Cmc06g0180061 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0180061
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RING-H2 finger protein ATL80
Location	CMiso1.1chr06: 36033884 .. 36034784 (+)
RNA-Seq Expression	Cmc06g0180061
Synteny	Cmc06g0180061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTCCCTCAAAGAAAGAAAGAAAGAAAGAAACCCTCATTACAATATTACTTAACACTCACTGCTCCATCCTCAATCCCCAATCCCTTCTCTTCTCAACCTTCTGTCTCATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCACCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGGAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCAATCTGCCTGGCGGAGTTCCTGGAGGGGGAGGAGATCCGACAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTGACAACAACGTGGAAGAGGAAGTGGAAGATAACAACAACGACAACAGGGGTTTGGGATTTTTGCCTTGACTTAACAAACCTTATAAGCTTCACTTCACTCTCTCTATTTCTTTCTGTTTCATCACAAACCAGCAAGAGTCAGTTCTCTGTGAATTCTTTTTTTTCTTATTATTTTTTTTTTTAAAAAAAATACAAAAACAAATCTTGACTTTGGATGTTAAAAAAAATCCCTCCATTAAAAAAATCTTCACTTGTAAATTCTAAATTCTATATTGCCAGTAGCTTCATCCATTTCACTGCCTTTCATGCTGTCTCTGATGATG

mRNA sequence

CTTTTCCCTCAAAGAAAGAAAGAAAGAAAGAAACCCTCATTACAATATTACTTAACACTCACTGCTCCATCCTCAATCCCCAATCCCTTCTCTTCTCAACCTTCTGTCTCATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCACCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGGAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCAATCTGCCTGGCGGAGTTCCTGGAGGGGGAGGAGATCCGACAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTGACAACAACGTGGAAGAGGAAGTGGAAGATAACAACAACGACAACAGGGGTTTGGGATTTTTGCCTTGACTTAACAAACCTTATAAGCTTCACTTCACTCTCTCTATTTCTTTCTGTTTCATCACAAACCAGCAAGAGTCAGTTCTCTGTGAATTCTTTTTTTTCTTATTATTTTTTTTTTTAAAAAAAATACAAAAACAAATCTTGACTTTGGATGTTAAAAAAAATCCCTCCATTAAAAAAATCTTCACTTGTAAATTCTAAATTCTATATTGCCAGTAGCTTCATCCATTTCACTGCCTTTCATGCTGTCTCTGATGATG

Coding sequence (CDS)

ATGTCTCCCTATATCAGAGCTCTCACCGCGAATACTTCGTCGGCGCCTCCACCGGAAGCGGTGGCCTTGGAGTCGGACTTCGTGGTCATTCTGGCGGCTTTGCTCTGTGCCCTAATTTGTATGGTAGGGCTGATAGCGGTGGCTCGGTGCGCCTGGCTCCGCCGTGGGAATCAGGCGTCGGCGAATAGAGGACTGAAGAAGAAGATACTGCAGTCGCTCCCGAAATTCAGGTACAAGTCGACGGTGGGAGATGGGAAAATAGCGGCGGAATGTGCAATCTGCCTGGCGGAGTTCCTGGAGGGGGAGGAGATCCGACAGTTGCCGCAGTGCGGGCATTGCTTCCACGTCAGCTGCGTAGACACGTGGCTAGGTACCCACTCCTCCTGCCCTTCTTGCCGTCAGATTCTGGTAGTGGCCAGATGTCAGAAGTGCGGCCAGTTTCCGGCGGTTGTACAAGGCGGCGCTGCTGACAACAACGTGGAAGAGGAAGTGGAAGATAACAACAACGACAACAGGGGTTTGGGATTTTTGCCTTGA

Protein sequence

MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDNRGLGFLP

Homology

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BLAST of Cmc06g0180061 vs. NCBI nr
Match: XP_008449155.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK11360.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDNRGLGFLP 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN EEEVEDNNNDNRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

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BLAST of Cmc06g0180061 vs. NCBI nr
Match: XP_004146217.1 (RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031745531.1 RING-H2 finger protein ATL80-like [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-91
Identity = 173/181 (95.58%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVED---NNNDNRGLGFL 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG A NN EEEVED   NNN+NRGLGFL
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 180

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BLAST of Cmc06g0180061 vs. NCBI nr
Match: KAE8637404.1 (hypothetical protein CSA_023381 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 2.8e-88
Identity = 169/181 (93.37%), Postives = 172/181 (95.03%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MS + +ALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 485 MSNFRQALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 544

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 545 ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 604

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVED---NNNDNRGLGFL 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG A NN EEEVED   NNN+NRGLGFL
Sbjct: 605 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 664

[Close]

BLAST of Cmc06g0180061 vs. NCBI nr
Match: XP_038904164.1 (RING-H2 finger protein ATL80-like [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 5.1e-82
Identity = 162/183 (88.52%), Postives = 167/183 (91.26%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----- 60
           M+ YIRAL  NTS APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLRR     
Sbjct: 1   MTRYIRALAGNTSLAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLRRGGGSA 60

Query: 61  GNQASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120
           GNQASANRGLKKKILQSLPKF+YKST G+GKIAAECAICLAEFLEGEEIRQLPQCGHCFH
Sbjct: 61  GNQASANRGLKKKILQSLPKFKYKSTGGEGKIAAECAICLAEFLEGEEIRQLPQCGHCFH 120

Query: 121 VSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDNRGLG 179
           VSCVDTWLG+HSSCPSCRQILVVARCQKCGQFPAVVQGGAA NN  EEVEDN   NRGLG
Sbjct: 121 VSCVDTWLGSHSSCPSCRQILVVARCQKCGQFPAVVQGGAAHNN--EEVEDN---NRGLG 178

[Close]

BLAST of Cmc06g0180061 vs. NCBI nr
Match: XP_023539225.1 (RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.2 bits (731), Expect = 2.0e-73
Identity = 152/196 (77.55%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYFQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+GK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNSGGAGNQASANRGLKKKILQSLPKFTYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEV- 179
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  D+N EEE  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNNEEEQK 220

[Close]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.0e-45
Identity = 101/187 (54.01%), Postives = 122/187 (65.24%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GNQ------- 72
           S+ P P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   GN+       
Sbjct: 12  SNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQT 71

Query: 73  -------ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCG 132
                  A+AN+GLKKK+LQSLPK  +     + +  AECAICLAEF  G+E+R LPQCG
Sbjct: 72  QSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCG 131

Query: 133 HCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDN 179
           H FHV+C+DTWLG+HSSCPSCRQILVVARC KCG  P     G  ++  E E+     ++
Sbjct: 132 HGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSG-LESEPEIEIRIKQGED 191

[Close]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 176.4 bits (446), Expect = 2.9e-43
Identity = 92/173 (53.18%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 6   RALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR------RGNQ- 65
           R L    S++P   +    SD V+ILA LLCAL C++GLIAV+RCAWLR      R +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVED 167
           FHVSC+DTWLG+HSSCPSCRQILVV RC KCG  P     G   +   ++ ED
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQRED 179

[Close]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40
Identity = 88/170 (51.76%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 12  TSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR---------GNQASA 71
           T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR         G     
Sbjct: 10  TASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP 69

Query: 72  NRGLKKKILQSLPKFRYK--------------STVGDGKIAAECAICLAEFLEGEEIRQL 131
           N+GLKKK LQ+LPK  Y               S+VGDG  + ECAIC+ EF EGEEIR L
Sbjct: 70  NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRIL 129

Query: 132 PQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAD 158
           P C H FHV+C+D WL + SSCPSCR+ILV  +C +CG   +  +    D
Sbjct: 130 PLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAETQVKD 179

[Close]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.3e-39
Identity = 84/147 (57.14%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----GNQASANRG 72
           ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR    G+  S N+G
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 73  LKKKILQSLPKFRYKSTVGDGKIAA------ECAICLAEFLEGEEIRQLPQCGHCFHVSC 132
           LKKK LQSLP+  + +       AA      ECAICL +F +GEEIR LP CGH FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 133 VDTWLGTHSSCPSCRQILVVARCQKCG 146
           +D WL + SSCPSCR+IL   RC +CG
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot
Match: Q9LZV8 (RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASAN---------RGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G   S++          GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTVGDGKIAA-ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 138
              Y S  G+ KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL +HSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

[Close]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL
Match: A0A5D3CJ22 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00120 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-95
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDNRGLGFLP 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN EEEVEDNNNDNRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

[Close]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL
Match: A0A1S3BKT0 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.1e-95
Identity = 177/178 (99.44%), Postives = 177/178 (99.44%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDNRGLGFLP 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNN EEEVEDNNNDNRGLGFLP
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNEEEEVEDNNNDNRGLGFLP 178

[Close]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL
Match: A0A0A0L622 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.2e-91
Identity = 173/181 (95.58%), Postives = 174/181 (96.13%), Query Frame = 0


Query: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60
           MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS
Sbjct: 1   MSPYIRALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQAS 60

Query: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120
           ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD
Sbjct: 61  ANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHCFHVSCVD 120

Query: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVED---NNNDNRGLGFL 179
           TWLGTHSSCPSCRQILVVARCQKCGQFPA VQGG A NN EEEVED   NNN+NRGLGFL
Sbjct: 121 TWLGTHSSCPSCRQILVVARCQKCGQFPADVQGGGAHNNEEEEVEDNINNNNNNRGLGFL 180

[Close]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL
Match: A0A6J1I6T7 (RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.1e-73
Identity = 151/196 (77.04%), Postives = 163/196 (83.16%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y++AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 41  MTRYLQALAGNTSSATATATAPPPEAVAIESDFVVILAALLCALICMVGLIAVARCAWLR 100

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+GK AAECAICLAEFL+GEEIR
Sbjct: 101 RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEGKFAAECAICLAEFLDGEEIR 160

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEV- 179
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG FPAVV G   D+N EEE  
Sbjct: 161 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGDFPAVVHGD--DHNNEEEQK 220

[Close]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL
Match: A0A6J1F5B4 (RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 8.0e-73
Identity = 151/196 (77.04%), Postives = 163/196 (83.16%), Query Frame = 0


Query: 1   MSPYIRALTANTSS------APPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR 60
           M+ Y +AL  NTSS      APPPEAVA+ESDFVVILAALLCALICMVGLIAVARCAWLR
Sbjct: 1   MTRYFQALAGNTSSATATATAPPPEAVAMESDFVVILAALLCALICMVGLIAVARCAWLR 60

Query: 61  R-------GNQASANRGLKKKILQSLPKFRYKS--TVGDGKIAAECAICLAEFLEGEEIR 120
           R       GNQASANRGLKKKILQSLPKF Y++  + G+ K AAECAICLAEFL+GEEIR
Sbjct: 61  RGSNGGGAGNQASANRGLKKKILQSLPKFAYRASGSGGEEKFAAECAICLAEFLDGEEIR 120

Query: 121 QLPQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEV- 179
           QLPQCGHCFHVSCVDTWL +HSSCPSCRQILVVARCQKCG+FPAVV GG  D+N EEE  
Sbjct: 121 QLPQCGHCFHVSCVDTWLSSHSSCPSCRQILVVARCQKCGEFPAVVHGG--DHNDEEEQK 180

[Close]

BLAST of Cmc06g0180061 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 7.5e-47
Identity = 101/187 (54.01%), Postives = 122/187 (65.24%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR---GNQ------- 72
           S+ P P       AL SD VVILAALLCALIC++GLIAV+RC WLRR   GN+       
Sbjct: 12  SNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQT 71

Query: 73  -------ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCG 132
                  A+AN+GLKKK+LQSLPK  +     + +  AECAICLAEF  G+E+R LPQCG
Sbjct: 72  QSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCG 131

Query: 133 HCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVEDNNNDN 179
           H FHV+C+DTWLG+HSSCPSCRQILVVARC KCG  P     G  ++  E E+     ++
Sbjct: 132 HGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSG-LESEPEIEIRIKQGED 191

[Close]

BLAST of Cmc06g0180061 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44
Identity = 92/173 (53.18%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 6   RALTANTSSAPPPEAVALESDFVVILAALLCALICMVGLIAVARCAWLR------RGNQ- 65
           R L    S++P   +    SD V+ILA LLCAL C++GLIAV+RCAWLR      R +Q 
Sbjct: 7   RLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQT 66

Query: 66  -----ASANRGLKKKILQSLPKFRYKSTVGDGKIAAECAICLAEFLEGEEIRQLPQCGHC 125
                A+AN+GLKKK+L+SLPK  Y       +   ECAICL EF  G+E+R LPQCGH 
Sbjct: 67  HPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHG 126

Query: 126 FHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAADNNVEEEVED 167
           FHVSC+DTWLG+HSSCPSCRQILVV RC KCG  P     G   +   ++ ED
Sbjct: 127 FHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQRED 179

[Close]

BLAST of Cmc06g0180061 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 88/170 (51.76%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 12  TSSAPPPEAV-ALESDFVVILAALLCALICMVGLIAVARCAWLRR---------GNQASA 71
           T+S PPPE + A E+D VVIL+ALLCAL+C+ GL AVARCAWLRR         G     
Sbjct: 10  TASPPPPEEILAAETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP 69

Query: 72  NRGLKKKILQSLPKFRYK--------------STVGDGKIAAECAICLAEFLEGEEIRQL 131
           N+GLKKK LQ+LPK  Y               S+VGDG  + ECAIC+ EF EGEEIR L
Sbjct: 70  NKGLKKKALQALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRIL 129

Query: 132 PQCGHCFHVSCVDTWLGTHSSCPSCRQILVVARCQKCGQFPAVVQGGAAD 158
           P C H FHV+C+D WL + SSCPSCR+ILV  +C +CG   +  +    D
Sbjct: 130 PLCSHAFHVACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTAETQVKD 179

[Close]

BLAST of Cmc06g0180061 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 161.8 bits (408), Expect = 5.2e-40
Identity = 84/147 (57.14%), Postives = 100/147 (68.03%), Query Frame = 0


Query: 13  SSAPPP----EAVALESDFVVILAALLCALICMVGLIAVARCAWLRR----GNQASANRG 72
           ++APPP    E +A ESD VVIL+ALLCALIC+ GL AV RCAWLRR    G+  S N+G
Sbjct: 10  TAAPPPQPSEEMIAAESDMVVILSALLCALICVAGLAAVVRCAWLRRFTAGGDSPSPNKG 69

Query: 73  LKKKILQSLPKFRYKSTVGDGKIAA------ECAICLAEFLEGEEIRQLPQCGHCFHVSC 132
           LKKK LQSLP+  + +       AA      ECAICL +F +GEEIR LP CGH FHV C
Sbjct: 70  LKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVEC 129

Query: 133 VDTWLGTHSSCPSCRQILVVARCQKCG 146
           +D WL + SSCPSCR+IL   RC +CG
Sbjct: 130 IDKWLVSRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Cmc06g0180061 vs. TAIR 10
Match: AT5G01880.1 (RING/U-box superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0


Query: 24  ESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASAN---------RGLKKKILQSLP 83
           +++ V+ILAALLCALI  +GL ++ RCA +R G   S++          GLKK+ L+  P
Sbjct: 31  DANMVIILAALLCALILALGLNSILRCA-MRCGFGLSSSAAAGTVADRAGLKKRELKKFP 90

Query: 84  KFRYKSTVGDGKIAA-ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 138
              Y S  G+ KIAA ECAICL EF +GE +R LP C H FH+SC+DTWL +HSSCP+CR
Sbjct: 91  VAEYGS--GEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 150

The following BLAST results are available for this feature:

BLAST of Cmc06g0180061 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449155.1	2.4e-95	99.44	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0052906.1 RING-H2 fin...	[more]
XP_004146217.1	4.6e-91	95.58	RING-H2 finger protein ATL80 [Cucumis sativus] >XP_031738026.1 RING-H2 finger pr...	[more]
KAE8637404.1	2.8e-88	93.37	hypothetical protein CSA_023381 [Cucumis sativus]	[more]
XP_038904164.1	5.1e-82	88.52	RING-H2 finger protein ATL80-like [Benincasa hispida]	[more]
XP_023539225.1	2.0e-73	77.55	RING-H2 finger protein ATL8 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cmc06g0180061 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	1.0e-45	54.01	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	2.9e-43	53.18	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	1.7e-40	51.76	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	7.3e-39	57.14	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9LZV8	3.0e-24	50.81	RING-H2 finger protein ATL74 OS=Arabidopsis thaliana OX=3702 GN=ATL74 PE=2 SV=1	[more]

BLAST of Cmc06g0180061 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ22	1.1e-95	99.44	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BKT0	1.1e-95	99.44	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103491102 PE=4 SV=1	[more]
A0A0A0L622	2.2e-91	95.58	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G000150 P...	[more]
A0A6J1I6T7	6.1e-73	77.04	RING-H2 finger protein ATL8 OS=Cucurbita maxima OX=3661 GN=LOC111470152 PE=4 SV=...	[more]
A0A6J1F5B4	8.0e-73	77.04	RING-H2 finger protein ATL8 OS=Cucurbita moschata OX=3662 GN=LOC111440980 PE=4 S...	[more]

BLAST of Cmc06g0180061 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	7.5e-47	54.01	RING/U-box superfamily protein	[more]
AT1G76410.1	2.0e-44	53.18	RING/U-box superfamily protein	[more]
AT4G35480.1	1.2e-41	51.76	RING-H2 finger A3B	[more]
AT2G17450.1	5.2e-40	57.14	RING-H2 finger A3A	[more]
AT5G01880.1	2.1e-25	50.81	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 91..132 e-value: 1.8E-5 score: 34.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 90..133 e-value: 2.5E-14 score: 53.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 91..133 score: 12.267982
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 87..141 e-value: 0.0017 score: 4.9
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..162
None	No IPR available	PANTHER	PTHR45798:SF61	E3 UBIQUITIN-PROTEIN LIGASE ATL44-RELATED	coord: 2..162
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 69..139
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 51..137 e-value: 3.1E-24 score: 86.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0180061.1	Cmc06g0180061.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane