Cmc07g0182841 (gene) Melon (Charmono) v1.1

Overview
NameCmc07g0182841
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr07: 1579062 .. 1581248 (+)
RNA-Seq ExpressionCmc07g0182841
SyntenyCmc07g0182841
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTATAGATTGCGGATTATACAATTTAGCACCCAAATAAAGTAAATAACAAATATATATATATATATATATAATAAAATAAACCCAAGTGGGTTCCACTCTCCATCTTAATTAACACATAAAATTAAAAAACTTTTTTTTTTGTTTCAAGATAAGGACTGCCTCCCTGAGTTGGTGAGTAAATTTGAAGCTTCAATTTCCAGGTCACAACCTTATCTGTTTATCTCCTTCCATTATCCCATTTCTTAATTTTCATTGACATAAACGAACACAAGACACCAAATTCAGATTCTTGTCGGAGTTTAATTAGTCAACTTGGGAATTTAATCAGGAGACAAAAGAAGAAGATTTTTACATATTTTTTCTTTTTTCGTTTTTTACTGGAAATCTGAAAATATCATATTACAATTTTAAATTAAATCAAAGCCCAGCCGACAACAACCTTCCTTATGTACCCTTACTTACTTCTCGGCAGCCTAAAAATCCCGTCTTTTCATATCTACAATAAAAACAGAGTAATTCTTTTCTCCTAATTAAATTTAAATACAATTGTAAAATAAACGCTGAAAATTCCACAAACCCACCACCAAAATATGTATTCACAAACAAACCCCAAAAAGGCCACCGATTGATCAAGTTTCCTTCTTCTTCTTTTTTTCTTTTTGAACCCATTTCTCACATTAATAGCTCCGAAACCCATCCGACATCGGGTGTCAATGTCGAATCCATCTCCTTCACAGAGTTGTCTTTGCTGAGTTTCGCATACATTTGAGCTCTTAAGTCTCTCCCAGATTCCACTCTCTCCATTGCAGGTTCTTCCTCGTAATTCTTCCCCCATAATTCGTAATTTCCGGTGGTTGGAGTTGACGGTAAGTTGTACAAACCAGAGCCGGAGGGAGAGAGAGGGTTTTGTGATCCTAATTGAATCCTTCCCCAATGAGGACCGGTTGCTTTTAATTTCCCAAGTTGAAGATTGCGCATACACGAGACCAATCCATTCATTGAATTAAACGGACAATTCGGAGATAGGGGTGGTGAGTCAGAAGGCGGAGATACAGGCGGCGTTGATAGAATTGAAGTGGGTGAAGTCACAAATGACCCTTTACTAAAATATGAATCGAATGCATGTGCAACTCGTGATGACCCATCAACGGAATCAGCCGAAACAGGGGTTCTCGGACTCTGCTGCGGCAGAACCCGAAGCTGTTCCGGCGTGTGCGCGAAAAAACAGACACGACGGCGACAAGCTAACCCATCCTTACACGGCTGAGTCCGATACCGAGCTGGATGAAGCCAACACTCAAATATCCCATGAGCAAAATCACAAGAATCCCCTTTCTTACAATTTCCTTTTCGAAACTCCGGACAAGCCGTACCGGAGTAATGATACTTCCTCGGGTCACGCCGTCGAGCTTTCTCACCAGGATGCGCGTACGGACACTCTGTCCAATCGTGCGACCTCCCACGTGCACATCTCCGGATTTTGAACTCAAACATCCGAAAATGATCGCAGGAAAAACCGTCCACCGCCTCTCCCACCCCATCCAATTCATCAGAATCCGCCGCAGAGGGTAGGTACCGGTGAATGGAGGAAAAAGAGTCGATGAATGAATCGACCCCACCGGCAACGAAAACCGGCGAGGAAACTCCGGTTATATGATGGTCTTCAAGTGGGTCCCAAGGAGGAACTTGAATGGTGTGGTTGAATCTAGATTGTTCTCCGATCATCATCTTGGAGCCGAGTGGTGTGAATGAAGAATGAAAAAGATCGGCTGCGGATTTATAAATGATAAACCCAAGTAAAGGAAAGAGAAGAGTTAAGTTTTTAACCGTGGTTCGGTTAAAATATTAATCACACAAAACGTCAATAAAGTCCAATACTACCCCACCGTTTTAAAACAGTCCCACTGATTTAATTCTTAAAATGACAATTTGGTCCTTTTTCCTTTTAACAATTCGTATTTATTTTCTTAATTCAAAATTAATTTAATCTAAAAGCGAATATTAGATTGGTAATTAATTAAATTGTTAATAATGGGGTTATTTTGGAAGTTGTCTTAATTAAAGTAGTTGTAAAAGAGAAAGGGAGTAGGTAAATATAATTAATATTTACCCGATGGGAAGGAAGAGGTGTTGTTTTAGGTACTAATAACCTATTTGTCTACTTTTAGGTTTCATAAAAGCAA

mRNA sequence

TCTTTATAGATTGCGGATTATACAATTTAGCACCCAAATAAAGTAAATAACAAATATATATATATATATATATAATAAAATAAACCCAAGTGGGTTCCACTCTCCATCTTAATTAACACATAAAATTAAAAAACTTTTTTTTTTGTTTCAAGATAAGGACTGCCTCCCTGAGTTGGTGAGTAAATTTGAAGCTTCAATTTCCAGGTCACAACCTTATCTGTTTATCTCCTTCCATTATCCCATTTCTTAATTTTCATTGACATAAACGAACACAAGACACCAAATTCAGATTCTTGTCGGAGTTTAATTAGTCAACTTGGGAATTTAATCAGGAGACAAAAGAAGAAGATTTTTACATATTTTTTCTTTTTTCGTTTTTTACTGGAAATCTGAAAATATCATATTACAATTTTAAATTAAATCAAAGCCCAGCCGACAACAACCTTCCTTATGTACCCTTACTTACTTCTCGGCAGCCTAAAAATCCCGTCTTTTCATATCTACAATAAAAACAGAGTAATTCTTTTCTCCTAATTAAATTTAAATACAATTGTAAAATAAACGCTGAAAATTCCACAAACCCACCACCAAAATATGTATTCACAAACAAACCCCAAAAAGGCCACCGATTGATCAAGTTTCCTTCTTCTTCTTTTTTTCTTTTTGAACCCATTTCTCACATTAATAGCTCCGAAACCCATCCGACATCGGGTGTCAATGTCGAATCCATCTCCTTCACAGAGTTGTCTTTGCTGAGTTTCGCATACATTTGAGCTCTTAAGTCTCTCCCAGATTCCACTCTCTCCATTGCAGGTTCTTCCTCGTAATTCTTCCCCCATAATTCGTAATTTCCGGTGGTTGGAGTTGACGGTAAGTTGTACAAACCAGAGCCGGAGGGAGAGAGAGGGTTTTGTGATCCTAATTGAATCCTTCCCCAATGAGGACCGGTTGCTTTTAATTTCCCAAGTTGAAGATTGCGCATACACGAGACCAATCCATTCATTGAATTAAACGGACAATTCGGAGATAGGGGTGGTGAGTCAGAAGGCGGAGATACAGGCGGCGTTGATAGAATTGAAGTGGGTGAAGTCACAAATGACCCTTTACTAAAATATGAATCGAATGCATGTGCAACTCGTGATGACCCATCAACGGAATCAGCCGAAACAGGGGTTCTCGGACTCTGCTGCGGCAGAACCCGAAGCTGTTCCGGCGTGTGCGCGAAAAAACAGACACGACGGCGACAAGCTAACCCATCCTTACACGGCTGAGTCCGATACCGAGCTGGATGAAGCCAACACTCAAATATCCCATGAGCAAAATCACAAGAATCCCCTTTCTTACAATTTCCTTTTCGAAACTCCGGACAAGCCGTACCGGAGTAATGATACTTCCTCGGGTCACGCCGTCGAGCTTTCTCACCAGGATGCGCGTACGGACACTCTGTCCAATCGTGCGACCTCCCACGTGCACATCTCCGGATTTTGAACTCAAACATCCGAAAATGATCGCAGGAAAAACCGTCCACCGCCTCTCCCACCCCATCCAATTCATCAGAATCCGCCGCAGAGGGTAGGTACCGGTGAATGGAGGAAAAAGAGTCGATGAATGAATCGACCCCACCGGCAACGAAAACCGGCGAGGAAACTCCGGTTATATGATGGTCTTCAAGTGGGTCCCAAGGAGGAACTTGAATGGTGTGGTTGAATCTAGATTGTTCTCCGATCATCATCTTGGAGCCGAGTGGTGTGAATGAAGAATGAAAAAGATCGGCTGCGGATTTATAAATGATAAACCCAAGTAAAGGAAAGAGAAGAGTTAAGTTTTTAACCGTGGTTCGGTTAAAATATTAATCACACAAAACGTCAATAAAGTCCAATACTACCCCACCGTTTTAAAACAGTCCCACTGATTTAATTCTTAAAATGACAATTTGGTCCTTTTTCCTTTTAACAATTCGTATTTATTTTCTTAATTCAAAATTAATTTAATCTAAAAGCGAATATTAGATTGGTAATTAATTAAATTGTTAATAATGGGGTTATTTTGGAAGTTGTCTTAATTAAAGTAGTTGTAAAAGAGAAAGGGAGTAGGTAAATATAATTAATATTTACCCGATGGGAAGGAAGAGGTGTTGTTTTAGGTACTAATAACCTATTTGTCTACTTTTAGGTTTCATAAAAGCAA

Coding sequence (CDS)

ATGAATCGAATGCATGTGCAACTCGTGATGACCCATCAACGGAATCAGCCGAAACAGGGGTTCTCGGACTCTGCTGCGGCAGAACCCGAAGCTGTTCCGGCGTGTGCGCGAAAAAACAGACACGACGGCGACAAGCTAACCCATCCTTACACGGCTGAGTCCGATACCGAGCTGGATGAAGCCAACACTCAAATATCCCATGAGCAAAATCACAAGAATCCCCTTTCTTACAATTTCCTTTTCGAAACTCCGGACAAGCCGTACCGGAGTAATGATACTTCCTCGGGTCACGCCGTCGAGCTTTCTCACCAGGATGCGCGTACGGACACTCTGTCCAATCGTGCGACCTCCCACGTGCACATCTCCGGATTTTGA

Protein sequence

MNRMHVQLVMTHQRNQPKQGFSDSAAAEPEAVPACARKNRHDGDKLTHPYTAESDTELDEANTQISHEQNHKNPLSYNFLFETPDKPYRSNDTSSGHAVELSHQDARTDTLSNRATSHVHISGF
Homology
[Close]
BLAST of Cmc07g0182841 vs. NCBI nr
Match: KAG0486787.1 (hypothetical protein HPP92_008882 [Vanilla planifolia])

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-09
Identity = 49/107 (45.79%), Postives = 62/107 (57.94%), Query Frame = 0 

Query: 12  HQRNQPKQGFSDSA--AAEPEAVPACARKNRHDGDKLTHPYTAESDTELDEANTQISHEQ 71
           ++R  P    S +A  +A  EAV AC RK++  G  L  P TA  DT   EAN++   E+
Sbjct: 31  NRRKNPPLLVSSAAGYSAVHEAVRACGRKSKRAGGMLCRPCTAAFDTVPGEANSRTLRER 90

Query: 72  NHKNPLSYNFLFETPDKPYRSNDTSSGHAVELSHQDARTDTLSNRAT 117
            H+ P S + L E   K Y+SN+TSS  A E SHQD RT T SNRAT
Sbjct: 91  THRRPPSCSALCENRSKMYQSNNTSSDLAAEPSHQDERTGTRSNRAT 137

The following BLAST results are available for this feature:
BLAST of Cmc07g0182841 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG0486787.11.8e-0945.79hypothetical protein HPP92_008882 [Vanilla planifolia][more]
BLAST of Cmc07g0182841 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0182841 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc07g0182841 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc07g0182841.1Cmc07g0182841.1mRNA