Cmc07g0180621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc07g0180621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-H2 finger protein ATL80
Location	CMiso1.1chr07: 245623 .. 246180 (-)
RNA-Seq Expression	Cmc07g0180621
Synteny	Cmc07g0180621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAATTCCTCCGCCACCTCCGATACCTTCGAGCCTAGGTATGACTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTGCGCTTTGATTTGCGTCCTCGGTCTTGTTGCGGTTGCCCGCTGCGCCTGGCTACGACACCTTGCTGGTGATGGTGCTGGCGCTGGTTCCACTCGTCCTCCCCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTAAGGTCTCTTCCCAAGTACACTTTCACTGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGTGTGCTGCCGCAGTGTGGCCATGGATTTCACGTGTCCTGCATCGATACCTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGCCGTCAGATTCTGGTTGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCCAGTTCGAACGGCGGAACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGGTTCTTACCTTAG

mRNA sequence

ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAATTCCTCCGCCACCTCCGATACCTTCGAGCCTAGGTATGACTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTGCGCTTTGATTTGCGTCCTCGGTCTTGTTGCGGTTGCCCGCTGCGCCTGGCTACGACACCTTGCTGGTGATGGTGCTGGCGCTGGTTCCACTCGTCCTCCCCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTAAGGTCTCTTCCCAAGTACACTTTCACTGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGTGTGCTGCCGCAGTGTGGCCATGGATTTCACGTGTCCTGCATCGATACCTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGCCGTCAGATTCTGGTTGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCCAGTTCGAACGGCGGAACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGGTTCTTACCTTAG

Coding sequence (CDS)

ATGCGTCCCTTCAGGTACCTTGCCGGCGTCAATTCCTCCGCCACCTCCGATACCTTCGAGCCTAGGTATGACTCTGACTTCGTCATAATCCTCGCCGCCCTCCTCTGCGCTTTGATTTGCGTCCTCGGTCTTGTTGCGGTTGCCCGCTGCGCCTGGCTACGACACCTTGCTGGTGATGGTGCTGGCGCTGGTTCCACTCGTCCTCCCCCGCCTCCTGCCTCCAACAAAGGTCTCAAGAAGAAGATCCTAAGGTCTCTTCCCAAGTACACTTTCACTGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATCCGTGTGCTGCCGCAGTGTGGCCATGGATTTCACGTGTCCTGCATCGATACCTGGTTCCGATCTCACTCTTCCTGTCCTTCCTGCCGTCAGATTCTGGTTGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCGAGCTCCAGTTCGAACGGCGGAACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAATAGGTTCTTACCTTAG

Protein sequence

MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP

Homology

[Close]

BLAST of Cmc07g0180621 vs. NCBI nr
Match: XP_008453009.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK19932.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 379.8 bits (974), Expect = 1.3e-101
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60
           MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG
Sbjct: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60

Query: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120
           AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ
Sbjct: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120

Query: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180
           CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT
Sbjct: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180

Query: 181 NRFLP 186
           NRFLP
Sbjct: 181 NRFLP 185

[Close]

BLAST of Cmc07g0180621 vs. NCBI nr
Match: XP_004145558.1 (RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein Csa_012171 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 8.7e-101
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60
           MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG
Sbjct: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60

Query: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120
            GAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ
Sbjct: 61  GGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120

Query: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180
           CGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT
Sbjct: 121 CGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180

Query: 181 NRFLP 186
           NRFLP
Sbjct: 181 NRFLP 185

[Close]

BLAST of Cmc07g0180621 vs. NCBI nr
Match: KAG6608649.1 (RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037966.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.5 bits (898), Expect = 8.8e-93
Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120
           G GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSSNGGTESRVK+EG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 186
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Cmc07g0180621 vs. NCBI nr
Match: XP_022941514.1 (RING-H2 finger protein ATL80-like [Cucurbita moschata])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120
           G GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK+EG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 186
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Cmc07g0180621 vs. NCBI nr
Match: XP_023523429.1 (RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120
             GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  RGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK+EG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 186
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.6e-55
Identity = 117/192 (60.94%), Postives = 143/192 (74.48%), Query Frame = 0


Query: 4   FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGA 63
           FR L   N+ S   D      +SD V+ILAALLCALICVLGL+AV+RC WLR L AG+  
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  GAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--SAQFSDCAICLAEFAVGDEIR 123
            +GS T+ P PP  A+NKGLKKK+L+SLPK TF+ E   S +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK--- 183
           VLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGDDKTNRFLP 186
           ++G+D  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-54
Identity = 105/180 (58.33%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 4   FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGA 63
           FR L   NS++ ++   P ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +
Sbjct: 6   FRLLQEANSTSPAEA-SPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNR-S 65

Query: 64  GSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSDCAICLAEFAVGDEIRVLPQC 123
             T PPP  A+NKGLKKK+LRSLPK T++ +   + +  +CAICL EFA GDE+RVLPQC
Sbjct: 66  DQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQC 125

Query: 124 GHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN 182
           GHGFHVSCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Sbjct: 126 GHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDN 183

[Close]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.2e-37
Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 24  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKGLKKKIL 83
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 84  RSLPKYTFTAEFSA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 143
           ++LPK T+TA  S                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 144 SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE 176
           +CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTA------ETQVKDQ 180

[Close]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 82/170 (48.24%), Postives = 99/170 (58.24%), Query Frame = 0


Query: 24  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKGLKKKIL 83
           +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGG---------DSPSPNKGLKKKAL 84

Query: 84  RSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFR 143
           +SLP+ TFTA  S           ++CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 144 SHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP 186
           S SSCPSCR+IL   +C +CG    +   +     +  +        FLP
Sbjct: 145 SRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQHSSTTIPTFLP 185

[Close]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-25
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 18  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKG 77
           T +  +D++ VIILAALLCALI  LGL ++ RCA        G G  S+      A   G
Sbjct: 25  TRDMNFDANMVIILAALLCALILALGLNSILRCA-----MRCGFGLSSSAAAGTVADRAG 84

Query: 78  LKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFRS 137
           LKK+ L+  P   + + E     ++CAICL EFA G+ +RVLP C H FH+SCIDTW  S
Sbjct: 85  LKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVS 144

Query: 138 HSSCPSCRQILV 149
           HSSCP+CR  L+
Sbjct: 145 HSSCPNCRHSLI 151

[Close]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL
Match: A0A5A7VGL3 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00440 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60
           MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG
Sbjct: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60

Query: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120
           AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ
Sbjct: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120

Query: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180
           CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT
Sbjct: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180

Query: 181 NRFLP 186
           NRFLP
Sbjct: 181 NRFLP 185

[Close]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL
Match: A0A1S3BWC1 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60
           MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG
Sbjct: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60

Query: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120
           AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ
Sbjct: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120

Query: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180
           CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT
Sbjct: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180

Query: 181 NRFLP 186
           NRFLP
Sbjct: 181 NRFLP 185

[Close]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL
Match: A0A0A0L5Y2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.2e-101
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60
           MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG
Sbjct: 1   MRPFRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDG 60

Query: 61  AGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120
            GAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ
Sbjct: 61  GGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLPQ 120

Query: 121 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180
           CGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT
Sbjct: 121 CGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKT 180

Query: 181 NRFLP 186
           NRFLP
Sbjct: 181 NRFLP 185

[Close]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL
Match: A0A6J1FNK0 (RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-93
Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120
           G GA STRPPPPPASNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK+EG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 186
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL
Match: A0A6J1FA06 (RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111443637 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-93
Identity = 173/186 (93.01%), Postives = 178/186 (95.70%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSATSDTFEPR-YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SD+ EP+ YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAG+
Sbjct: 1   MRPFRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGN 60

Query: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120
            +G  STRPPPPPASNKGLKKKILRSLPKY FTAEFSAQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  VSGGASTRPPPPPASNKGLKKKILRSLPKYNFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180
           QCGHGFHVSCID WFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK
Sbjct: 121 QCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 186
           T+RFLP
Sbjct: 181 TSRFLP 186

[Close]

BLAST of Cmc07g0180621 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 1.8e-56
Identity = 117/192 (60.94%), Postives = 143/192 (74.48%), Query Frame = 0


Query: 4   FRYLAGVNS-SATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHL-AGDGA 63
           FR L   N+ S   D      +SD V+ILAALLCALICVLGL+AV+RC WLR L AG+  
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  GAGS-TRPPPPP--ASNKGLKKKILRSLPKYTFTAEF--SAQFSDCAICLAEFAVGDEIR 123
            +GS T+ P PP  A+NKGLKKK+L+SLPK TF+ E   S +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK--- 183
           VLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGDDKTNRFLP 186
           ++G+D  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Cmc07g0180621 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 105/180 (58.33%), Postives = 133/180 (73.89%), Query Frame = 0


Query: 4   FRYLAGVNSSATSDTFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGA 63
           FR L   NS++ ++   P ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A     +
Sbjct: 6   FRLLQEANSTSPAEA-SPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNR-S 65

Query: 64  GSTRPPPPPASNKGLKKKILRSLPKYTFTAEF--SAQFSDCAICLAEFAVGDEIRVLPQC 123
             T PPP  A+NKGLKKK+LRSLPK T++ +   + +  +CAICL EFA GDE+RVLPQC
Sbjct: 66  DQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQC 125

Query: 124 GHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTN 182
           GHGFHVSCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K+  D   N
Sbjct: 126 GHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDN 183

[Close]

BLAST of Cmc07g0180621 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 156.4 bits (394), Expect = 2.3e-38
Identity = 82/168 (48.81%), Postives = 107/168 (63.69%), Query Frame = 0


Query: 24  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKGLKKKIL 83
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G    A    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 84  RSLPKYTFTAEFSA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 143
           ++LPK T+TA  S                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 144 SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEE 176
           +CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTA------ETQVKDQ 180

[Close]

BLAST of Cmc07g0180621 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 151.0 bits (380), Expect = 9.5e-37
Identity = 82/170 (48.24%), Postives = 99/170 (58.24%), Query Frame = 0


Query: 24  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKGLKKKIL 83
           +SD V+IL+ALLCALICV GL AV RCAWLR     G           P+ NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGG---------DSPSPNKGLKKKAL 84

Query: 84  RSLPKYTFTAEFS--------AQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFR 143
           +SLP+ TFTA  S           ++CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 144 SHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTNRFLP 186
           S SSCPSCR+IL   +C +CG    +   +     +  +        FLP
Sbjct: 145 SRSSCPSCRRILTPVRCDRCGHASTAEMKDQAHRHQHHQHSSTTIPTFLP 185

[Close]

BLAST of Cmc07g0180621 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.4e-26
Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0


Query: 18  TFEPRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDGAGAGSTRPPPPPASNKG 77
           T +  +D++ VIILAALLCALI  LGL ++ RCA        G G  S+      A   G
Sbjct: 25  TRDMNFDANMVIILAALLCALILALGLNSILRCA-----MRCGFGLSSSAAAGTVADRAG 84

Query: 78  LKKKILRSLPKYTF-TAEFSAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFRS 137
           LKK+ L+  P   + + E     ++CAICL EFA G+ +RVLP C H FH+SCIDTW  S
Sbjct: 85  LKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVS 144

Query: 138 HSSCPSCRQILV 149
           HSSCP+CR  L+
Sbjct: 145 HSSCPNCRHSLI 151

The following BLAST results are available for this feature:

BLAST of Cmc07g0180621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453009.1	1.3e-101	100.00	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 fin...	[more]
XP_004145558.1	8.7e-101	98.92	RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein C...	[more]
KAG6608649.1	8.8e-93	92.47	RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022941514.1	1.1e-92	92.47	RING-H2 finger protein ATL80-like [Cucurbita moschata]	[more]
XP_023523429.1	1.1e-92	92.47	RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc07g0180621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	2.6e-55	60.94	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	2.2e-54	58.33	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	3.2e-37	48.81	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	1.3e-35	48.24	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LZV8	4.8e-25	47.73	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]

BLAST of Cmc07g0180621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGL3	6.5e-102	100.00	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BWC1	6.5e-102	100.00	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1	[more]
A0A0A0L5Y2	4.2e-101	98.92	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 P...	[more]
A0A6J1FNK0	5.5e-93	92.47	RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 ...	[more]
A0A6J1FA06	5.5e-93	93.01	RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111443637 ...	[more]

BLAST of Cmc07g0180621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	1.8e-56	60.94	RING/U-box superfamily protein	[more]
AT1G76410.1	1.6e-55	58.33	RING/U-box superfamily protein	[more]
AT4G35480.1	2.3e-38	48.81	RING-H2 finger A3B	[more]
AT2G17450.1	9.5e-37	48.24	RING-H2 finger A3A	[more]
AT5G01880.1	3.4e-26	47.73	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 102..143 e-value: 7.6E-8 score: 42.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 101..144 e-value: 2.0E-14 score: 53.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 102..144 score: 12.489278
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 71..148 e-value: 6.3E-22 score: 79.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 159..185
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..178
None	No IPR available	PANTHER	PTHR45798:SF59	RING-H2 FINGER PROTEIN ATL8	coord: 2..178
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 101..144 e-value: 1.33567E-17 score: 70.4085
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc07g0180621.1	Cmc07g0180621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane