Cmc06g0174341 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0174341
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	serine/arginine-rich splicing factor RS40-like isoform X1
Location	CMiso1.1chr06: 31321584 .. 31328094 (+)
RNA-Seq Expression	Cmc06g0174341
Synteny	Cmc06g0174341

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAAATCTTCTTTCTAAATCTTGACTAAGCAATTAAAATAATACAGAGTACTAAAAATACAAACAATAATAGAAAAAAATAAAAAAAATCCCGAATCATATTTTTATAAATTAAAATTAGGGATTAAAAAGAAAAGAATTAAAATAATAATAAAAAAAAAGACTACAACCACCCCAGCGGTTCGCACTCCTCTCTCTCTCGCAATCCCCATCCCTCTCCGGCAGCGGGCTACTACGACGGTGACGCGGCTTCTCTTGGGGGCACGACCAGGCGACAGCGCAACCCAGCGCAGATCTGCAATATTACCCACCTCCGGCGTTTGATCGCCTACGCAACAACGTATCTCGGCGACACTCGGATCTGCAACGCCCTCACCCTCGGGTCGCTGGATCTGGCTACACACACACCTCGACGGCCCGATCTACGGCGTAAACTCATTTGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGCCTCAGTTCTCCTTCAGTTACGATTTCGCAAGATCCAAGTCGGCAGGGACGGTTTCAGGAACTCAAACAATTAGCAATTGACGCGCATTAAGAAGGAACATAGTAAGTGTTTGTCATTTTAGGAATTTTTATTCTCTGACTTAAATTTTCTTGTATGCTTCTGGTTGCGCATCAAATTGTGTTGTGAATTGTATGCTTGGATATGTTTGGGAACAAACACTTCTTTTTTTTTTTTTTTTTCATTTTTATCGCAGTTGCTTATGTTAATGTCAAATTGTATGTTTTTCTGTTAACTGTTGGGTTGATAGTTGAAATTATGGAGTTCCATTGGATGATTATGGTCGGCCATTTACAAGAATAATACCTCTATAACCATATGATTGACCTACTGATAAATGAAAACATGACCTAGTTAGAAGGGATAAGAGTTCATAGTTAAATCTATGATAGACCACATAATAGTTAGAAGGGATAAGAGGTTATAGTTAAATCTATGGTAGACCACAACTTAGTATTTAATATTTGGATAAGGGTTTTTTTTATACAAATATTGTACGGTTAAGATAAGTTGCTGTGAGATTAGTTGAGGTGTTCGGCTTGTTGGATGGTTACAAATATATAAAAAAAGATAAAAAAGAAGAGAAAGAATGATACCTCTATAGTGATGATCAATGAGACTAGCTTAGCTTGTCTAAGAATGATACCTGGTGTTTTGCTCTAGGCTCCAGAAAGCATTTATATAGCACTAAAAGTTGTGGTTGTAAGTGGTTAGAATTTGGAACTTAGGACCTCAAATGTTGGATATAGCTGGTCAAACTTATAGAGCCTTTTGTATGAAGCAAAAGGTCATAAATTTATTTCCTTTTCCCCTTCTCTCTTTGTCAATCATGGGTCCTCACTTTTGATATCTACTTCAAATATTAAAACAGTTATTATTATTGAGATGACCAACGCCTGAAAGCGTTTGATGATGGTTTCAGTTTTGGACACGGTTAACCATAAGCTGCGAGGTTTTTTATTTGTTTTTTTTTTTTTTGATTTTTTTTGGGAATTCGTTAAATAGAAAATAAAAACATTGCATGGGGAAACATTGTTAATTGATTAATTACGATTTTGTTCACTGTACTTACATTCAAATATCCAAATTTAGTCTCTACTCATAATACTTCAAATTTGTCCTCACTGTTTGTTTATCGTTTATTTTTTTATTTTATGACATTAGGTCTTAATTAACCTTCTCTATCAATTTTGAAAATACAATTACAGTTGTCTTTTCTTGAATGGAAAAATACATATTTTTTATTTAACCAATTTGATAGAAATTAAAACTATGTAAGAATTATAAAATAAAGGGAAATTTGCATAAATCACCCTTCTACCCTTCTAGAATGAGGTTTGGTTACAATTACACTAAAAAACTTTTAGTTTGATCAATTATACCCTTATATTTTGCTAGTGGTTGCAATTAGCCCTTTTTAAATTAACATTTATTACTTTAAAACTAAAAAGTAAATAAAAATAAGGATTCTTTCTCATCTCACATTCCTTTATCTCTCCTCTTTCTTCTTCTTCTACCATTTCTCCCCATCTCCATCTTCCCGCTCTGGACAACAAATAAACTAAACAATTCAAACCTTTTACTAATTTCAATTTGAAGTTAGTAGAAGTGGGAGATACAATTGAATTGTGCAATAAAAATGATTCAAGTATTGCCATAAAATTTAATAGCATTGCCCTTGATTTTCAGTGCAATATTGAAGACCTCAGTATTCTTGTTCTCCTCTCTTCTTATTTCTTTGTTTTCTCTTGTTTTCTTGTTCCTTTTTGTTCTTCTTTCTTTTTTTGTTTCACCGCTTGTTTTCTTCCATCTTTCTCATATTTTATCATGTTCAAAATCGACCAAGTTTCTTTTGAGATAAAATAGAAATGGCCATATATTTATCTATTGAAAAAGTTATGAAATAGAGCCAAATCAAGATATTCTTTTTAAATTAACCTTTTTTTTTCTCGTTTTACACCTTCCGACAAAGAAAGCTCATTCCCTCATTTTATGGAAAATGCAACTGAAGTTTCAAAGTCTCCCACTTCTCGTAACTCGAATCGGAATTTGTATAAGGTTTGGATTGTTTATTACAAAGGTTTGAATTGTTTATTATAAAGGTTTGAATTGTTTAGTTTATTTGTTTCTTAGAGAAGGGGGAGAGAAAGATGAAGATGAAGACCAAAGGGATGATGGAGGGAGAAGAAGAAGAGAGAAAATCTTTATTTTTATTTTTCAATTTTAAAATATCAAATTATAATTAAAGAAATAAAGGTTAATTTAAAAATGAGGTTAATTGCAACCATCAACAAATTATAAGAGCATAATCGATCAAATTGAAAGTTGTAATTGTAACAACCCCATAGTTTAGGGGTGGTTTATGCAATTTTCCTTACAATAAATGGACTCTATTTGGACATTTAAAAGTATTGAAGTAAACTAAAATGGAATGAGATCCCAAGTATAAGAATCAAAATATAATTATTTATAATTTTAAAAACTAAACGATAACGTATCACATTTAAAAGTGTTACACCATTATAAATATCATTTTTTAAAGAAGCAATTCTTTAGGAAAAACAATTTGACACAGGCTTGCTTAACTTATTTGCAGCTTAAGTACTGCATAGTTGTTGATTCTTAAAATACGATCTTTACTTTTACAATTCGTTTCAAATAACTTTCTTGTTGATGTGGTGAAACTAGGTTTCAGGAACTATGACGCCTTTGTATATTTTCATTTTTTATTTTTACAGAAGTAATAATAAGATACGTCTGCTGTATTATTTTTTATATAAATATGTACTGATATATTTAAAAGTACAATATCTTGTATGTTATTTTGTAAATTTGGAAACAGGCTTATTTGCAAAAGGTAAGTACATGGTGGTTATGATCTTTTTTCTAATGTGTTCACTTGGGATTATTTTCAAATAGTTGTCTTGTTGATGTCTGTCTGGTTCCCTTTTCCAGTTCGCGTTCTTTTTTTACTCTCCCTCCTAGGTAGGTTGTATCCTTGAAATTTCATTCTTATTTTCATATATCAATGAAAAGTTTGCTTATTGTTGAAATAAAATGGTTGTCGAGTTGATGTGGTGAAATTAAGTTTCGTGAACTTAATGCCGTGTTTGTATGTGTTTTTGTTTTTATCATGCAAGAGATTGTTAAATGTTGTATTGTTTTTCCAATTTTTGTTCAGGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGTGAGCTTCTAGCCGTAAAATGCATGTTTATTTTTAATTCCTTCTTTTATCTAATAAACTTATAAGACGTATACTATAAACACAGAGAGGGCGTTTGTGTTCTTTTCCTGAATTTGTTTTGAAGTAGTGTGTAATTTTTTCACGCGGATCATACCAATTGCAAAAAGGAAAAACAAAAATTGTAATTTGCAGAGTCGCTGATAATATTTAATATATGAAAAATGCTGAACTGAAAAAGTAACTCTATCAACCAAGAAAGTGTTGGATCAATTATCGGTAAGACAACCCAGCGGTTGGAAATTCCTCCAAAGCAGTTCTCGTTGCATTTGGTGCCTTGCAATACGAATGGGCATCGTCCAGCATATGGAAATCAGAGAAGGCAACATTTGTTGAGTGTTTGGTGGAGGATTCTAAAAAAGTTTTGAGAAAAGAAGAGCGTATATTTTAAATCCTAAAACTCCTTGGCCAGAATTTTCTTTGGTGCAGGATTTCCTTCGCACATTCATAATCTCCTTGGATAAAGATTGGTCTACAGAATTGAGTTTTCCACCTGTGACAGGCTTCCTCTTCTTGTTTCCAAGAAGATCCATGATCCTCAATGGCACTACCACCTTACATTTTCCTCAGACACTTTGCTTTCCATTTCTCGTGACTTTTGCCTGCCTACAATTTCATACGTTGTTTCGAGGTTGAAACATTGTCAACCTTAGCTCCAAGGCTGCGGAATAATGGAGAAGGCACTTTCTATTTGTAGACCTACCATGAGACATCCTGTTTTTCATTGCTCCTTGACACCACTTAGTTCACAATACAAGGTCTGTTGCTAAATTCACTGGTAACTTAGTCTATAGATTTCACGGTGGTTGCAAATATTTCTTTCTTATGGTAAGAACTTTTTGTGGTTTGTTGAATATATGTTCTAGAAAGGTGATGTTGCATTTTGAGGAGTTCTTCAGTGGGAAAATTCTCAGTCTTGTAACATTGTTACTGTCTCATAGATCCACAGTTAGTTATTCAGTTTTGGTTGTTTGATTGGTTTCCAGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAAGTAACGCACATTGATTTGACACATTTTCCAACAAAGTCTTTCCTTTCCATCCCTTTGTGGAACTTTTATTTGATTTTATTTACCATAGCTTCTACTGTAGTTTGTATTTTGATTGATCATTCTTTTCTCTGTAGCAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGGTGCGTTTTTCTTCTTTGAATTGCATTTTAAGTGAGTAGGTCACTATATCGTTATTGTTATGCCTTAATTATTATTATTGTGTACAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGGTTTGTACTATGAGTTCATTTGATTGTTTTTACTATTACTATTCTTGATTCTTTTTTGAATTTTTTGTCTTATGCCTGCGTTCGTGTTATGGTTTCGCAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAAATGGGAAGTGACATCGATGATCTCATTTGCTTCAGAGTATGTTTAGTTGTATAATCAGTATTAGTGGTAAACACATGTATTTGTAAGGATAAAGTTTCATTTGTGGTTCTTCAGTTTGTAGCGATTCTATGGATATGCTGTTGCCAGATTTTAGTTAACAATCAAAATACACAGCACTCTGATCTTTAGCTAGTTGTGAGTGACGTTGGCTTTTGGCAGTTTAAAAGCACTTTTCAAAATTATTGTTCATACTGTTTGAGTTTTTCAAGGAGGGTTTGGGTTGTTATATCATTTATCAACAATGCTT

mRNA sequence

TGAAAAATCTTCTTTCTAAATCTTGACTAAGCAATTAAAATAATACAGAGTACTAAAAATACAAACAATAATAGAAAAAAATAAAAAAAATCCCGAATCATATTTTTATAAATTAAAATTAGGGATTAAAAAGAAAAGAATTAAAATAATAATAAAAAAAAAGACTACAACCACCCCAGCGGTTCGCACTCCTCTCTCTCTCGCAATCCCCATCCCTCTCCGGCAGCGGGCTACTACGACGGTGACGCGGCTTCTCTTGGGGGCACGACCAGGCGACAGCGCAACCCAGCGCAGATCTGCAATATTACCCACCTCCGGCGTTTGATCGCCTACGCAACAACGTATCTCGGCGACACTCGGATCTGCAACGCCCTCACCCTCGGGTCGCTGGATCTGGCTACACACACACCTCGACGGCCCGATCTACGGCGTAAACTCATTTGGACGACGATCGAGACTCGCGGTAAGTAACTCAGTGCCTCAGTTCTCCTTCAGTTACGATTTCGCAAGATCCAAGTCGGCAGGGACGGTTTCAGGAACTCAAACAATTAGCAATTGACGCGCATTAAGAAGGAACATAGTAGTATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGCAGCCGTTCACCACAAGCAGAGGAATGATGAACTAGAAAATGGGAAGTGACATCGATGATCTCATTTGCTTCAGAGTATGTTTAGTTGTATAATCAGTATTAGTGGTAAACACATGTATTTGTAAGGATAAAGTTTCATTTGTGGTTCTTCAGTTTGTAGCGATTCTATGGATATGCTGTTGCCAGATTTTAGTTAACAATCAAAATACACAGCACTCTGATCTTTAGCTAGTTGTGAGTGACGTTGGCTTTTGGCAGTTTAAAAGCACTTTTCAAAATTATTGTTCATACTGTTTGAGTTTTTCAAGGAGGGTTTGGGTTGTTATATCATTTATCAACAATGCTT

Coding sequence (CDS)

ATGAAGCCAATTTTTTGTGGAAACTTCGAGTATGATGCTCGACAGCCTGATCTGGAAAGACTTTTTAGTCGATATGGAAAAGTTGATAGAGTAGATATGAAATCTGGGTTTGCTTTTATCTACATGGAGGATGAGAGAGAGGCTGAGGATGCTATCCATGCACTCGATCGGAGAGAATTTGGCCGAAAGGGTCGCAGACTACGTGTTGAGTGGACCAAACAAGAGCGTGGCATTAGAAGACCTAGTGGAGGTGGAGGTGGAAGTGGAGGCGGTTCGAGGAGATCCTCTTCTAATACAAGACCTTCAAAAACTTTATTTGTCATTAACTTTGATCCATATCATACAAGGATAAGAGATTTGGAGAGGCACTTCGATCCGTATGGTAAGATATTGAATGTAAGGATTCGAAGGAATTTTGCATTTGTCCAGTATGAACTGCAGGAGGATGCCACTAGAGCGTTGGAGGTTACAAACATGAGCAAATTGATGGACCGAGTGATTTCTGTGGAATATGCTGTTCGAGATGATGATGAGAAAAGAAATGGATATAGTCCAGATAGGAATCGTGATAGGTCTCCTGATAGAAAACGACGATCCCCAAGTCCTTATAGGAGGGAGCGAGGAAGCCCCGATTATGGCAATGGTATTAGCCGCAGTCCATATAGGAGGCAAAGGGCTAGTCCTGATTATGGAAGTCGTCGTAGTCCAAGTCCTTATCAGAGAGAGAGGGAGAGAGGATCTCCTGATTATGGCCGTGGTCGTAGTCCCAAGCATAGTCCTTATAGGAGGGAGAGAGAAAGATCAAGTGACCATACTAGGGCTCCCAGCCACAGTCCTCCCCATCAGAGGGAAAGACCAAATGGTGACCGAATCCCCAACCGAAGTCCTAGTCCTTACAGGAGAGAGAGGGAGAGGAGGAGTCCTATTGATGATGGACGTGGCACAAGCTATAGTCCTCGTGATAGAGAAAGGTCGAACCCGGACAACGGCCATGATCACCAGGAGAATACAGTAGCTGAACCCGGTGAGTGCCCCAGTTACAGTGGCACTCAGAGCCCGAAGCATCGGGGATATAACAGCAGCCGTTCACCACAAGCAGAGGAATGA

Protein sequence

MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE

Homology

[Close]

BLAST of Cmc06g0174341 vs. NCBI nr
Match: XP_008449096.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis melo])

HSP 1 Score: 711.4 bits (1835), Expect = 3.9e-201
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS SP HQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 368

[Close]

BLAST of Cmc06g0174341 vs. NCBI nr
Match: XP_008449098.1 (PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis melo])

HSP 1 Score: 705.7 bits (1820), Expect = 2.1e-199
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS SP HQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN- 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Cmc06g0174341 vs. NCBI nr
Match: XP_011650502.1 (serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus])

HSP 1 Score: 694.9 bits (1792), Expect = 3.8e-196
Identity = 359/368 (97.55%), Postives = 360/368 (97.83%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERGSPI-GGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Cmc06g0174341 vs. NCBI nr
Match: KAE8650115.1 (hypothetical protein Csa_009778 [Cucumis sativus])

HSP 1 Score: 694.9 bits (1792), Expect = 3.8e-196
Identity = 359/368 (97.55%), Postives = 360/368 (97.83%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 13  MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 72

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 73  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 132

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 133 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 192

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ
Sbjct: 193 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 252

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPN DRIPNRSPSPYR
Sbjct: 253 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 312

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 313 RERERGSPI-GGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 372

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 373 SRSPQAEE 379

[Close]

BLAST of Cmc06g0174341 vs. NCBI nr
Match: XP_011650503.1 (serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus])

HSP 1 Score: 689.1 bits (1777), Expect = 2.1e-194
Identity = 358/368 (97.28%), Postives = 359/368 (97.55%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 
Sbjct: 301 RERERGSPI-GGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN- 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 366

[Close]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot
Match: P92965 (Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS40 PE=1 SV=2)

HSP 1 Score: 392.5 bits (1007), Expect = 5.2e-108
Identity = 229/369 (62.06%), Postives = 272/369 (73.71%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot
Match: P92966 (Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS41 PE=1 SV=2)

HSP 1 Score: 382.9 bits (982), Expect = 4.2e-105
Identity = 232/373 (62.20%), Postives = 263/373 (70.51%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDY---GRGRSPKHSPYR-RERERSSDHTRAPSHSPPHQRERPNGDRIPNRS 300
           +R R   SPDY    R R    SP     R RS    R  S SPP     P   R  +RS
Sbjct: 241 KRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPP-----PYEKRRESRS 300

Query: 301 PSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKH 360
           P PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP  
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIR 356

Query: 361 RGYNSSRSPQAEE 369
              + SRSP AEE
Sbjct: 361 E--SPSRSPPAEE 356

[Close]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot
Match: P92964 (Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS31 PE=1 SV=2)

HSP 1 Score: 261.5 bits (667), Expect = 1.4e-68
Identity = 163/292 (55.82%), Postives = 195/292 (66.78%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+P+F GNFEY+ RQ DLERLF +YG+VDRVDMKSG+AF+Y EDER+AEDAI  LD   F
Sbjct: 1   MRPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           G + RRL VEW K ERG  RP         G  ++ SN +P+KTLFVINFDP  T+  D+
Sbjct: 61  GYEKRRLSVEWAKGERG--RPR--------GDAKAPSNLKPTKTLFVINFDPIRTKEHDI 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGK+ NVRIRRNF+FVQ+E QEDAT+ALE T  SK++DRV+SVEYA++DDDE+ 
Sbjct: 121 EKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDER- 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSP---- 240
                DRN  RSP   RRS SP  R R SPDYG     SP + +R SPDYG  RSP    
Sbjct: 181 ----DDRNGGRSP---RRSLSPVYRRRPSPDYGR--RPSPGQGRRPSPDYGRARSPEYDR 240

Query: 241 --SPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERP 287
              P   ER R SPDYGR    + S Y R+R    D  R+ S   P  R RP
Sbjct: 241 YKGPAAYERRR-SPDYGR----RSSDYGRQRSPGYDRYRSRS---PVPRGRP 264

[Close]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot
Match: Q9ZPX8 (Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS31A PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.8e-63
Identity = 145/286 (50.70%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           M+ ++ GNF+YD R  DLERLFS++G+V RVDMKSG+AF+Y EDER+AEDAI   D   F
Sbjct: 1   MRHVYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTF 60

Query: 61  GRKGRRLRVEWTKQERGIR-RPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRD 120
           G   R+L VEW K  +G R +P  G         ++ SN RP+KTLFVINFDP  TR RD
Sbjct: 61  GYGRRKLSVEWAKDFQGERGKPRDG---------KAVSNQRPTKTLFVINFDPIRTRERD 120

Query: 121 LERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEK 180
           +ERHF+PYGK+LNVR+RRNFAFVQ+  QEDAT+AL+ T+ SKL+D+V+SVEYA+R+  E+
Sbjct: 121 MERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGER 180

Query: 181 RNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPY 240
            + Y        +  R+RRSPSP  R R SPDY           +R SP+Y   + P+PY
Sbjct: 181 EDRY--------AGSRRRRSPSPVYRRRPSPDY----------TRRRSPEYDRYKGPAPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRER 286
           +R   R SPDYGR              RSSD+ RA + SP + R R
Sbjct: 241 ER---RKSPDYGR--------------RSSDYGRARARSPGYDRSR 242

[Close]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot
Match: O22315 (Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR34 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.0e-14
Identity = 91/299 (30.43%), Postives = 134/299 (44.82%), Query Frame = 0


Query: 2   KPIFCGNFEYDARQPDLERLFSRYGKVDRVDMK-----SGFAFIYMEDEREAEDAIHALD 61
           + ++ GN   D R+ ++E LFS+YG V ++D+K      G+AF+  +D R+AEDAIH  D
Sbjct: 7   RTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAEDAIHGRD 66

Query: 62  RREFGRKGRRLRVEW-------TKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVIN 121
             +F   G RLRVE        +   RG     G GGG G G   S   +R S+   ++ 
Sbjct: 67  GYDF--DGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVT 126

Query: 122 FDPYHTRIRDLERHFDPYGKILNVRIRRN----FAFVQYELQEDATRALEVTNMSKLMDR 181
             P     +DL+ H    G +   ++ R+       V Y   ED   AL+  + ++  + 
Sbjct: 127 GLPSSASWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNA 186

Query: 182 VISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSP-YRRQ 241
             +    VR+ D +++  SP R R  S  R R       R R         SRSP  +  
Sbjct: 187 FSNGYVRVREYDSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSR---SRSRSRSPKAKSS 246

Query: 242 RASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQR 284
           R SP   + RSP P  + R   SP   R RS    P  ++    S    +P+ SP H R
Sbjct: 247 RRSPAKSTSRSPGPRSKSRS-PSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIHTR 299

[Close]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL
Match: A0A1S3BL99 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 1.9e-201
Identity = 365/368 (99.18%), Postives = 365/368 (99.18%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS SP HQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 368

[Close]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL
Match: A0A1S3BLX3 (serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491066 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.0e-199
Identity = 364/368 (98.91%), Postives = 364/368 (98.91%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQR SPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRTSPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS SP HQRERPNGDRIPNRSPSPYR
Sbjct: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSRSPLHQRERPNGDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 
Sbjct: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN- 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL
Match: A0A0A0L7I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.8e-196
Identity = 359/368 (97.55%), Postives = 360/368 (97.83%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS+NTRPSKTLFVINFDPYHTRIRDL
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSTNTRPSKTLFVINFDPYHTRIRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR
Sbjct: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240
           NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ
Sbjct: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSPYQ 240

Query: 241 RERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPYR 300
           RERERGSPDY RGRSPKHSPYRRERERSSDH RAPSHSPPHQRERPN DRIPNRSPSPYR
Sbjct: 241 RERERGSPDYSRGRSPKHSPYRRERERSSDHIRAPSHSPPHQRERPNDDRIPNRSPSPYR 300

Query: 301 RERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360
           RERER SPI  GRG SYSPRDRER NPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS
Sbjct: 301 RERERGSPI-GGRGRSYSPRDRERLNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYNS 360

Query: 361 SRSPQAEE 369
           SRSPQAEE
Sbjct: 361 SRSPQAEE 367

[Close]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL
Match: A0A5D3BC56 (Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G002150 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.2e-178
Identity = 329/332 (99.10%), Postives = 329/332 (99.10%), Query Frame = 0


Query: 37  FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS 96
           FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS
Sbjct: 45  FAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSS 104

Query: 97  SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV 156
           SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV
Sbjct: 105 SNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV 164

Query: 157 TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI 216
           TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI
Sbjct: 165 TNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGI 224

Query: 217 SRSPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS 276
           SRSPYRRQR SPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS
Sbjct: 225 SRSPYRRQRTSPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPS 284

Query: 277 HSPPHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN 336
            SP HQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN
Sbjct: 285 RSPLHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQEN 344

Query: 337 TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 369
           TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE
Sbjct: 345 TVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 376

[Close]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL
Match: A0A1S4DXA1 (serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491067 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.9e-177
Identity = 339/380 (89.21%), Postives = 349/380 (91.84%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDER+AEDAI ALDRREF
Sbjct: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF 60

Query: 61  GRKGRRLRVEWTKQERGIRRP------SGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYH 120
           GRKGRRLRVEWTKQERGIRRP       GGGGG GGGSRRSS+NTRPSKTLFVINFDPYH
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYH 120

Query: 121 TRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVR 180
           TR RDLERHFDPYGKIL+VRIRRNFAFVQYELQEDATRALE+TNMSKLMDRVISVEYAVR
Sbjct: 121 TRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVR 180

Query: 181 DDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240
           DDD+KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR
Sbjct: 181 DDDDKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRR 240

Query: 241 SPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTR-APSHSPPHQRERPNGDRIPN 300
           SPSPYQRERERGSPDYGRGRSP HSPYRRERERSSDH R APS+ P HQRERPN DR+PN
Sbjct: 241 SPSPYQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPN 300

Query: 301 RSPSPYRRERERRSPIDDGRGTSYSPRDRER-SNPDNGHDH----QENTVAEPGECPSYS 360
           RSPSPY RERE+ SP  DGRGTSYSPRDRER SNPDNGHDH    Q+N V EPGE P+Y 
Sbjct: 301 RSPSPYGREREKGSP-TDGRGTSYSPRDRERSSNPDNGHDHGHDQQQNMVPEPGESPNYG 360

Query: 361 GTQSPKHRGYNSSRSPQAEE 369
            TQSPKHRGY SSRSPQAEE
Sbjct: 361 DTQSPKHRGY-SSRSPQAEE 378

[Close]

BLAST of Cmc06g0174341 vs. TAIR 10
Match: AT4G25500.1 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 392.5 bits (1007), Expect = 3.7e-109
Identity = 229/369 (62.06%), Postives = 272/369 (73.71%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of Cmc06g0174341 vs. TAIR 10
Match: AT4G25500.4 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 392.5 bits (1007), Expect = 3.7e-109
Identity = 229/369 (62.06%), Postives = 272/369 (73.71%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR EF
Sbjct: 1   MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GRKGRRLRVEWTK ER      GG   SGGGSRRSSS+ RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRKGRRLRVEWTKSER------GGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           E+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ +N SKLMD+VISVEYAV+DDD + 
Sbjct: 121 EKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISR-SPYRRQRASPDYGSRRSPSPY 240
           NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G S  + YR++R SPDYG RRSPSPY
Sbjct: 181 NGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPY 240

Query: 241 QRERERGSPDYGRGRSPKHSPYRRERERSSDHTRAPSHSPPHQRERPNGDRIPNRSPSPY 300
           ++ R RGSP+YGR R    SP RRER  S       S SP ++RER + +  P +  SP 
Sbjct: 241 KKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY---SRSPNNKRERMSPNHSPFKKESPR 300

Query: 301 RRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKHRGYN 360
               E  SPI+         R+R RS+P+NG      ++        Y G +SP  +   
Sbjct: 301 NGVGEVESPIE--------RRERSRSSPENGQVESPGSIGRRDSDGGYDGAESPMQKS-R 350

Query: 361 SSRSPQAEE 369
           S RSP A+E
Sbjct: 361 SPRSPPADE 350

[Close]

BLAST of Cmc06g0174341 vs. TAIR 10
Match: AT5G52040.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-106
Identity = 233/373 (62.47%), Postives = 264/373 (70.78%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDY---GRGRSPKHSPYR-RERERSSDHTRAPSHSPPHQRERPNGDRIPNRS 300
           +R R   SPDY    R R    SP     R RS    R  S SPP     P   R  +RS
Sbjct: 241 KRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPP-----PYEKRRESRS 300

Query: 301 PSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKH 360
           P PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP  
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSP-I 357

Query: 361 RGYNSSRSPQAEE 369
           R  + SRSP AEE
Sbjct: 361 RESSPSRSPPAEE 357

[Close]

BLAST of Cmc06g0174341 vs. TAIR 10
Match: AT5G52040.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 382.9 bits (982), Expect = 3.0e-106
Identity = 232/373 (62.20%), Postives = 263/373 (70.51%), Query Frame = 0


Query: 1   MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRREF 60
           MKP+FCGNFEYDAR+ DLERLF +YGKV+RVDMK+GFAF+YMEDER+AEDAI ALDR E+
Sbjct: 1   MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60

Query: 61  GRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRSSSNTRPSKTLFVINFDPYHTRIRDL 120
           GR GRRLRVEWTK +R       GG G  GGSRRSSS  RPSKTLFVINFD  +TR RDL
Sbjct: 61  GRTGRRLRVEWTKNDR-------GGAGRSGGSRRSSSGLRPSKTLFVINFDAQNTRTRDL 120

Query: 121 ERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEVTNMSKLMDRVISVEYAVRDDDEKR 180
           ERHF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+ TN SKLMD+VISVEYAV+DDD + 
Sbjct: 121 ERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRG 180

Query: 181 NGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYG-SRRSPSPY 240
           NGYSP+R RDRSPDR+RRSPSPYRRERGSPDYG G S   ++R+R SPDYG  RRSPSPY
Sbjct: 181 NGYSPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAHKRERTSPDYGRGRRSPSPY 240

Query: 241 QRERERGSPDY---GRGRSPKHSPYR-RERERSSDHTRAPSHSPPHQRERPNGDRIPNRS 300
           +R R   SPDY    R R    SP     R RS    R  S SPP     P   R  +RS
Sbjct: 241 KRARL--SPDYKRDDRRRERVASPENGAVRNRSPRKGRGESRSPP-----PYEKRRESRS 300

Query: 301 PSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQENTVAEPGECPSYSGTQSPKH 360
           P PY + RE RSP    +    S R R +S+P+NG       + E      Y G  SP  
Sbjct: 301 PPPYEKRRESRSPPPYEKRRERS-RSRSKSSPENGQVESPGQIMEVEAGRGYDGADSPIR 356

Query: 361 RGYNSSRSPQAEE 369
              + SRSP AEE
Sbjct: 361 E--SPSRSPPAEE 356

[Close]

BLAST of Cmc06g0174341 vs. TAIR 10
Match: AT4G25500.3 (arginine/serine-rich splicing factor 35 )

HSP 1 Score: 328.6 bits (841), Expect = 6.6e-90
Identity = 201/334 (60.18%), Postives = 239/334 (71.56%), Query Frame = 0


Query: 36  GFAFIYMEDEREAEDAIHALDRREFGRKGRRLRVEWTKQERGIRRPSGGGGGSGGGSRRS 95
           GFAF+YMEDER+AEDAI ALDR EFGRKGRRLRVEWTK ER      GG   SGGGSRRS
Sbjct: 3   GFAFVYMEDERDAEDAIRALDRFEFGRKGRRLRVEWTKSER------GGDKRSGGGSRRS 62

Query: 96  SSNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALE 155
           SS+ RPSKTLFVINFD  +TR RDLE+HF+PYGKI+NVRIRRNFAF+QYE QEDATRAL+
Sbjct: 63  SSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALD 122

Query: 156 VTNMSKLMDRVISVEYAVRDDDEKRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNG 215
            +N SKLMD+VISVEYAV+DDD + NG+SP+R RDRSP+R+RRSPSPY+RERGSPDYG G
Sbjct: 123 ASNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRSPERRRRSPSPYKRERGSPDYGRG 182

Query: 216 ISR-SPYRRQRASPDYGSRRSPSPYQRERERGSPDYGRGRSPKHSPYRRERERSSDHTRA 275
            S  + YR++R SPDYG RRSPSPY++ R RGSP+YGR R    SP RRER  S      
Sbjct: 183 ASPVAAYRKERTSPDYGRRRSPSPYKKSR-RGSPEYGRDRRGNDSPRRRERVASPTKY-- 242

Query: 276 PSHSPPHQRERPNGDRIPNRSPSPYRRERERRSPIDDGRGTSYSPRDRERSNPDNGHDHQ 335
            S SP ++RER + +  P +  SP     E  SPI+         R+R RS+P+NG    
Sbjct: 243 -SRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIE--------RRERSRSSPENGQVES 302

Query: 336 ENTVAEPGECPSYSGTQSPKHRGYNSSRSPQAEE 369
             ++        Y G +SP  +   S RSP A+E
Sbjct: 303 PGSIGRRDSDGGYDGAESPMQKS-RSPRSPPADE 317

The following BLAST results are available for this feature:

BLAST of Cmc06g0174341 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449096.1	3.9e-201	99.18	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X1 [Cucumis me...	[more]
XP_008449098.1	2.1e-199	98.91	PREDICTED: serine/arginine-rich splicing factor RS40-like isoform X2 [Cucumis me...	[more]
XP_011650502.1	3.8e-196	97.55	serine/arginine-rich splicing factor RS40 isoform X1 [Cucumis sativus]	[more]
KAE8650115.1	3.8e-196	97.55	hypothetical protein Csa_009778 [Cucumis sativus]	[more]
XP_011650503.1	2.1e-194	97.28	serine/arginine-rich splicing factor RS40 isoform X2 [Cucumis sativus]	[more]

BLAST of Cmc06g0174341 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92965	5.2e-108	62.06	Serine/arginine-rich splicing factor RS40 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92966	4.2e-105	62.20	Serine/arginine-rich splicing factor RS41 OS=Arabidopsis thaliana OX=3702 GN=RS4...	[more]
P92964	1.4e-68	55.82	Serine/arginine-rich splicing factor RS31 OS=Arabidopsis thaliana OX=3702 GN=RS3...	[more]
Q9ZPX8	1.8e-63	50.70	Serine/arginine-rich splicing factor RS31A OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
O22315	2.0e-14	30.43	Serine/arginine-rich-splicing factor SR34 OS=Arabidopsis thaliana OX=3702 GN=SR3...	[more]

BLAST of Cmc06g0174341 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL99	1.9e-201	99.18	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]
A0A1S3BLX3	1.0e-199	98.91	serine/arginine-rich splicing factor RS40-like isoform X2 OS=Cucumis melo OX=365...	[more]
A0A0A0L7I3	1.8e-196	97.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G063660 PE=4 SV=1	[more]
A0A5D3BC56	2.2e-178	99.10	Serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo var. m...	[more]
A0A1S4DXA1	1.9e-177	89.21	serine/arginine-rich splicing factor RS40-like isoform X1 OS=Cucumis melo OX=365...	[more]

BLAST of Cmc06g0174341 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25500.1	3.7e-109	62.06	arginine/serine-rich splicing factor 35	[more]
AT4G25500.4	3.7e-109	62.06	arginine/serine-rich splicing factor 35	[more]
AT5G52040.2	1.3e-106	62.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G52040.1	3.0e-106	62.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G25500.3	6.6e-90	60.18	arginine/serine-rich splicing factor 35	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 104..170 e-value: 1.6E-15 score: 67.6 coord: 3..70 e-value: 7.0E-15 score: 65.4
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..62 e-value: 1.1E-12 score: 47.6 coord: 105..167 e-value: 2.0E-11 score: 43.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 103..174 score: 14.896925
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..74 score: 16.3978
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 97..186 e-value: 1.4E-19 score: 72.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..96 e-value: 1.3E-19 score: 72.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 236..338
None	No IPR available	PANTHER	PTHR23147:SF165	BNAC01G41640D PROTEIN	coord: 4..211
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 4..211
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..97
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 83..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0174341.1	Cmc06g0174341.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding