Cmc06g0175621 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0175621
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	BEST Arabidopsis thaliana protein match is: embryo defective 1303 .
Location	CMiso1.1chr06: 32449455 .. 32461728 (-)
RNA-Seq Expression	Cmc06g0175621
Synteny	Cmc06g0175621

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGCTCTACATATTCAAGGACGAGAGATCCGAGTTCAAAATACCCTACTAGAAAAAAGATCAATAATAAAAATAATAACTTTCTTTTCACATTACCCTTTTTTCTTCTTCTTCTTCTTCTTCTTCCTGCCTCTATCACAAAAGAGTCGTCGCCAGGAGCTTCACCGCCATATCTCTCTCCATAGCGAGACCTTCCGGAATCTCTCCTCCTTTTCTCTTAAGAAAGCTTTCCAGCATTACCCTTTTGCGCTACTTTGTAGAGACGAAGCGCGTTCATCCTCGGCTTTCTCGTATCTCAAAAGGTTCGGTTTTTTTTGCAATTTCTCTATTAATTGTGTCCCCCTATTCCACTATTGAAAGATTATCGTGTTCTTTATGTTTATGGTTGTGAAGCTTGTAAGTTCTTGTGGTAAAGTCCACTTATTCTTCTTTGCTTCATGTTCTCGTTGAATCCGAAAGAGTTATTCTAGCATTCGTGTTGGTATTTTGGAGTAAATAGAATTGGGTTTCTATGTGAATTTAGAGTCATTTCTTGAATGTTGTAATTTCAGAGTTGATGCTTTTGGTTTTATTTCAGAACACGACTCTATTCGGATTTTCTATTTTATTTTATTTTTATTTTTTGGATTCCTGTGAAGAGGAAAATCATTTGTGTGGAAATTTCTTGCTGTAAAATTTTTGGCTTGGGATCTTGTCTCTATTGGCAGGGAGTTTCTTGGTATGGGATGGGGAATGCTTTAGGGCAAGGGGATGGGATGGGGAAGCCAGTTCGTTTCTTCTATGGAAGTGAATTACTTCTTTTGAGGTTTATGTTGTTGTAAATAATTTCAGTATATATGAAAAATATAAAAAACATTGACAAGTTTAAAAAATTAAAGGTGGTATAAAAATTCGCTTTTTTGGTGTATATTTCTTAATTTGATTACCTTTACAAGAAAAGTTAAAAAGAGATAAAGGTCATCAATTCAAGCACGATTGAAGTGAAACCAAATTGAACTTCTGAATGGAACCAAACTAATCTGTGCTTGATACTTGATGGGTTTTGTTTGGTTCTATGCCCAATGTCCAAAACTACTATGGGTTGCCATTGTCCCAGTGGTCAATAAGAGCCCACGTAGGTGGGAAGGACTTATGGGGAATGGGTTCAAGTGATGGTAACTAGCTACTTCAGATTTAATATCCTAAATTGCCTTGGCAACCCAATTCAAATGTATTAGGATTAGATAGGTGTTTTGTGAGGATAGTTAATAAGGTGCTTGCAAGTTGGTGTCGACATTCCCAAATGTGAAGGGAAAAAAACCCCAATCTTTGGTCTCAACTGGACTTTGGTTCATTGCAGTTGAAAATAAATTATTTTAGTTCAAACCAATAAAACACATTTTTTAAAATCTTTGGATATTTGTTTCTTAAAGTTCCTGAAACAGCCCACCAAGTCCATAGCAATTAGGAAGGCATAAGTTAGAGCTAGTATGCTTGGCATGGTTGGGGGTGGGTTACCTTGTTATGTAAATTCATAGAAATATTCATATCTTGTGCTAAAAGTCAAATGGAAAGAGGGTGATTGCTGTGATGCTGTCTAATACAAAGTGCTAGAAGCCATATGGAGAAAGGGTATTTCTACAGTGTCTAATAAGTTAATTACATAATAAATTTCTAGGTTATGAGAATCCAATCCGCATGAATTTAAGGACTGCACACTTGCTCCATTTGCAACATGTGTACCACTTTAGAATCATATTTCACCTGAGTTCATTATTCAACTAGATTAATGTATCTCTTTTGGTGTTACATGTTTTTAAGAACATAATTATTTTAGTTTACTGTCGGAGAGAAGCAAGTACTGGTTATGCATGGTTCTAGTGAGCCTAATAGAGTAAGGCTATGGTTTGGGCATTTGGAAGTTTTAGTGGATTAGAATTTTGAAGGCAAAGCTAAGGATCATACACGCCCTTCTTCCCTTTTGACCAGTTGGAGATCTATCATGTAACTCTATTGTCTTGGGCTTCGGCCTTATTTTATAAATTTCATATATCAATGAAATTTATTTCCTATAAAAAAAAAGAAAAAAGAAAAAGGCAAAGCTAAGGATTTTAATATCATTGTTAGTTTCTTTAATTTTTTTCTTTGGGAAGTGTGCATGTAGAGCTCCTTTGAAAGAGAAAAAGCAAAGAACTCTTGAATGTAAAATCTCTATGTTTGAGTTTTATAGTAGCGTACCACATTCACTTCATGGTGATGTAGTTATAGTTTTCCTATGGAATATGGCTATTAATTTTTGCGAGGCTCTTATTTTATAGTTCTTTTGGGGTGTTCTTTCCTGTACCCCCTCCCCTTTTTGTGAGAAGGGGAGGTTTCTGTGGCTAGCTGGGTTGGTTTAGATTTGTGGACCTTTTTTGTGAGAGGAACCATAGAACCTTTTGATGAGGACCTCGAGCACTATTTGATCATTTATAAGTTTCCATAGGCTTTTGTAATTACCTTTTTGGTCTTATTTTAATTGGAGTCCCCTTCCTCCCCTTTTGTTGGCTTTTTTGTTGTATGGTTGGGCATTCTTTCGTTAGGGAAGTTTGATAATTCACATAATAAACATACAATAAACAACCATCAATACAATCAACAAGCAGGATTAGTGTAATACTGTAAATGTCTTTTATTTTCTTTACTCCTTTTTTCTTTTGAGGTCTATGATAATTGATATCCAACAGTGTATTGGCCAAAATGATTTATCATGGTCAGTACCTTAGGGGTTTGACTTCCAATCCAGGATTTAAGGTTTGAGACCAGATATTCTGTGCCTCAAGGCCCTCAACAACCTTCTCATGGCTTTTTCCTGTATACATATTATTATATAAAGTTATAACCAATAAAAGGGACAGGTCAAATCCTCTTAATATATGCGAAAATCAACCTAATGTCTACTGTATACCTTCTCAATCGCCACCTTCCTCCTGCTGTCATCCAAGGTAGGGCCTTATTGTATCAGCTAGCTCCCTTTACTTATTTATTTATTTTTTGAAGTGCGCAGTTTGTTTGTTTACCTTGTTATAGGAAATTCAATCTATTCTCATTTTATTGGTGCATTCGTCTCAGAAATTCTTGTACGGTTTCAGGTTATCATCTACCCTTGTAGATGGAGATGCTTACTACAAATTCTGCTGTGATGCTACCTCTTCTACCCCCAGGTACAAGCAACTAAATTCCATATCCGTTTATTGATTTGATGTAAGCAGAAATGAACGAGTTTTGTTATATGTAAAAGAAAAATGTTGAGTACAAGGGAAAGTGTTAGATCTCAATCCAACACAATCTCAGAATAGAAAGAGCAACTTTATTGAAATGTAAAATGCTGAATACCATAAGAAAGATGGAATCAATGAATTACGATATGTAATTCATTGACGTAAGAAACTATCGCTGAAAACTCTCTCACTAGAGTTGCAGTGCCCACTACTCAATGAAAACATTCTCCGCCCATTCCCACGTAGCTTCATGATTGGGCAATCCTTTCCAACTCATCAATACCTCCCCTTCTCCTTTAGCATCTTTCTGGTAACCATAGGCTTCATCAGGGATTGCCAGCCATTCGTGGTTTTCTGTCATATATGGGGCCGATTCTTGCGGATTCTGGCAATCTCCAAAGGCTCTTTTCAGCTGGGAAATGTGGAATACTGGATGAATCGTTGCTGATGGCGGCAACTCCAATTTATATGCCAGAGTTCCTATTCTTTTTAAGACTTCGTATGGCCCAAAATATTTAGGCGAGACAACTTCTCATTTCTCCTTTTTCTCATAGAAACTTGTCTATATAGCCTCAATTTCAAATAAACCATATCACCTTCTTCAAATTCTACATGTGTTCTCTTTAAATCAACATAGGTCTTCTTCTTTTCTTGAGCCACTCTCAAATGCTCTTTCAATGCTCCCAAGGCCTTGCTTAAGTTGATCATCAAGTGTGGAATTAGGGGTGCCGAGATCTCCATAAAACACTAATGGTGGGGGAGTTCTGCCACAGCTTGAAAAGGAGAAACTCCAAGTGCCCTCTGGTACGTCGTATTATACCAGTACTCCGCCCAATGGATCCATTTATTCCACTCCTTTGGCCTTTCTCCACAGAAACAACGCAAGTAAGCCTCATGGATCGATTGACCACCTCAGTTTGCCCATCCGTTTGGGGATGGTAAGATATGCTTCTATTTAATTTCGTTCCGGCCAATCTGAATAACTCCTTCCAAAAATGGCTCAAGAAAATTTTATCACGATCCAATACAGTCGATTGCCTAATCACTTCCTTCACAAATAATTTTGCCACAGTCTTGGCATCAAAAGGATGTTTAATGTGAGAAAGTGGCCATACTTACTGAAACGATCCACCACCACTAAAATCACTTCAAACCCGGCTGCCTTTGGCAATCCTTCTATGAAATCCATTGAGATGTCATCCCAAATCCTGCCGGGAATTTCCAATGGTGTTAATAAGCCTACTGGTGATAGAGACAAGGATTTATTCCGTTGACACACAACACATTCTTAGCAATATTTCTGTACATCTCCCTTCATTTCTTGCCAAAATAACTCGCCTGTTAATCGTTTATATGTTCGCAAGAAGCCCGAGTGACCCCCAAACACTGAATCATGGTATGTATGAAGAATAGTAGGAATCAACGATGACTAACCTTCCCTTATATTGGAGCATATCATGCTGCAATGTGTACTTCTGTACTTCTTCCCTTCTTTAATTCTTTTAATAATCTGACTCAAGTGATCATCCTTCTCTACTTCTTTTTTGATGATCTTTAAATCAATCAATGCCGGAGCTGTTAATTGTAGATGCACCACAGGAGGTACTCTAGATAAGGCATCAGCTGCTTTATTTTCCAGACCGGGCTTGTATATGACTTCAAAAGAGTATCCTAACAGTTTCGCAATCCATTTCTGGTACTGAGGTTGGATTACCCGCTGGTCAAGTAAGAATTTTAAGGATATCTGACCAGTTTTAACAACAAATTTTCTTCCTAGCAAATAAGGACGCCAACGTTGGACAGCCAAGACTACCGCCACTGGTTCTCTCTCATATACAGGTTTGGCTCGGTCCCTCAAAGCCAAAGTTTGGCTGAAAAAAGCCATCGGCCTTTTCTTCTGCATTAAAACCGCTCCTATACCATGGCCAGATGCATCGGTTTCCACTTCAAATGGAAGATTAAAATCTGGTAAGGCCAACGTCGACAATGTCATCATGGCTTCCTTCAGTCTTCCAAAAGCCAATTGAGCTTCTTCACTCCGTCTAAAATCCCCTAATTTCAACAACTGAGTTAATGGAGCAGCAATGGACCCATAATTTTGTACAAACCTCCGATAGTAACCAGTGAGCCCCAAGAATCCCCTCAATTCTCTCACATTTGAAGAACTGGCCATTGTTTAATGGATCTGATCTTCTCTGGGTCAACCTCTACTCCTTGACCTGAAACGATATGGCCAAGATACTCCACTCTTTGAAATGCGAAGCTGCACTTCTTCTTATTAGCATAGAGTTTATGTTCACGTAATACTTCAAATACCAACTCTAAATGATATATATGCTTTTCCATACCTCTACTATATATCAAAATGTCATAAAAAAATACCAGAACGAATTTCCTCAGATAAGATCGAAAAATAGAGTTCATGGGAGACTGGAACGTGGCTGGTGCATTTGTTAAACCGAAGGGCATCACTAAAAATTCATAGTGACCCTCATGTGTCCTAAATGCAGTTCTCTTTACATCTTCCTTATGCATTATGATTTGATGGTATCCAGCCTTTAAATCAATTTTAGAAAACAGGTTTGCACCTTTCAATTCATCAAATAACTCCTCTATAACTGGAATAGGAAACTTATCTGGTATGGTAACGTTGTTGAGTGCGCGGTAATCCACACAAAATCTCCAGCTTCCATCTTTTTTCTTAACAAGTAGTACTGGGCTGGAATAAGGACTAGAACTCGGCTGTATAATTCCAGATGACAGCATCTCATCAACGAGCTTCTCCATCTCTGCCTTTTGATGAAAAGCATATCTATATGGCCTGATGTTCTCTGGGTTTGTTCCTGTTTTCAAATGAATCTGATGCTCAATTGATCTCCTTGGGGGTAAGGATTCTGGCCACTCAAAGACATCATTAAATTTTTCCAATACATTCTGCGTATTAGTATGCACCACATTAGTTTCCTTTTCTGCACTTTCTTCAGTCAACATTACTCCTTCTAGTGCTCTACACTCAACCAAGTAACCCTAATCAGAATCGGTCCATGCTTTCATCATTGACTTCAACCCAATTCTGGTTTTTGTCAAACTCGGATCTCCCTTGATGATGATTTTTTTTATCTTCATGAAAGAAAGTCATGGTCAAATTCCTCCAATCTGTCTCAGTAACACCTAGAGAATACAACCACTGCATAACTGCATCCCTAAAATTGCGTCCACCCCTCCTAACTCCAAGGGTAAGAAATCTGCTATCACCTTTCACTCGTTCAACATTCTCACAGACTCCCTTCCCTTTAATGGCAGTTCCAGAACCGAGGATCACACCATAATGGACGTTTACTTGGTATGCAATTTCAACTCATTCACCAACTTCTTTGAGATGAAGTTATGAGTTGCCCCACAGTCAATTAGTACTAATATTTCTTCTCCTTTCAGTTTTCCTCTTACTTTCATAGTCCCTAGATTGGTTAGGCCAACCACTAAGTTGATGGATAACTCCACCATTGCATTAACTTCTCCCTCTATCTCGAACATATTCTACTCTTTTGGCTCTGCACATTCTTCTTCTATGATTTCTTCCTCCACATTGTTTTCGTGCACACAAACATTCTCAACTCTCTTACTTCGGGTTCTTTGCACTTATGCCCAGAGTGATACTTTTCATCACATTTAAAGCACAGTCCCTTCTCCCTCTTGGCCTTAAACTCTGCATCAGAAAGGCGTTTGCTCGGGCCTTCCTTTCTTGGTTCACCATTCGCAGTGCTTCACAGAGTAATGGTTCTCATTGGGGTTGATTGATTATTCTTTCCATCATTCCATGTTACAGCAGCATTCAGGTTGTTGTAATTAGCTGGATTATAAAGGTACCTTCCTCCAGCGTACCCATACAAATTGGCTTCTCTTCGAATAATCTCCCTGATCTCAGCCTTCAATGCTAGTCGCATCATCTGTGGTAGGCCAATCGGTTTAGAGTACTCAACTTCTAAGGTTTCCTCTAAAACCTTATCGGATAAATCGGAAAGTGGTGCCACAAGTCGATCAAATAAGTTTCGATATTCCTCAACTGTTGTCATTTGTTTAATGGCGAAAAATCTGCCATATAAAGATCCTTCACGAATTGACCGAAATCTCTCTAACAACCTGCTTTTTAAATTCGACCAGTCAGTGAACTTATTTCGTTGCTCCTGAGAACGAAACCAGTCAAGTGCTGGGCCGTCGAAGCTTATAACCGAAACAGTCATCTTCTCGAAATCGGTTTAACTTGTGGATCTGAAAATAACGATTGGCTCTGAATAACCATGAGTTCGGATCGCTTCCCGTAAACACCGACATTTCTACATTTTTAAACTTATTCCGTTCGACAGTTTTATCTTCTTTGTCTTTCGCTTCTTTCTTGGTTTCATCATTTGTTTCTTTGCTACTTACTACTCCTTTCGAGTAAAATGATCCTTCCATATCGGAAGTTGTACCAGACGTTAACAATGCTATCCATATATTTCATAATTACTTGGTATTGTTGCTGCTGTGTATCGGCTTTCGAACTCAACTTATCCAGGTTCTTCATCAGTGTTTGATTCTGTTGTTGTTGCTTTTCGTTTTGCACGTTCATACGTTCGATTGTCTTCATGATCGTCGACAACTTTTCTTCTACCGCCGGCAACTTCTGCAGATCCTTCTTCATCTCTGAAGCTTCTTGTTCCAACGCTTCAAACCGTTCCTCATGCTTCTTTTCCATTTTCTTTGGTTTCCCCAGGATTGTATGCTCTGACACCAATATGTTAGATCTCAATCCAACACAGTAATCTCATAATAGAAAGAGCAACTTTATTGAAATGTAAAGTGCTGAATACCATAAGAAAGATGGAATCAATGAATTACGATATGTAATTCATTGACGTAAGAAACTATCACTGAGAACTCTCTCACTAGAGTTGCAGTGCCCACTACTCAATGAAAACATTCTCTGCCCATTTCCTCTCTCCTCTCCTTATTTATAAACTTCCAGGTGGTCCCCCCTATAACAAACAATTCTAACATAAAGATGGTCCCCCTATAACAACCGACTCCTACATATTCTTTACTGCTTTTTGCTAACATCTCTATTCCTCCTATGGTAGGGAAAGTAAGCGGGATAATCAATAATGCCTTTCCCCTACCCAGAAAGGAGCATGTAAGAAGCAACCTGTGTCTAATTTGATTGGAGAAGTAAGTTAAAGTCAGAATTCGATCTATTTCACTCGACTCACTTATGCAGGAGGTGCTGTACTACATTATACAATCCAAGAAATTCTCAAAAGTCTTAAAAATATCCTTTAGGATTATTCTTTCGATCTAAAGTTAGCCATAAAATTGCTGTGGAAGGAATTCCACGTAGAAACCTACCTTTCTGTTCACTTTTCAGCCATCAGCCCACAAAACTTTTGAAAATGAGGGATCTCACATTGTTCAGGAAGCTCTAGAAACCTAAATTCAACATTACGAAAATTCCAGCTTTTAGTGGCAACTCACTAGAGGAATTGATGTAAGAAGACTCGGGGTTAATTGGGTTATTAGGTAATATTCTAGGTTAATTCCCTTTTTACCCCACTTGTAATAGAACTTTATAAATAGGAGTTTCTCTTGTATGAAGCACATTATTCATTCTAATAAAAGATTCACAATCTTGGTTCTAGGAGAATTTCTCCTTTAGGTTACATCAGGAATAGATGGTCTATATAGGAAGAAGTTGACTTTGTGTCGACCCCTCTCTAATCAGGTTAGTTATGTTGGTACCTGAAGTTGGGTTTTTTTGTTTAGTTAGGTAGACAAGAGAAGACTTGCAAGAGTGTGCCCTGAAATTATCAAAATTCTTTGAAGAGATGTTACATGCTCTCATAATAATAATATCTACATTGGTTTACTGGTTTATTAAGTTGGGGAACAAATAATTTAGTTGGTACAGATCCATGCAATCTGATTGTGAAAACATACATCTTGATCATTCTATGGAACATATATTTATTGACACTCAGTTGATTGGAGCAGTCAAGTTTCGCTGATAGTTGTCAATTGTGATAACTTAAGATTTGTTAAATGCCTCGATCTTTGTGACATAACACGTCTCCATCGTGCAATTGTCAAAAGTTTTTTGGTGTTTAATGCACTACATAATATATGTACTTTTCATGTAACCCTGTGTTGTACCCGAGCTTTTAATTTTCAATATATTTTTGCTCAGACTAAATAATAAATGTTATTAACTTATGCCATCTTTTAGATTTAAGAACCATTGTAGTTTCATGGTTTCTTATGAGTTATGAAGTTAAAAAGTAATGGTTTTTGTTTAAATTAGTCTTCTATTACCATTATTCTGAGAAATTTTTTGATCTTTAGTTTTAACATTGTCTTTGTTAAATAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGGCGGTATAGTTCCCAGCATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCGGTATTTCTCAAACCAATTCCATCTACTGGGACGAAGGGAGGCATTCTATGTTCAAGTAGAAAGAACAGTACTTTCATTTGTTTGGCTGCTTTGGTAAGTTGGTTTTTATTAATTGGTTTCTCTTTTAGAGCTTCCTCATTTTCTTTCAGCATTGAGTTTGTCTGTTCTCTTTTTACTTTTCCTCAGCTGGTAATAGTTTTTTTATATCAGAAACATTATTGTACAATGTTAACTGTTAAGCTTAGAATATGCCAAGGGAGATTTCGTAAAGGCTTACCATTTTATTGAATTGAGTTGGGGCTTTGGATGGTGAGGAATCATAGAGTTTTCATAGGGTGATACGTACGTGAAGGAGTTGTTCCTTGATTTGGGTCTTGATGGCTAAGGTCATTAGGGTGCCTTATTCATTCAGATTAGAGCAACCCCCATTTTGTACTTCTCTGGCTCTGTTTTTATTTATGGCCCTGTAAATGATAAAGCTTGATTTAGTTATCAATATAGGTTCTGAATCTAGGGAAGATTTAGAGAGCTTCCCTTCCCTCCTAAACAGTAAATACAATTCTCACAAAATGACTTGAGCAGAAAGATCACCTCTCTAGCTCTTTTCTTCTCTCTATGATCCACTGATCGCGTCTAGTCTATGCAAGGTTTTAAAAAGCCGTTGAGGTTTACACTTTGAGGCTCGCCATGAGAAAGTCGCTTGACTATATTTATCTTTTAGGCTTGTGTGTTGGTAAAAAGCGCACGGAGGTCCCCTATGGTAGTCACCTACTAAGGAATTAAGATTTTTTGAACTATTAATGATAGTAGTAGTTAGGCTAGAGATATCCTTTTAAATTTTTTTTATTTGAGCGGAAAGTTGGGGGGGGGTGATTTTTTTTTTTACATTATTGTAGAACTATGTTTAACATTACTTGGTCATACCAATTTAGGATTTGTAAAATGTTTTTAGTTCAATTTGAAGATTATGCCTCACCTCTTCGATATGAAAAGCTTCAATTTTTTTTTTATATCTGTGAGGGTTCGAGCCAGCTTACGCGCACCTAAACTAATTTCACAGGACACCTGCCTGACCCTACAACATTTGGGTGTCAAGGAAATTCGTAGGAAATTAATTCCTAAATAGGTGACCAACATGGATTGAACTTATGACCTCTTAGTTAGTTACTGAGACCATGTCTCTCTTTTTACCATTAGGCCAAACCATGGTGGTTGAAAGTTCCAAAATTGTTTTAGCCTCTCCAAACATTGCGTTTATTATATTCATGTTACACACAATTTTTTCATCCACCTAAGATTGCGTTTATTATATTTATTATATTCATGTTACACACAATTTTTTCTATTAGTATCTACCTGAATGATTGTTTGAAGCAACATGACAGACTGAGTGGTGAATGGATTTGATTTTTTTATTAATAATCATAGTAAAGAAGAAAATAGTTGAAGACTTAAACAGAATATTTGAAAGAGGGATTTAGTTAAAGACTTGAATAGAATATTTGAAAGACGGATTAAAAGAATAGAAAATATACATAATGATACTTTCTCTCTGCAGAATGCTCGATGTGCAGCGGAGCAGACCCAGACAGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGTAACAATCACTTGCATAAATTTTATGAATAATAATAACTTTTAACAGCAATCTTCCTAGCAGTAAGTTGCATATCACACTCCGATACTCCTTGCAAGTATCATGCCTCGCTATGTTCTTACCTATTTGTCTCTCTCCCTACCACACACACACGGACTTGCCATTGCGTAATGTTTGCTGTTGTAAGCTGTACTTTTTTACCACGCACTGTTACCTAGTACTAAAATTGCAGGCAAGGAGAAGTCACCGCAATTGGATGATGGCGATTCTGGATTTCCACCTCGAGATGATGGTGATGGTGGCGGCGGCGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGGTTCTTCTTCTTTGGTTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAAAGAAAGTGAAGGGCCATATCAGGATGATCGGAGAAGATAAATATACTTCGATTAAACATATGTAGATTCTAAATTTATACTTCAATATACAATCTCATGATAAACGTTTGTTTCTAGCCATGTTAAATCGCCATTAAATTCCTTTCATCCATTCACTTGCCTTAAATTTAGTATAGACTGACATAAGAACATAAAGTTCCAAAGACATTTGGAATTTCAGTTATCAAAGATATAGCTGGTGAGGATAAAAGGCGATGAGTTCAACTTAAGTGATATAATGGATTTTTATCCTTGTAAGACAAAAAGATAGTAAGTATAGAAATGGTGGTAGGCAAAACTAGGATTTCTAAGCAGGTTGAAGGTTTGTTTTTTTGTTTTTAGTTTTCTTAGAATGAAAGGTCATCTCAATTATAGCGAGATAAGTTTTATTCGATAAGATTCTAGTTGTGAAGATGCCATATATTTTTTTATTTTATTAGATTTATGTTTCCATATTAATTGGGATTG

mRNA sequence

TTTAGCTCTACATATTCAAGGACGAGAGATCCGAGTTCAAAATACCCTACTAGAAAAAAGATCAATAATAAAAATAATAACTTTCTTTTCACATTACCCTTTTTTCTTCTTCTTCTTCTTCTTCTTCCTGCCTCTATCACAAAAGAGTCGTCGCCAGGAGCTTCACCGCCATATCTCTCTCCATAGCGAGACCTTCCGGAATCTCTCCTCCTTTTCTCTTAAGAAAGCTTTCCAGCATTACCCTTTTGCGCTACTTTGTAGAGACGAAGCGCGTTCATCCTCGGCTTTCTCGTATCTCAAAAGGTTATCATCTACCCTTGTAGATGGAGATGCTTACTACAAATTCTGCTGTGATGCTACCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGGCGGTATAGTTCCCAGCATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCGGTATTTCTCAAACCAATTCCATCTACTGGGACGAAGGGAGGCATTCTATGTTCAAGTAGAAAGAACAGTACTTTCATTTGTTTGGCTGCTTTGAATGCTCGATGTGCAGCGGAGCAGACCCAGACAGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGCAAGGAGAAGTCACCGCAATTGGATGATGGCGATTCTGGATTTCCACCTCGAGATGATGGTGATGGTGGCGGCGGCGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGGTTCTTCTTCTTTGGTTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAAAGAAAGTGAAGGGCCATATCAGGATGATCGGAGAAGATAAATATACTTCGATTAAACATATGTAGATTCTAAATTTATACTTCAATATACAATCTCATGATAAACGTTTGTTTCTAGCCATGTTAAATCGCCATTAAATTCCTTTCATCCATTCACTTGCCTTAAATTTAGTATAGACTGACATAAGAACATAAAGTTCCAAAGACATTTGGAATTTCAGTTATCAAAGATATAGCTGGTGAGGATAAAAGGCGATGAGTTCAACTTAAGTGATATAATGGATTTTTATCCTTGTAAGACAAAAAGATAGTAAGTATAGAAATGGTGGTAGGCAAAACTAGGATTTCTAAGCAGGTTGAAGGTTTGTTTTTTTGTTTTTAGTTTTCTTAGAATGAAAGGTCATCTCAATTATAGCGAGATAAGTTTTATTCGATAAGATTCTAGTTGTGAAGATGCCATATATTTTTTTATTTTATTAGATTTATGTTTCCATATTAATTGGGATTG

Coding sequence (CDS)

ATGGAGATGCTTACTACAAATTCTGCTGTGATGCTACCTCTTCTACCCCCAGTGGGTCAGCATTGGGGAAGAATGAAGGCCAAAGACTTACCTCTTAGGCGGTATAGTTCCCAGCATCAAACTCCTAATGGGAGGAGACAATCATTGTTTGCTAAAGCAGGACCGGTATTTCTCAAACCAATTCCATCTACTGGGACGAAGGGAGGCATTCTATGTTCAAGTAGAAAGAACAGTACTTTCATTTGTTTGGCTGCTTTGAATGCTCGATGTGCAGCGGAGCAGACCCAGACAGTTACAAGAGAGGCTCCTACAATCACTGTTCTTCCCGGCAAGGAGAAGTCACCGCAATTGGATGATGGCGATTCTGGATTTCCACCTCGAGATGATGGTGATGGTGGCGGCGGCGGTGGCGGCGGCGGAGGCAACTGGTCTGGTGGGTTCTTCTTCTTTGGTTTCCTTGCTTTCTTAGGCTTTCTAAAAGATAAAGAAAGTGAAGGGCCATATCAGGATGATCGGAGAAGATAA

Protein sequence

MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR

Homology

[Close]

BLAST of Cmc06g0175621 vs. NCBI nr
Match: XP_008448993.1 (PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo] >XP_016900649.1 PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP
Sbjct: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120
           IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG
Sbjct: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120

Query: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR
Sbjct: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 174

[Close]

BLAST of Cmc06g0175621 vs. NCBI nr
Match: XP_038905031.1 (protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_038905032.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_038905033.1 protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 158/174 (90.80%), Postives = 164/174 (94.25%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTT+S  MLPLLPPVGQH GRMKAKDL LRRYSSQ QT NGRRQS+FAKAGPVFLKP
Sbjct: 1   MEMLTTSSGAMLPLLPPVGQHRGRMKAKDLSLRRYSSQLQTLNGRRQSVFAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120
           IPSTG KGG LCSSR+N+ F+C AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG
Sbjct: 61  IPSTGMKGGDLCSSRRNNAFMCFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120

Query: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQ+DRRR
Sbjct: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQNDRRR 174

[Close]

BLAST of Cmc06g0175621 vs. NCBI nr
Match: XP_004148272.1 (protein FERTILITY RESTORER RF2, mitochondrial [Cucumis sativus] >KGN55988.1 hypothetical protein Csa_010321 [Cucumis sativus])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 154/174 (88.51%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTTNS  MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKP
Sbjct: 1   MEMLTTNSGAMLPLLPPVGQHWGRMKANNLPLRWYSSQHQTPNSRRLSMVAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120
           IPST TKGG+LCSSRKN+ FIC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG
Sbjct: 61  IPSTRTKGGVLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120

Query: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLG LKDKE +G Y++DRRR
Sbjct: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEEDGSYENDRRR 174

[Close]

BLAST of Cmc06g0175621 vs. NCBI nr
Match: XP_023553392.1 (uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553393.1 uncharacterized protein LOC111810820 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023553394.1 uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.9 bits (764), Expect = 2.8e-77
Identity = 154/175 (88.00%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTT+S  ML LLPPVGQHWG+MKAKD  LRR S Q QTPNGRRQS+ AKAGPVFLKP
Sbjct: 1   MEMLTTSSGAMLTLLPPVGQHWGKMKAKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120
           IPSTGTKGG+L S+RK N+ FIC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD
Sbjct: 61  IPSTGTKGGVLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120

Query: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y+DDRRR
Sbjct: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGAYEDDRRR 175

[Close]

BLAST of Cmc06g0175621 vs. NCBI nr
Match: XP_038905028.1 (uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_038905029.1 uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_038905030.1 uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida])

HSP 1 Score: 298.1 bits (762), Expect = 4.9e-77
Identity = 157/191 (82.20%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPP-----------------VGQHWGRMKAKDLPLRRYSSQHQTPN 60
           MEMLTT+S  MLPLLPP                 +GQH GRMKAKDL LRRYSSQ QT N
Sbjct: 1   MEMLTTSSGAMLPLLPPGHERKAGKCSFPTQKGTLGQHRGRMKAKDLSLRRYSSQLQTLN 60

Query: 61  GRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAP 120
           GRRQS+FAKAGPVFLKPIPSTG KGG LCSSR+N+ F+C AALNARCAAEQTQTVTREAP
Sbjct: 61  GRRQSVFAKAGPVFLKPIPSTGMKGGDLCSSRRNNAFMCFAALNARCAAEQTQTVTREAP 120

Query: 121 TITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKE 175
           TITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKE
Sbjct: 121 TITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKE 180

[Close]

BLAST of Cmc06g0175621 vs. ExPASy Swiss-Prot
Match: F1SZ44 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.8e-08
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 72  CSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 131
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKTQGPKLDDGSGGFPPF 93

Query: 132 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 164
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Cmc06g0175621 vs. ExPASy Swiss-Prot
Match: F1SZ42 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 72  CSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 131
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPF 93

Query: 132 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 164
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Cmc06g0175621 vs. ExPASy Swiss-Prot
Match: F1SZ41 (Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=RF2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-08
Identity = 44/98 (44.90%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 72  CSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVL----PGKEKSPQLDDGDSGFPPR 131
           C S K          + RC A QTQ+  R++ T TV      GK + P+LDDG  GFPP 
Sbjct: 34  CISFKREVSAKAVLRSVRCNATQTQSAQRKSSTATVKRSDPKGKIQGPKLDDGSGGFPPF 93

Query: 132 DDGDGGGGGGGGGG--NWSGGFFFFGFLAFLGFLKDKE 164
             G GGGGGGGGGG  N+ GGF  F  +  L +LK+ E
Sbjct: 94  RFGKGGGGGGGGGGGSNYFGGFLLFTCVLLLDYLKEFE 131

[Close]

BLAST of Cmc06g0175621 vs. ExPASy Swiss-Prot
Match: Q0E3V2 (Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=YL1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 8.5e-08
Identity = 39/88 (44.32%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 82  CLAALNARCAAEQTQTVTRE------APTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGG 141
           C A++   C A QTQT  R+      +P    +  K +SP+LDDG +GFPP   G GGGG
Sbjct: 58  CEASMRITCCANQTQTARRKSFSGPTSPPSGSVKEKVRSPKLDDGGTGFPPFRFGGGGGG 117

Query: 142 GGGGGGNWSGGFFFFGFLAFLGFLKDKE 164
           GGGGG N +GGF  F  +  L +L++ E
Sbjct: 118 GGGGGSNSAGGFILFVIVLLLDYLREFE 145

[Close]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL
Match: A0A1S4DXD8 (uncharacterized protein LOC103490999 OS=Cucumis melo OX=3656 GN=LOC103490999 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.8e-92
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP
Sbjct: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120
           IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG
Sbjct: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120

Query: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR
Sbjct: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 174

[Close]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL
Match: A0A0A0L2P2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G044530 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 154/174 (88.51%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTTNS  MLPLLPPVGQHWGRMKA +LPLR YSSQHQTPN RR S+ AKAGPVFLKP
Sbjct: 1   MEMLTTNSGAMLPLLPPVGQHWGRMKANNLPLRWYSSQHQTPNSRRLSMVAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120
           IPST TKGG+LCSSRKN+ FIC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG
Sbjct: 61  IPSTRTKGGVLCSSRKNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDG 120

Query: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLG LKDKE +G Y++DRRR
Sbjct: 121 DSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEEDGSYENDRRR 174

[Close]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL
Match: A0A6J1HQC3 (uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 154/175 (88.00%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTTNS  ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKP
Sbjct: 1   MEMLTTNSGAMLTLLPPVGQHWGKMKVKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120
           IPSTGTKGG L S+RK N+ FIC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD
Sbjct: 61  IPSTGTKGGFLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120

Query: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y+DDRRR
Sbjct: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGSYEDDRRR 175

[Close]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL
Match: A0A6J1F258 (uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC111438781 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 4.0e-77
Identity = 153/175 (87.43%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MEMLTTNSAVMLPLLPPVGQHWGRMKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKP 60
           MEMLTT+S  ML LLPPVGQHWG+MK KD  LRR S Q QTPNGRRQS+ AKAGPVFLKP
Sbjct: 1   MEMLTTSSGAMLTLLPPVGQHWGKMKGKDFLLRRDSVQLQTPNGRRQSVIAKAGPVFLKP 60

Query: 61  IPSTGTKGGILCSSRK-NSTFICLAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120
           IPSTGTKGG+L S+RK N+ FIC AALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD
Sbjct: 61  IPSTGTKGGVLYSTRKNNNAFICFAALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDD 120

Query: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEG Y+DDRRR
Sbjct: 121 GDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGAYEDDRRR 175

[Close]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL
Match: A0A5D3D747 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00210 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.2e-77
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 25  MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLA 84
           MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLA
Sbjct: 1   MKAKDLPLRRYSSQHQTPNGRRQSLFAKAGPVFLKPIPSTGTKGGILCSSRKNSTFICLA 60

Query: 85  ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 144
           ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS
Sbjct: 61  ALNARCAAEQTQTVTREAPTITVLPGKEKSPQLDDGDSGFPPRDDGDGGGGGGGGGGNWS 120

Query: 145 GGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
           GGFFFFGFLAFLGFLKDKESEGPYQDDRRR
Sbjct: 121 GGFFFFGFLAFLGFLKDKESEGPYQDDRRR 150

[Close]

BLAST of Cmc06g0175621 vs. TAIR 10
Match: AT1G56200.1 (embryo defective 1303 )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 58  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 117
           + P+ + G   G+   SR+ S  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 39  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 98

Query: 118 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 99  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 154

[Close]

BLAST of Cmc06g0175621 vs. TAIR 10
Match: AT1G56200.2 (embryo defective 1303 )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 0


Query: 58  LKPIPSTGTKGGILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSP 117
           + P+ + G   G+   SR+ S  IC +A+NA+C+  QTQTVTRE+PTIT  P   KEKSP
Sbjct: 36  VSPLSAVGLSSGL--GSRRKSLLICHSAINAKCSEGQTQTVTRESPTITQAPVHSKEKSP 95

Query: 118 QLDDGDSGFPPRDDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESEGPYQDDRRR 175
            LDDG  GFPPRDDGD GGGGGGGGGNWSGGFFFFGFLAFLG LKDKE E  Y+  RRR
Sbjct: 96  SLDDGGDGFPPRDDGD-GGGGGGGGGNWSGGFFFFGFLAFLGLLKDKEGEEDYRGSRRR 151

[Close]

BLAST of Cmc06g0175621 vs. TAIR 10
Match: AT1G30475.1 (BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 148 Blast hits to 148 proteins in 34 species: Archae - 0; Bacteria - 14; Metazoa - 63; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 70  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 129
           ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 90  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 149

Query: 130 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 166
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 150 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 186

[Close]

BLAST of Cmc06g0175621 vs. TAIR 10
Match: AT1G30475.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 70  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 129
           ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 61  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120

Query: 130 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 166
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 121 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 157

[Close]

BLAST of Cmc06g0175621 vs. TAIR 10
Match: AT1G30475.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G56200.1); Has 142 Blast hits to 142 proteins in 33 species: Archae - 0; Bacteria - 14; Metazoa - 57; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-25
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 70  ILCSSRKNSTFICLAALNARCAAEQTQTVTREAPTITVLP--GKEKSPQLDDGDSGFPPR 129
           ++ S  K   F C +ALN++C+  QTQTVTR++PTIT  P  GK KSP+LDDG +GFPPR
Sbjct: 61  VVVSKNKRPVFACNSALNSKCSQGQTQTVTRQSPTITQAPTHGKVKSPKLDDGGNGFPPR 120

Query: 130 DDGDGGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESE 166
           DDG GGGGGGGGGG+ SGGFF FGFL F+G+LKD E E
Sbjct: 121 DDG-GGGGGGGGGGSSSGGFFLFGFLLFMGYLKDLEGE 157

The following BLAST results are available for this feature:

BLAST of Cmc06g0175621 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448993.1	1.2e-91	100.00	PREDICTED: uncharacterized protein LOC103490999 [Cucumis melo] >XP_016900649.1 P...	[more]
XP_038905031.1	1.2e-80	90.80	protein YELLOW LEAF 1, choloroplastic-like isoform X2 [Benincasa hispida] >XP_03...	[more]
XP_004148272.1	2.7e-80	88.51	protein FERTILITY RESTORER RF2, mitochondrial [Cucumis sativus] >KGN55988.1 hypo...	[more]
XP_023553392.1	2.8e-77	88.00	uncharacterized protein LOC111810820 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_038905028.1	4.9e-77	82.20	uncharacterized protein LOC120091196 isoform X1 [Benincasa hispida] >XP_03890502...	[more]

BLAST of Cmc06g0175621 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F1SZ44	3.8e-08	44.90	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX...	[more]
F1SZ42	6.5e-08	44.90	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. japonica OX...	[more]
F1SZ41	6.5e-08	44.90	Protein FERTILITY RESTORER RF2, mitochondrial OS=Oryza sativa subsp. indica OX=3...	[more]
Q0E3V2	8.5e-08	44.32	Protein YELLOW LEAF 1, choloroplastic OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of Cmc06g0175621 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXD8	5.8e-92	100.00	uncharacterized protein LOC103490999 OS=Cucumis melo OX=3656 GN=LOC103490999 PE=...	[more]
A0A0A0L2P2	1.3e-80	88.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G044530 PE=4 SV=1	[more]
A0A6J1HQC3	2.3e-77	88.00	uncharacterized protein LOC111465127 OS=Cucurbita maxima OX=3661 GN=LOC111465127...	[more]
A0A6J1F258	4.0e-77	87.43	uncharacterized protein LOC111438781 OS=Cucurbita moschata OX=3662 GN=LOC1114387...	[more]
A0A5D3D747	5.2e-77	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cmc06g0175621 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56200.1	1.2e-33	65.55	embryo defective 1303	[more]
AT1G56200.2	1.2e-33	65.55	embryo defective 1303	[more]
AT1G30475.1	2.7e-25	64.29	BEST Arabidopsis thaliana protein match is: embryo defective 1303 (TAIR:AT1G5620...	[more]
AT1G30475.2	2.7e-25	64.29	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G30475.3	2.7e-25	64.29	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..140
None	No IPR available	PANTHER	PTHR34938:SF1	PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL	coord: 50..173
IPR040299	Protein FERTILITY RESTORER RF2-like	PANTHER	PTHR34938	PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL	coord: 50..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0175621.1	Cmc06g0175621.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane