Cmc06g0170651 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0170651
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RAB GTPase 11C
Location	CMiso1.1chr06: 25980382 .. 25984100 (-)
RNA-Seq Expression	Cmc06g0170651
Synteny	Cmc06g0170651

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGAGGATAAAAGAAAAAAGAGGATGTTTAGGGAAATCAAGATTGTATGAGTTGGCGGTTGGTCGGAAAAGCCCATATCTAGAAGGGCAGTTTCGGCCTTAAAAGAAAATCATTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGATTCTATTCCTGAGGAGGAACAACAAAAACAAAGTTCTTCAATTTTCGGTTTCCAGATTTTGGAAACCTAAATCGGTAAACCAAATAAACGAAGAACCAGATTAAGAAAGAGAGAATACCGCCAAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTATCTCTCTCTCTCTTCCCTCCCTCTTCATTTCTCTCTCATTGTCTCTCATTGGGTATTTATATCTTTGTGGCGTTGTGTGTTTCTGTGCTTTGCATTCTCGATCTGTGTGTAAATCTGAATTTGGATTGGTTTTGGAACTCGAGTTTTTTTTTTAAAAAAAAAAGAACTATTTATTTGTTGTAATTCAAGAAATGATCTGTTTTCTCTTTCGGATCTGTGTTCTCAATTACTTGTTCTGGTTGTGTTTTCATTTTAATTTTGAGGAATGCGGGAACTTATTCGTTTCTTTACTGATCTAGATTTGGATGATGAATCGAGAAAATTGCCTGTAGATTTGATTAGGTATAACTTTTGATGGGAGTTGTTCAAATTCCGATCCAAGTATGAGTACGACATTTCATCCTAACTTTTAATGGAGATATATCTGCAGATCATAATTGGTTGTTTTATTGCCATTTAGTCTAGTCTTTAGTACCTTAGTGCCATACTTTAAAAATACGAATCTGAATTAATGACTCCTTTCCTGGAAATGCAATTATTATTTCAGTTTACCTTTATTTCATTCCTTCATTTCCATTTTGATTATGCAATTTGACTCTCTCAAAAAATCGAAAGCAATTCTGAAGAGGACAAGCATTTTACAAATACTTAGGAAAAATCAAGAAACATTTGCAAATCTAGCCGCAAACGTTGATTTACAATGCAATATGTGGTTGCTTAAATCTCAGTTTCTTGGTCTTTATTGATATCTGGGAAGTGTTATATGGTTAGTATCCTGCCACACATATACATGTTTTGATAATAGATGTTGGATCTTCTTAGATCGTCTTGTCTTGAAATGGCTATGTTATATTAGTGGCACATTTGTTGATCGAACAATGCCATAATCTAGATCTATACAGAATGAGGGAAACTTTTGTTATATCCGTTCTTATCCTGCTAAAGACGTTGGTTTTCATTTTCGTTCGACTCGTAAGCTGAGTTAATGTGGAATACAGTGGTGACTCCTTGCTAGATGACTGGAACTGTTTGGTTTTTCGGATATCTGTTTGTGAAATTTGATATATGACGTTTTCTTTTTTGCTCTCTCTGTAGACTTGAATTACAGGCACAAGTTTTCATTTTCTGATCTTTGTCTACGAACTTGGTCTTTGTTTTTTAAATTCAACAAAACGTTTTGGATATACAAAGAAAACAGCTTTCAATCATTTGTTTACTGCTTATATCACATTTTAGCCTTCAGGTGGGATTTGGGGGTTCATTTGATTAAGGGGGGATTCATTATATTTATTATTATGCTTTGATTATGAAAGTTATCAAGAAAAAGAAATGCTGCATTATCTTAGGTCGAGGGAAGGACTGTGAAAGCTCAAATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTACAGGGGTGCACTTGGAGCGCTTCTAGTGTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTTCTGCTGCTAATAACATCAAAGAAGGCAAAACCATTGTGGTTGGTGAATCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGAAGTTCAACAATTTTTGTAACTCTCTCTCTCTCTCTCTCTCTCTTTCTTATTTGTCATTTGCTTCTTCATTTCTTTCTAGTTACCAACTCTCTTCTGTTATTTGTTTGCTTTTGGATTATGTTGGTGTATAATTTACATATAATTTATATTTTACTTTAGATTTGTTATTATTATTATTATTATTATTATTGTTATTGTTATTGTTATTGTTATTTTCTTCATGTAGCCCCAGGGATCATTGAAATCTCTTGTCAGACACTAATGAGAGGTTCATTTCAGGGACTGTCTGTTTCTATGGAATCTCTATGTTGGAGAATCAAATTTGTGAATGTCTGGTGGAGCTTTTAGTTTTTTGATATCTGTGAGTATTTAACTTATATGCAATTTTTTTTTTGGGGGGGAATTTTAGTTTATGTTGGGAGTGATTTTGCTATAGAATACGTCGGTTTGGGTTTGATTTTACACTTCTAAATCCAATTTTTAATTTTGAATTACTAAAATCAGGTTTGTAATTTTGAACATTTCCAAAATTAATTGTGTTAACCTACTTCAGTCTTAACTAGTTAAACTAAATTTAGATGGACTTTTGAACAATATTGATTAGATCGAGTAAAGTTAGTGGATGAGGAAGAGAGGTTATTAATAAATAGAGGGGCCTTGCAGGTAGAGAGAGTGTGGCCTCAAGTAAGCATTGTTGAGAGGAAGATGCTATACATTTATTTCTTGATGCTTCATTAATTTTTCACAACATATTTACCATTTAAATTATAATGGATTTTCGTCGTAGTTTGTTGTTTATTATTTTTTAAAAAAAAAAAAAAAACCTTTTAAATTTCTTAGTTTTGCATAAAAATCATTAAGTTAATGTTGTTATTTATTTTTGTAAATGATTTAGTAAGAAGTTAAACATAAAGAGGCATCCTTTGACTTATTTACCCAATTGAAACCAAAGTAAAAACAACATTTTATTATTATACATTTGTTGAGATGTATTTTATTAGTAGAAGCCACCAGATTTTCTGAAACCATCCGGGGGTGTTGGGTTAATGACTTTAGATAGCAATAGAGATGTCACCTTGTAATGAAGGATATGGTAAGACGAAAGGTAAAAATTTAGGAACTAATCACAACACTTAAATATAGTTTGTTAAACTCTCTATGGAGATGGCCAAACATCGAGGGAGAGAATTCAATATGTAAATTTTCTTTGTCGTAAAAAATACTTTATTTCAATTGAGTTAAACACACACTTTGAAGGTATAGTTCATAATTTCACTTTTTAAATTCTAGCATATTATAAACTATAAAAATTTTAATACTCATCTCACGTGAGTTTTTTAATATTTTATGCATTAACATTAAGTATTTATTACTATTAATTTTAATTAACGTTTTAAATATAAACATGGTTAAAGTTCTAAATATAA

mRNA sequence

TTTGGAGGATAAAAGAAAAAAGAGGATGTTTAGGGAAATCAAGATTGTATGAGTTGGCGGTTGGTCGGAAAAGCCCATATCTAGAAGGGCAGTTTCGGCCTTAAAAGAAAATCATTTTGATTTGAAGTCGGCGGAGTCTCCATTTCGTCTTCATATTCAAAGTGATTCTATTCCTGAGGAGGAACAACAAAAACAAAGTTCTTCAATTTTCGGTTTCCAGATTTTGGAAACCTAAATCGGTAAACCAAATAAACGAAGAACCAGATTAAGAAAGAGAGAATACCGCCAAGATATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTCGAGGGAAGGACTGTGAAAGCTCAAATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTACAGGGGTGCACTTGGAGCGCTTCTAGTGTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTTCTGCTGCTAATAACATCAAAGAAGGCAAAACCATTGTGGTTGGTGAATCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGAAGTTCAACAATTTTTGGACTGTCTGTTTCTATGGAATCTCTATGTTGGAGAATCAAATTTGTGAATGTCTGGTGGAGCTTTTAGTTTTTTGATATCTGTGAGTATTTAACTTATATGCAATTTTTTTTTTGGGGGGGAATTTTAGTTTATGTTGGGAGTGATTTTGCTATAGAATACGTCGGTTTGGGTTTGATTTTACACTTCTAAATCCAATTTTTAATTTTGAATTACTAAAATCAGGTTTGTAATTTTGAACATTTCCAAAATTAATTGTGTTAACCTACTTCAGTCTTAACTAGTTAAACTAAATTTAGATGGACTTTTGAACAATATTGATTAGATCGAGTAAAGTTAGTGGATGAGGAAGAGAGGTTATTAATAAATAGAGGGGCCTTGCAGGTAGAGAGAGTGTGGCCTCAAGTAAGCATTGTTGAGAGGAAGATGCTATACATTTATTTCTTGATGCTTCATTAATTTTTCACAACATATTTACCATTTAAATTATAATGGATTTTCGTCGTAGTTTGTTGTTTATTATTTTTTAAAAAAAAAAAAAAAACCTTTTAAATTTCTTAGTTTTGCATAAAAATCATTAAGTTAATGTTGTTATTTATTTTTGTAAATGATTTAGTAAGAAGTTAAACATAAAGAGGCATCCTTTGACTTATTTACCCAATTGAAACCAAAGTAAAAACAACATTTTATTATTATACATTTGTTGAGATGTATTTTATTAGTAGAAGCCACCAGATTTTCTGAAACCATCCGGGGGTGTTGGGTTAATGACTTTAGATAGCAATAGAGATGTCACCTTGTAATGAAGGATATGGTAAGACGAAAGGTAAAAATTTAGGAACTAATCACAACACTTAAATATAGTTTGTTAAACTCTCTATGGAGATGGCCAAACATCGAGGGAGAGAATTCAATATGTAAATTTTCTTTGTCGTAAAAAATACTTTATTTCAATTGAGTTAAACACACACTTTGAAGGTATAGTTCATAATTTCACTTTTTAAATTCTAGCATATTATAAACTATAAAAATTTTAATACTCATCTCACGTGAGTTTTTTAATATTTTATGCATTAACATTAAGTATTTATTACTATTAATTTTAATTAACGTTTTAAATATAAACATGGTTAAAGTTCTAAATATAA

Coding sequence (CDS)

ATGGCCCGGAGACCTGACGATGACTATGATTATCTCTTCAAAGTTGTGCTTATCGGTGATTCCGGCGTTGGAAAATCCAACCTCCTTTCCCGATTCACTCGGAATGAGTTTTGTTTGGAGTCCAAGTCCACCATTGGCGTCGAATTCGCTACTCGTACTCTTCAGGTCGAGGGAAGGACTGTGAAAGCTCAAATATGGGACACGGCCGGTCAAGAGCGTTACAGAGCAATAACAAGTGCTTACTACAGGGGTGCACTTGGAGCGCTTCTAGTGTATGATGTAACAAAACCAATGACATTCGATAACGTAAGCCGTTGGTTGAAGGAACTTAGGGACCATGCCGATTCCAACATAGTAATCATGTTAATTGGAAACAAGACTGATCTGAAACACCTCCGAGCAGTGGCGACAGAGGATGCACAAAGCTATGCTGAGAAAGAAGGACTATCATTCATTGAAACGTCTGCTCTCGAAGCAACAAACGTGGAGAAGGCTTTCCAAACTATTCTTTCCGAGATATATCGGATAATCAGTAAAAAATCCCTTAATTCAGAGGAGCCTTCTGCTGCTAATAACATCAAAGAAGGCAAAACCATTGTGGTTGGTGAATCAGAGGCCAATACAAAGAAGGCTTGTTGCTCCTCTTCTTGA

Protein sequence

MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS

Homology

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BLAST of Cmc06g0170651 vs. NCBI nr
Match: XP_008452243.1 (PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ras-related protein RABA2a [Cucumis melo])

HSP 1 Score: 420.6 bits (1080), Expect = 8.0e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of Cmc06g0170651 vs. NCBI nr
Match: XP_004133721.1 (ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein RABA2a [Cucumis sativus] >KGN56262.1 hypothetical protein Csa_009772 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 1.8e-113
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP+AANNIKEGKTIVVGESEANTKKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

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BLAST of Cmc06g0170651 vs. NCBI nr
Match: XP_038905598.1 (ras-related protein RABA2a [Benincasa hispida])

HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 213/216 (98.61%), Postives = 215/216 (99.54%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP+AA NIKEGKTIVVGESEANTKKACCSSS
Sbjct: 181 SLNSEEPAAA-NIKEGKTIVVGESEANTKKACCSSS 215

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BLAST of Cmc06g0170651 vs. NCBI nr
Match: XP_023517501.1 (ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.7 bits (1049), Expect = 3.2e-110
Identity = 209/216 (96.76%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNV+RWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVNRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLS IETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSLIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNS+EP+AA NIKEGK+IVVGESEAN+KKACCSSS
Sbjct: 181 SLNSDEPAAAANIKEGKSIVVGESEANSKKACCSSS 216

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BLAST of Cmc06g0170651 vs. NCBI nr
Match: XP_022929370.1 (ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related protein RABA2a [Cucurbita pepo subsp. pepo] >KAG7015452.1 Ras-related protein RABA2a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 4.1e-110
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP +AA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 217

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BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot
Match: O04486 (Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 3.5e-104
Identity = 195/217 (89.86%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTI-VVGESEANTKKACCSSS 217
           S++S++ +A  NIKEG+TI V   SE+N KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

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BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 332.4 bits (851), Expect = 3.8e-90
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPSAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E +AAN+    +G TI V ++    K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 3.8e-90
Identity = 167/215 (77.67%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DLKHLRAV+ ED Q+ AEKEGLSF+ETSALEA N+EKAFQTIL+EIY IISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E S +N   +G TI V ++ AN +++CCS+
Sbjct: 181 ALAAQEAS-SNLPGQGTTINVADASANQRRSCCST 214

[Close]

BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.1e-89
Identity = 164/216 (75.93%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLRAV+ +D  + +EKEGLSF+ETSALEATN+EKAFQTIL+EIY I+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 181 SLNSEEPSAANNIK-EGKTIVVGESEANTKKACCSS 216
           +L ++E +A  ++  +G TI V ++  NTKK CCS+
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNTKKGCCST 216

[Close]

BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 328.6 bits (841), Expect = 5.5e-89
Identity = 166/215 (77.21%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E +A N   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL
Match: A0A1S3BTD1 (ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.9e-114
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS
Sbjct: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL
Match: A0A0A0L6P8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.7e-114
Identity = 215/216 (99.54%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP+AANNIKEGKTIVVGESEANTKKACCSSS
Sbjct: 181 SLNSEEPAAANNIKEGKTIVVGESEANTKKACCSSS 216

[Close]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL
Match: A0A6J1EU78 (ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.0e-110
Identity = 212/217 (97.70%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP +AA NIKEGKTIVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKTIVVGESEANSKKPCCSSS 217

[Close]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL
Match: A0A6J1C4Z3 (ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 208/216 (96.30%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYD TK MTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDTTKAMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSF+ETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFLETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNS EP+AA++IKEGKTIVVGESEANTKK+CCSSS
Sbjct: 181 SLNSNEPAAASSIKEGKTIVVGESEANTKKSCCSSS 216

[Close]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL
Match: A0A6J1J221 (ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.6e-110
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180

Query: 181 SLNSEEP-SAANNIKEGKTIVVGESEANTKKACCSSS 217
           SLNSEEP +AA NIKEGK IVVGESEAN+KK CCSSS
Sbjct: 181 SLNSEEPAAAAANIKEGKAIVVGESEANSKKPCCSSS 217

[Close]

BLAST of Cmc06g0170651 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 379.0 bits (972), Expect = 2.5e-105
Identity = 195/217 (89.86%), Postives = 206/217 (94.93%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MARRPD++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKP TF+NVSRWLKELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA NVEKAFQTILSE+YRIISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTI-VVGESEANTKKACCSSS 217
           S++S++ +A  NIKEG+TI V   SE+N KK CCSSS
Sbjct: 181 SISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS 217

[Close]

BLAST of Cmc06g0170651 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91
Identity = 168/217 (77.42%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           M  R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRT QVEG+T
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           +KAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED QS AEKEGLSF+ETSALEATNVEKAFQTIL EIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 181 SLNSEEPSAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E +AAN+    +G TI V ++    K+ACCSS
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS 217

[Close]

BLAST of Cmc06g0170651 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 328.6 bits (841), Expect = 3.9e-90
Identity = 166/215 (77.21%), Postives = 189/215 (87.91%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK+DL HLR+VA ED +S AEKEGLSF+ETSALEATN+EKAFQTILSEIY IISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 181 SLNSEEPSAANNIKEGKTIVVGESEANTKKACCSS 216
           +L ++E +A N   +G  I + +S A  +K CCS+
Sbjct: 181 ALAAQE-AAGNLPGQGTAINISDSSATNRKGCCST 214

[Close]

BLAST of Cmc06g0170651 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 326.6 bits (836), Expect = 1.5e-89
Identity = 165/217 (76.04%), Postives = 189/217 (87.10%), Query Frame = 0


Query: 1   MARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60
           MA R + DYDYLFK+VLIGDSGVGK+N+LSRFTRNEFCLESKSTIGVEFATRTLQVEG+T
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVI 120
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TFDNV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKK 180
           M+ GNK DL HLR+VA ED Q+ AE EGLSF+ETSALEATNVEKAFQT+L+EIY IISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 181 SLNSEEPSAANNI--KEGKTIVVGESEANTKKACCSS 216
           +L ++E +AAN+    +G TI V ++    K+ CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST 217

[Close]

BLAST of Cmc06g0170651 vs. TAIR 10
Match: AT5G60860.1 (RAB GTPase homolog A1F )

HSP 1 Score: 295.0 bits (754), Expect = 4.8e-80
Identity = 150/217 (69.12%), Postives = 182/217 (83.87%), Query Frame = 0


Query: 2   ARRPDDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTV 61
           A R DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF LESKSTIGVEFATR++ V+ + V
Sbjct: 3   AYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIV 62

Query: 62  KAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIM 121
           KAQIWDTAGQERYRAITSAYYRGA+GALLVYDVT+ +TF+NV RWLKELRDH D+NIVIM
Sbjct: 63  KAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIM 122

Query: 122 LIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKS 181
            +GNK DL+HLRAV+TEDA+++AE+E   F+ETSALE+ NVE AF  +LS+IYR++S+K+
Sbjct: 123 FVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKA 182

Query: 182 LNSEEPSAANNIKEGKTIVVGESE---ANTKKACCSS 216
           L+  +  AA  + +G+TI VG  +   A  K  CCS+
Sbjct: 183 LDIGDDPAA--LPKGQTINVGSKDDVSAVKKVGCCSN 217

The following BLAST results are available for this feature:

BLAST of Cmc06g0170651 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452243.1	8.0e-114	100.00	PREDICTED: ras-related protein RABA2a [Cucumis melo] >XP_008452244.1 PREDICTED: ...	[more]
XP_004133721.1	1.8e-113	99.54	ras-related protein RABA2a [Cucumis sativus] >XP_031739127.1 ras-related protein...	[more]
XP_038905598.1	2.9e-111	98.61	ras-related protein RABA2a [Benincasa hispida]	[more]
XP_023517501.1	3.2e-110	96.76	ras-related protein RABA2a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022929370.1	4.1e-110	97.70	ras-related protein RABA2a [Cucurbita moschata] >XP_023552907.1 ras-related prot...	[more]

BLAST of Cmc06g0170651 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04486	3.5e-104	89.86	Ras-related protein RABA2a OS=Arabidopsis thaliana OX=3702 GN=RABA2A PE=2 SV=1	[more]
Q96283	3.8e-90	77.42	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q39434	3.8e-90	77.67	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q40193	1.1e-89	75.93	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q9LNW1	5.5e-89	77.21	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]

BLAST of Cmc06g0170651 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BTD1	3.9e-114	100.00	ras-related protein RABA2a OS=Cucumis melo OX=3656 GN=LOC103493317 PE=4 SV=1	[more]
A0A0A0L6P8	8.7e-114	99.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110590 PE=4 SV=1	[more]
A0A6J1EU78	2.0e-110	97.70	ras-related protein RABA2a OS=Cucurbita moschata OX=3662 GN=LOC111435963 PE=4 SV...	[more]
A0A6J1C4Z3	4.5e-110	96.30	ras-related protein RABA2a OS=Momordica charantia OX=3673 GN=LOC111008523 PE=4 S...	[more]
A0A6J1J221	7.6e-110	97.24	ras-related protein RABA2a OS=Cucurbita maxima OX=3661 GN=LOC111482705 PE=4 SV=1	[more]

BLAST of Cmc06g0170651 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09630.1	2.5e-105	89.86	RAB GTPase 11C	[more]
AT3G46830.1	2.7e-91	77.42	RAB GTPase homolog A2C	[more]
AT1G07410.1	3.9e-90	77.21	RAB GTPase homolog A2B	[more]
AT5G59150.1	1.5e-89	76.04	RAB GTPase homolog A2D	[more]
AT5G60860.1	4.8e-80	69.12	RAB GTPase homolog A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 151..173 score: 43.68 coord: 54..76 score: 52.08 coord: 116..129 score: 50.58 coord: 36..52 score: 36.23 coord: 13..34 score: 55.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..176 e-value: 2.7E-112 score: 389.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..176 e-value: 5.6E-27 score: 105.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 18..215 e-value: 4.0E-6 score: 36.3
None	No IPR available	PANTHER	PTHR47979:SF18	RAS-RELATED PROTEIN YPTC6	coord: 1..216
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..216
None	No IPR available	PROSITE	PS51420	RHO	coord: 6..174 score: 9.164656
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..213 score: 36.733585
None	No IPR available	CDD	cd01868	Rab11_like	coord: 10..174 e-value: 1.28326E-129 score: 359.952
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 15..172 e-value: 7.2E-12 score: 32.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 14..174 e-value: 1.1E-61 score: 207.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..216 score: 17.221626
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..213 e-value: 4.3E-75 score: 253.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 8..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..170 e-value: 9.2E-41 score: 137.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0170651.1	Cmc06g0170651.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005768	endosome
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding