Cmc06g0171181 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0171181
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase
Location	CMiso1.1chr06: 26961730 .. 26962671 (-)
RNA-Seq Expression	Cmc06g0171181
Synteny	Cmc06g0171181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAGACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTTAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

mRNA sequence

ATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAGACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTTAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

Coding sequence (CDS)

ATGAATATGCATAAAGAACAAAAGAAAATTGATGAAGGCATTCTATTCCTCGCATGTAGTGTTCAAGACAATGTTGTAGAGCCTACATGGTATCTTGATAGTGGTTGTAGCAACCACATGACAGGAAATAGAAGTATATTTGTTACTTTGGATGAATCTTTCCAAAGTGAAGTGAAGACTGGTGATAATACCAGACTACAAGTCAAAGGCCAAGGTGATATTCTTGTGAAGACAAAGAAAGGGACAAAACGAGTTACAAATGTGTTCTATGTTCCAGGTCTAAAGCATAATCTTTTGAGTATTGGCCAACTGCTTCAACGAGGTTTAAAAGTTTCATTTGAAGGTGACATATGTGCAATCAAAGATCAGGCCGGTGTTCTTATTGCCAAGGTAAAAATGACTGCTAATAAGATGTTTCCTCTTAACTTTACATATGGTCAAATATCTTGCTTTAGCAGCATATTGAAGGATCCATCCTGGCTTTGGCATTTTAGATATGGTCACTTAAACTTCAAATCACTATCTTATTTGTGCAAAAATCATATGGTGAGAGGTATACAAAATATCAACCATGAGACAAATATTTGTGAAGTGTGTATTCTTGCAAAACATCATCGAGATTCATTTCCAACTGGGAAAGCTTGGAGAGCCTCTAAACCTCTCGAGTTGATTCATACAGATTTGTGTGGTCCTATGCGAACAACAACAAATGGAGGTAATCGATATTTCATAACCTTCATCGATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTGAAAGAAAAGAGTGAAGCACTTGTATGTTTTAAATCCTTCAAAGCTTTTACTGAAAATCAAAGTGGTTACAAGATAAAAACTTTGAGATCTGACCGTGGTGGAGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGAATTCATCATCAAATGACAGCTTGA

Protein sequence

MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTA

Homology

[Close]

BLAST of Cmc06g0171181 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 656.8 bits (1693), Expect = 9.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 656.8 bits (1693), Expect = 9.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. NCBI nr
Match: TYK30104.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 656.8 bits (1693), Expect = 9.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 656.8 bits (1693), Expect = 9.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 656.8 bits (1693), Expect = 9.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-39
Identity = 98/289 (33.91%), Postives = 146/289 (50.52%), Query Frame = 0


Query: 27  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKG-TKRV 86
           E  W +D+  S+H T  R +F          VK G+ +  ++ G GDI +KT  G T  +
Sbjct: 291 ESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVL 350

Query: 87  TNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTY 146
            +V +VP L+ NL+S   L + G +  F      +    G L+    +    ++  N   
Sbjct: 351 KDVRHVPDLRMNLISGIALDRDGYESYFANQKWRL--TKGSLVIAKGVARGTLYRTNAEI 410

Query: 147 GQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKHH 206
            Q    ++  +    LWH R GH++ K L  L K  ++   +        C+ C+  K H
Sbjct: 411 CQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTT--VKPCDYCLFGKQH 470

Query: 207 RDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEA 266
           R SF T    R    L+L+++D+CGPM   + GGN+YF+TFIDD SRKLW+Y LK K + 
Sbjct: 471 RVSFQTSSE-RKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQV 530

Query: 267 LVCFKSFKAFTENQSGYKIKTLRSDRGGEYIA--FGNFFKEQGIHHQMT 313
              F+ F A  E ++G K+K LRSD GGEY +  F  +    GI H+ T
Sbjct: 531 FQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKT 574

[Close]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 83/286 (29.02%), Postives = 146/286 (51.05%), Query Frame = 0


Query: 30  WYLDSGCSNHMTGN-RSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNV 89
           W LDSG ++H+T +  ++ +    +   +V   D + + +   G   + TK     + N+
Sbjct: 331 WLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNI 390

Query: 90  FYVPGLKHNLLSIGQLLQ-RGLKVSFEGDICAIKD-QAGVLIAKVKMTANKMFPLNFTYG 149
            YVP +  NL+S+ +L    G+ V F      +KD   GV + + K T ++++       
Sbjct: 391 LYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGK-TKDELYEWPIASS 450

Query: 150 Q-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKH 209
           Q +S F+S   K     WH R GH     L+ +  N+ +  + N +H+   C  C++ K 
Sbjct: 451 QPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSL-SVLNPSHKFLSCSDCLINKS 510

Query: 210 HRDSFPTGKAWRASKPLELIHTDL-CGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKS 269
           ++  F +     +++PLE I++D+   P+ +  N   RY++ F+D F+R  W+Y LK+KS
Sbjct: 511 NKVPF-SQSTINSTRPLEYIYSDVWSSPILSHDN--YRYYVIFVDHFTRYTWLYPLKQKS 570

Query: 270 EALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHH 310
           +    F +FK   EN+   +I T  SD GGE++A   +F + GI H
Sbjct: 571 QVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISH 611

[Close]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 84/286 (29.37%), Postives = 143/286 (50.00%), Query Frame = 0


Query: 30  WYLDSGCSNHMTGN-RSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNV 89
           W LDSG ++H+T +  ++      +   +V   D + + +   G   + T   +  +  V
Sbjct: 310 WLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKV 369

Query: 90  FYVPGLKHNLLSIGQLLQRG-LKVSFEGDICAIKD-QAGVLIAKVKMTANKMFPLNFTYG 149
            YVP +  NL+S+ +L     + V F      +KD   GV + + K T ++++       
Sbjct: 370 LYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGK-TKDELYEWPIASS 429

Query: 150 Q-ISCFSS-ILKDPSWLWHFRYGHLNFKSLSYLCKNHMVRGIQNINHETNICEVCILAKH 209
           Q +S F+S   K     WH R GH +   L+ +  NH +  + N +H+   C  C + K 
Sbjct: 430 QAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSL-PVLNPSHKLLSCSDCFINKS 489

Query: 210 HRDSFPTGKAWRASKPLELIHTDL-CGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKS 269
           H+  F +     +SKPLE I++D+   P+ +  N   RY++ F+D F+R  W+Y LK+KS
Sbjct: 490 HKVPF-SNSTITSSKPLEYIYSDVWSSPILSIDN--YRYYVIFVDHFTRYTWLYPLKQKS 549

Query: 270 EALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHH 310
           +    F  FK+  EN+   +I TL SD GGE++   ++  + GI H
Sbjct: 550 QVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISH 590

[Close]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-26
Identity = 88/332 (26.51%), Postives = 151/332 (45.48%), Query Frame = 0


Query: 2   NMHKEQKK-----IDEGILFLACSVQDNVVEPT--WYLDSGCSNHMTGNRSIFVTLDESF 61
           N +KE +K        GI F+   V +  V     + LDSG S+H+  + S++       
Sbjct: 254 NKNKENEKQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYT------ 313

Query: 62  QSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTN--------VFYVPGLKHNLLSIGQLLQ 121
              V+     ++ V  QG+ +  TK+G  R+ N        V +      NL+S+ +L +
Sbjct: 314 -DSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVLFCKEAAGNLMSVKRLQE 373

Query: 122 RGLKVSFEGDICAIKDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRY 181
            G+ + F+     I  + G+++ K     N +  +NF   Q    ++  K+   LWH R+
Sbjct: 374 AGMSIEFDKSGVTI-SKNGLMVVKNSGMLNNVPVINF---QAYSINAKHKNNFRLWHERF 433

Query: 182 GHLNFKSLSYLCKNHMVRG---IQNINHETNICEVCILAKHHRDSFPTGK-AWRASKPLE 241
           GH++   L  + + +M      + N+     ICE C+  K  R  F   K      +PL 
Sbjct: 434 GHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKRPLF 493

Query: 242 LIHTDLCGPMRTTTNGGNRYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGY 301
           ++H+D+CGP+   T     YF+ F+D F+     Y +K KS+    F+ F A +E     
Sbjct: 494 VVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAHFNL 553

Query: 302 KIKTLRSDRGGEYIA--FGNFFKEQGIHHQMT 313
           K+  L  D G EY++     F  ++GI + +T
Sbjct: 554 KVVYLYIDNGREYLSNEMRQFCVKKGISYHLT 574

[Close]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot
Match: P25601 (Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5B PE=5 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04
Identity = 24/72 (33.33%), Postives = 40/72 (55.56%), Query Frame = 0


Query: 30  WYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKRVTNVF 89
           W  D+GC++HM  +RSIF +   S + +   G    + + G G + +    GT ++ +V 
Sbjct: 79  WIFDTGCTSHMCHDRSIFSSFTRSSRKDFVRGVGGSIPIMGSGTVNI----GTVQLHDVS 138

Query: 90  YVPGLKHNLLSI 102
           YVP L  NL+S+
Sbjct: 139 YVPDLPVNLISV 146

[Close]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL
Match: A0A5A7UZJ8 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
           MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 310 MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 369

Query: 61  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
           GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 370 GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 429

Query: 121 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
           KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 430 KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 489

Query: 181 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
           HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 490 HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 549

Query: 241 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
           RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 550 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 609

Query: 301 FFKEQGIHHQMTA 314
           FFKEQGIHHQMTA
Sbjct: 610 FFKEQGIHHQMTA 622

[Close]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 4.7e-185
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1    MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 60
            MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT
Sbjct: 775  MNMHKEQKKIDEGILFLACSVQDNVVEPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVKT 834

Query: 61   GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 120
            GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI
Sbjct: 835  GDNTRLQVKGQGDILVKTKKGTKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDICAI 894

Query: 121  KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 180
            KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN
Sbjct: 895  KDQAGVLIAKVKMTANKMFPLNFTYGQISCFSSILKDPSWLWHFRYGHLNFKSLSYLCKN 954

Query: 181  HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 240
            HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN
Sbjct: 955  HMVRGIQNINHETNICEVCILAKHHRDSFPTGKAWRASKPLELIHTDLCGPMRTTTNGGN 1014

Query: 241  RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 300
            RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN
Sbjct: 1015 RYFITFIDDFSRKLWIYFLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGN 1074

Query: 301  FFKEQGIHHQMTA 314
            FFKEQGIHHQMTA
Sbjct: 1075 FFKEQGIHHQMTA 1087

[Close]

BLAST of Cmc06g0171181 vs. TAIR 10
Match: AT3G20980.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 72.4 bits (176), Expect = 7.3e-13
Identity = 48/132 (36.36%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 27  EPTWYLDSGCSNHMTGNRSIFVTLDESFQSEVK--TGD---NTRLQVKGQGDILVKTKKG 86
           E  W + S  SNHMT +   F TLD S + +VK  +GD    T   V+G GD+   T +G
Sbjct: 266 ENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSETTVAMVEGIGDVTFITNEG 325

Query: 87  TKRVTNVFYVPGLKHNLLSIGQLLQRGLKVSFEGDI-CAIKDQAGVLIAKVKMTANKMFP 146
            K + NV YVPG++ N LS+ QL + G +VS E    C + D+    +    M   + F 
Sbjct: 326 NKTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVWDRTTGKMFGKNMWEKRGFC 385

Query: 147 LNFTY--GQISC 151
           L F+   G   C
Sbjct: 386 LRFSVIEGNFQC 397

[Close]

BLAST of Cmc06g0171181 vs. TAIR 10
Match: AT3G21000.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-10
Identity = 31/84 (36.90%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 30  WYLDSGCSNHMTGNRSIFVTLDESFQSEVKTGDNTRLQVKGQGDILVKTKKGTKR-VTNV 89
           W +      +MT     F TLD +F++ V T D T L V+G+GD+ ++ K+G K+ + NV
Sbjct: 280 WIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKEGKKKTIRNV 339

Query: 90  FYVPGLKHNLLSIGQLLQRGLKVS 113
            +VPGL  N+LS G+++ +   +S
Sbjct: 340 IFVPGLNRNVLSFGKMVSKRYSIS 363

The following BLAST results are available for this feature:

BLAST of Cmc06g0171181 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	9.7e-185	100.00	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	9.7e-185	100.00	integrase [Cucumis melo var. makuwa]	[more]
TYK30104.1	9.7e-185	100.00	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	9.7e-185	100.00	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	9.7e-185	100.00	integrase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0171181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	4.4e-39	33.91	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	1.1e-26	29.02	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-26	29.37	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	2.5e-26	26.51	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25601	2.1e-04	33.33	Putative transposon Ty5-1 protein YCL075W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc06g0171181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	4.7e-185	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	4.7e-185	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	4.7e-185	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5A7UZJ8	4.7e-185	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4...	[more]
A0A5D3CXM6	4.7e-185	100.00	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]

BLAST of Cmc06g0171181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20980.1	7.3e-13	36.36	Gag-Pol-related retrotransposon family protein	[more]
AT3G21000.1	4.4e-10	36.90	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 149..204 e-value: 2.0E-14 score: 53.2
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 218..312 e-value: 2.4E-15 score: 56.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 216..313 score: 15.565201
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 213..313 e-value: 1.6E-21 score: 78.5
None	No IPR available	PANTHER	PTHR34676:SF9	SUBFAMILY NOT NAMED	coord: 27..207
None	No IPR available	PANTHER	PTHR34676	FAMILY NOT NAMED	coord: 27..207
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 214..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0171181.1	Cmc06g0171181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding