Cmc06g0173631 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0173631
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr06: 30460384 .. 30462534 (-)
RNA-Seq ExpressionCmc06g0173631
SyntenyCmc06g0173631
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCGGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTGTTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTTTAGGAGTTCCTAGATACTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACACGAGGAGCATTTACGTATGGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGGTGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTGA

mRNA sequence

ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCGGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTGTTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTGA

Coding sequence (CDS)

ATGTTGTCGAAAGAAAAGGTGAAGGCATGCCAGATTGAGATATCAGGCCATGTGATTGAAGTAACGCTGATAGTTCTGGATATGCTGGACTTTGATGTAATCCTGGGTATGGATTGGTTGGCCGCCAACCACGCCAGTATAGATTGTTCACGTAAGGAGGTAACGTTTAACCCTCCCTCGATGGCCAGTTTTAAATTTAAGGGAGGAGGGTCAAAGTCGTTGCCTCAGGTAATCTCAGCCATCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGTGTGGTGGATACTAGAGAGGCGGATGTATCCCTGTCATCAGAACCGGTAGTGAGGGACTATCCGGACGTTTTTCCTGAGGAACTTCCAGGGTTACCTCCGCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCCCTTACAGAATGGCCCCCGCAGAACTGAAAGAACTGAAGGTACAGTTGCAGGAATTGCTTGATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTGTTTGTTAAGAAGAAGGATGGATCGATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATTGACGATCTATTTGACCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGAGGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTATTTATGGACTTGATGAACAGAGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGCTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGACCCTTAAACAGAAGCTAGTTACCGCGCCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTCGTGATTTATAGTGATGCTTCCAAGAAGGGTCTGGGTTGTGTTTTGATGCAGCAGGGTAAGAACTACCCTACACATGATCTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATGGAGGCATTATTTATATGGTGAAAAGATACAGATATTCACAGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGGTGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGGAAGGTGTCACATTCAGCAGCACTTATTACCCGGCAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTTACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAGAGGATCATTGATGCTCAGAGTAACGATCCTTATCTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAACGGCTGAGTTCTCGTTATCCTCTGATGGTGGACTGTTGTTTGAGAGACGCCTCTGTGTTCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCGCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAAGTAGCAGAATTTGTTAGTAAATGCCTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCTTGA

Protein sequence

MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQP
Homology
[Close]
BLAST of Cmc06g0173631 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 645/716 (90.08%), Postives = 646/716 (90.22%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1100

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 1101 QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1160

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 1161 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1220

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 1221 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1280

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH
Sbjct: 1281 RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 1340

[Close]
BLAST of Cmc06g0173631 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1241.9 bits (3212), Expect = 0.0e+00
Identity = 638/716 (89.11%), Postives = 640/716 (89.39%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 461  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 520

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLS EPVVRDYPDV
Sbjct: 521  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDV 580

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 581  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 640

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 641  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 700

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 701  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 760

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 761  DILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAK 820

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 821  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 880

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 881  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 940

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 941  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1000

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 1001 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1060

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAE GQ  EFSLSSDGGLLFERRLCVPSDSA+KTELLSEAH
Sbjct: 1061 RQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAH 1120

[Close]
BLAST of Cmc06g0173631 vs. NCBI nr
Match: KAA0036553.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1235.3 bits (3195), Expect = 0.0e+00
Identity = 631/693 (91.05%), Postives = 635/693 (91.63%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHV+EVTL+VLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 314  MLSKEKVKACQIEIAGHVVEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 373

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDV
Sbjct: 374  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 433

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEP TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 434  FPEELPGLPPHREVEFAIELEPDTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 493

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSG
Sbjct: 494  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSG 553

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 554  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 613

Query: 301  ------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 360
                              VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLA
Sbjct: 614  DILIYSKTEAEHEEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLA 673

Query: 361  GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFV 420
            GYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFV
Sbjct: 674  GYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 733

Query: 421  IYSDASKKGLGCVLMQQGK--------------NYPTHDLELAAVVFALKIWRHYLYGEK 480
            IYSDASKKGLGCVLMQQGK              NYPTHDLELAAVVFALKIWRHYLYGEK
Sbjct: 734  IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 793

Query: 481  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA 540
            IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA
Sbjct: 794  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA 853

Query: 541  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA 600
            LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Sbjct: 854  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA 913

Query: 601  GQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 647
            GQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW
Sbjct: 914  GQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 973

[Close]
BLAST of Cmc06g0173631 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 633/716 (88.41%), Postives = 640/716 (89.39%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVK CQIEI+GHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS
Sbjct: 427  MLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPS 486

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
             ASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 487  RASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 546

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 547  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 606

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 607  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 666

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 667  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 726

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 727  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 786

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 787  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 846

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 847  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 906

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 907  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 966

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 967  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1026

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAH
Sbjct: 1027 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAH 1086

[Close]
BLAST of Cmc06g0173631 vs. NCBI nr
Match: KAA0046094.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 636/716 (88.83%), Postives = 639/716 (89.25%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 2132 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 2191

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGIL SVVDTREADVSLSSEPVVRDYPDV
Sbjct: 2192 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILGSVVDTREADVSLSSEPVVRDYPDV 2251

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 2252 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 2311

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 2312 PWGAPVLFVKKKDGSMRLCIDYRELNKETVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 2371

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAF SRYGHYEFIVMSFGLTNAPAVFM+LMNR               
Sbjct: 2372 YHQLRIKDEDVPKTAFLSRYGHYEFIVMSFGLTNAPAVFMNLMNRVFREFLDTFVIVFID 2431

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 2432 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 2491

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 2492 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 2551

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 2552 QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 2611

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 2612 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 2671

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTL
Sbjct: 2672 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERVEIAVSVGAVTMQLAQLTVQPTL 2731

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQT EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH
Sbjct: 2732 RQRIIDAQSNDPYLVEKRGLAEAGQTDEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 2791

[Close]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-69
Identity = 170/605 (28.10%), Postives = 285/605 (47.11%), Query Frame = 0 

Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------ 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N                  
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 --------------------------------------RVSFLGHVVSKAGVSVDPAKIE 362
                                                 +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 422
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-------------------N 482
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                     N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 602
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAV 647
           +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-69
Identity = 170/605 (28.10%), Postives = 285/605 (47.11%), Query Frame = 0 

Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------ 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N                  
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 --------------------------------------RVSFLGHVVSKAGVSVDPAKIE 362
                                                 +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 422
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-------------------N 482
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                     N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 602
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAV 647
           +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-69
Identity = 170/605 (28.10%), Postives = 285/605 (47.11%), Query Frame = 0 

Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------ 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N                  
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 --------------------------------------RVSFLGHVVSKAGVSVDPAKIE 362
                                                 +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 422
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-------------------N 482
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                     N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 602
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAV 647
           +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-69
Identity = 170/605 (28.10%), Postives = 285/605 (47.11%), Query Frame = 0 

Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------ 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N                  
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 --------------------------------------RVSFLGHVVSKAGVSVDPAKIE 362
                                                 +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 422
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-------------------N 482
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                     N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 602
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAV 647
           +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-69
Identity = 170/605 (28.10%), Postives = 285/605 (47.11%), Query Frame = 0 

Query: 123 EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPW 182
           E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +  
Sbjct: 391 EKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPGKMQAMNDEINQGLKSGIIRESKAIN 450

Query: 183 GAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYH 242
             PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH
Sbjct: 451 ACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYH 510

Query: 243 QLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMN------------------ 302
            +R++  D  K AFR   G +E++VM +G++ APA F   +N                  
Sbjct: 511 LIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDI 570

Query: 303 --------------------------------------RVSFLGHVVSKAGVSVDPAKIE 362
                                                 +V F+G+ +S+ G +     I+
Sbjct: 571 LIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENID 630

Query: 363 AVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQT 422
            V  W +P    E+R FLG   Y R+F+   S++  PL  L +K   + W+     + + 
Sbjct: 631 KVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIEN 690

Query: 423 LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK-------------------N 482
           +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+                     N
Sbjct: 691 IKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLN 750

Query: 483 YPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELV 542
           Y   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   +
Sbjct: 751 YSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFL 810

Query: 543 KDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQ 602
           +D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q
Sbjct: 811 QDFNFEINYRPGSANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQ 870

Query: 603 LTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERR--LCVPSDSAV 647
           +++    + +++   +ND  L+    L    +  E ++    GLL   +  + +P+D+ +
Sbjct: 871 ISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQL 930

[Close]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1253.0 bits (3241), Expect = 0.0e+00
Identity = 645/716 (90.08%), Postives = 646/716 (90.22%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 681  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 740

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 741  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 800

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 801  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 860

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 861  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 920

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 921  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 980

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 981  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 1040

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 1041 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 1100

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 1101 QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 1160

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 1161 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1220

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 1221 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1280

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH
Sbjct: 1281 RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 1340

[Close]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 1241.9 bits (3212), Expect = 0.0e+00
Identity = 638/716 (89.11%), Postives = 640/716 (89.39%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 461  MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 520

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLS EPVVRDYPDV
Sbjct: 521  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDV 580

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 581  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 640

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 641  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 700

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 701  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 760

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 761  DILIYSKTEVEHEEHLRMVLQTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAK 820

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 821  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 880

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 881  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 940

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 941  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 1000

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 1001 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1060

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAE GQ  EFSLSSDGGLLFERRLCVPSDSA+KTELLSEAH
Sbjct: 1061 RQRIIDAQSNDPYLVEKRGLAEVGQAVEFSLSSDGGLLFERRLCVPSDSAIKTELLSEAH 1120

[Close]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match: A0A5A7T0Y9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G00570 PE=4 SV=1)

HSP 1 Score: 1235.3 bits (3195), Expect = 0.0e+00
Identity = 631/693 (91.05%), Postives = 635/693 (91.63%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHV+EVTL+VLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 314  MLSKEKVKACQIEIAGHVVEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 373

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDV
Sbjct: 374  MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDV 433

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEP TVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 434  FPEELPGLPPHREVEFAIELEPDTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 493

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLP IDDLFDQLQ ATVFSKIDLRSG
Sbjct: 494  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPWIDDLFDQLQEATVFSKIDLRSG 553

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKD DVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 554  YHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 613

Query: 301  ------------------VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLA 360
                              VSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE RSFLGLA
Sbjct: 614  DILIYSKTEAEHEEHLRIVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEFRSFLGLA 673

Query: 361  GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFV 420
            GYYRRFVENFS IATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPVLTVPDGSGSFV
Sbjct: 674  GYYRRFVENFSHIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFV 733

Query: 421  IYSDASKKGLGCVLMQQGK--------------NYPTHDLELAAVVFALKIWRHYLYGEK 480
            IYSDASKKGLGCVLMQQGK              NYPTHDLELAAVVFALKIWRHYLYGEK
Sbjct: 734  IYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEK 793

Query: 481  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA 540
            IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA
Sbjct: 794  IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA 853

Query: 541  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA 600
            LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Sbjct: 854  LITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA 913

Query: 601  GQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 647
            GQ  EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW
Sbjct: 914  GQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWW 973

[Close]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1234.6 bits (3193), Expect = 0.0e+00
Identity = 633/716 (88.41%), Postives = 640/716 (89.39%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVK CQIEI+GHVIEVTL+VLDMLDFDVILGMDWLAA+HASIDCSRKEVTFNPPS
Sbjct: 427  MLSKEKVKTCQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAAHHASIDCSRKEVTFNPPS 486

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
             ASFKFKGGGS+SLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV
Sbjct: 487  RASFKFKGGGSRSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 546

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 547  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 606

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 607  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 666

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR               
Sbjct: 667  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFID 726

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 727  DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 786

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 787  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 846

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 847  QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 906

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 907  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 966

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL
Sbjct: 967  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 1026

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQ  EFSLSSDGGLLFERRLCVPSDS VKTELLSEAH
Sbjct: 1027 RQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAH 1086

[Close]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match: A0A5A7TSQ8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold157G00170 PE=4 SV=1)

HSP 1 Score: 1234.2 bits (3192), Expect = 0.0e+00
Identity = 636/716 (88.83%), Postives = 639/716 (89.25%), Query Frame = 0 

Query: 1    MLSKEKVKACQIEISGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 60
            MLSKEKVKACQIEI+GHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS
Sbjct: 2132 MLSKEKVKACQIEIAGHVIEVTLIVLDMLDFDVILGMDWLAANHASIDCSRKEVTFNPPS 2191

Query: 61   MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDV 120
            MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGIL SVVDTREADVSLSSEPVVRDYPDV
Sbjct: 2192 MASFKFKGGGSKSLPQVISAIRASKLLSQGTWGILGSVVDTREADVSLSSEPVVRDYPDV 2251

Query: 121  FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 180
            FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS
Sbjct: 2252 FPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVS 2311

Query: 181  PWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 240
            PWGAPVLFVKKKDGSMRLCIDYRELNK TVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG
Sbjct: 2312 PWGAPVLFVKKKDGSMRLCIDYRELNKETVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG 2371

Query: 241  YHQLRIKDEDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNR--------------- 300
            YHQLRIKDEDVPKTAF SRYGHYEFIVMSFGLTNAPAVFM+LMNR               
Sbjct: 2372 YHQLRIKDEDVPKTAFLSRYGHYEFIVMSFGLTNAPAVFMNLMNRVFREFLDTFVIVFID 2431

Query: 301  -----------------------------------------VSFLGHVVSKAGVSVDPAK 360
                                                     VSFLGHVVSKAGVSVDPAK
Sbjct: 2432 DILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAK 2491

Query: 361  IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 420
            IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF
Sbjct: 2492 IEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSF 2551

Query: 421  QTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK--------------NYPT 480
            Q LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK              NYPT
Sbjct: 2552 QNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 2611

Query: 481  HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 540
            HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI
Sbjct: 2612 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEI 2671

Query: 541  LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTL 600
            LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTL
Sbjct: 2672 LYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERVEIAVSVGAVTMQLAQLTVQPTL 2731

Query: 601  RQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 647
            RQRIIDAQSNDPYLVEKRGLAEAGQT EFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH
Sbjct: 2732 RQRIIDAQSNDPYLVEKRGLAEAGQTDEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAH 2791

[Close]
BLAST of Cmc06g0173631 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-21
Identity = 48/105 (45.71%), Postives = 70/105 (66.67%), Query Frame = 0 

Query: 285 RVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 344
           ++++LG  H++S  GVS DPAK+EA+ GW  P   +E+R FLGL GYYRRFV+N+ +I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 345 PLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFV 388
           PLT+L +K +   W++    +F+ LK  + T PVL +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:
BLAST of Cmc06g0173631 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01613.10.0e+0090.08pol protein [Cucumis melo var. makuwa][more]
KAA0037244.10.0e+0089.11reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0036553.10.0e+0091.05pol protein [Cucumis melo var. makuwa][more]
KAA0048687.10.0e+0088.41pol protein [Cucumis melo var. makuwa][more]
KAA0046094.10.0e+0088.83gag protease polyprotein [Cucumis melo var. makuwa][more]
BLAST of Cmc06g0173631 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P0CT411.7e-6928.10Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P0CT341.7e-6928.10Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT351.7e-6928.10Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT361.7e-6928.10Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
P0CT371.7e-6928.10Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
BLAST of Cmc06g0173631 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BPI10.0e+0090.08Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45... [more]
A0A5A7T1900.0e+0089.11Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37... [more]
A0A5A7T0Y90.0e+0091.05Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19... [more]
A0A5A7U3300.0e+0088.41Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43... [more]
A0A5A7TSQ80.0e+0088.83Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15... [more]
BLAST of Cmc06g0173631 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.8e-2145.71DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 303..393
e-value: 6.5E-31
score: 108.2
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 214..289
e-value: 3.0E-66
score: 224.8
NoneNo IPR availablePFAMPF08284RVP_2coord: 4..58
e-value: 2.3E-16
score: 59.8
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 135..274
e-value: 3.0E-66
score: 224.8
NoneNo IPR availableGENE3D1.10.340.70coord: 544..634
e-value: 2.8E-18
score: 67.9
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 288..492
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 19..255
coord: 288..492
NoneNo IPR availablePANTHERPTHR24559:SF383DNA/RNA POLYMERASES SUPERFAMILY PROTEINcoord: 19..255
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 387..488
e-value: 4.22506E-50
score: 168.055
NoneNo IPR availableCDDcd00303retropepsin_likecoord: 1..41
e-value: 1.26995E-8
score: 50.798
NoneNo IPR availableCDDcd01647RT_LTRcoord: 173..301
e-value: 1.89437E-60
score: 197.818
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 189..287
e-value: 1.9E-11
score: 43.9
IPR021109Aspartic peptidase domain superfamilyGENE3D2.40.70.10Acid Proteasescoord: 2..65
e-value: 2.0E-13
score: 52.2
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 579..635
e-value: 2.9E-17
score: 62.5
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 384..466
e-value: 1.6E-21
score: 76.5
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 113..472

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0173631.1Cmc06g0173631.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
cellular_component GO:0016020 membrane
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding