Cmc06g0177011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0177011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Inorganic diphosphatase
Location	CMiso1.1chr06: 33823786 .. 33824462 (-)
RNA-Seq Expression	Cmc06g0177011
Synteny	Cmc06g0177011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGGTTTTTGTTGTGAGTTTTCGCCAGCTCTCATAGTCTTTTTCTTTGCCGGATCTATAGTTTTCGTCTTTTCTTTGAGTTGATTTGAGTTTTCGGTGTAGATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGGTGTTTCCCTTTTCTTAAATGAATTTGAAAAGAATTAATTGGGACTTTAAGATGAATAGGTTTGATTGGAATTAATGAATTGGGGAGCCCTTTAATGGATATTTAGAATATCATGAACTGTTGTTGACTGCGAGGGTGCAAAATCATAGAGTACCGAGACTTTGTTGTTCTGTGTGTACTGTAGCAGAATCCCATATATGTAAATGTGCACCTTTTATTCTGATTGTCTAACAATTTCTTTGAAGAGCTGCGAATAGAAGAATCGCG

mRNA sequence

ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGGTTTTTGTTATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGGTGTTTCCCTTTTCTTAAATGAATTTGAAAAGAATTAATTGGGACTTTAAGATGAATAGGTTTGATTGGAATTAATGAATTGGGGAGCCCTTTAATGGATATTTAGAATATCATGAACTGTTGTTGACTGCGAGGGTGCAAAATCATAGAGTACCGAGACTTTGTTGTTCTGTGTGTACTGTAGCAGAATCCCATATATGTAAATGTGCACCTTTTATTCTGATTGTCTAACAATTTCTTTGAAGAGCTGCGAATAGAAGAATCGCG

Coding sequence (CDS)

ATGTCATTTCCTTTTTGCCAGACTTTTCATGTTAGACTTCCACGTGATTTCCATTTTGCAGACTCTTCCTATTCGTTAGATTCTCCAAGTGATTTCCTTTTAGCCAGACTCTTTCTCTTCACCGTCAGATCTATAGTTTTCGTCTTCTTCGCACGATGTGGGTTTTTGTTATTTTTGCCAGATCTGTGTTTCATTTCCCTCTCCAAAAGACTACCCTTCTCCTGCAGAGCTTTGTATCTCCCTGAGGTCAAGATCAAGGAGGAAGGCCAGCCTGAAACCCTCCATTATCACGTCTTCATCACTGACCAGTCCGGCAAAATGGTGTTTCCCTTTTCTTAA

Protein sequence

MSFPFCQTFHVRLPRDFHFADSSYSLDSPSDFLLARLFLFTVRSIVFVFFARCGFLLFLPDLCFISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPFS

Homology

[Close]

BLAST of Cmc06g0177011 vs. NCBI nr
Match: XP_038887279.1 (soluble inorganic pyrophosphatase 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-11
Identity = 41/53 (77.36%), Postives = 43/53 (81.13%), Query Frame = 0


Query: 64  FISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF TDQSGK V P+
Sbjct: 37  FISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFFTDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. NCBI nr
Match: XP_008455105.1 (PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis melo] >ADN34257.1 inorganic pyrophosphatase [Cucumis melo subsp. melo] >KAA0031418.1 soluble inorganic pyrophosphatase 6 [Cucumis melo var. makuwa] >TYK06869.1 soluble inorganic pyrophosphatase 6 [Cucumis melo var. makuwa])

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11
Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 49  FFARCGFL--LFLP-DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 108
           FF++  FL    LP +  FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

Query: 109 TDQSGKMVFPF 112
           TDQSGK V P+
Sbjct: 79  TDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. NCBI nr
Match: XP_022927837.1 (soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK V P+
Sbjct: 36  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVSPW 91

[Close]

BLAST of Cmc06g0177011 vs. NCBI nr
Match: XP_023530049.1 (soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK V P+
Sbjct: 38  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVSPW 93

[Close]

BLAST of Cmc06g0177011 vs. NCBI nr
Match: KAG6588731.1 (Soluble inorganic pyrophosphatase 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 77.4 bits (189), Expect = 8.7e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK V P+
Sbjct: 42  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVSPW 97

[Close]

BLAST of Cmc06g0177011 vs. ExPASy Swiss-Prot
Match: Q9LXC9 (Soluble inorganic pyrophosphatase 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPA6 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.6e-07
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 62  LCF----ISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           LCF    + L  + PFSC A+Y P+VK++EEG  E+L Y VF  D SGK V P+
Sbjct: 40  LCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVSPW 93

[Close]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL
Match: A0A5D3C940 (Inorganic diphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001730 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 49  FFARCGFL--LFLP-DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 108
           FF++  FL    LP +  FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

Query: 109 TDQSGKMVFPF 112
           TDQSGK V P+
Sbjct: 79  TDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL
Match: E5GCQ8 (Inorganic diphosphatase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 49  FFARCGFL--LFLP-DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 108
           FF++  FL    LP +  FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

Query: 109 TDQSGKMVFPF 112
           TDQSGK V P+
Sbjct: 79  TDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL
Match: A0A1S3C048 (Inorganic diphosphatase OS=Cucumis melo OX=3656 GN=LOC103495360 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.9e-11
Identity = 47/71 (66.20%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 49  FFARCGFL--LFLP-DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFI 108
           FF++  FL    LP +  FISLS+RLP     FSCRALYLPEVKIKEEGQPETL Y VF 
Sbjct: 19  FFSKTSFLPNHTLPFNSNFISLSRRLPSSRKSFSCRALYLPEVKIKEEGQPETLDYRVFF 78

Query: 109 TDQSGKMVFPF 112
           TDQSGK V P+
Sbjct: 79  TDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL
Match: A0A6J1EIB4 (Inorganic diphosphatase OS=Cucurbita moschata OX=3662 GN=LOC111434605 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.2e-11
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 61  DLCFISLSKRLP-----FSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           D  F+S S+RLP     FSCRALY+PEVKIKEEGQPETL Y VF TDQSGK V P+
Sbjct: 36  DSNFLSFSRRLPSSRKSFSCRALYIPEVKIKEEGQPETLDYRVFFTDQSGKKVSPW 91

[Close]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL
Match: A0A0A0K2R2 (Inorganic diphosphatase OS=Cucumis sativus OX=3659 GN=Csa_7G067480 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 9.3e-11
Identity = 48/79 (60.76%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 41  TVRSIVFVFFARCGFL--LFLPDLC-FISLSKRLP-----FSCRALYLPEVKIKEEGQPE 100
           T  S    FF++  FL    LP    FISLS+ LP     FSCRALYLPEVKIKEEGQPE
Sbjct: 11  TTTSAASSFFSKTSFLPNHTLPFTSNFISLSRTLPSSRKSFSCRALYLPEVKIKEEGQPE 70

Query: 101 TLHYHVFITDQSGKMVFPF 112
           TL Y VF TDQSGK V P+
Sbjct: 71  TLDYRVFFTDQSGKKVSPW 89

[Close]

BLAST of Cmc06g0177011 vs. TAIR 10
Match: AT5G09650.1 (pyrophosphorylase 6 )

HSP 1 Score: 55.5 bits (132), Expect = 3.3e-08
Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 62  LCF----ISLSKRLPFSCRALYLPEVKIKEEGQPETLHYHVFITDQSGKMVFPF 112
           LCF    + L  + PFSC A+Y P+VK++EEG  E+L Y VF  D SGK V P+
Sbjct: 40  LCFSRRALVLKSKRPFSCSAIYNPQVKVQEEGPAESLDYRVFFLDGSGKKVSPW 93

The following BLAST results are available for this feature:

BLAST of Cmc06g0177011 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887279.1	1.3e-11	77.36	soluble inorganic pyrophosphatase 6, chloroplastic [Benincasa hispida]	[more]
XP_008455105.1	3.9e-11	66.20	PREDICTED: soluble inorganic pyrophosphatase 6, chloroplastic [Cucumis melo] >AD...	[more]
XP_022927837.1	8.7e-11	69.64	soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita moschata]	[more]
XP_023530049.1	8.7e-11	69.64	soluble inorganic pyrophosphatase 6, chloroplastic-like [Cucurbita pepo subsp. p...	[more]
KAG6588731.1	8.7e-11	69.64	Soluble inorganic pyrophosphatase 6, chloroplastic, partial [Cucurbita argyrospe...	[more]

BLAST of Cmc06g0177011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXC9	4.6e-07	50.00	Soluble inorganic pyrophosphatase 6, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Cmc06g0177011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C940	1.9e-11	66.20	Inorganic diphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
E5GCQ8	1.9e-11	66.20	Inorganic diphosphatase OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3C048	1.9e-11	66.20	Inorganic diphosphatase OS=Cucumis melo OX=3656 GN=LOC103495360 PE=3 SV=1	[more]
A0A6J1EIB4	4.2e-11	69.64	Inorganic diphosphatase OS=Cucurbita moschata OX=3662 GN=LOC111434605 PE=3 SV=1	[more]
A0A0A0K2R2	9.3e-11	60.76	Inorganic diphosphatase OS=Cucumis sativus OX=3659 GN=Csa_7G067480 PE=3 SV=1	[more]

BLAST of Cmc06g0177011 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09650.1	3.3e-08	50.00	pyrophosphorylase 6	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0177011.1	Cmc06g0177011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006796	phosphate-containing compound metabolic process
biological_process	GO:0019538	protein metabolic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004427	inorganic diphosphatase activity
molecular_function	GO:0000287	magnesium ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity