Cmc06g0178331 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0178331
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein of Unknown Function (DUF239)
Location	CMiso1.1chr06: 34896617 .. 34897900 (-)
RNA-Seq Expression	Cmc06g0178331
Synteny	Cmc06g0178331

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCCACAAGATGATCAATCTAAAGATTTTTCTCATGACGCTGTCAGATTCCCGTACGATCAAAATGTAAGTATATCTTTAATTTCTTGCATAAATTGTTTTTTTGCCTAAATTTTTGTTTATAAAGATACGTACCTTTGAGCTTTATCCATGGTTTAAAAAGTACTTTTATATCTTTAAAAGTTGCAAAAGTATCATTTAGTCTTTCGTACCATTCTTTCAAGCTTTACAACCCCAACAACCGTCTTAATTAGCACATTGATTTTCTATTCAACATTCTAAAGGTTGTATTTCAAGAATAGTTTTGAAACATTGCAACAGCCTGCAGAAGAATATCATTTTAAAAAAGATAAAGAATAAAGTTATAGGATACGTAACTTGGTTATCGTTTATAGCTTTAATCGTTATAGGTTAACTATGATGAGGGTGCTAATTAAGGAAGTGTGTCAACATGGTTTCCCTTTTATGACTTGTTAAAGACAAAGTGTGCGTCAAAACGTTTCGACGGTTTATTATTCAAAACTAACCCTAATATATAATGCATGTTATTTTGTTACTCCATGGTTGCTAACATTTTGATTTTATAAATTGTGAATATTGTGGATATATAAGGTTGTTTCTCATTCATTGATAAAAGCAACATATTATCATGGAGCAAAAGCTCGAATTGCTGTGTACAATGTGAGTTTGAGTGATGAGAATCAATCTTCTTCGGCTAACATATGGGTTGTTGGTGGCCCTGATGAATCTCTTAATGTTCTTATGGCTGGTTGGCAGGTATATATACATTTTCATAACTATATATATACACATTTTTCATTTTCATTTTAACTTTGTAATTCTAATAACATAAATTTGTTCTTTTTAATTATTCTTTTTTATCGTCAATGTTTTCAAAAACTTGGTTTTTAATAGTTTTAAACTTTGACGTATTTATTTAAGAAATGTGAAAACTTAATTAATTACAATAATCTAGACTACAAAGTTGCTAATTTATATATAACTAGTGATTCTTTTTTATAGCTTATACCACTAAAATTTAGTGAGGGTTCTTTTCTTTTTTTTTTTAATCTTTTTATTTTAGGTGAATCCAGCGGTAAGTGGTGATAGTCTCCCTAGAACGTTCGTGTATTGGACGGTAAGTGAATGAATACTTTTTTTCATCATATAGTTTCATTATAATTAGTGTAATCAATTTGTTAGGTTGTACGAGGAATTTTGGACCAATTACCGATTGTCACATTATTTATCAAATTAACGACGAAAAATATAAATAATTGA

mRNA sequence

ATGAAGCCACAAGATGATCAATCTAAAGATTTTTCTCATGACGCTGTCAGATTCCCGTACGATCAAAATGTTGTTTCTCATTCATTGATAAAAGCAACATATTATCATGGAGCAAAAGCTCGAATTGCTGTGTACAATGTGAGTTTGAGTGATGAGAATCAATCTTCTTCGGCTAACATATGGGTTGTTGGTGGCCCTGATGAATCTCTTAATGTTCTTATGGCTGGTTGGCAGGTGAATCCAGCGGTAAGTGGTGATAGTCTCCCTAGAACGTTCGTGTATTGGACGGTTGTACGAGGAATTTTGGACCAATTACCGATTGTCACATTATTTATCAAATTAACGACGAAAAATATAAATAATTGA

Coding sequence (CDS)

ATGAAGCCACAAGATGATCAATCTAAAGATTTTTCTCATGACGCTGTCAGATTCCCGTACGATCAAAATGTTGTTTCTCATTCATTGATAAAAGCAACATATTATCATGGAGCAAAAGCTCGAATTGCTGTGTACAATGTGAGTTTGAGTGATGAGAATCAATCTTCTTCGGCTAACATATGGGTTGTTGGTGGCCCTGATGAATCTCTTAATGTTCTTATGGCTGGTTGGCAGGTGAATCCAGCGGTAAGTGGTGATAGTCTCCCTAGAACGTTCGTGTATTGGACGGTTGTACGAGGAATTTTGGACCAATTACCGATTGTCACATTATTTATCAAATTAACGACGAAAAATATAAATAATTGA

Protein sequence

MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANIWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRGILDQLPIVTLFIKLTTKNINN

Homology

[Close]

BLAST of Cmc06g0178331 vs. NCBI nr
Match: TYK11502.1 (neprosin 2 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-41
Identity = 92/100 (92.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI 60
           MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI
Sbjct: 347 MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI 406

Query: 61  WVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRG 101
           WVVGGPDESLNVLMA      AVSGDSLPRTFVYWT  RG
Sbjct: 407 WVVGGPDESLNVLMA------AVSGDSLPRTFVYWTTDRG 440

[Close]

BLAST of Cmc06g0178331 vs. NCBI nr
Match: XP_031738649.1 (uncharacterized protein LOC116402744 [Cucumis sativus] >KAE8650030.1 hypothetical protein Csa_009857 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 2.2e-36
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MKPQDDQ-SKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSAN 60
           M P+DD  S D  +DAVRFPY QNVVSHSLIKA YYHGAKARIAV+NVSLSD  QSSSAN
Sbjct: 149 MNPEDDDLSGDSFYDAVRFPYYQNVVSHSLIKAQYYHGAKARIAVHNVSLSDNGQSSSAN 208

Query: 61  IWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRGI 102
           IWV+GG D+SLNVLMAGWQVNPAV+GD+LPRTFVYWTV  G+
Sbjct: 209 IWVLGGSDDSLNVLMAGWQVNPAVNGDNLPRTFVYWTVDTGV 250

[Close]

BLAST of Cmc06g0178331 vs. NCBI nr
Match: KAE8650029.1 (hypothetical protein Csa_011504 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-25
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 1   MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKAT-YYHGAKARIAVYNVSLSDENQSSSAN 60
           M PQDDQS DF  D+V+FPY QNVVSHSL K T  Y+G K+ ++VYNVSLS + QSSS N
Sbjct: 154 MNPQDDQSDDFFDDSVKFPYYQNVVSHSLEKGTEKYYGTKSYMSVYNVSLSFD-QSSSTN 213

Query: 61  IWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRG 101
           IW+VGGP +SL VLM GW VNP V+GD + R+FVYWT   G
Sbjct: 214 IWIVGGPVDSLGVLMTGWLVNPEVNGDFVTRSFVYWTADGG 253

[Close]

BLAST of Cmc06g0178331 vs. NCBI nr
Match: KAA0053047.1 (uncharacterized protein E6C27_scaffold344G001630 [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 2.1e-23
Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKA-TYYHGAKARIAVYNVSLSDENQSSSAN 60
           M PQDDQS DF  D+V++P +QNVVSHSL K    Y+G K+ ++VYNVSLS   QSSS+N
Sbjct: 1   MMPQDDQSDDFFDDSVKYPDNQNVVSHSLKKGPEKYYGTKSYMSVYNVSLS-FGQSSSSN 60

Query: 61  IWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRG 101
           IW+VGGP  SL VLM GW VNP V+GD + R+FVYWT   G
Sbjct: 61  IWIVGGPTNSLGVLMTGWLVNPEVNGDFITRSFVYWTADGG 100

[Close]

BLAST of Cmc06g0178331 vs. NCBI nr
Match: XP_022145288.1 (uncharacterized protein LOC111014777 [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-18
Identity = 45/81 (55.56%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 16  VRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANIWVVGGPDESLNVLMA 75
           V FPY+Q+VVS ++ K   Y+GA   ++VYN+S++ ++QSSS+NIW++GGP ++ NV++A
Sbjct: 149 VDFPYNQDVVSVAMKKGIKYYGASGSVSVYNLSVA-QDQSSSSNIWIIGGPPQAPNVILA 208

Query: 76  GWQVNPAVSGDSLPRTFVYWT 97
           GWQVNP ++GDSL R FVYWT
Sbjct: 209 GWQVNPMINGDSLTRMFVYWT 228

[Close]

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL
Match: A0A5D3CJM0 (Neprosin 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001660 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.0e-42
Identity = 92/100 (92.00%), Postives = 92/100 (92.00%), Query Frame = 0


Query: 1   MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI 60
           MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI
Sbjct: 347 MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANI 406

Query: 61  WVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRG 101
           WVVGGPDESLNVLMA      AVSGDSLPRTFVYWT  RG
Sbjct: 407 WVVGGPDESLNVLMA------AVSGDSLPRTFVYWTTDRG 440

[Close]

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL
Match: A0A0A0L400 (Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011710 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MKPQDDQ-SKDFSHDAVRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSAN 60
           M P+DD  S D  +DAVRFPY QNVVSHSLIKA YYHGAKARIAV+NVSLSD  QSSSAN
Sbjct: 1   MNPEDDDLSGDSFYDAVRFPYYQNVVSHSLIKAQYYHGAKARIAVHNVSLSDNGQSSSAN 60

Query: 61  IWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRGI 102
           IWV+GG D+SLNVLMAGWQVNPAV+GD+LPRTFVYWTV  G+
Sbjct: 61  IWVLGGSDDSLNVLMAGWQVNPAVNGDNLPRTFVYWTVDTGV 102

[Close]

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL
Match: A0A5A7UEV4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001630 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 1.0e-23
Identity = 62/101 (61.39%), Postives = 75/101 (74.26%), Query Frame = 0


Query: 1   MKPQDDQSKDFSHDAVRFPYDQNVVSHSLIKA-TYYHGAKARIAVYNVSLSDENQSSSAN 60
           M PQDDQS DF  D+V++P +QNVVSHSL K    Y+G K+ ++VYNVSLS   QSSS+N
Sbjct: 1   MMPQDDQSDDFFDDSVKYPDNQNVVSHSLKKGPEKYYGTKSYMSVYNVSLS-FGQSSSSN 60

Query: 61  IWVVGGPDESLNVLMAGWQVNPAVSGDSLPRTFVYWTVVRG 101
           IW+VGGP  SL VLM GW VNP V+GD + R+FVYWT   G
Sbjct: 61  IWIVGGPTNSLGVLMTGWLVNPEVNGDFITRSFVYWTADGG 100

[Close]

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL
Match: A0A6J1CVJ6 (uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014777 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.0e-18
Identity = 45/81 (55.56%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 16  VRFPYDQNVVSHSLIKATYYHGAKARIAVYNVSLSDENQSSSANIWVVGGPDESLNVLMA 75
           V FPY+Q+VVS ++ K   Y+GA   ++VYN+S++ ++QSSS+NIW++GGP ++ NV++A
Sbjct: 149 VDFPYNQDVVSVAMKKGIKYYGASGSVSVYNLSVA-QDQSSSSNIWIIGGPPQAPNVILA 208

Query: 76  GWQVNPAVSGDSLPRTFVYWT 97
           GWQVNP ++GDSL R FVYWT
Sbjct: 209 GWQVNPMINGDSLTRMFVYWT 228

[Close]

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL
Match: A0A0A0L581 (Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011690 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 8.0e-16
Identity = 48/74 (64.86%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 24 VVSHSLIKAT-YYHGAKARIAVYNVSLSDENQSSSANIWVVGGPDESLNVLMAGWQVNPA 83
          VVSHSL K T  Y+G K+ ++VYNVSLS + QSSS NIW+VGGP +SL VLM GW VNP 
Sbjct: 4  VVSHSLEKGTEKYYGTKSYMSVYNVSLSFD-QSSSTNIWIVGGPVDSLGVLMTGWLVNPE 63

Query: 84 VSGDSLPRTFVYWT 97
          V+GD + R+FVYWT
Sbjct: 64 VNGDFVTRSFVYWT 76

[Close]

BLAST of Cmc06g0178331 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-10
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 35  YHGAKARIAVYNVSLSDENQSSSANIWVVGGP-DESLNVLMAGWQVNPAVSGDSLPRTFV 94
           Y+GAKA I V++  ++ + + S + IWV+ G     LN + AGWQ++P + GD+ PR F 
Sbjct: 174 YYGAKASINVWSPRVTSQYEFSLSQIWVIAGSFTHDLNTIEAGWQISPELYGDTYPRFFT 233

Query: 95  YWT 97
           YWT
Sbjct: 234 YWT 236

[Close]

BLAST of Cmc06g0178331 vs. TAIR 10
Match: AT1G70550.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-10
Identity = 27/63 (42.86%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 35  YHGAKARIAVYNVSLSDENQSSSANIWVVGGP-DESLNVLMAGWQVNPAVSGDSLPRTFV 94
           Y+GAKA I V++  ++ + + S + IWV+ G     LN + AGWQ++P + GD+ PR F 
Sbjct: 229 YYGAKASINVWSPRVTSQYEFSLSQIWVIAGSFTHDLNTIEAGWQISPELYGDTYPRFFT 288

Query: 95  YWT 97
           YWT
Sbjct: 289 YWT 291

[Close]

BLAST of Cmc06g0178331 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 30  IKATYYHGAKARIAVYNVSLSDENQSSSANIWVVGGP-DESLNVLMAGWQVNPAVSGDSL 89
           +  + Y+GAKA I V+   +  + + S + IW++ G     LN + AGWQ++P + GD+ 
Sbjct: 168 VSGSQYYGAKASINVWTPRVISQYEFSLSQIWIIAGSFAGDLNTIEAGWQISPELYGDTN 227

Query: 90  PRTFVYWT 97
           PR F YWT
Sbjct: 228 PRFFTYWT 235

[Close]

BLAST of Cmc06g0178331 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 30  IKATYYHGAKARIAVYNVSLSDENQSSSANIWVVGGP-DESLNVLMAGWQVNPAVSGDSL 89
           +  + Y+GAKA I V+   +  + + S + IW++ G     LN + AGWQ++P + GD+ 
Sbjct: 168 VSGSQYYGAKASINVWTPRVISQYEFSLSQIWIIAGSFAGDLNTIEAGWQISPELYGDTN 227

Query: 90  PRTFVYWT 97
           PR F YWT
Sbjct: 228 PRFFTYWT 235

[Close]

BLAST of Cmc06g0178331 vs. TAIR 10
Match: AT5G25960.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09
Identity = 29/77 (37.66%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 22  QNVVSHSLIKATYYH--GAKARIAVYNVSLSDENQSSSANIWVVGGPDESLNVLMAGWQV 81
           +  +  +++ A  Y+  GA++ I V+N      +  SSA IW++GG  ++   + AGW V
Sbjct: 106 KGTIPEAVLMALGYNFIGAQSDINVWNPPRVQASDYSSAQIWLLGGLSDTFESIEAGWAV 165

Query: 82  NPAVSGDSLPRTFVYWT 97
           NP+V GDS  R F YWT
Sbjct: 166 NPSVFGDSRTRLFTYWT 182

The following BLAST results are available for this feature:

BLAST of Cmc06g0178331 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11502.1	1.0e-41	92.00	neprosin 2 [Cucumis melo var. makuwa]	[more]
XP_031738649.1	2.2e-36	79.41	uncharacterized protein LOC116402744 [Cucumis sativus] >KAE8650030.1 hypothetica...	[more]
KAE8650029.1	3.0e-25	64.36	hypothetical protein Csa_011504 [Cucumis sativus]	[more]
KAA0053047.1	2.1e-23	61.39	uncharacterized protein E6C27_scaffold344G001630 [Cucumis melo var. makuwa]	[more]
XP_022145288.1	2.1e-18	55.56	uncharacterized protein LOC111014777 [Momordica charantia]	[more]

BLAST of Cmc06g0178331 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0178331 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJM0	5.0e-42	92.00	Neprosin 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001660 PE...	[more]
A0A0A0L400	1.1e-36	79.41	Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011710 PE...	[more]
A0A5A7UEV4	1.0e-23	61.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1CVJ6	1.0e-18	55.56	uncharacterized protein LOC111014777 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A0A0L581	8.0e-16	64.86	Neprosin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G011690 PE...	[more]

BLAST of Cmc06g0178331 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70550.2	6.5e-10	42.86	Protein of Unknown Function (DUF239)	[more]
AT1G70550.1	6.5e-10	42.86	Protein of Unknown Function (DUF239)	[more]
AT1G23340.1	4.2e-09	38.24	Protein of Unknown Function (DUF239)	[more]
AT1G23340.2	4.2e-09	38.24	Protein of Unknown Function (DUF239)	[more]
AT5G25960.1	4.2e-09	37.66	Protein of Unknown Function (DUF239)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004314	Neprosin	PFAM	PF03080	Neprosin	coord: 42..97 e-value: 1.3E-12 score: 47.5
None	No IPR available	GENE3D	3.90.1320.10		coord: 44..121 e-value: 2.2E-8 score: 35.6
None	No IPR available	PANTHER	PTHR31589:SF133	OS08G0411100 PROTEIN	coord: 24..98
None	No IPR available	PANTHER	PTHR31589	PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED	coord: 24..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0178331.1	Cmc06g0178331.1	mRNA