Cmc07g0183451 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0183451
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Glycosyl hydrolase family 35 protein
Location	CMiso1.1chr07: 1946099 .. 1948084 (-)
RNA-Seq Expression	Cmc07g0183451
Synteny	Cmc07g0183451

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTCTTCAATTTCTTTTATAAAGATCCGTTATTTAAAGTCCGAGTTCGTTTGTTTTTTCCTGACGGCTCGCATTCCAATTCTCTGCCATTTTAAATTTGTAAAATGGACACAAGTTTCTGCAAACTCAAAGCAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCTTCTTCTGATCCAATTTAATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTGTGCTTTTCGTTTCTTTTTCTGGGTACATTCACATTTTGGAGTTGTTGGATTATTTTTTTTTTCTGGGTTTGATCTGCATTTTTCTCATTATTTCATTATGAAGCTTTCTGGGTTTTGGGTTTTGTTTTTCGTCCTCCAAACAACTTTATTGCTGCTTTTCTTTCCCGGCTATATAAATGCCTCCTCCAGCTCTGGTAATTTGGAAGTTAATGTTTGTTTTTAACACATTTTTCACTTCTTTATTTGCTTGTCGCTTTCACTTCAATCTTACTGCATTTATGTAAATGTCTTCTTGTTTGTCGCATTTCAATACTTATTACTGTAATGGGTTTTTTCTTTTTGCCCCATACTAGAGTTCCTTTGTTTCTTCGGTTTTTTATGTTAAATTAGGATTACTGAAGCTAATCCAGAACAATTCTGTTGTCCTTCTAGTGCTTCTGTTCTGTTGCTTTTTTTCATGTCTTTAACAATTTTGGTATGTTCATACTAAAGAATGTCTGCAGGTTAGATCACATATTTAAGCACCCCTGTCTCAGCCATGTTCGAGTCCACGTTGAATAATTTCATCCTTGCGTATTGAAATTCGAAGTTACAGCATCAAGTATATAGGCAGAGACCGAGTTGTTTTGCATATCTGAGTTGTGAATTTGTATGTTATTCTACTGTGACTTTGCATGTTGATTTTGCTGTGTTTTTCTTGACTGCATTCGCAGATATAGCTTTGAACCAACACCATGTTAATGCAAAGAAATGTTTGTCTGACATACCATTAAACAGGAAACTGAAGGTACTTGCTTTTCAAAGGCTTTTAAATCCAACAAGTCATTTTCACTTGTGTCATAATACATTTCGAGAGAATAGAGTATAGTTCCTTCCAAATTAATTGTTTCTTGATTAATGAGATTGATGACAACTGTCTATGATGAATGGAATTGAATTCCCTTTTTTGGTTCTCAGTTCCAGACTGATGAACATAGTAACCTCGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAAACATCAGTCAAACCCGGGCCGATAGAGCACAGCGCTCCTCTCCTCCCTCATATGCCAAATCCTCCACCTCCCAATCAGCCAGGCGGTTACGCTTAGATAGCACAAACGTTTACCTTCTCTACTAGTTGTCTTAAATAATTCAAGTTTGTTTTTTCATGGAAACCAAACCAACTACGTTATCCTGTCTCTTTTATTTCGTGTATTTAGTTGTCTTGTGTGTTGTCATTCCCATTAAGTATCCTTTAAATGATTTATCTTCTGTTATTTACAGAAACAAAACAGTCATTATTCTATACTATGTGTGTTTGTCTCAATCCCTTCTGTTGAAATATCTATAGGAAGCAAAAGGGATGAAGGGGTGTGGTAATCAACCAAGAGCACCAACTCCATTGAAATAGATAGAAGATCAAAGGGGAATATTTTCTTCTTCCTTAAGCTAAAAATTGTAACCACCAACTTTGGGGGATTAAAATCCCATCAATCAACATCTAAACCAGTGTGCTTTCCTTCCACTTCAGTCTTTTTCCTGCATCCTTCAATAAAACATTATGAAGGCTAAGCTCAGAAATGAGGAAAGCCCAATTATAGCTTTTTAATTA

mRNA sequence

TGTTCTTCAATTTCTTTTATAAAGATCCGTTATTTAAAGTCCGAGTTCGTTTGTTTTTTCCTGACGGCTCGCATTCCAATTCTCTGCCATTTTAAATTTGTAAAATGGACACAAGTTTCTGCAAACTCAAAGCAAACATTTACTCCTCCACAGCCTGTACCCAATGCAGATGATATGATAAACAAGCATTGACGATCCCCTGATTTCTTTTATTGTTCTTCTTCTGATCCAATTTAATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTATATAGCTTTGAACCAACACCATGTTAATGCAAAGAAATGTTTGTCTGACATACCATTAAACAGGAAACTGAAGTTCCAGACTGATGAACATAGTAACCTCGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAAACATCAGTCAAACCCGGGCCGATAGAGCACAGCGCTCCTCTCCTCCCTCATATGCCAAATCCTCCACCTCCCAATCAGCCAGGCGGTTACGCTTAGATAGCACAAACGTTTACCTTCTCTACTAGTTGTCTTAAATAATTCAAGTTTGTTTTTTCATGGAAACCAAACCAACTACGTTATCCTGTCTCTTTTATTTCGTGTATTTAGTTGTCTTGTGTGTTGTCATTCCCATTAAGTATCCTTTAAATGATTTATCTTCTGTTATTTACAGAAACAAAACAGTCATTATTCTATACTATGTGTGTTTGTCTCAATCCCTTCTGTTGAAATATCTATAGGAAGCAAAAGGGATGAAGGGGTGTGGTAATCAACCAAGAGCACCAACTCCATTGAAATAGATAGAAGATCAAAGGGGAATATTTTCTTCTTCCTTAAGCTAAAAATTGTAACCACCAACTTTGGGGGATTAAAATCCCATCAATCAACATCTAAACCAGTGTGCTTTCCTTCCACTTCAGTCTTTTTCCTGCATCCTTCAATAAAACATTATGAAGGCTAAGCTCAGAAATGAGGAAAGCCCAATTATAGCTTTTTAATTA

Coding sequence (CDS)

ATGCTATTCCATATTTCCACTGTTGTTTTAAACCCCCCATGGACGACCATTTTTGAAGCTAACACACCTTGGAAGTGGAAGAAGAGGGTCTATATAGCTTTGAACCAACACCATGTTAATGCAAAGAAATGTTTGTCTGACATACCATTAAACAGGAAACTGAAGTTCCAGACTGATGAACATAGTAACCTCGGGAGAAAGAAGGTTCACCCAGGTGATCTAAATCTTGATGACTACCATCCCATTGATCCAGTTCCAAGTTCAAAAACATCAGTCAAACCCGGGCCGATAGAGCACAGCGCTCCTCTCCTCCCTCATATGCCAAATCCTCCACCTCCCAATCAGCCAGGCGGTTACGCTTAG

Protein sequence

MLFHISTVVLNPPWTTIFEANTPWKWKKRVYIALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTSVKPGPIEHSAPLLPHMPNPPPPNQPGGYA

Homology

[Close]

BLAST of Cmc07g0183451 vs. NCBI nr
Match: XP_008452636.1 (PREDICTED: uncharacterized protein LOC103493595 [Cucumis melo])

HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALNQHHVNAKKCLSD+PLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS
Sbjct: 34  IALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 93

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEHSAPLLPHMPNPPPPNQPGGYA
Sbjct: 94  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 122

[Close]

BLAST of Cmc07g0183451 vs. NCBI nr
Match: KAA0064434.1 (uncharacterized protein E6C27_scaffold255G001460 [Cucumis melo var. makuwa] >TYK20154.1 uncharacterized protein E5676_scaffold134G002820 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALNQHHVNAKKCLSD+PLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS
Sbjct: 5   IALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 64

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEHSAPLLPHMPNPPPPNQPGGYA
Sbjct: 65  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 93

[Close]

BLAST of Cmc07g0183451 vs. NCBI nr
Match: KAE8649878.1 (hypothetical protein Csa_012522 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39
Identity = 81/89 (91.01%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALN HHVNA KCLSDI LNRKLKFQTDEH N GRKKVHP DLNLDDYHPIDPVPSSKTS
Sbjct: 179 IALNHHHVNANKCLSDILLNRKLKFQTDEHCNHGRKKVHPDDLNLDDYHPIDPVPSSKTS 238

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEH APLLPHMPNPPPP+QPGGYA
Sbjct: 239 VKPGPIEHGAPLLPHMPNPPPPSQPGGYA 267

[Close]

BLAST of Cmc07g0183451 vs. NCBI nr
Match: XP_011654147.1 (uncharacterized protein LOC105435309 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 6.2e-39
Identity = 81/89 (91.01%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALN HHVNA KCLSDI LNRKLKFQTDEH N GRKKVHP DLNLDDYHPIDPVPSSKTS
Sbjct: 34  IALNHHHVNANKCLSDILLNRKLKFQTDEHCNHGRKKVHPDDLNLDDYHPIDPVPSSKTS 93

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEH APLLPHMPNPPPP+QPGGYA
Sbjct: 94  VKPGPIEHGAPLLPHMPNPPPPSQPGGYA 122

[Close]

BLAST of Cmc07g0183451 vs. NCBI nr
Match: XP_038899330.1 (uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899332.1 uncharacterized protein LOC120086661 [Benincasa hispida])

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-38
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           +ALN HHVN  KCLSDIPLNRKLKFQTDEH +LGRKKVHPGDLNLDDYHPIDPVPSSKTS
Sbjct: 34  VALNNHHVNPNKCLSDIPLNRKLKFQTDEHYSLGRKKVHPGDLNLDDYHPIDPVPSSKTS 93

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEH APLLPHMPN PPP+QPG YA
Sbjct: 94  VKPGPIEHGAPLLPHMPNSPPPHQPGDYA 122

[Close]

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL
Match: A0A5A7VB21 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002820 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALNQHHVNAKKCLSD+PLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS
Sbjct: 5   IALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 64

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEHSAPLLPHMPNPPPPNQPGGYA
Sbjct: 65  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 93

[Close]

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL
Match: A0A1S3BV38 (uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALNQHHVNAKKCLSD+PLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS
Sbjct: 34  IALNQHHVNAKKCLSDMPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 93

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEHSAPLLPHMPNPPPPNQPGGYA
Sbjct: 94  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 122

[Close]

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL
Match: A0A0A0L2J3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642400 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 3.0e-39
Identity = 81/89 (91.01%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           IALN HHVNA KCLSDI LNRKLKFQTDEH N GRKKVHP DLNLDDYHPIDPVPSSKTS
Sbjct: 34  IALNHHHVNANKCLSDILLNRKLKFQTDEHCNHGRKKVHPDDLNLDDYHPIDPVPSSKTS 93

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEH APLLPHMPNPPPP+QPGGYA
Sbjct: 94  VKPGPIEHGAPLLPHMPNPPPPSQPGGYA 122

[Close]

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL
Match: A0A6J1IQK4 (uncharacterized protein LOC111477287 OS=Cucurbita maxima OX=3661 GN=LOC111477287 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.4e-33
Identity = 85/175 (48.57%), Postives = 96/175 (54.86%), Query Frame = 0


Query: 1   MLFHISTVVLNPPWTTIFEANTP------------------------------------W 60
           M FHIS+V+LNP WTT FE                                        W
Sbjct: 1   MPFHISSVLLNPSWTTSFEQGVSSFVSFSGHILVFKFLPSSFWACSAFRHFCIMKLSGFW 60

Query: 61  KW-------------------KKRVYIALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLG 120
            +                        +AL+ HHVN  +CLSD+P NRKLKFQTDEH++LG
Sbjct: 61  VFFLVLQTTLLLSCFPSHLNASSTSDMALSHHHVNPNECLSDLPFNRKLKFQTDEHNSLG 120

[Close]

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL
Match: A0A6J1FA15 (uncharacterized protein LOC111443464 OS=Cucurbita moschata OX=3662 GN=LOC111443464 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.2e-33
Identity = 70/89 (78.65%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 32  IALNQHHVNAKKCLSDIPLNRKLKFQTDEHSNLGRKKVHPGDLNLDDYHPIDPVPSSKTS 91
           +AL+ HHV+  +CLSDIP NRKLKFQTD+H++LG+KKVHPGDL LDDY  IDPVPSSKTS
Sbjct: 87  MALSHHHVSPNECLSDIPFNRKLKFQTDKHNSLGKKKVHPGDLKLDDYPTIDPVPSSKTS 146

Query: 92  VKPGPIEHSAPLLPHMPNPPPPNQPGGYA 121
           VKPGPIEH APLLPHMP PPPP+QPG YA
Sbjct: 147 VKPGPIEHGAPLLPHMPIPPPPDQPGDYA 175

[Close]

BLAST of Cmc07g0183451 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.3e-07
Identity = 23/42 (54.76%), Postives = 33/42 (78.57%), Query Frame = 0


Query: 74  LNLDDYH-PIDPVPSSKTSVKPGPIEHSAPLLPHMPNPPPPN 115
           + L+DY+ P+DP P++K S+KPGPIEH  PL P++P PP P+
Sbjct: 28  VGLEDYNFPVDPTPTTKASIKPGPIEHGTPLNPYIPKPPSPS 69

The following BLAST results are available for this feature:

BLAST of Cmc07g0183451 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452636.1	3.7e-44	98.88	PREDICTED: uncharacterized protein LOC103493595 [Cucumis melo]	[more]
KAA0064434.1	3.7e-44	98.88	uncharacterized protein E6C27_scaffold255G001460 [Cucumis melo var. makuwa] >TYK...	[more]
KAE8649878.1	6.2e-39	91.01	hypothetical protein Csa_012522 [Cucumis sativus]	[more]
XP_011654147.1	6.2e-39	91.01	uncharacterized protein LOC105435309 [Cucumis sativus]	[more]
XP_038899330.1	1.4e-38	88.76	uncharacterized protein LOC120086661 [Benincasa hispida] >XP_038899331.1 unchara...	[more]

BLAST of Cmc07g0183451 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc07g0183451 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VB21	1.8e-44	98.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BV38	1.8e-44	98.88	uncharacterized protein LOC103493595 OS=Cucumis melo OX=3656 GN=LOC103493595 PE=...	[more]
A0A0A0L2J3	3.0e-39	91.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642400 PE=4 SV=1	[more]
A0A6J1IQK4	1.4e-33	48.57	uncharacterized protein LOC111477287 OS=Cucurbita maxima OX=3661 GN=LOC111477287...	[more]
A0A6J1FA15	3.2e-33	78.65	uncharacterized protein LOC111443464 OS=Cucurbita moschata OX=3662 GN=LOC1114434...	[more]

BLAST of Cmc07g0183451 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01075.1	2.3e-07	54.76	Glycosyl hydrolase family 35 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..77
None	No IPR available	PANTHER	PTHR37249:SF3	BNAANNG14020D PROTEIN	coord: 34..116
None	No IPR available	PANTHER	PTHR37249	OS03G0206201 PROTEIN	coord: 34..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0183451.1	Cmc07g0183451.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane