Cmc06g0173431 (gene) Melon (Charmono) v1.1

Overview
NameCmc06g0173431
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionDBD_Tnp_Mut domain-containing protein
LocationCMiso1.1chr06: 30193040 .. 30194496 (+)
RNA-Seq ExpressionCmc06g0173431
SyntenyCmc06g0173431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACAATCAATCGTACAATACCCCTGGCATCGTTGTATATGATACTTTGCCTCCATGCATTGCCACAAATGATGAAGATGTCAAAACAGAAGATGGTGACAGTATAGGTGAGGTAGACGAGCGATAGGGAGAAGTGAAAATTCCTGATCAATTCTTTAAGAATTTGAACATGGAGGTTATAGATTTCATGCCCGAAACAGGGGTTAGTGAAGAAGTTAATGCACCTGAAACGTTGTTGAAAGGTATGGTTTTTAAATCCAAAGTTGATCTAAAGAATGTTGTAAAGAGCTATTCCATTCTTCTTCATCAACATATTGATGCTGTGGAATCCAACAAGAAAGTATGGGCAGTGAAGTGTAAAAAAAATACAACAAATATTGCACTTGGAGACTTTGTGCTTGCTGCCTTAAAAACATGGGAGATTTGAGATTACGCAATATGTGGCCCACGTTCTTGTGTTTATTCAAGGTTGAGTGAAGATCATCAAAATTGAAATCTAATTTGATTGTTGTGGAAGTTTCTAGTGTAAGATACGACCCTTCTGTCGCCGTTAAAACCCTGCAAAAAAATGATATTTGATGAAGTATGAATATGTATCGGACCATTGGAAGACATGTCATGAGAAACATAAGTCAACTAAAATTGTTTTTGGATCAGATTGGGAGGAATCGTATATTTATTGCCTAATTGGACTCATATTTTGAAATTAGTTGATTATGAATCAATAGTATTGGCATGGAAGTTCCATGAAGATGTATGATCCAACAACGAAGCCATCCTCCACAATGTATTTTGACCATTTGACCAACAATAGAAGGATTCCAACATTGCAGATCTCTGCTTCAAATTGATGAATCCTACTTAATTATATTGGACAAAAAATATAATGGCAAATAATTAATAGTTTCTTTTGTTGATACAAATAGTCATATATACCCTATTGCATATGCAGTTGTGCCTGAAGAAAGTGTTGAAATATGGAGTGGTTTTTATATACTACATATGACATCATGTTGTATGCAAGAAGAAGAGGATATGTCTAATACCATATCGACATAAAGGCACATTATCAGCTATAAGGGACCGACCAAATAGATGGGAAAATGTGCACCATCATTCCAACACAAAGGACAAAGATAAGACATTAAAAAGCTTAATGTATCGCACCGATTCCGAGTACATAAATATAAGGAGTATATAGTTGAGCTTAAAATAGAAAATAAAGAGTGTGTGACTTTCTTCATTTCACTGGACTCTGAATTTTGCACAATGGATACAATCATCACATGATGGTAGTCGTCGATATGGATGGCTGACAATAAAACGCGGTTGAATGTAGAGTGAGACGACTACCAATAACTGCATTAGTTCAAGCAACCTTTTTTCGAAGTGCAATGTACTTTACCATATGATGTGAAAAAGCACAAACTAAAATTCAAGCAGAGAGCAATTTACTG

mRNA sequence

ACACAATCAATCGTACAATACCCCTGGCATCGTTGTATATGATACTTTGCCTCCATGCATTGCCACAAATGATGAAGATGTCAAAACAGAAGATGGTGACAGTATAGGTGAGGTAGACGAGCGATAGGGAGAAGTGAAAATTCCTGATCAATTCTTTAAGAATTTGAACATGGAGGTTATAGATTTCATGCCCGAAACAGGGGTTAGTGAAGAAGTTAATGCACCTGAAACGTTGTTGAAAGGTATGGTTTTTAAATCCAAAGTTGATCTAAAGAATGTTGTAAAGAGCTATTCCATTCTTCTTCATCAACATATTGATGCTGTGGAATCCAACAAGAAAGTATGGGCAGTGAAGTGTAAAAAAAATACAACAAATATTGCACTTGGAGACTTTGTGCTTGCTGCCTTAAAAACATGGGAGATTTGAGATTACGCAATATGTGGCCCACGTTCTTGTGTTTATTCAAGGTTGAGTGAAGATCATCAAAATTGAAATCTAATTTGATTGTTGTGGAAGTTTCTAGTGTAAGATACGACCCTTCTGTCGCCGTTAAAACCCTGCAAAAAAATGATATTTGATGAAGTATGAATATGTATCGGACCATTGGAAGACATGTCATGAGAAACATAAGTCAACTAAAATTGTTTTTGGATCAGATTGGGAGGAATCGTATATTTATTGCCTAATTGGACTCATATTTTGAAATTAGTTGATTATGAATCAATAGTATTGGCATGGAAGTTCCATGAAGATGTATGATCCAACAACGAAGCCATCCTCCACAATGTATTTTGACCATTTGACCAACAATAGAAGGATTCCAACATTGCAGATCTCTGCTTCAAATTGATGAATCCTACTTAATTATATTGGACAAAAAATATAATGGCAAATAATTAATAGTTTCTTTTGTTGATACAAATAGTCATATATACCCTATTGCATATGCAGTTGTGCCTGAAGAAAGTGTTGAAATATGGAGTGGTTTTTATATACTACATATGACATCATGTTGTATGCAAGAAGAAGAGGATATGTCTAATACCATATCGACATAAAGGCACATTATCAGCTATAAGGGACCGACCAAATAGATGGGAAAATGTGCACCATCATTCCAACACAAAGGACAAAGATAAGACATTAAAAAGCTTAATGTATCGCACCGATTCCGAGTACATAAATATAAGGAGTATATAGTTGAGCTTAAAATAGAAAATAAAGAGTGTGTGACTTTCTTCATTTCACTGGACTCTGAATTTTGCACAATGGATACAATCATCACATGATGGTAGTCGTCGATATGGATGGCTGACAATAAAACGCGGTTGAATGTAGAGTGAGACGACTACCAATAACTGCATTAGTTCAAGCAACCTTTTTTCGAAGTGCAATGTACTTTACCATATGATGTGAAAAAGCACAAACTAAAATTCAAGCAGAGAGCAATTTACTG

Coding sequence (CDS)

ATGGAGGTTATAGATTTCATGCCCGAAACAGGGGTTAGTGAAGAAGTTAATGCACCTGAAACGTTGTTGAAAGGTATGGTTTTTAAATCCAAAGTTGATCTAAAGAATGTTGTAAAGAGCTATTCCATTCTTCTTCATCAACATATTGATGCTGTGGAATCCAACAAGAAAGTATGGGCAGTGAAGTGTAAAAAAAATACAACAAATATTGCACTTGGAGACTTTGTGCTTGCTGCCTTAAAAACATGGGAGATTTGA

Protein sequence

MEVIDFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCKKNTTNIALGDFVLAALKTWEI
Homology
BLAST of Cmc06g0173431 vs. NCBI nr
Match: KAA0033975.1 (uncharacterized protein E6C27_scaffold400G00360 [Cucumis melo var. makuwa] >TYK02571.1 uncharacterized protein E5676_scaffold925G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 9.1e-37
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 4   IDFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC 63
           IDFMPE GVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC
Sbjct: 41  IDFMPEKGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC 100

Query: 64  KKNTTNIALGDFVLAALKTWEI 86
           KKNTTNIALGDFVLAALKTWEI
Sbjct: 101 KKNTTNIALGDFVLAALKTWEI 122

BLAST of Cmc06g0173431 vs. NCBI nr
Match: XP_038877923.1 (uncharacterized protein LOC120070133 [Benincasa hispida])

HSP 1 Score: 57.8 bits (138), Expect = 5.4e-05
Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 0

Query: 8   PETGVSEEVN-APETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCKKN 67
           P++   E+ N   ++LLKGM+F SK+DLKNVV++YSI+ HQ+ + +E  K  W V+  ++
Sbjct: 182 PDSTTGEDSNMGSDSLLKGMIFNSKLDLKNVVENYSIIRHQNFEVIELKKTTWDVRLSQD 241

BLAST of Cmc06g0173431 vs. NCBI nr
Match: RVW52006.1 (hypothetical protein CK203_068088 [Vitis vinifera])

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-05
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 5   DFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCK 64
           D +  TG+    N  + L KG+ F+SKVDL+  VK YSI  +QH+  +ES   +WAVKCK
Sbjct: 185 DLIARTGL---WNESDELFKGLRFESKVDLQYAVKRYSICRNQHLIVIESEPDIWAVKCK 242

Query: 65  K 66
           K
Sbjct: 245 K 242

BLAST of Cmc06g0173431 vs. NCBI nr
Match: RVX19406.1 (hypothetical protein CK203_008540 [Vitis vinifera])

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-05
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 5   DFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCK 64
           D +  TG+    N  + L KG+ F+SKVDL+  VK YSI  +QH+  +ES   +WAVKCK
Sbjct: 185 DLIARTGL---WNESDELFKGLRFESKVDLQYAVKRYSICRNQHLIVIESKPDIWAVKCK 242

Query: 65  K 66
           K
Sbjct: 245 K 242

BLAST of Cmc06g0173431 vs. NCBI nr
Match: XP_010647557.1 (PREDICTED: uncharacterized protein LOC104878656, partial [Vitis vinifera])

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0

Query: 17  NAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCKK 66
           N  + L KG+ F+SKVDL+  VK YSI  +QH+  +ES   +WAVKCKK
Sbjct: 194 NESDELFKGLRFESKVDLQYAVKRYSICRNQHLIVIESEPDIWAVKCKK 242

BLAST of Cmc06g0173431 vs. ExPASy TrEMBL
Match: A0A5D3BS46 (DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00230 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-37
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0

Query: 4   IDFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC 63
           IDFMPE GVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC
Sbjct: 41  IDFMPEKGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKC 100

Query: 64  KKNTTNIALGDFVLAALKTWEI 86
           KKNTTNIALGDFVLAALKTWEI
Sbjct: 101 KKNTTNIALGDFVLAALKTWEI 122

BLAST of Cmc06g0173431 vs. ExPASy TrEMBL
Match: A0A438KDW5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 5   DFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCK 64
           D +  TG+    N  + L KG+ F+SKVDL+  VK YSI  +QH+  +ES   +WAVKCK
Sbjct: 185 DLIARTGL---WNESDELFKGLRFESKVDLQYAVKRYSICRNQHLIVIESKPDIWAVKCK 242

Query: 65  K 66
           K
Sbjct: 245 K 242

BLAST of Cmc06g0173431 vs. ExPASy TrEMBL
Match: A0A438EWG2 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05
Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 5   DFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCK 64
           D +  TG+    N  + L KG+ F+SKVDL+  VK YSI  +QH+  +ES   +WAVKCK
Sbjct: 185 DLIARTGL---WNESDELFKGLRFESKVDLQYAVKRYSICRNQHLIVIESEPDIWAVKCK 242

Query: 65  K 66
           K
Sbjct: 245 K 242

BLAST of Cmc06g0173431 vs. ExPASy TrEMBL
Match: A0A438IGJ8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_039150 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 7.6e-05
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0

Query: 17  NAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCKK 66
           N  + L KG+ FKSKVDL+ VVK YSI  +QH+  +E    +WA+KCKK
Sbjct: 136 NESDELFKGLRFKSKVDLQYVVKRYSICRNQHLIVIEFEPDMWAIKCKK 184

BLAST of Cmc06g0173431 vs. ExPASy TrEMBL
Match: A0A438ED31 (Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760 GN=MAIL3_154 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.9e-05
Identity = 30/61 (49.18%), Postives = 38/61 (62.30%), Query Frame = 0

Query: 5   DFMPETGVSEEVNAPETLLKGMVFKSKVDLKNVVKSYSILLHQHIDAVESNKKVWAVKCK 64
           D    TG+  E N    L KG+ F+SKVDL+ VVK YSI  +QH+  +ES   +W VKCK
Sbjct: 99  DLTTSTGLWNESN---ELFKGLRFESKVDLQYVVKRYSIYRNQHLIVIESELDMWPVKCK 156

Query: 65  K 66
           K
Sbjct: 159 K 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033975.19.1e-3798.78uncharacterized protein E6C27_scaffold400G00360 [Cucumis melo var. makuwa] >TYK0... [more]
XP_038877923.15.4e-0543.33uncharacterized protein LOC120070133 [Benincasa hispida][more]
RVW52006.19.2e-0547.54hypothetical protein CK203_068088 [Vitis vinifera][more]
RVX19406.19.2e-0547.54hypothetical protein CK203_008540 [Vitis vinifera][more]
XP_010647557.11.2e-0453.06PREDICTED: uncharacterized protein LOC104878656, partial [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BS464.4e-3798.78DBD_Tnp_Mut domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A438KDW54.5e-0547.54SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_008540 P... [more]
A0A438EWG24.5e-0547.54SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_068088 P... [more]
A0A438IGJ87.6e-0553.06Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_039150 PE=4 SV=1[more]
A0A438ED319.9e-0549.18Serine/threonine-protein phosphatase 7 long form-like OS=Vitis vinifera OX=29760... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004332Transposase, MuDR, plantPFAMPF03108DBD_Tnp_Mutcoord: 22..66
e-value: 3.6E-9
score: 36.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc06g0173431.1Cmc06g0173431.1mRNA