Cmc06g0178471 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0178471
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr06: 34961192 .. 34962168 (+)
RNA-Seq Expression	Cmc06g0178471
Synteny	Cmc06g0178471

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAGTGTAAGTATATGGTCCAATCACTTGGTTCATACATAAATGTAATGCAAATTTTGTTTATATCATTAATCACATTCATTAGAAGAGTAACTCAAACATAGATTTAGATAACAACATTCTTGATATCCCTTATCCGATATCTTTATTTTAGCTGACATAATATAATAAATATTGGGTTCATTACTTATAAACAAAAGCTAAGGGTTTCTCAATTCCCCTTTGAGATGGAGTTTTTGACAGCATATCCACCATCATAACCTCCTTCTTCTCCACTTCCTTTGCTATTATCATACTCTCCTCCATGCACTCCTCCATTACCATAGCCACCACTAACTCCTCCACCACTCCCATATCCACTGTCACGTCCTTCATGTCCATGTGAATCTCCATAGCCATTGTCACGCCCTCCATATCCATGAGAATGACGATCGTCATAGCCGTTGTCACTTCCTTTACCTCCACTTCCATATCCTGAACCTCCAAGAGAAGGGCCATAACGATCTCCATAGCCTCCACCACCATTGTTACCATAACCATCACCATGTCCTCCTACACCTCCATATCCACCACCATTACCATATCCAACCCCACGATTATCATTTCGATCCCCATATCCATAATCACGTCTTCCACCACCTTCGTATCCGGAACCTCCAAGAGCGGAATCTCCAATTCCATGTCCTCTACTAGAGCTTCCACCATATGCATTATCATAGGATTCATCACGATGGCCAGGATCATACCCTACTCTTGGACTAGGACGATCATAACCATAGTGACGTGTACGTGGATCATAATCAAGAAGAGTTCTTGTAGCCGAAGCTAAACCTAACCCTACAAAGAGAAGAAAGGCAAGGCACAATGCTCTAAGGATAGCCATTGGAGAGAATTAGAGAATGAGTAGAATGCCAAGAAAATGCATGCATTGATCTCTTTATATAGGAAATGGGTGGGGAGGGTCTCTTCAACTTCT

mRNA sequence

TAGAAGTGTAAGTATATGGTCCAATCACTTGGTTCATACATAAATGTAATGCAAATTTTGTTTATATCATTAATCACATTCATTAGAAGAGTAACTCAAACATAGATTTAGATAACAACATTCTTGATATCCCTTATCCGATATCTTTATTTTAGCTGACATAATATAATAAATATTGGGTTCATTACTTATAAACAAAAGCTAAGGGTTTCTCAATTCCCCTTTGAGATGGAGTTTTTGACAGCATATCCACCATCATAACCTCCTTCTTCTCCACTTCCTTTGCTATTATCATACTCTCCTCCATGCACTCCTCCATTACCATAGCCACCACTAACTCCTCCACCACTCCCATATCCACTGTCACGTCCTTCATGTCCATGTGAATCTCCATAGCCATTGTCACGCCCTCCATATCCATGAGAATGACGATCGTCATAGCCGTTGTCACTTCCTTTACCTCCACTTCCATATCCTGAACCTCCAAGAGAAGGGCCATAACGATCTCCATAGCCTCCACCACCATTGTTACCATAACCATCACCATGTCCTCCTACACCTCCATATCCACCACCATTACCATATCCAACCCCACGATTATCATTTCGATCCCCATATCCATAATCACGTCTTCCACCACCTTCGTATCCGGAACCTCCAAGAGCGGAATCTCCAATTCCATGTCCTCTACTAGAGCTTCCACCATATGCATTATCATAGGATTCATCACGATGGCCAGGATCATACCCTACTCTTGGACTAGGACGATCATAACCATAGTGACGTGTACGTGGATCATAATCAAGAAGAGTTCTTGTAGCCGAAGCTAAACCTAACCCTACAAAGAGAAGAAAGGCAAGGCACAATGCTCTAAGGATAGCCATTGGAGAGAATTAGAGAATGAGTAGAATGCCAAGAAAATGCATGCATTGATCTCTTTATATAGGAAATGGGTGGGGAGGGTCTCTTCAACTTCT

Coding sequence (CDS)

ATGTCCTCCTACACCTCCATATCCACCACCATTACCATATCCAACCCCACGATTATCATTTCGATCCCCATATCCATAATCACGTCTTCCACCACCTTCGTATCCGGAACCTCCAAGAGCGGAATCTCCAATTCCATGTCCTCTACTAGAGCTTCCACCATATGCATTATCATAGGATTCATCACGATGGCCAGGATCATACCCTACTCTTGGACTAGGACGATCATAACCATAGTGACGTGTACGTGGATCATAATCAAGAAGAGTTCTTGTAGCCGAAGCTAA

Protein sequence

MSSYTSISTTITISNPTIIISIPISIITSSTTFVSGTSKSGISNSMSSTRASTICIIIGFITMARIIPYSWTRTIITIVTCTWIIIKKSSCSRS

Homology

The following BLAST results are available for this feature:

BLAST of Cmc06g0178471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0178471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0178471 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc06g0178471 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0178471.1	Cmc06g0178471.1	mRNA