Cmc06g0174651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0174651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Protein ALP1-like
Location	CMiso1.1chr06: 31656622 .. 31657305 (-)
RNA-Seq Expression	Cmc06g0174651
Synteny	Cmc06g0174651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTGTACCAATGAAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGTAATGCTTTAATGTTTTGATTTATTTTAGAAATATAATGTTTTGAAATATATTTGTGTTTTTCATTATCCTTTAGGATTGTATTGGTGCTATTGATGGCACTCATGTTGCTGCAAGTATTCCCCAAAATGAACAAATACCGTTTCGTGGAAGAAAAACTAACACAACATGGAATATAATGTGTGTTTATTCATTTGATATGTTAGTCATATATGTCATGTTTGGTTGGGAAGGATTAGCCAATGATTCTCGTATACTTCTAGAATGTATCAAGAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGGTAAATAATTATGTGTTTTTCAAAACTTTAATTCCATATTTGATTTGATGATAATTTTGTATTTGCTTTATTATATGCAGATCAATACTATCTTATCGATTTAGGATATTCAAATATGCCAGGATTGTTAGCACCATTTCGAGGTCAAGGATATCATTTACGAGATTTTAGAGAAAGGGGATATCGCCCTCGAGGTAGAGAAGAAGTGTTTAATTATCGACATTCTTCACTGCGAAATGTCATTGAATGTTGTTTTGGTATGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTACCCGATCAAGACTTAA

mRNA sequence

ATGGACATTGTACCAATGAAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGATTGTATTGGTGCTATTGATGGCACTCATGTTGCTGCAAGTATTCCCCAAAATGAACAAATACCGTTTCGTGGAAGAAAAACTAACACAACATGGAATATAATGTGTGTTTATTCATTTGATATGTTAGTCATATATGTCATGTTTGGTTGGGAAGGATTAGCCAATGATTCTCGTATACTTCTAGAATGTATCAAGAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGATCAATACTATCTTATCGATTTAGGATATTCAAATATGCCAGGATTGTTAGCACCATTTCGAGGTCAAGGATATCATTTACGAGATTTTAGAGAAAGGGGATATCGCCCTCGAGGTAGAGAAGAAGTGTTTAATTATCGACATTCTTCACTGCGAAATGTCATTGAATGTTGTTTTGGTATGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTACCCGATCAAGACTTAA

Coding sequence (CDS)

ATGGACATTGTACCAATGAAGATCGTATCAAATTCAAAATATTACCCTTTCTTTAAGGATTGTATTGGTGCTATTGATGGCACTCATGTTGCTGCAAGTATTCCCCAAAATGAACAAATACCGTTTCGTGGAAGAAAAACTAACACAACATGGAATATAATGTGTGTTTATTCATTTGATATGTTAGTCATATATGTCATGTTTGGTTGGGAAGGATTAGCCAATGATTCTCGTATACTTCTAGAATGTATCAAGAATCCCGAGAATAAATTTCCTATGCCTAAGAGAGATCAATACTATCTTATCGATTTAGGATATTCAAATATGCCAGGATTGTTAGCACCATTTCGAGGTCAAGGATATCATTTACGAGATTTTAGAGAAAGGGGATATCGCCCTCGAGGTAGAGAAGAAGTGTTTAATTATCGACATTCTTCACTGCGAAATGTCATTGAATGTTGTTTTGGTATGCTGAAGGCTCGATTTCCTATTCTTAAGCAAATGCCTCCTTACCCGATCAAGACTTAA

Protein sequence

MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFDMLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQGYHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT

Homology

[Close]

BLAST of Cmc06g0174651 vs. NCBI nr
Match: KAA0068176.1 (putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD V M+IVSNSKYYP FKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 1   MDTVAMEIVSNSKYYPLFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL+D GYSNMPG LAPFRGQ 
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 175

[Close]

BLAST of Cmc06g0174651 vs. NCBI nr
Match: TYK21096.1 (protein ALP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 337.0 bits (863), Expect = 9.5e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           M+ V  KIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 1   MNTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL+D GYSNMPG LAPFRGQ 
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 175

[Close]

BLAST of Cmc06g0174651 vs. NCBI nr
Match: TYK06269.1 (protein ALP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 337.0 bits (863), Expect = 9.5e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD V  KIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 55  MDTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 114

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL++ GYSNMPG LAPFRGQ 
Sbjct: 115 MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVNSGYSNMPGFLAPFRGQR 174

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 175 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 229

[Close]

BLAST of Cmc06g0174651 vs. NCBI nr
Match: XP_016901856.1 (PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 6.8e-79
Identity = 144/175 (82.29%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD +PM+I+SNSKYYPFFKD IGAID THV ASI QNEQI FRGRKTNTTWNIMCV SFD
Sbjct: 1   MDTIPMEIISNSKYYPFFKDFIGAIDDTHVVASILQNEQILFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG  ND RIL ECI+NPENKFPMPKRDQYYL+D GYSNMP  LAPF+G+ 
Sbjct: 61  MLFTYVMSGWEGSTNDFRILEECIENPENKFPMPKRDQYYLVDSGYSNMPRFLAPFQGRR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER + PRGR EVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHCPRGR-EVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 174

[Close]

BLAST of Cmc06g0174651 vs. NCBI nr
Match: KAA0065774.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYJ96514.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 7.3e-65
Identity = 128/175 (73.14%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAA                            
Sbjct: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAAR--------------------------- 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
                       LANDS ILLECIKNPENKF MPKRDQYYL++LGYSNMPGLLAPFRGQ 
Sbjct: 61  ------------LANDSCILLECIKNPENKFSMPKRDQYYLVNLGYSNMPGLLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRERG+RPRGREEVFNYRHSSLRNVIECCFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERGHRPRGREEVFNYRHSSLRNVIECCFGILKARFPILKQMPPYPIKT 136

[Close]

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL
Match: A0A5A7VNL5 (Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001450 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.5e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD V M+IVSNSKYYP FKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 1   MDTVAMEIVSNSKYYPLFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL+D GYSNMPG LAPFRGQ 
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 175

[Close]

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL
Match: A0A5D3DC11 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00620 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           M+ V  KIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 1   MNTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL+D GYSNMPG LAPFRGQ 
Sbjct: 61  MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVDSGYSNMPGFLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 175

[Close]

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL
Match: A0A5D3C7F6 (Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00500 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.6e-89
Identity = 157/175 (89.71%), Postives = 161/175 (92.00%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD V  KIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCV SFD
Sbjct: 55  MDTVATKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVCSFD 114

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG ANDSRIL ECIKNPENKFPMPKRDQYYL++ GYSNMPG LAPFRGQ 
Sbjct: 115 MLFTYVMSGWEGSANDSRILQECIKNPENKFPMPKRDQYYLVNSGYSNMPGFLAPFRGQR 174

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER +RPRGREEVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 175 YHLRDFRERRHRPRGREEVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 229

[Close]

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL
Match: A0A1S4E0U9 (uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.3e-79
Identity = 144/175 (82.29%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MD +PM+I+SNSKYYPFFKD IGAID THV ASI QNEQI FRGRKTNTTWNIMCV SFD
Sbjct: 1   MDTIPMEIISNSKYYPFFKDFIGAIDDTHVVASILQNEQILFRGRKTNTTWNIMCVCSFD 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
           ML  YVM GWEG  ND RIL ECI+NPENKFPMPKRDQYYL+D GYSNMP  LAPF+G+ 
Sbjct: 61  MLFTYVMSGWEGSTNDFRILEECIENPENKFPMPKRDQYYLVDSGYSNMPRFLAPFQGRR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRER + PRGR EVFNYRHSSLRNVIE CFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERRHCPRGR-EVFNYRHSSLRNVIERCFGVLKARFPILKQMPPYPIKT 174

[Close]

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL
Match: A0A5A7VEQ3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001630 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.5e-65
Identity = 128/175 (73.14%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFD 60
           MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAA                            
Sbjct: 1   MDIVPMKIVSNSKYYPFFKDCIGAIDGTHVAAR--------------------------- 60

Query: 61  MLVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQG 120
                       LANDS ILLECIKNPENKF MPKRDQYYL++LGYSNMPGLLAPFRGQ 
Sbjct: 61  ------------LANDSCILLECIKNPENKFSMPKRDQYYLVNLGYSNMPGLLAPFRGQR 120

Query: 121 YHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
           YHLRDFRERG+RPRGREEVFNYRHSSLRNVIECCFG+LKARFPILKQMPPYPIKT
Sbjct: 121 YHLRDFRERGHRPRGREEVFNYRHSSLRNVIECCFGILKARFPILKQMPPYPIKT 136

[Close]

BLAST of Cmc06g0174651 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.7e-30
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 16  PFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFDMLVIYVMFGWEGLAN 75
           P+FKDC+G +D  H+   +  +EQ PFR      T N++   SFD+   YV+ GWEG A+
Sbjct: 138 PYFKDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSAS 197

Query: 76  DSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQGYHLRDFRERGYRPRG 135
           D ++L   +    NK  +P + +YY++D  Y N+PG +AP+ G   + R+          
Sbjct: 198 DQQVLNAALTR-RNKLQVP-QGKYYIVDNKYPNLPGFIAPYHGVSTNSRE---------E 257

Query: 136 REEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIKT 176
            +E+FN RH  L   I   FG LK RFPIL   PPYP++T
Sbjct: 258 AKEMFNERHKLLHRAIHRTFGALKERFPILLSAPPYPLQT 286

[Close]

BLAST of Cmc06g0174651 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 4.9e-27
Identity = 59/161 (36.65%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 4   VPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFDMLV 63
           +P ++  + +Y+P+F   +GA+DGTHV   +  + Q  +  R  N + NIM +    ML 
Sbjct: 159 IPERLQVDQRYWPYFSGFVGAMDGTHVCVKVKPDLQGMYWNRHDNASLNIMAICDLKMLF 218

Query: 64  IYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQ---- 123
            Y+  G  G   D+ + L+  +  +++FP+P  ++YYL+D GY N  GLLAP+R      
Sbjct: 219 TYIWNGAPGSCYDTAV-LQIAQQSDSEFPLPPSEKYYLVDSGYPNKQGLLAPYRSSRNRV 278

Query: 124 -GYHLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLK 160
             YH+  F   G RPR + E+FN  H+SLR+VIE  F + K
Sbjct: 279 VRYHMSQF-YYGPRPRNKHELFNQCHTSLRSVIERTFRIWK 317

[Close]

BLAST of Cmc06g0174651 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 4.8e-22
Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 62  LVIYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQGY 121
           + IYV+ GWEG A+DSR+L + ++            ++YL+D G++N    LAPFRG  Y
Sbjct: 24  IFIYVLSGWEGSAHDSRVLSDALR------------KFYLVDCGFANRLNFLAPFRGVRY 83

Query: 122 HLRDFRERGYRPRGREEVFNYRHSSLRNVIECCFGMLKARFPILKQMPPYPIK 175
           HL++F  +   P    E+FN RH SLRNVIE  FG+ K+RF I K  PP+  K
Sbjct: 84  HLQEFAGQRRDPETPHELFNLRHVSLRNVIERIFGIFKSRFAIFKSAPPFSYK 124

[Close]

BLAST of Cmc06g0174651 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 5.3e-21
Identity = 39/95 (41.05%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 4   VPMKIVSNSKYYPFFKDCIGAIDGTHVAASIPQNEQIPFRGRKTNTTWNIMCVYSFDMLV 63
           VP KI  +++ YP+FKDC+GAID TH+ A + Q +   FR RK + + N++   +FD+  
Sbjct: 8   VPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEF 67

Query: 64  IYVMFGWEGLANDSRILLECIKNPENKFPMPKRDQ 99
           +YV+ GWEG A+DS++L + +    N+ P+P+ D+
Sbjct: 68  MYVLSGWEGSAHDSKVLNDALTRNSNRLPVPEEDE 102

[Close]

BLAST of Cmc06g0174651 vs. TAIR 10
Match: AT4G10890.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439 (InterPro:IPR018838); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 74  ANDSRILLECIKNPENKFPMPKRDQYYLIDLGYSNMPGLLAPFRGQGYHLRDFRERGYRP 133
           ++D+++L  C +N E+  P P   +YYL++  Y    G L P R   YHL  F  RG  P
Sbjct: 71  SHDTKVLKYCARN-ESFSPHPSNRKYYLVNSVYPTTTGYLGPHRRILYHLGQF-GRGGPP 130

Query: 134 RGREEVFNYRHSSLRNVIECCFGMLKARFPIL 166
              +E+FN +H  LR+VI+  FG+ KA++ IL
Sbjct: 131 VTVQELFNRKHLDLRSVIDRTFGVWKAKWRIL 160

The following BLAST results are available for this feature:

BLAST of Cmc06g0174651 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0068176.1	7.3e-89	89.71	putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]	[more]
TYK21096.1	9.5e-89	89.71	protein ALP1-like [Cucumis melo var. makuwa]	[more]
TYK06269.1	9.5e-89	89.71	protein ALP1-like [Cucumis melo var. makuwa]	[more]
XP_016901856.1	6.8e-79	82.29	PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo]	[more]
KAA0065774.1	7.3e-65	73.14	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYJ96514.1 putative nucleas...	[more]

BLAST of Cmc06g0174651 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc06g0174651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VNL5	3.5e-89	89.71	Putative nuclease HARBI1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3DC11	4.6e-89	89.71	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00...	[more]
A0A5D3C7F6	4.6e-89	89.71	Protein ALP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00...	[more]
A0A1S4E0U9	3.3e-79	82.29	uncharacterized protein LOC103496041 OS=Cucumis melo OX=3656 GN=LOC103496041 PE=...	[more]
A0A5A7VEQ3	3.5e-65	73.14	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Cmc06g0174651 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	3.7e-30	38.75	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	4.9e-27	36.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G35695.1	4.8e-22	44.25	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT5G28950.1	5.3e-21	41.05	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G10890.1	1.4e-10	39.13	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2439...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027806	Harbinger transposase-derived nuclease domain	PFAM	PF13359	DDE_Tnp_4	coord: 25..167 e-value: 3.4E-17 score: 62.6
None	No IPR available	PANTHER	PTHR22930:SF212	NUCLEASE HARBI1 ISOFORM X1-RELATED	coord: 10..168
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 10..168

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0174651.1	Cmc06g0174651.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0046872	metal ion binding