQERINFLGHVIEYSQIGMEEGKIATIRDWQCRNQSRSYAPFSDW 229

[Close]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL
Match: A0A5D3C9P8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00750 PE=4 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127
Identity = 225/235 (95.74%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQKKK
Sbjct: 623 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQKKK 682

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 683 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 742

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 743 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 802

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
           RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Sbjct: 803 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW 857

[Close]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.8e-126
Identity = 224/235 (95.32%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MIDHEIELVPEAKSPAKNAYRMAPPELAELRKQLDELLNAGFIRPEKAPYGAPVLFQKKK 60
           MIDHEIELVP AK PAKNAYRMAPPELAELRKQLDELLNAGFIRP KAPYGAPVLFQ+KK
Sbjct: 653 MIDHEIELVPGAKPPAKNAYRMAPPELAELRKQLDELLNAGFIRPAKAPYGAPVLFQRKK 712

Query: 61  DGSLRLCIDYHALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 120
           DGSLRLCIDY ALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP
Sbjct: 713 DGSLRLCIDYRALNKLTVRNKYPLPIITDLFDRLHGAKYFSKLDLRSGYYQVRIAEGDEP 772

Query: 121 KTTCVTRYGAFEFLIMPFGLTNAPSTFCTLMNQVFYEYLDKFVVVYLDDIVVYSTTMEEH 180
           KTTCVTRYGAFEFL+MPFGLTNAP+TFCTLMNQVF+EYLDKFVVVYLDDIVVYSTTMEEH
Sbjct: 773 KTTCVTRYGAFEFLVMPFGLTNAPATFCTLMNQVFHEYLDKFVVVYLDDIVVYSTTMEEH 832

Query: 181 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIEYSRIGMEEGKIATIRDW 236
           RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIE  RIGMEEGKIA IRDW
Sbjct: 833 RDHLQKVFQKLKENQLYVKREKCSFAQERINFLGHVIECGRIGMEEGKIAAIRDW 887

The following BLAST results are available for this feature:

BLAST of Cmc07g0185101 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066677.1	1.7e-136	95.60	uncharacterized protein E6C27_scaffold271G00020 [Cucumis melo var. makuwa]	[more]
KAA0066680.1	5.4e-130	99.56	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
TYK27830.1	1.3e-128	98.69	RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]	[more]
TYK07954.1	1.6e-126	95.74	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0067557.1	3.6e-126	95.32	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc07g0185101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	1.2e-50	43.16	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.2e-50	43.16	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P31843	1.2e-47	70.31	RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1	[more]
P0CT41	2.9e-41	35.59	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.9e-41	35.59	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHT2	8.4e-137	95.60	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7VHL6	2.6e-130	99.56	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3DX59	6.5e-129	98.69	RNA-directed DNA polymerase-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3C9P8	7.9e-127	95.74	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5D3C4R1	1.8e-126	95.32	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]

BLAST of Cmc07g0185101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..142 e-value: 1.5E-89 score: 300.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 3..240
None	No IPR available	PANTHER	PTHR24559:SF363	SUBFAMILY NOT NAMED	coord: 3..240
None	No IPR available	CDD	cd01647	RT_LTR	coord: 41..217 e-value: 6.80504E-93 score: 269.08
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 82..217 e-value: 1.5E-89 score: 300.8
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 58..216 e-value: 1.5E-29 score: 103.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 38..217 score: 13.877373
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0185101.1	Cmc07g0185101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding