Cmc06g0174401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0174401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr06: 31385184 .. 31385627 (+)
RNA-Seq Expression	Cmc06g0174401
Synteny	Cmc06g0174401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACATTTCCTACTCACAAGTGGTAGGCAGTACAATGTACCTAATGATTTCTACTAGGTCTGATCTATCTTATTCATCTAGTTTAATAAGCAGGTACATGGCTAACCCAAGCAAAAGGCATTGGGAAGCAGCCAAATGGGTACTTAGGTACCTAAAGGGATTTCTGAATGCTCAATTGATGTACAAAATATGTCTTAAAGAATTGTTTGAGCTTTATGGTTTTGTAGACTTTGACTACGCAGGGGATTTGGACAAGAGAAGGTCACTGACAGGATACTATTTCCTAATTGGAGGCAACCTATTAACTTGGAAAGCTTTACTACAACCTGTGGTGACCCTATCATCTATTAAATTCTTGAAGGTGTTAGCGCTCGAATTCCTAGAATTTCTTACAAGTTTAATTGAAGAGCGATCCTTAAAGTTCTTGGGTAAGTGGTAG

mRNA sequence

ATGGCAAACATTTCCTACTCACAAGTGGTAGGCAGTACAATGTACCTAATGATTTCTACTAGGTCTGATCTATCTTATTCATCTAGTTTAATAAGCAGGTACATGGCTAACCCAAGCAAAAGGCATTGGGAAGCAGCCAAATGGGTACTTAGGTACCTAAAGGGATTTCTGAATGCTCAATTGATGTACAAAATATGTCTTAAAGAATTGTTTGAGCTTTATGGTTTTGTAGACTTTGACTACGCAGGGGATTTGGACAAGAGAAGGTCACTGACAGGATACTATTTCCTAATTGGAGGCAACCTATTAACTTGGAAAGCTTTACTACAACCTGTGGTGACCCTATCATCTATTAAATTCTTGAAGGTGTTAGCGCTCGAATTCCTAGAATTTCTTACAAGTTTAATTGAAGAGCGATCCTTAAAGTTCTTGGGTAAGTGGTAG

Coding sequence (CDS)

ATGGCAAACATTTCCTACTCACAAGTGGTAGGCAGTACAATGTACCTAATGATTTCTACTAGGTCTGATCTATCTTATTCATCTAGTTTAATAAGCAGGTACATGGCTAACCCAAGCAAAAGGCATTGGGAAGCAGCCAAATGGGTACTTAGGTACCTAAAGGGATTTCTGAATGCTCAATTGATGTACAAAATATGTCTTAAAGAATTGTTTGAGCTTTATGGTTTTGTAGACTTTGACTACGCAGGGGATTTGGACAAGAGAAGGTCACTGACAGGATACTATTTCCTAATTGGAGGCAACCTATTAACTTGGAAAGCTTTACTACAACCTGTGGTGACCCTATCATCTATTAAATTCTTGAAGGTGTTAGCGCTCGAATTCCTAGAATTTCTTACAAGTTTAATTGAAGAGCGATCCTTAAAGTTCTTGGGTAAGTGGTAG

Protein sequence

MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKFLKVLALEFLEFLTSLIEERSLKFLGKW

Homology

[Close]

BLAST of Cmc06g0174401 vs. NCBI nr
Match: XP_038877926.1 (secreted RxLR effector protein 161-like [Benincasa hispida])

HSP 1 Score: 157.5 bits (397), Expect = 8.6e-35
Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           MA I YSQ VGS MYLMISTR DLSYS+SL+SRYM+NP K HW+A KW+LRYL  F N++
Sbjct: 97  MAIIPYSQAVGSLMYLMISTRPDLSYSTSLVSRYMSNPGKIHWKATKWILRYLIWFKNSK 156

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
           L+Y+  +K   ELYG++D DYAGDLDKRRSLT Y FL G NL++WKA LQP+V LS+ + 
Sbjct: 157 LVYQRSIKPNLELYGYMDADYAGDLDKRRSLTSYLFLFGPNLISWKASLQPIVALSTTE- 216

Query: 121 LKVLALEFLEFLTSLIEERSLKFLGK 147
                 E++  + ++ E   LK L K
Sbjct: 217 -----AEYMTLIEAIKEALWLKGLLK 236

[Close]

BLAST of Cmc06g0174401 vs. NCBI nr
Match: XP_031737558.1 (secreted RxLR effector protein 161-like [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 9.0e-32
Identity = 73/117 (62.39%), Postives = 90/117 (76.92%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M N+ YSQ VGS MYLMISTR DLSYS+SL+S+YMAN  +RHWEA KW++RYL    NA+
Sbjct: 74  MKNVPYSQAVGSLMYLMISTRPDLSYSASLVSKYMANSGRRHWEATKWIIRYLIWSKNAR 133

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
           L Y+   +   EL G+VD D+AGD DKRRSLTGY FL G NL++WKA+LQ +V LS+
Sbjct: 134 LNYQRTTEIELELIGYVDSDFAGDSDKRRSLTGYVFLYGRNLISWKAILQSIVALST 190

[Close]

BLAST of Cmc06g0174401 vs. NCBI nr
Match: XP_038895984.1 (secreted RxLR effector protein 161-like [Benincasa hispida])

HSP 1 Score: 145.6 bits (366), Expect = 3.4e-31
Identity = 73/117 (62.39%), Postives = 92/117 (78.63%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M+ I YSQVVGS MYLM+STR D++Y++SL+SRYMANP KRHWEA KW++RYLKG  +A+
Sbjct: 34  MSTIPYSQVVGSLMYLMVSTRLDIAYATSLVSRYMANPGKRHWEATKWIMRYLKGTTSAK 93

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
           LMY+       +L G+VD DYAGDLDKRRSL+GY FL G  +L+ KA LQ +V LS+
Sbjct: 94  LMYQQLPNREPKLIGYVDSDYAGDLDKRRSLSGYIFLYGRCVLSRKATLQSIVALST 150

[Close]

BLAST of Cmc06g0174401 vs. NCBI nr
Match: KAA0046926.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M +I YS   GS MYL++ TR DL++ SS++SRYM NP + HWEA KWV  YLKG  N  
Sbjct: 32  MESIPYSNATGSLMYLIVCTRPDLAHYSSIVSRYMGNPGRAHWEATKWVFLYLKGLSNRG 91

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
           L+YK        LYG+VD DYAGDLDKRRSL G+ F++GGN+++WK+ LQPVVTLS+++ 
Sbjct: 92  LLYKHLKSIELNLYGYVDSDYAGDLDKRRSLIGFTFVLGGNVISWKSNLQPVVTLSTLEA 151

Query: 121 LKVLALEFLE---FLTSLIEE 139
             +   E ++   +L  ++EE
Sbjct: 152 ESIAMTEAVKETIWLKGILEE 172

[Close]

BLAST of Cmc06g0174401 vs. NCBI nr
Match: TYK03226.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 4.9e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M +I YS   GS MYL++ TR DL++ SS++SRYM NP + HWEA KWV  YLKG  N  
Sbjct: 32  MESIPYSNATGSLMYLIVCTRPDLAHYSSIVSRYMGNPGRAHWEATKWVFLYLKGLSNRG 91

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
           L+YK        LYG+VD DYAGDLDKRRSL G+ F++GGN+++WK+ LQPVVTLS+++ 
Sbjct: 92  LLYKHLKSIELNLYGYVDSDYAGDLDKRRSLIGFTFVLGGNVISWKSNLQPVVTLSTLEA 151

Query: 121 LKVLALEFLE---FLTSLIEE 139
             +   E ++   +L  ++EE
Sbjct: 152 ESIAMTEAVKETIWLKGILEE 172

[Close]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.4e-21
Identity = 53/127 (41.73%), Postives = 76/127 (59.84%), Query Frame = 0


Query: 1    MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
            MA + YS  VGS MY M+ TR D++++  ++SR++ NP K HWEA KW+LRYL+G     
Sbjct: 1106 MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1165

Query: 61   LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
            L +         L G+ D D AGD+D R+S TGY F   G  ++W++ LQ  V LS+ + 
Sbjct: 1166 LCFG---GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEA 1225

Query: 121  LKVLALE 128
              + A E
Sbjct: 1226 EYIAATE 1229

[Close]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 45/117 (38.46%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M N+ Y   VG+ MYLM+ TR DL+ +  ++S++ ++P   HW+A K VLRYL+      
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
           L  +       +L G+ D D+AGD++ RRS +GY F + G  ++W++  Q  V LSS
Sbjct: 61  L--EFTRAGTAKLVGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSS 115

[Close]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 49/143 (34.27%), Postives = 78/143 (54.55%), Query Frame = 0


Query: 3    NISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLM 62
            N     ++G  MY+M+ TR DL+ + +++SRY +  +   W+  K VLRYLKG ++ +L+
Sbjct: 1178 NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLI 1237

Query: 63   YKICLKELFELYGFVDFDYAGDLDKRRSLTGYYF-LIGGNLLTWKALLQPVVTLSSIKFL 122
            +K  L    ++ G+VD D+AG    R+S TGY F +   NL+ W    Q  V  SS +  
Sbjct: 1238 FKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTE-- 1297

Query: 123  KVLALEFLEFLTSLIEERSLKFL 145
                 E++    ++ E   LKFL
Sbjct: 1298 ----AEYMALFEAVREALWLKFL 1314

[Close]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 6    YSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLMYKI 65
            Y  +VGS  YL   TR DLSY+ + +S+YM  P+  HW A K VLRYL G  +  +  K 
Sbjct: 1228 YRGIVGSLQYLAF-TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK- 1287

Query: 66   CLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
                   L+ + D D+AGD D   S  GY   +G + ++W +  Q  V  SS
Sbjct: 1288 -KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSS 1336

[Close]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.9e-09
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 0


Query: 6    YSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLMYKI 65
            Y  +VGS  YL   TR D+SY+ + +S++M  P++ H +A K +LRYL G  N  +  K 
Sbjct: 1245 YRGIVGSLQYLAF-TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK- 1304

Query: 66   CLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
                   L+ + D D+AGD D   S  GY   +G + ++W +  Q  V  SS
Sbjct: 1305 -KGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSS 1353

[Close]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL
Match: A0A5D3BYG1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00390 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M +I YS   GS MYL++ TR DL++ SS++SRYM NP + HWEA KWV  YLKG  N  
Sbjct: 32  MESIPYSNATGSLMYLIVCTRPDLAHYSSIVSRYMGNPGRAHWEATKWVFLYLKGLSNRG 91

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
           L+YK        LYG+VD DYAGDLDKRRSL G+ F++GGN+++WK+ LQPVVTLS+++ 
Sbjct: 92  LLYKHLKSIELNLYGYVDSDYAGDLDKRRSLIGFTFVLGGNVISWKSNLQPVVTLSTLEA 151

Query: 121 LKVLALEFLE---FLTSLIEE 139
             +   E ++   +L  ++EE
Sbjct: 152 ESIAMTEAVKETIWLKGILEE 172

[Close]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL
Match: A0A5A7TY71 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00940 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.4e-30
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 0


Query: 1   MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
           M +I YS   GS MYL++ TR DL++ SS++SRYM NP + HWEA KWV  YLKG  N  
Sbjct: 32  MESIPYSNATGSLMYLIVCTRPDLAHYSSIVSRYMGNPGRAHWEATKWVFLYLKGLSNRG 91

Query: 61  LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF 120
           L+YK        LYG+VD DYAGDLDKRRSL G+ F++GGN+++WK+ LQPVVTLS+++ 
Sbjct: 92  LLYKHLKSIELNLYGYVDSDYAGDLDKRRSLIGFTFVLGGNVISWKSNLQPVVTLSTLEA 151

Query: 121 LKVLALEFLE---FLTSLIEE 139
             +   E ++   +L  ++EE
Sbjct: 152 ESIAMTEAVKETIWLKGILEE 172

[Close]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL
Match: A0A5A7U2U7 (Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00590 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1    MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
            M+NI Y   VGS MYLMI TR DL Y+ S+ISR+M+NP K HW+A KWVLRYLKG  +  
Sbjct: 1091 MSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVS 1150

Query: 61   LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
            L Y     +   L GF D DYA DLDKRRSL+G+ F + GN+++WK  LQPVV LS+
Sbjct: 1151 LCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALST 1207

[Close]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL
Match: A0A5D3CTV2 (Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00910 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1    MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
            M+NI Y   VGS MYLMI TR DL Y+ S+ISR+M+NP K HW+A KWVLRYLKG  +  
Sbjct: 949  MSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVS 1008

Query: 61   LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
            L Y     +   L GF D DYA DLDKRRSL+G+ F + GN+++WK  LQPVV LS+
Sbjct: 1009 LCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALST 1065

[Close]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL
Match: A0A5A7UB25 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold560G00190 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.1e-27
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0


Query: 1    MANISYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQ 60
            M+NI Y   VGS MYLMI TR DL Y+ S+ISR+M+NP K HW+A KWVLRYLKG  +  
Sbjct: 1119 MSNIPYCNAVGSIMYLMICTRPDLGYAMSMISRFMSNPGKEHWKAVKWVLRYLKGSASVS 1178

Query: 61   LMYKICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
            L Y     +   L GF D DYA DLDKRRSL+G+ F + GN+++WK  LQPVV LS+
Sbjct: 1179 LCYSRDCDKSTLLEGFTDADYAADLDKRRSLSGHIFRLYGNVVSWKVNLQPVVALST 1235

[Close]

BLAST of Cmc06g0174401 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-10
Identity = 38/113 (33.63%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 5   SYSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLMYK 64
           +Y +++G  MYL I TR D+S++ + +S++   P   H +A   +L Y+KG +   L Y 
Sbjct: 377 AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS 436

Query: 65  ICLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSS 118
              +   +L  F D  +    D RRS  GY   +G +L++WK+  Q VV+ SS
Sbjct: 437 --SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSS 486

[Close]

BLAST of Cmc06g0174401 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 6.0e-10
Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 0


Query: 6   YSQVVGSTMYLMISTRSDLSYSSSLISRYMANPSKRHWEAAKWVLRYLKGFLNAQLMYKI 65
           +  +VG+  YL + TR D+SY+ +++ + M  P+   ++  K VLRY+KG +   L   I
Sbjct: 100 FRSIVGALQYLTL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY--I 159

Query: 66  CLKELFELYGFVDFDYAGDLDKRRSLTGYYFLIGGNLLTWKALLQPVVTLSSIKF-LKVL 125
                  +  F D D+AG    RRS TG+   +G N+++W A  QP V+ SS +   + L
Sbjct: 160 HKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 219

Query: 126 ALEFLEFLTS 135
           AL   E   S
Sbjct: 220 ALTAAELTWS 226

The following BLAST results are available for this feature:

BLAST of Cmc06g0174401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877926.1	8.6e-35	57.53	secreted RxLR effector protein 161-like [Benincasa hispida]	[more]
XP_031737558.1	9.0e-32	62.39	secreted RxLR effector protein 161-like [Cucumis sativus]	[more]
XP_038895984.1	3.4e-31	62.39	secreted RxLR effector protein 161-like [Benincasa hispida]	[more]
KAA0046926.1	4.9e-30	51.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK03226.1	4.9e-30	51.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc06g0174401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	7.4e-21	41.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P0CV72	1.2e-15	38.46	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
P04146	1.6e-12	34.27	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	2.0e-10	38.39	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	2.9e-09	35.71	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of Cmc06g0174401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BYG1	2.4e-30	51.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7TY71	2.4e-30	51.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7U2U7	1.1e-27	57.26	Retrotransposon protein, putative, Ty1-copia sub-class OS=Cucumis melo var. maku...	[more]
A0A5D3CTV2	1.1e-27	57.26	Putative polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488...	[more]
A0A5A7UB25	1.1e-27	57.26	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Cmc06g0174401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	4.6e-10	33.63	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.0e-10	33.85	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF308	SUBFAMILY NOT NAMED	coord: 10..98
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 10..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0174401.1	Cmc06g0174401.1	mRNA