Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGGCGGCGGCGAGAGAACGAAGATGGAGACGGCGGAGACAGTGGCTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTCCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTCTTTCTTGGTTTTTTTTCTCTCTCTCTCTATAACTCTGGATTTCTTTTTGCAATTTCTGGCATGGATTTCTGTTATATGTTGATTATTTCATCTGAAGTTATAAGAGCCCTAGCTTACTATATCGAATTGGAACAGAAAAAAAGGGAGATTTTGAATGAGTAGACTCATGCTTATTTGATATGGTGAGAGTTTCAGAGAGTCCCATGGTTCCATTTAGCTCCTAGTGTAATGGATGAAAAAATGACACTAGTTACATTAGAAGATTGAACTCCATTTGTTTTCTAAAATTAAGTTGTAAACTTACTTCCACTTTTTCTTGTTTTGCTAAGAATTCAATCTTTTGTTGAGGAAGGATGAAAACAAAGGTAAGGAAATGGTGAGAAATAAACAAGTAGAATTTTTGAATATGGAATGTTTATCAAAGGGACTCTATAGAATGAAGCAATGAATCCCAAATTATAAAATAACAGTGGTTTTAATTTCTTTTCATGTGTTTGGGTGTTTTGTAGTTGAGAGGAAGTAACAAATTTTGATGCATTAGTTCTTTTATTATATCTTTATGAAGCAATTTTCGTGTAGTTTTTTGAATCATTTTTAAGCTTTGAAGACGAAAGAATTCAGCATGTTCGTCATTTCCACACTTTTTGTTACTGGAAACGTGGGGGGAAAATATCTTTGGCTTTATTTGAAGTTGGTTATTTTAATTATGGGAAATAAATGTCTTGAGTTCATAATATATTGAAACTGATTTGGTAATTAGTTTGATTCTAATCCTTGAATGCTGCTTCTTTCTGTTCATCTTAAATATTCTAATGTTTGTTGCACCTCTAACTTCAATTGATGTAGAACGATATGGATCACAGTTGACATCCAATGAACTCCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAGCCCAACATCAGATGAATTACACACTAGGTCTGTTATTGTGAAAAATAGGAGACGGGCATATCTAAGTAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTTAATCAAGGGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGAAAGAGAAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGGGGGAGGACAATAATAAGCCTGAAAATGGAGTTGATTCCATGGAGGTAATTTTGTGTTATCTTTTCTTTGTCTCATCCTTTGATTTCCTTTACAAATAACTTTTTTTTATTACTTTAATTATTACTTATGATTAGCTTGCTTAATTGGTTTTTCGATCAGTCTTATGATTTATTCCGCCTTGTTCGTTATTCTTCTTCTTTTGCAATCCCAAGTCCTGTCTATTTAACTAATATAAGATGGTTTTAATGCTTATAGATTTTTTTTTAGATATTAATGTTTTATACATCTGATCATTGTCAACTGAACAAAATAACATATCTGAATGCGTTATGATTTGGGGAGATCGCTTGTCCTCGATAATGAGTTGTTTGACATTTGATGATTTTGCTTGTAGGTGACTAGAGCCATGGATGATCAGCATGAAAGGCCAGCAACCGAGAATAGTGAAGGTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAGCGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGATGATCACTGGATGAGGGAAGCCAATGATGATGCTGAGGAGAAATACTTCGACGAAGATTAGAGCGAATGAAAGGTGCAGTTCCTTTCATCTAGTTGTAAAAATTTTATGTTAAATTGGTACCTGTATATTAGATGCTTTCTGCTCTTCTATATTTTATAACCTCTCAAACTTTCTAGTGTTTAAGCATGGAAATATGTAGATAGTGACAAGTCTTTCTTCTTTAATCTGAGAGTAGAATTTGAATTCCTGTTAGACTGCTTTTAGAATGACGCTCAATTTAACTATTAGGAGCCGAAGGAAGGGTCTAGGTTCAAATAGGACACTCCTTATCTTGTCTTTAATCTTTCAAAATACCTGTTTTTGTATTTGAATTTTAAGACCCTTTCTGTTTTCGTCAAAAAATGTTTACGGTGTTACCTATTCAGAAAATAGTTACTTTTTCCTTTTGGTGTTTATGGTTGAAAACTTTTTCAACGAATTGAAAATGTGAATTCAAGTATGTGATAGTTTGGTCGAGACATGTATTAAGTGAACGAATATTTGAGGGTAGAGATTTTAGAAGTACAAAGGCTAAAATAAAAACTGGATTACTTTTTGAAAATATAAAGGCTAAAATAAAACATGTAGAACCCTCGTCACGGGGTAGACAAGTAGAGTGATGCACTTTCTAGTTTCCATTAATGTACTCATTTATCTTGCTAAATACTGGAAAATCATAGATGAGTCTTTCAATTGTGACTTCTTTTACACGTTAGAAAAGACATTTATGCTATCCTTTGTTTTATTTTTATTACAAACTCTTAGTTCTTATTCAGATCACGGAACTGGAGAAAGATAAGAAGAAATGCGACTACGAACAAGTTTACTACGATCTGTGATGAGATGATGAATGCCACTAAAAGACTCCGGTGAACAATATCATAACTCTGGTAAGATTTAGAAAATGATCTTTGTGGTTACTTTAATGGCATGGAGTTTGGCATAAGCTTCTTGCAGTTTCATTGACTTTTTGTTTCTCACAGAAGAAAGAAAGTTGGTGAAATGGATAGAGAAAAAGTTCTAATGAAATCGATAGGGAGAAATTGGGTTACTTGGTATTGGCATATGGCTCAACTGAAATCTTGTAGTTTGATTCATGTTCTTTATGGAATGTGTGAATAGTGATAACTCTCAATCTGTTCATGAACATTGTTGTATAAAATTTGATGGGGTTAGATTATAGATTTAGTACACGGAGTTTAAAGTTTAAGATTTAGACACAATATTGGAAGTTTACAGTTCAGTTAAACAATATTCAAGTCTATATATAATTGATTAATTAATTTCTAAAAGTTTTGAATT
mRNA sequence
GACTGAGCCGGCCGAGGGTTTATTATTCACCGGGGAAGAGGCGGCGGCGAGAGAACGAAGATGGAGACGGCGGAGACAGTGGCTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTCCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTCTTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTCCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAGCCCAACATCAGATGAATTACACACTAGGTCTGTTATTGTGAAAAATAGGAGACGGGCATATCTAAGTAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTTAATCAAGGGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGAAAGAGAAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGGGGGAGGACAATAATAAGCCTGAAAATGGAGTTGATTCCATGGAGGTGACTAGAGCCATGGATGATCAGCATGAAAGGCCAGCAACCGAGAATAGTGAAGGTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAGCGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGATGATCACTGGATGAGGGAAGCCAATGATGATGCTGAGGAGAAATACTTCGACGAAGATTAGAGCGAATGAAAGATCACGGAACTGGAGAAAGATAAGAAGAAATGCGACTACGAACAAGTTTACTACGATCTGTGATGAGATGATGAATGCCACTAAAAGACTCCGGTGAACAATATCATAACTCTGAAGAAAGAAAGTTGGTGAAATGGATAGAGAAAAAGTTCTAATGAAATCGATAGGGAGAAATTGGGTTACTTGGTATTGGCATATGGCTCAACTGAAATCTTGTAGTTTGATTCATGTTCTTTATGGAATGTGTGAATAGTGATAACTCTCAATCTGTTCATGAACATTGTTGTATAAAATTTGATGGGGTTAGATTATAGATTTAGTACACGGAGTTTAAAGTTTAAGATTTAGACACAATATTGGAAGTTTACAGTTCAGTTAAACAATATTCAAGTCTATATATAATTGATTAATTAATTTCTAAAAGTTTTGAATT
Coding sequence (CDS)
ATGGAGACGGCGGAGACAGTGGCTGCGAAAGGATTGAGTTGCGAAGCCATGGATTGCTTGTCGGAAAGGCTTTCGTTGCAGGAAGATCTTTACTTCCCTCGTGCTCTTCAATCCACTGCCTCGAATCCGTCTCAGCGCAAGGCCATTCTGCTCGACCTTCTTTCTCGCGATGTCGCCGTCTTTCTTGAACGATATGGATCACAGTTGACATCCAATGAACTCCATGAGTTTGATGCTCTCAAGGACGATTACGAGATCAATTGGCATTTAAAGCACCTTCGGAGTATAAAGAGCCCAACATCAGATGAATTACACACTAGGTCTGTTATTGTGAAAAATAGGAGACGGGCATATCTAAGTAAATTGATATATGATGGTCAGTACTTTTCGGAGGATGCAATGAGGGAGAGAGAGCCTTTTTTGCATCATGAGTATGTAGGGAAGTTTCAAGATCCAAGTGGGAGAGGAATGGCAAGACCAGGGGAAAGGTGGTCAGAGACTCTGATGAGGAGATCAGAAGAAGCAATGTTGGTTGCTAAGATCAGAGGAGAGCAACGCAGGTTAGGTGTTGCTGAGAGGGACTTGGTAGGTAATAATGTTAATCAAGGGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGAAAGAGAAAGAGGAAGAAGAGGAAGAGAAAGAGAAAGAGGAAGAGGGGGAGGACAATAATAAGCCTGAAAATGGAGTTGATTCCATGGAGGTGACTAGAGCCATGGATGATCAGCATGAAAGGCCAGCAACCGAGAATAGTGAAGGTGCTGAGGGTGGGTCTAATCATGTAGCAACTTTATCTGAAGCAGATATGCAAGATCAGATGGATCAATTCACATATATCATGCATCAGAAATTTTTGTTGGGAGAAGACAGCGAGCATTTAGATTACTCAAAAATAGACAATGATGAGACCTTGGATGATCACTGGATGAGGGAAGCCAATGATGATGCTGAGGAGAAATACTTCGACGAAGATTAG
Protein sequence
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Homology
BLAST of Cmc06g0177851 vs. NCBI nr
Match:
XP_008448764.1 (PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo])
HSP 1 Score: 620.5 bits (1599), Expect = 8.5e-174
Identity = 346/350 (98.86%), Postives = 346/350 (98.86%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQG----EEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK 240
IRGEQRRLGVAERDLVGNNVNQG EEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK 240
Query: 241 EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300
EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD
Sbjct: 241 EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300
Query: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350
BLAST of Cmc06g0177851 vs. NCBI nr
Match:
XP_031737463.1 (coiled-coil domain-containing protein 97 [Cucumis sativus] >KGN55829.2 hypothetical protein Csa_010155 [Cucumis sativus])
HSP 1 Score: 582.4 bits (1500), Expect = 2.6e-162
Identity = 324/349 (92.84%), Postives = 331/349 (94.84%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAET AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEE EEE+E+EEEE E+EKEE
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEE------EEEEEEEEEEAEEEKEE 240
Query: 241 EGED---NNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQ 300
GED NNK NG DSME+TRAMDDQHE PATENSE AEGGSNHVATLSEADMQDQMDQ
Sbjct: 241 VGEDTKGNNKLANGADSMEITRAMDDQHEMPATENSEAAEGGSNHVATLSEADMQDQMDQ 300
Query: 301 FTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
FTYIMHQKFLLGED+EHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 FTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 343
BLAST of Cmc06g0177851 vs. NCBI nr
Match:
XP_038906003.1 (coiled-coil domain-containing protein 97 [Benincasa hispida] >XP_038906004.1 coiled-coil domain-containing protein 97 [Benincasa hispida])
HSP 1 Score: 568.9 bits (1465), Expect = 2.9e-158
Identity = 313/349 (89.68%), Postives = 324/349 (92.84%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAE AAKGLSCEAMDCLSERLSLQEDLYFPRALQSTA+NPSQRKAILLDLLSRDVAV
Sbjct: 6 METAEAAAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTATNPSQRKAILLDLLSRDVAV 65
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTS+ELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYL+
Sbjct: 66 FLERYGSQLTSSELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLN 125
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLH+EYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 126 KLIYDGQYFSEDAMREREPFLHYEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 185
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAER+LVGN+VNQGEEEEEEEEEEEEE EEEEEE+EKEE
Sbjct: 186 IRGEQRRLGVAERELVGNDVNQGEEEEEEEEEEEEE-------------EEEEEEEEKEE 245
Query: 241 EGED---NNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQ 300
EGED NNKP NGVDSMEVT AMDD HER AT NS+ AEGGSNHVA LSEADMQDQMDQ
Sbjct: 246 EGEDRKGNNKPANGVDSMEVTSAMDDHHERSATGNSQAAEGGSNHVAILSEADMQDQMDQ 305
Query: 301 FTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
FTYIMHQKFLLGED+EHLDYSKIDNDETLDDHW+REANDDAEEKYFD+D
Sbjct: 306 FTYIMHQKFLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDQD 341
BLAST of Cmc06g0177851 vs. NCBI nr
Match:
KAA0041038.1 (YTH domain-containing protein 1 [Cucumis melo var. makuwa])
HSP 1 Score: 543.1 bits (1398), Expect = 1.7e-150
Identity = 289/346 (83.53%), Postives = 289/346 (83.53%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDLVGNN
Sbjct: 181 IRGEQRRLGVAERDLVGNN----------------------------------------- 240
Query: 241 EGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 300
VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY
Sbjct: 241 ----------------VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 289
Query: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 289
BLAST of Cmc06g0177851 vs. NCBI nr
Match:
TYK12071.1 (coiled-coil domain-containing protein 97 [Cucumis melo var. makuwa])
HSP 1 Score: 533.5 bits (1373), Expect = 1.4e-147
Identity = 285/346 (82.37%), Postives = 285/346 (82.37%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDL
Sbjct: 181 IRGEQRRLGVAERDL--------------------------------------------- 240
Query: 241 EGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 300
VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY
Sbjct: 241 ----------------VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 285
Query: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 285
BLAST of Cmc06g0177851 vs. ExPASy TrEMBL
Match:
A0A1S3BKG3 (coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832 PE=4 SV=1)
HSP 1 Score: 620.5 bits (1599), Expect = 4.1e-174
Identity = 346/350 (98.86%), Postives = 346/350 (98.86%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQG----EEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK 240
IRGEQRRLGVAERDLVGNNVNQG EEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEK 240
Query: 241 EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300
EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD
Sbjct: 241 EKEEEGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMD 300
Query: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 QFTYIMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 350
BLAST of Cmc06g0177851 vs. ExPASy TrEMBL
Match:
A0A5A7TDJ3 (YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00070 PE=4 SV=1)
HSP 1 Score: 543.1 bits (1398), Expect = 8.3e-151
Identity = 289/346 (83.53%), Postives = 289/346 (83.53%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDLVGNN
Sbjct: 181 IRGEQRRLGVAERDLVGNN----------------------------------------- 240
Query: 241 EGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 300
VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY
Sbjct: 241 ----------------VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 289
Query: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 289
BLAST of Cmc06g0177851 vs. ExPASy TrEMBL
Match:
A0A0A0L5C7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1)
HSP 1 Score: 534.3 bits (1375), Expect = 3.9e-148
Identity = 329/489 (67.28%), Postives = 339/489 (69.33%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAET AKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETAGAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIK+PTSDELHTRSVIVKNRRRAYL+
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKNPTSDELHTRSVIVKNRRRAYLN 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEE+E+EEE+E+EEEEEE+E+EE
Sbjct: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 240
Query: 241 E----------------------------------------------------------- 300
E
Sbjct: 241 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Query: 301 ------------------------------------------------------------ 347
Sbjct: 301 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 360
BLAST of Cmc06g0177851 vs. ExPASy TrEMBL
Match:
A0A5D3CJT9 (Coiled-coil domain-containing protein 97 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00870 PE=4 SV=1)
HSP 1 Score: 533.5 bits (1373), Expect = 6.6e-148
Identity = 285/346 (82.37%), Postives = 285/346 (82.37%), Query Frame = 0
Query: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV
Sbjct: 1 METAETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAV 60
Query: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS
Sbjct: 61 FLERYGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLS 120
Query: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK
Sbjct: 121 KLIYDGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAK 180
Query: 181 IRGEQRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEE 240
IRGEQRRLGVAERDL
Sbjct: 181 IRGEQRRLGVAERDL--------------------------------------------- 240
Query: 241 EGEDNNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 300
VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY
Sbjct: 241 ----------------VTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTY 285
Query: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED
Sbjct: 301 IMHQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 285
BLAST of Cmc06g0177851 vs. ExPASy TrEMBL
Match:
A0A6J1F5X8 (coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111442400 PE=4 SV=1)
HSP 1 Score: 526.2 bits (1354), Expect = 1.1e-145
Identity = 292/344 (84.88%), Postives = 311/344 (90.41%), Query Frame = 0
Query: 5 ETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
E AAKGLSCEAMDCLSERLSLQ+ LYFPRALQSTA+NPSQRKAILLDLLSRDVAVFLER
Sbjct: 2 EAAAAKGLSCEAMDCLSERLSLQDGLYFPRALQSTATNPSQRKAILLDLLSRDVAVFLER 61
Query: 65 YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKLIY 124
YGSQLTSNELHEFD LKDDYEINWHLKHL SIKSPTSDELH+RSV+VKNRRRAYL+KLI
Sbjct: 62 YGSQLTSNELHEFDNLKDDYEINWHLKHLWSIKSPTSDELHSRSVVVKNRRRAYLNKLIC 121
Query: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
DGQYFSEDAMR+R+PFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE
Sbjct: 122 DGQYFSEDAMRDRQPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 181
Query: 185 QRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEEEGED 244
QRRLGVAERDLVGN++N EEEEEEEEEEEEEE EE+EEE+EKEE GED
Sbjct: 182 QRRLGVAERDLVGNDLNPREEEEEEEEEEEEEE------------EEDEEEEEKEEVGED 241
Query: 245 --NNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTYIM 304
+K NG SMEV+ AMD+Q ER AT+N++ AEGGSNH ATLSEADMQDQMDQFTYIM
Sbjct: 242 GKGDKAANGAHSMEVSTAMDNQQERSATDNTQAAEGGSNHGATLSEADMQDQMDQFTYIM 301
Query: 305 HQKFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
HQKFLLGED+EHLDYSKIDNDETLDDHW+REANDDAEEKYFDED
Sbjct: 302 HQKFLLGEDNEHLDYSKIDNDETLDDHWLREANDDAEEKYFDED 333
BLAST of Cmc06g0177851 vs. TAIR 10
Match:
AT5G47090.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052, coiled-coil (InterPro:IPR018613); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 313.9 bits (803), Expect = 1.6e-85
Identity = 199/342 (58.19%), Postives = 241/342 (70.47%), Query Frame = 0
Query: 5 ETVAAKGLSCEAMDCLSERLSLQEDLYFPRALQSTASNPSQRKAILLDLLSRDVAVFLER 64
E KG + E ++ERLS ++LYFPRA+Q TA++ QRK+ILLDLL RD AVFLER
Sbjct: 11 EATTMKGTAAED---ITERLSSLDNLYFPRAVQLTAASSDQRKSILLDLLRRDPAVFLER 70
Query: 65 YGSQLTSNELHEFDALKDDYEINWHLKHLRSIKSPTSDELHTRSVIVKNRRRAYLSKLIY 124
YGS+L +EL EFDA+K DYE++WHLK+LR SPTS+E+ +RSV V+NRR AYL+KL+
Sbjct: 71 YGSELLVDELLEFDAMKHDYEVDWHLKNLRKKISPTSEEIKSRSVAVRNRRLAYLNKLVS 130
Query: 125 DGQYFSEDAMREREPFLHHEYVGKFQDPSGRGMARPGERWSETLMRRSEEAMLVAKIRGE 184
+GQYFSEDAMR+REP+LHHEYVGKFQD GR MARPGERWSETLMRR+EEA+LV +IR E
Sbjct: 131 EGQYFSEDAMRDREPYLHHEYVGKFQDVMGRNMARPGERWSETLMRRAEEAVLVTRIREE 190
Query: 185 QRRLGVAERDLVGNNVNQGEEEEEEEEEEEEEEEEEKEKEEEKEKEEEEEEKEKEEEGED 244
Q+RLGV+E D VGN E+ EE EEEEEEE EE EEEEE++E + E
Sbjct: 191 QQRLGVSESDWVGN------EKMEESEEEEEEESEE---------EEEEEDEEAKNPTEA 250
Query: 245 NNKPENGVDSMEVTRAMDDQHERPATENSEGAEGGSNHVATLSEADMQDQMDQFTYIMHQ 304
++ NG +Q E+ T L +MQD MDQFT IM Q
Sbjct: 251 SSSSLNG----------KEQKEKATT--------------VLPPEEMQDMMDQFTSIMEQ 310
Query: 305 KFLLGEDSEHLDYSKIDNDETLDDHWMREANDDAEEKYFDED 347
KFL GED +HLDY+KIDNDETLDDHW+RE DAE+KYFDED
Sbjct: 311 KFLSGEDHQHLDYAKIDNDETLDDHWLREIGRDAEDKYFDED 310
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008448764.1 | 8.5e-174 | 98.86 | PREDICTED: coiled-coil domain-containing protein 97 [Cucumis melo] | [more] |
XP_031737463.1 | 2.6e-162 | 92.84 | coiled-coil domain-containing protein 97 [Cucumis sativus] >KGN55829.2 hypotheti... | [more] |
XP_038906003.1 | 2.9e-158 | 89.68 | coiled-coil domain-containing protein 97 [Benincasa hispida] >XP_038906004.1 coi... | [more] |
KAA0041038.1 | 1.7e-150 | 83.53 | YTH domain-containing protein 1 [Cucumis melo var. makuwa] | [more] |
TYK12071.1 | 1.4e-147 | 82.37 | coiled-coil domain-containing protein 97 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BKG3 | 4.1e-174 | 98.86 | coiled-coil domain-containing protein 97 OS=Cucumis melo OX=3656 GN=LOC103490832... | [more] |
A0A5A7TDJ3 | 8.3e-151 | 83.53 | YTH domain-containing protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A0A0L5C7 | 3.9e-148 | 67.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017060 PE=4 SV=1 | [more] |
A0A5D3CJT9 | 6.6e-148 | 82.37 | Coiled-coil domain-containing protein 97 OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A6J1F5X8 | 1.1e-145 | 84.88 | coiled-coil domain-containing protein 97 OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
Match Name | E-value | Identity | Description | |
AT5G47090.1 | 1.6e-85 | 58.19 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2052... | [more] |