Cmc06g0174611 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0174611
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 31628204 .. 31629849 (+)
RNA-Seq Expression	Cmc06g0174611
Synteny	Cmc06g0174611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATGCATTGATTATAGGGAGTTGAATAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTTTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGGATTCCTAGATACTTTTGTGATCGTATTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGCAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTCGTTTGGAGTAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGACGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACCTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCGTTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATACCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAATGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGATTTACAGTGA

mRNA sequence

ATGCGTCTATGCATTGATTATAGGGAGTTGAATAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTTTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTCGTTTGGAGTAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGACGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACCTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCGTTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATACCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAATGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGATTTACAGTGA

Coding sequence (CDS)

ATGCGTCTATGCATTGATTATAGGGAGTTGAATAAGGTAACCGTGAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTTTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTCACTCAGTTGACCAGGAAGGGAGCTCCTTTCGTTTGGAGTAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCCGACGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGGTTGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCCTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGGAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCGAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCGGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGTGCAGTTACTATGCAGTTAGCCCAGTTGACAGTACAGCCGACCTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCGTTATCCTCTGATGGTGGACTTTTGTTCGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATACCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAATGGGAGAACGTGTCCATGGATTTCATTACAGGGCTACCGAGAACTCTGAGGGATTTACAGTGA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRDLQ

Homology

[Close]

BLAST of Cmc06g0174611 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 958.4 bits (2476), Expect = 2.4e-275
Identity = 484/522 (92.72%), Postives = 484/522 (92.72%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSK DLRSGYHQLRIKDEDVPKTA
Sbjct: 592  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTA 651

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 652  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEH 711

Query: 121  ---VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 180
               VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 181  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 240
            PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 241  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 300
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 361  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 420
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK L
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 481  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 490
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1113

[Close]

BLAST of Cmc06g0174611 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 952.2 bits (2460), Expect = 1.8e-273
Identity = 485/545 (88.99%), Postives = 486/545 (89.17%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSD SKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            DLKRVYWWRNMKREVAEFVS+ LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

[Close]

BLAST of Cmc06g0174611 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 951.0 bits (2457), Expect = 3.9e-273
Identity = 484/545 (88.81%), Postives = 487/545 (89.36%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            D+KRVYWWRNMKREVAEFVS+ LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

[Close]

BLAST of Cmc06g0174611 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 951.0 bits (2457), Expect = 3.9e-273
Identity = 485/545 (88.99%), Postives = 485/545 (88.99%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            DLKRVYWWRNMKREVAEFVSK LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

[Close]

BLAST of Cmc06g0174611 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 948.3 bits (2450), Expect = 2.5e-272
Identity = 480/522 (91.95%), Postives = 482/522 (92.34%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 509  MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTA 568

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 569  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 628

Query: 121  ---VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 180
               VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLAGYYRRFVENFS IAT
Sbjct: 629  LRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIAT 688

Query: 181  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 240
            PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 689  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 748

Query: 241  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 300
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 749  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 808

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA
Sbjct: 809  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 868

Query: 361  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 420
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
Sbjct: 869  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 928

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+ L
Sbjct: 929  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCL 988

Query: 481  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 490
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+
Sbjct: 989  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLK 1030

[Close]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------------------- 120
           FR   G +E++VM +G++ APA F   +N                               
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 -------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                    +V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
           AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
             +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882 EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481 SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKW 488
            +HPG   +   + R + W+ +++++ E+V     CQ  K+   KP G LQP+   E  W
Sbjct: 942 LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 998

[Close]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------------------- 120
           FR   G +E++VM +G++ APA F   +N                               
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 -------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                    +V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
           AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
             +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882 EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481 SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKW 488
            +HPG   +   + R + W+ +++++ E+V     CQ  K+   KP G LQP+   E  W
Sbjct: 942 LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 998

[Close]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------------------- 120
           FR   G +E++VM +G++ APA F   +N                               
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 -------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                    +V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
           AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
             +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882 EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481 SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKW 488
            +HPG   +   + R + W+ +++++ E+V     CQ  K+   KP G LQP+   E  W
Sbjct: 942 LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 998

[Close]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------------------- 120
           FR   G +E++VM +G++ APA F   +N                               
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 -------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                    +V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
           AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
             +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882 EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481 SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKW 488
            +HPG   +   + R + W+ +++++ E+V     CQ  K+   KP G LQP+   E  W
Sbjct: 942 LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 998

[Close]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.8e-69
Identity = 163/554 (29.42%), Postives = 268/554 (48.38%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
           +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++  D  K A
Sbjct: 462 LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------------------- 120
           FR   G +E++VM +G++ APA F   +N                               
Sbjct: 522 FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121 -------------------------RVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                    +V F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582 VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
           +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PVL  
Sbjct: 642 LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241 PDGSGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
            D S   ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702 FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301 ALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGK 360
           +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762 SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361 ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
           AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++ 
Sbjct: 822 ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421 AQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
             +ND  L+    L    + VE ++    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882 EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481 SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKW 488
            +HPG   +   + R + W+ +++++ E+V     CQ  K+   KP G LQP+   E  W
Sbjct: 942 LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 998

[Close]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 958.4 bits (2476), Expect = 1.2e-275
Identity = 484/522 (92.72%), Postives = 484/522 (92.72%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGA VFSK DLRSGYHQLRIKDEDVPKTA
Sbjct: 592  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGAIVFSKFDLRSGYHQLRIKDEDVPKTA 651

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 652  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFRKFLDTFVIVFIDDILIYSKTEAEHEEH 711

Query: 121  ---VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 180
               VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 181  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 240
            PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 241  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 300
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 361  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 420
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSK L
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 481  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 490
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 1113

[Close]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 952.2 bits (2460), Expect = 8.5e-274
Identity = 485/545 (88.99%), Postives = 486/545 (89.17%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSD SKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            DLKRVYWWRNMKREVAEFVS+ LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

[Close]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 1.9e-273
Identity = 485/545 (88.99%), Postives = 485/545 (88.99%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            DLKRVYWWRNMKREVAEFVSK LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

[Close]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 1.9e-273
Identity = 484/545 (88.81%), Postives = 487/545 (89.36%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  --------------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
                                      VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 360
            RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSKYLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 490
            D+KRVYWWRNMKREVAEFVS+ LVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

[Close]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.2e-272
Identity = 480/522 (91.95%), Postives = 482/522 (92.34%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 60
            MRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSGYHQLRIKD DVPKTA
Sbjct: 509  MRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSGYHQLRIKDGDVPKTA 568

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR------------------------------ 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNR                              
Sbjct: 569  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 628

Query: 121  ---VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 180
               VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLAGYYRRFVENFS IAT
Sbjct: 629  LRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLAGYYRRFVENFSHIAT 688

Query: 181  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 240
            PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 689  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 748

Query: 241  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 300
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 749  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 808

Query: 301  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 360
            QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA
Sbjct: 809  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 868

Query: 361  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 420
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL
Sbjct: 869  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 928

Query: 421  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKYL 480
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEF S+ L
Sbjct: 929  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFFSRCL 988

Query: 481  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLR 490
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTL+
Sbjct: 989  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLK 1030

[Close]

BLAST of Cmc06g0174611 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-21
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 90  RVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 149
           ++++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 150 PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 193
           PLT+L +K +   W++    +F+ LK  + T PVL +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc06g0174611 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0051368.1	2.4e-275	92.72	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	1.8e-273	88.99	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	3.9e-273	88.81	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	3.9e-273	88.99	pol protein [Cucumis melo var. makuwa]	[more]
KAA0036553.1	2.5e-272	91.95	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0174611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	3.8e-69	29.42	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.8e-69	29.42	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.8e-69	29.42	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.8e-69	29.42	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	3.8e-69	29.42	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0174611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U7V9	1.2e-275	92.72	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7V1N3	8.5e-274	88.99	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5D3BPI1	1.9e-273	88.99	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U330	1.9e-273	88.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7T0Y9	1.2e-272	91.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]

BLAST of Cmc06g0174611 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.8e-21	45.71	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 398..454 e-value: 8.8E-15 score: 54.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 194..316 e-value: 4.1E-5 score: 25.4
None	No IPR available	GENE3D	1.10.340.70		coord: 363..453 e-value: 1.1E-16 score: 62.8
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 3.4E-40 score: 139.6
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 96..306
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 96..306
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..106 e-value: 1.01803E-45 score: 155.831
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 192..307 e-value: 1.82146E-60 score: 192.322
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 189..285 e-value: 1.5E-34 score: 118.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 108..193 e-value: 4.7E-31 score: 108.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..94 e-value: 3.4E-40 score: 139.6
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..92 e-value: 1.1E-8 score: 34.8
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0174611.1	Cmc06g0174611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding