Cmc07g0183071 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0183071
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 1745739 .. 1748191 (+)
RNA-Seq ExpressionCmc07g0183071
SyntenyCmc07g0183071
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGTCATTTGAAGCGGTAGATAGCAGATTTAAGACATTTTAATAAGAAAGACCAGACATTTGATATTATTGCAACAAAGCAAACTAGCTAAGAAAAAGTGTAAAATTGTCCCCCATGACAGAAATGACCTTCAAAACTTCAAACTAAATAAATCATCGACAGAAAAGATGCAAGTAATTTCATTGTCAGTAATTCGATGGTCATTGCTCCAACAAGAAGGTTTAGGCACACTGATTGCTTAAATCTCAGATATTACATAGAGCTACATATCTCAGAAATTTTAAGACACAATACATCACACACAAACGAGAGAAAAATAGAGAGAAGATGGTGGAAGTTACTTATGCATCAATATATGCATTTGTTTATCATTATCATTAAAATTTGAATGATATTGGAGAAGTACAAAACCTTCCCTAAATGCAACAATGGTATATACTTTCTGATCTAAGTGGCTTAAACTACATCCGGCTCTTATATTATGCAGGAACCAGAAGTCTAGTGCCACCAAATACATGTAGATATAATGCCAAACATATTGTAACAATAACAGAAGACTTTGCACAAAAGTATCTGATAACTTCCAATCCCCTACCCACAACTTCATCGTGCACTGTATCAAGACTTCTCTTCAGACCATCCATTAGTTTCCACAAGAAATATTCGACAACAGATCTTGTTGTTTCAAAGGTCACCCTACCAGTTAAATCAAGCACAAACTTCCTATTTCTAGGAACTGCCAGAGTAGATGAAACCGTGTCAACCCATCCATTTTGGCTACCCTCAGTTGAGCTGGCCAAAGCTATTTTCTTTGGATAGGTTCCTTCAGAAAAGGGTACATCTCCTATCTTCGACACTCCATTACAAGGTGAAACCGAACTCAAATTTGAAGTCGATCGCGAGCTTGTCAATACCTGATGAGATGATTTTACCAGAGTTTCCACAGCACCATTACAAACAGAAACAAGCATGTCCTTCACCTTGTCCTGATGGGTGGGATTGGTCAATCCACTAAATAGGTCATTGTACACATTAACATCCATTGTTTTATCAAGATACACACCAACTGCAGTGCTAACAAAAACTTGTATGCAATCTGCAATAACATTTTTGCATTTCTCATTGGAGGCCACAGTTACCCATCTGGGCACGTCTGGAAATTCAGATCCAGAATTGTCAATTTTCTGTGGATTCCCACTTGCATCATCAACTGATCCAGAGATCGAGTAATATCCCATGACCAAATTCCTTGCAAAGCTTCCAACCACAACAGAAGCAAAACCAGTCCCAGTAGTAGAAAATAGCTTCTCAACAATACCAGAAGAAAAACCCGAATTTGCCGAGTCCGCCTCGGAATTTTGTTGATTCTTTGTCACAGATTTATAACCTCTCATCATCCCAACCGTGAAAGCCTCAGTAACCTTTTCCAGAGACTCCGAAAACTCCCCAGACTTGGCAATTTTGGAAATTTGCTTCAAGCTGTTGGGAATTTGGTCAGAATCAGATTTCAGAAACTCCTTCAAGTCCTTAGAAATTACTCCAATAGCTTCAGAAGAATCCGCAACCATTTCAGCAACAGAAATCATGGCGCCAAAGAGCTTCATCAGTCTCCTCCTCTTCCTCTCGACAGAAGGCAAATGATAGACCTTGTAAGCACCATAACCCGAAACCCCCATGAGAGCCAATAGAATAAGCCACTTCTTTTTTCTCTGAGAGAATCCCAAACCCCTTCTAACCAGTTCAAAATCCATAGCAAGACTCAAAAAAACCCTAAATCCCAAATCAAACCGAACCCCAGATATGAAATTGAAAAGGGCGCAACACAGAACAAAGAGGGAGGAGAAAACTTGTTGGGTTTTCCCACTCGATGAACGAAACAGAAGAAACCCAATAAAAAAAACAGAATCGCAAACCTTTTCGGAGAAATTGTTGGAAGTCAATGAAGATTAAGGGGTCAAAGGTGGAAGATTTAACAAAATTTCTAAGAAAATGTTATTAGGTGACAAGTGGGAAGAGACACGGAAGAAATGATGATGGGTTGAACGAGCGTTGGAGTTCGGGATCCTCGTTACGATTAACGAATATGATACGATAACAAAGGAATCTGATTACGAAAGAAGAGAAATTTAAAGAAGAAGAATGAATGAATGGAAGGAGGAAGAGGAGTTCATGTTCGGGTCGGTTTTCCCATTACTACACGGAAACAACAAAATCGCAGATGGGAATGAAATGGCCAATCAGATTGAATTCAACTTCCCCACAAAACGAACCATTGGGTTTAAATTATGGTATTATTATTTTATACTTCTTCACATTTTTGATAGATTCAAAGTCCACGTAAGTTAGATAAATCTTTTAACTAATTTTAAAACATTTACAATTAATTCTTTATTCACTGATTTATATATTTTGTTTTTATAATTTTTTTAGAGATGTTCATTGATCTCAATTT

mRNA sequence

TTGGTCATTTGAAGCGGTAGATAGCAGATTTAAGACATTTTAATAAGAAAGACCAGACATTTGATATTATTGCAACAAAGCAAACTAGCTAAGAAAAAGTGTAAAATTGTCCCCCATGACAGAAATGACCTTCAAAACTTCAAACTAAATAAATCATCGACAGAAAAGATGCAAGTAATTTCATTGTCAGTAATTCGATGGTCATTGCTCCAACAAGAAGGTTTAGGCACACTGATTGCTTAAATCTCAGATATTACATAGAGCTACATATCTCAGAAATTTTAAGACACAATACATCACACACAAACGAGAGAAAAATAGAGAGAAGATGGTGGAAGTTACTTATGCATCAATATATGCATTTGTTTATCATTATCATTAAAATTTGAATGATATTGGAGAAGTACAAAACCTTCCCTAAATGCAACAATGGTATATACTTTCTGATCTAAGTGGCTTAAACTACATCCGGCTCTTATATTATGCAGGAACCAGAAGTCTAGTGCCACCAAATACATGTAGATATAATGCCAAACATATTGTAACAATAACAGAAGACTTTGCACAAAAGTATCTGATAACTTCCAATCCCCTACCCACAACTTCATCGTGCACTGTATCAAGACTTCTCTTCAGACCATCCATTAGTTTCCACAAGAAATATTCGACAACAGATCTTGTTGTTTCAAAGGTCACCCTACCAGTTAAATCAAGCACAAACTTCCTATTTCTAGGAACTGCCAGAGTAGATGAAACCGTGTCAACCCATCCATTTTGGCTACCCTCAGTTGAGCTGGCCAAAGCTATTTTCTTTGGATAGGTTCCTTCAGAAAAGGGTACATCTCCTATCTTCGACACTCCATTACAAGGTGAAACCGAACTCAAATTTGAAGTCGATCGCGAGCTTGTCAATACCTGATGAGATGATTTTACCAGAGTTTCCACAGCACCATTACAAACAGAAACAAGCATGTCCTTCACCTTGTCCTGATGGGTGGGATTGGTCAATCCACTAAATAGGTCATTGTACACATTAACATCCATTGTTTTATCAAGATACACACCAACTGCAGTGCTAACAAAAACTTGTATGCAATCTGCAATAACATTTTTGCATTTCTCATTGGAGGCCACAGTTACCCATCTGGGCACGTCTGGAAATTCAGATCCAGAATTGTCAATTTTCTGTGGATTCCCACTTGCATCATCAACTGATCCAGAGATCGAGTAATATCCCATGACCAAATTCCTTGCAAAGCTTCCAACCACAACAGAAGCAAAACCAGTCCCAGTAGTAGAAAATAGCTTCTCAACAATACCAGAAGAAAAACCCGAATTTGCCGAGTCCGCCTCGGAATTTTGTTGATTCTTTGTCACAGATTTATAACCTCTCATCATCCCAACCGTGAAAGCCTCAGTAACCTTTTCCAGAGACTCCGAAAACTCCCCAGACTTGGCAATTTTGGAAATTTGCTTCAAGCTGTTGGGAATTTGGTCAGAATCAGATTTCAGAAACTCCTTCAAGTCCTTAGAAATTACTCCAATAGCTTCAGAAGAATCCGCAACCATTTCAGCAACAGAAATCATGGCGCCAAAGAGCTTCATCAGTCTCCTCCTCTTCCTCTCGACAGAAGGCAAATGATAGACCTTGTAAGCACCATAACCCGAAACCCCCATGAGAGCCAATAGAATAAGCCACTTCTTTTTTCTCTGAGAGAATCCCAAACCCCTTCTAACCAGTTCAAAATCCATAGCAAGACTCAAAAAAACCCTAAATCCCAAATCAAACCGAACCCCAGATATGAAATTGAAAAGGGCGCAACACAGAACAAAGAGGGAGGAGAAAACTTGTTGGGTTTTCCCACTCGATGAACGAAACAGAAGAAACCCAATAAAAAAAACAGAATCGCAAACCTTTTCGGAGAAATTGTTGGAAGTCAATGAAGATTAAGGGGTCAAAGGTGGAAGATTTAACAAAATTTCTAAGAAAATGTTATTAGGTGACAAGTGGGAAGAGACACGGAAGAAATGATGATGGGTTGAACGAGCGTTGGAGTTCGGGATCCTCGTTACGATTAACGAATATGATACGATAACAAAGGAATCTGATTACGAAAGAAGAGAAATTTAAAGAAGAAGAATGAATGAATGGAAGGAGGAAGAGGAGTTCATGTTCGGGTCGGTTTTCCCATTACTACACGGAAACAACAAAATCGCAGATGGGAATGAAATGGCCAATCAGATTGAATTCAACTTCCCCACAAAACGAACCATTGGGTTTAAATTATGGTATTATTATTTTATACTTCTTCACATTTTTGATAGATTCAAAGTCCACGTAAGTTAGATAAATCTTTTAACTAATTTTAAAACATTTACAATTAATTCTTTATTCACTGATTTATATATTTTGTTTTTATAATTTTTTTAGAGATGTTCATTGATCTCAATTT

Coding sequence (CDS)

ATGCAACAATGGTATATACTTTCTGATCTAAGTGGCTTAAACTACATCCGGCTCTTATATTATGCAGGAACCAGAAGTCTAGTGCCACCAAATACATGTAGATATAATGCCAAACATATTGTAACAATAACAGAAGACTTTGCACAAAAGTATCTGATAACTTCCAATCCCCTACCCACAACTTCATCGTGCACTGTATCAAGACTTCTCTTCAGACCATCCATTAGTTTCCACAAGAAATATTCGACAACAGATCTTGTTGTTTCAAAGGTCACCCTACCAGTTAAATCAAGCACAAACTTCCTATTTCTAGGAACTGCCAGAGTAGATGAAACCGTGTCAACCCATCCATTTTGGCTACCCTCAGTTGAGCTGGCCAAAGCTATTTTCTTTGGATAG

Protein sequence

MQQWYILSDLSGLNYIRLLYYAGTRSLVPPNTCRYNAKHIVTITEDFAQKYLITSNPLPTTSSCTVSRLLFRPSISFHKKYSTTDLVVSKVTLPVKSSTNFLFLGTARVDETVSTHPFWLPSVELAKAIFFG
Homology
[Close]
BLAST of Cmc07g0183071 vs. NCBI nr
Match: KAF3588307.1 (hypothetical protein F2Q69_00026246 [Brassica cretica])

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-05
Identity = 35/65 (53.85%), Postives = 39/65 (60.00%), Query Frame = 0 

Query: 34  RYNAKHIVTITEDFAQKYLITSNPLPTTSSCTVSRLLFRPSISFHKKYSTTDLVVSKVTL 93
           +YNA+H VTITED A  YL T  PL  TSS T S+LL   S  F       DL VS VTL
Sbjct: 218 KYNARHNVTITEDLAPTYLTTCRPLSVTSSLTTSKLLLNHSSIFIIMNPMIDLAVSSVTL 277

Query: 94  PVKSS 99
           PV S+
Sbjct: 278 PVTSN 282

[Close]
BLAST of Cmc07g0183071 vs. ExPASy TrEMBL
Match: A0A0A9JVC5 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.1e-05
Identity = 34/81 (41.98%), Postives = 46/81 (56.79%), Query Frame = 0 

Query: 33  CRYNAKHIVTITEDFAQKYLITSNPLPTTSSCTVSRLLFRPSISFHKKYSTTDLVVSKVT 92
           C +NA+ +V +  D A +YL  ++PL  TS    + L   PS +   + S  D  VS VT
Sbjct: 2   CMHNAREMVKMAMDLAPRYLTATSPLSATSLRATTMLFLAPSETRCARKSRNDRTVSAVT 61

Query: 93  LPVKSSTNFLFLGTARVDETV 114
           LPV SSTN   LGTA V +T+
Sbjct: 62  LPVTSSTNLRLLGTASVLDTL 82

The following BLAST results are available for this feature:
BLAST of Cmc07g0183071 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3588307.11.3e-0553.85hypothetical protein F2Q69_00026246 [Brassica cretica][more]
BLAST of Cmc07g0183071 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0183071 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A9JVC51.1e-0541.98Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
BLAST of Cmc07g0183071 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0183071.1Cmc07g0183071.1mRNA