Cmc06g0170351 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0170351
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	zinc finger CCCH domain-containing protein 5
Location	CMiso1.1chr06: 25604929 .. 25611013 (-)
RNA-Seq Expression	Cmc06g0170351
Synteny	Cmc06g0170351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAAATTAGTTATTTTGGACAATTTTCTTATCTTCAACCAGAGACAACACTGATTTACACTTTTTTTTATCCAAGGGTGAAAATTCTTAGAAATAACACTCCCAAGTTTTCACTTTTAAAAACTAGGACACTTTTTAAAACTTCCTTATACTAGTTTTTCTCTTTAAATCGAGAGAAACCGAACCTAGAGGGAAATATACTCAGGCATGCAAAAAAAATCCATCTAGCTTTGGTTCTAGGTGATGGATGATCCATCCATTTGCAAGTACCATTAAACAAAATAACCTTTTTCCTCTCTCAATCTCTTTTGGTCTTGTTCACGTTTATTCATACAAATTTACCTTGAATGAGCGGCTAGAACTTGGTAGGAAGATCAATGTTTACCCTAACTTATTTCTCCACAGCACAAATCTGAATCCACCGTCACTCATTCATTAATTTCATTTGATGTTGTATAATTTTGCATGAATCAAAATTCACGATTCGGTAAGCTTGTATGTATAAATCCACCGAGATGTACCATAAGATCCAAACAAACAATCAATAAGTTAGAAAAGAAGTGAAGTATTTGAACGAGTTTTAATTTTGTGAGACCAAAACGTCACCGAAGCTATTTCCCACCCAAGAGTTCCCATTAATTGCACCAAAACAAAAGTGTTTCGAATTTTTTCTTCACCATCGACGCAGGAGGGTCGTCTCAACGGAGACTGCTGATAAATTGGAAGTTCCATCAACAAACACCCAATCAACACGACACCGCGATTGAATCCCTTCGAGGCGCCCTTTCGTTACTCTGCTTTGATTTAGAGCTCCATTTTGTGAGCCTAATGGAGGAACCTAAACTCATAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTAAGCCATGTTCGGTGGATAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATTAAACGGAAGCAATTAAGAAAAGAGTTGGCGCTAAAAAGGCTACAGGAAGAGGAGGCTCGGTTGAACGACCCTGAAGAGCAGAGGAGGGTTCAGTTGATGGAGTTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTTGAGGAGCGTGAAAGGGCGTGGATGGAAGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAAAGGAGAGCGCTGGAAGAAGAATCGACGCCGCGCCAGGTTTTTCTTTCCTTTCTTGTGATTTATTATCTGGTGACTTTGTACTAGAACACTACTCATATCCTGTTGATAGATTTCTAGTCAGATTTCAGTTTTATAATGCAGTATTACTGATTTAGTTTCTATCAATACATAAAAAAAAATCATTTGAATTTCTTATACGGGAAACTGTAATCGCTTTCTATTACTATTTCGTGGGTCACATATCTCTTTTTGTTTAAGCTGAGGAAAATTGCTCATTTCACCAGTTTGCAACCTTCTTTTGTAGGCTGAAAATGAAAATGAGTTTAATGAGGAAGATGGTTGGGAATACATAGAAGGGCCTGCAGAAATAATTTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGGGTGTTGAACCGGAGAAAAGCCTTGAGGTATTCTTTCTGCAACCAGGCCAGGCTATTGTTGTTTTCTAGATCATCATTGTTTATGTTAAAATTTCTTTTCCTGGAACATGTTGGAATCCAAATTCTTGTGATCATAGATATTTATATATATTCATATTCATGGTGTAGGATGCTCATAGACCTACATCAAATCCTCTTCCTCCACAATCTGAAGCTTTTACAGATTATAAGAATACTCCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGCATTTTTCCTTCTCTTCCTCTGTATATTTATTATCTGTACATACCTATTCCTTCTCCAGTAGTTTTATAGTTAATCAATTGTCATCTTAATAAATAACCTTTACTTTTTTTGTTTATTTATTATGACAGGATAAATCACATTGCCCGTTCCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTGCTTATCAAGAACATGTATAATGGTCCAGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTGTATCCTCAAAATATCTTTGAATCAATTATCTCTGAAATTGTTTTGAAAGGTCTCAGTCTCATTTAGGAGACACCTAAACTTTTACCTATATATATGCCTATTTAGGTATAATTTGTTTGCAAATTTCTATATAATTATTTTTATGGTTGGATTGGTGACCATTAATAATTAGAATTAGATTAACTTTTTCTGGAACAATTTCTGACTCGAGAATCCGCCAAACTCGATATAATGCTGTTACTTTTTTGGTCTTCACATGTTCATTTTTGAGTCTTAGGAAAGAGAACATGAACTTGAATTATCATCCTTTTTCTGGTGTTCTTGGGTTAATATATTGTTCCTTTATAAAGACATTTTGATTGAAGCTGTTAAAATTAAGAATAGATCTATCAGTTTATTGCAAACCTTGCATCCTAAATGGATCGACAAAATAATTGATGAAGCTTGGTTCTAGGCAGTTTGGCAACTGGAAAAATTTATCCTTAAAGTCAATCGCTTCCTTAGATGCCTAGTGCAACCATTACACTGAAATTCATCATGTTGTGATTGTTGGTGGCATTGATATCTAATATCCTCCATTTATTTTTATTTTGGATTTCTTGACCTACTTTATATCAGGGACTTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTCTTGCTCTTGAGTCCCTTTGGAGTTGATAATACGAAAACAAATTTTGTATCCTACTTGCATTATCTTTTTAACTATCACATGTATATTCTTTTACTTGCAAGATTGTTGTTAGTAATAGCATATTGCATTTTTCTTTTGCTACTCATCCCATTCTTTTTCTGTTGAAGGAGAAGTAGTCATTGTTATTTATTTTTATTATTTCTGCGAAATATATACATAAATACACACACTTTCTAGTTTCTTTTCCGCATGGAGTCTGACATTTAATTTTAATTGCCTTAGATTTTTTATGAACCATAACAAGTTCCTAGTTTAGTTTTTCCCTGGAGCACTTGTTTTGCCAACCAAATTACAAAGGAGCTCCTACCCATACTACGGATGGCTATAATTGCTACTGTATCTGTGTGGAGTGGCTTACAATTTTTTTACTTTTTGGAGCTGATGTGACTGTCAAAATTTTAAGGCTAATACTAACCCATTGTTGTGTTGAACATCACTTTCTGAACATTAATTTTGTATCTAATTTTACATTCAATGAAGTTCGATCCTATTGGGAGGCCTACAGGCTACAGTTACATTCTCCTTGCTATCCAGAGTTTCATTTAACATGTTCCATTTGGACGTCAGAGAACTACAGTTTTTCTTCTTTCATTGTTCTACTAACCCATTGTTGTGTGGTCATTCTTCAAGAGGAAAGCTAAGTTTGGGTGTGCTATAAGAGCCATCTTGTGGGTTCTTTGGAAGGAATGATAAGTTAGCGTTTTAAAGATAAACATAGCACCTTTGTGGGTATCTGGTGTTCATATTACATCTTGGGGCCACCCCTGGTGTTCTTTAGCCAGTAGTTTGTAGTTACTCTATGTCTTGATTCAGGCCAACTGAAGTGGTTGTTATGTAAGTTCCTTAGGTTGAGTTGGATGCTGGTTCATCTTCCTATCATTTGAACATTTTTGTGCGTGATTGCGTGTTAGTTTCCTGAAAGAAAAGCCTAGAAATAAGCTTGACTGGTGGCAGTGGAGAACTCACTCTGAGATGAAAAAAGCCCATTGCATTACTTGAAATTTCTGTTTAACTTTACTTTTAAGTTCATGGCAGACTCTGGATGCCCAAAGGGACAGTCATTCTCTTCAAATGTCACACAGGAGATACCTTAATCTGTAAAGAGCGATATTTTGATTTATGTAAAGAAAAGTATCGTTCTTCTTAAATCATCCACACTCAGGCCTCCAATATTTGTCCAGTGACTGCTTTCCAATTATCTAAGTAGCTTCCTCCTTCTTTGCTCCTTCCCAGAAGAAGTCCTTGATATTTATTTTTTTTGTCAATGATCAAGCTCACTTTTGCTAGGGATTCTGAAAACGCAGAGAAAGTATAAGAGATAACAATTGAAGCCATTAGCATTGCAACACTCATTTTTTTACCGTTATGAGGGAAAATAAAAAATGATGAAACAATTCTATGCACATTGGAGGATCTTCAAATCTCAATTGGTCATGGCACTCTTGTTTCTCATTTTTATGAATAAAACTAGAGATATATGGAATTTTTTTCAACAGTCTAGATGGACTGTTTAAATTCCTATTTCTTCTCTAGATATTTAAACTTTACGTTACCTTAATTACATCTAGACTTCACTAAGCTCAGGTAGTGGGACACCATAATTATGACCTATTTGGAGTGATCATGGATGGCACCTGGATTTGACATAGCATGTTTCATTTGGAGTTGTAGGGGGTTCTGAAATGGAAATTGATGGACTAAGATTCACTTTTTCCCCTTTCAATTATCTAATTCGAATTTCTTATGGTGAAATGCATTCTAGATTGACTTTCCTATACCTTTTTTCAGTTTACAGATGAGGAAGTTGAACGCTGCTATGAAGAGTTTTATGACGATGTGCATACTGAGTTTTTGAAGTACGGGGAAATTGTTAATTTCAAGGTCTCCTGCATTTGGTACCTTGTTTCTATGGTTTATGTATGCTTTTGCTTTGTTGTGATTTCTTTATCTGAGCAGTGAAAAAATTCTAAAACTGAGTTTGGTTTTTGATATTCAACCTCAAATTGCATTTGCTTACAGCAAAGACTAGTTTATCATTAATCCTAAATATGGTATTTTTATTCAGGTGTGTAAAAATGGTTCTTTTCACTTAAGAGGGAACCTTTACGTGCACTATAAGTCAGTGGATTCAGCTGTGCTTGCTTATAATGCCAACAATGGCCGTTTCTATGCAGGGAAACAGGTACTGATTTCTCCAATTATCCTCACTAAGACTAAGAGTCAATGACTAGACGAAAGATATCTGTTCACAATCCAAAACGTCCTTGCATATACTGTCCGGTTGAAAGCAAGATATTTTGAACTTTTGTATTGTGTTCATGTTATGAAGCTTCCCACTGGCCTCATTTTAGGTTAGAGCAAAGAAAGTCCTCTTGAGATCACCCAATTTTATTTAGACCTGTAAAAATGAATAAACTGGACTTCCTACGGCCCTCATGGTGTTCTCAATCCAAAGCTTTTGCCGATTATTCTATTCAAAACATTTGTTTAAATTAGAGTGCTTTTATTTCTTCGGTTTAGTTATTGTATTACTTTTCTTTTGTTATGTTGCCTTGTCTTTTTTAGCATCAAACTCCTTTCACTATATCAATAAAACTTTTGTTTCCTTTTTAGAAAAAAAAATCAAAAGTGGAGCCCATGGCTAAAATACCAAGAATGGTAGGGAAATACTGAAATCATGAGCTTAAATTAATCCAGATCCTTCATGTTGTCATTGATTCAAAGAATTATGCCTTGAACGTGGGGTGCCCAATAAGCTTTATTTGACTGAGAATTATTAAGCTTGGTTCGTCTTCTGTAAGTGTATGCAAACTGAAATTTTATGTACAAATAACAAAAAAACAAGACTTCCCAATTCACGTTTATGGTTGCCCAAGGACAAAATTATAAAAACCGTTCTTGCAGATATCATCTTTTGATAGTATTGCGCGTAGCTCAGTTAGTAATTTCTCCCCGGTCCTTCTACAATCTACAGCCTTCACTGTTGGTCTTTTGTTTGATTTCTTTTCCAAGTCTGGCTCCCCCCCTTTTTCAGCCGACTTTGAAGTGGTGCTTTGTTGTTCATCTGGGGATTTTTTTTATGACAGATAATATGTGAATTCATAAATGTTACTAGATGGAAGAT

mRNA sequence

CTTAAATTAGTTATTTTGGACAATTTTCTTATCTTCAACCAGAGACAACACTGATTTACACTTTTTTTTATCCAAGGGTGAAAATTCTTAGAAATAACACTCCCAAGTTTTCACTTTTAAAAACTAGGACACTTTTTAAAACTTCCTTATACTAGTTTTTCTCTTTAAATCGAGAGAAACCGAACCTAGAGGGAAATATACTCAGGCATGCAAAAAAAATCCATCTAGCTTTGGTTCTAGGTGATGGATGATCCATCCATTTGCAAGTACCATTAAACAAAATAACCTTTTTCCTCTCTCAATCTCTTTTGGTCTTGTTCACGTTTATTCATACAAATTTACCTTGAATGAGCGGCTAGAACTTGGTAGGAAGATCAATGTTTACCCTAACTTATTTCTCCACAGCACAAATCTGAATCCACCGTCACTCATTCATTAATTTCATTTGATGTTGTATAATTTTGCATGAATCAAAATTCACGATTCGGTAAGCTTGTATGTATAAATCCACCGAGATGTACCATAAGATCCAAACAAACAATCAATAAGTTAGAAAAGAAGTGAAGTATTTGAACGAGTTTTAATTTTGTGAGACCAAAACGTCACCGAAGCTATTTCCCACCCAAGAGTTCCCATTAATTGCACCAAAACAAAAGTGTTTCGAATTTTTTCTTCACCATCGACGCAGGAGGGTCGTCTCAACGGAGACTGCTGATAAATTGGAAGTTCCATCAACAAACACCCAATCAACACGACACCGCGATTGAATCCCTTCGAGGCGCCCTTTCGTTACTCTGCTTTGATTTAGAGCTCCATTTTGTGAGCCTAATGGAGGAACCTAAACTCATAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTAAGCCATGTTCGGTGGATAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATTAAACGGAAGCAATTAAGAAAAGAGTTGGCGCTAAAAAGGCTACAGGAAGAGGAGGCTCGGTTGAACGACCCTGAAGAGCAGAGGAGGGTTCAGTTGATGGAGTTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTTGAGGAGCGTGAAAGGGCGTGGATGGAAGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAAAGGAGAGCGCTGGAAGAAGAATCGACGCCGCGCCAGGCTGAAAATGAAAATGAGTTTAATGAGGAAGATGGTTGGGAATACATAGAAGGGCCTGCAGAAATAATTTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGGGTGTTGAACCGGAGAAAAGCCTTGAGGATGCTCATAGACCTACATCAAATCCTCTTCCTCCACAATCTGAAGCTTTTACAGATTATAAGAATACTCCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGATAAATCACATTGCCCGTTCCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTGCTTATCAAGAACATGTATAATGGTCCAGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAGGTCTGTTAATGATGCTCATACAATTATTGGACTTACTGCAAGAATTGTGTCAAATTGTCATGGAGGGTTACAGTCTTGCTCTTGAGTCCCTTTGGAGTTGATAATACGAAAACAAATTTTACTTCACTAAGCTCAGGTAGTGGGACACCATAATTATGACCTATTTGGAGTGATCATGGATGGCACCTGGATTTGACATAGCATGTTTCATTTGGAGTTGTAGGGGGTTCTGAAATGGAAATTGATGGACTAAGATTCACTTTTTCCCCTTTCAATTATCTAATTCGAATTTCTTATGGTGAAATGCATTCTAGATTGACTTTCCTATACCTTTTTTCAGTTTACAGATGAGGAAGTTGAACGCTGCTATGAAGAGTTTTATGACGATGTGCATACTGAGTTTTTGAAGTACGGGGAAATTGTTAATTTCAAGGTGTGTAAAAATGGTTCTTTTCACTTAAGAGGGAACCTTTACGTGCACTATAAGTCAGTGGATTCAGCTGTGCTTGCTTATAATGCCAACAATGGCCGTTTCTATGCAGGGAAACAGATAATATGTGAATTCATAAATGTTACTAGATGGAAGAT

Coding sequence (CDS)

ATGGAGGAACCTAAACTCATAGGAGGAGGAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTTAAGCCATGTTCGGTGGATAATCTATGCAGGAAGGAGAAGAGGAAAGCGTTGAAGAAGATTAAACGGAAGCAATTAAGAAAAGAGTTGGCGCTAAAAAGGCTACAGGAAGAGGAGGCTCGGTTGAACGACCCTGAAGAGCAGAGGAGGGTTCAGTTGATGGAGTTGGAGGAGGAGGAGAGGTCGGAGAGGGAGAGGAAGCTCTTTGAGGAGCGTGAAAGGGCGTGGATGGAAGCTATGGAGTTGAAGAAGAAGAAGATGGCTGAGGAGGAAGAAGAAGAGCAGCAAAGGAGAGCGCTGGAAGAAGAATCGACGCCGCGCCAGGCTGAAAATGAAAATGAGTTTAATGAGGAAGATGGTTGGGAATACATAGAAGGGCCTGCAGAAATAATTTGGAAAGGAGAAGAGATAATTTTGAAGAAGAAACTAATTAAGGTTCCTAAGAAGGGTGTTGAACCGGAGAAAAGCCTTGAGGATGCTCATAGACCTACATCAAATCCTCTTCCTCCACAATCTGAAGCTTTTACAGATTATAAGAATACTCCAATTTCAACTAGACAAGTGATTGAGGATGTTGCAAGCCAAGTGCCAAACTTTGGAACTGAACAGGATAAATCACATTGCCCGTTCCATCTTAAAACTGGAGCTTGTCGATTTGGTCAACGTTGTAGCAGAATTCACTTCTACCCTGACAAATCGTGTACATTGCTTATCAAGAACATGTATAATGGTCCAGGCCTTGCTTGGGAGCAAGACGAGGGGCTGGAGGTCTGTTAA

Protein sequence

MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVC

Homology

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BLAST of Cmc06g0170351 vs. NCBI nr
Match: XP_008452219.1 (PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo])

HSP 1 Score: 515.0 bits (1325), Expect = 4.1e-142
Identity = 276/280 (98.57%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEEPKL GGGGGG   EEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ
Sbjct: 1   MEEPKLGGGGGGG---EEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS
Sbjct: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
           LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 277

[Close]

BLAST of Cmc06g0170351 vs. NCBI nr
Match: XP_031738076.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.7e-133
Identity = 259/280 (92.50%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEE +LIG           EEEEEVKPCSV+NLCRKEKRKALKKIKRKQLRKELALKRLQ
Sbjct: 1   MEELELIG-----------EEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEE RLNDPEEQRR+QLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEVRLNDPEEQRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEESTPR+AENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKK VEPEKS
Sbjct: 121 RRALEEESTPREAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
            EDAHRPTSNPLPPQSEAFTDYKNTPIST+QVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 FEDAHRPTSNPLPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           CRFGQRCSRIHFYP+KSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 CRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269

[Close]

BLAST of Cmc06g0170351 vs. NCBI nr
Match: XP_004134259.1 (zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE8650193.1 hypothetical protein Csa_009557 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.7e-133
Identity = 259/280 (92.50%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEE +LIG           EEEEEVKPCSV+NLCRKEKRKALKKIKRKQLRKELALKRLQ
Sbjct: 1   MEELELIG-----------EEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEE RLNDPEEQRR+QLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEVRLNDPEEQRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEESTPR+AENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKK VEPEKS
Sbjct: 121 RRALEEESTPREAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
            EDAHRPTSNPLPPQSEAFTDYKNTPIST+QVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 FEDAHRPTSNPLPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           CRFGQRCSRIHFYP+KSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 CRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269

[Close]

BLAST of Cmc06g0170351 vs. NCBI nr
Match: XP_031738075.1 (zinc finger CCCH domain-containing protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 484.2 bits (1245), Expect = 7.7e-133
Identity = 259/280 (92.50%), Postives = 265/280 (94.64%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEE +LIG           EEEEEVKPCSV+NLCRKEKRKALKKIKRKQLRKELALKRLQ
Sbjct: 1   MEELELIG-----------EEEEEVKPCSVENLCRKEKRKALKKIKRKQLRKELALKRLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEE RLNDPEEQRR+QLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEVRLNDPEEQRRIQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEESTPR+AENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKK VEPEKS
Sbjct: 121 RRALEEESTPREAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKSVEPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
            EDAHRPTSNPLPPQSEAFTDYKNTPIST+QVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 FEDAHRPTSNPLPPQSEAFTDYKNTPISTKQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           CRFGQRCSRIHFYP+KSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 CRFGQRCSRIHFYPEKSCTLLIKNMYNGPGLAWEQDEGLE 269

[Close]

BLAST of Cmc06g0170351 vs. NCBI nr
Match: XP_038905963.1 (zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_038905964.1 zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida])

HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-131
Identity = 255/282 (90.43%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEEP LIG             EEE KPCS++NLCRKEKRKALKKIKRKQLRKE+ALK LQ
Sbjct: 1   MEEPNLIG-------------EEEEKPCSMENLCRKEKRKALKKIKRKQLRKEVALKMLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEEARLNDPEEQRR++LMELEEEERSERERKLFEE ERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEARLNDPEEQRRIRLMELEEEERSERERKLFEESERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEEST RQAENENEFNEEDGWEYIEGPAE+IWKGEEIILKKKLIKVPKKGV+PEKS
Sbjct: 121 RRALEEESTARQAENENEFNEEDGWEYIEGPAEVIWKGEEIILKKKLIKVPKKGVQPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
           LEDAHRPTSNPLPPQSEAFTDY N PISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 LEDAHRPTSNPLPPQSEAFTDYMNAPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVC 283
           CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVC
Sbjct: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLEVC 269

[Close]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot
Match: Q9SY74 (Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=At1g10320 PE=2 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-69
Identity = 164/283 (57.95%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 13  GEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQ 72
           GE+E  EE +E+    S     RKEKRKA+KK+KRKQ+RKE+A K  +E +A+LNDP EQ
Sbjct: 18  GEKESFEESKEKAAEMS-----RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQ 77

Query: 73  RRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEQQRRALEEES 132
            R++ +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE++ + LEE  
Sbjct: 78  ERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELR 137

Query: 133 TPRQAENENEFNEEDG-WEYI-EGPAEIIWKGEEIILKKKLIKVPKKGV---------EP 192
               + N+    +EDG +EYI EGP EII++G EIILKK  ++VPKK V           
Sbjct: 138 KLEASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNA 197

Query: 193 EKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLK 252
           E  L+ + RPTSNPLPP SEA  +Y+N   S +Q++E VA +VPNFGTEQDK+HCPFHLK
Sbjct: 198 EFVLQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLK 257

Query: 253 TGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           TGACRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLE
Sbjct: 258 TGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLE 294

[Close]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot
Match: Q6YVX9 (Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0557500 PE=2 SV=2)

HSP 1 Score: 169.9 bits (429), Expect = 4.2e-41
Identity = 113/247 (45.75%), Postives = 146/247 (59.11%), Query Frame = 0


Query: 35  RKEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFE 94
           RKE+R+  KK +R++ R+E A    +  EA   DPEE+RR++ +E  E + SER R+ FE
Sbjct: 18  RKERRRERKKERRRRARREAAEAARKAAEALAADPEEERRLRELEEAEADASERARRAFE 77

Query: 95  ERERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIE-GPAE 154
           + ER W+EA   +  + A    EE    A E+ S   + ++ N   E+D WEY+E GPAE
Sbjct: 78  DAERRWLEAAAARAAEKAAAAREES--TAPEDSSREYKDDHGNGTEEDDEWEYVEDGPAE 137

Query: 155 IIWKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVI 214
           IIW+G EI +KKK++KVPKK  E                           N PI      
Sbjct: 138 IIWEGNEITVKKKMVKVPKKAKE---------------------------NQPI------ 197

Query: 215 EDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAW 274
                       +QDK+HCPFHLKTGACRFG RCSR+HFYPDKSCTLL++NMY+GPGLA 
Sbjct: 198 ------------QQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLLMRNMYSGPGLAL 217

Query: 275 EQDEGLE 281
           EQDEGLE
Sbjct: 258 EQDEGLE 217

[Close]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot
Match: Q15696 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 8.6e-10
Identity = 85/244 (34.84%), Postives = 123/244 (50.41%), Query Frame = 0


Query: 36  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERER-KLFE 95
           K+ R ALKK KRK+ R+ELA  RL++      + EE   ++  +LEEE+  ERER +L E
Sbjct: 16  KKYRAALKKEKRKKRRQELA--RLRDSGLSQKEEEEDTFIEEQQLEEEKLLERERQRLHE 75

Query: 96  E---RERAWMEAMELKKKK--MAEEEEEEQQRRALE--EESTPRQAENENEFNEEDGWEY 155
           E   RE+   E   +KK+K   A++ +EEQ+R+  E  EE   ++ E E +  +E     
Sbjct: 76  EWLLREQKAQEEFRIKKEKEEAAKKRQEEQERKLKEQWEEQQRKEREEEEQKRQEK---- 135

Query: 156 IEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPI 215
                    K +E  L+K L        + E  LE+      NP PP      D++    
Sbjct: 136 ---------KEKEEALQKML-------DQAENELENG-TTWQNPEPP-----VDFR---- 195

Query: 216 STRQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYN 272
                             E+D+++CPF+ KTGACRFG RCSR H +P  S TLLIK+M+ 
Sbjct: 196 ----------------VMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFT 211

[Close]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot
Match: Q15695 (Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens OX=9606 GN=ZRSR2P1 PE=5 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 6.2e-08
Identity = 81/242 (33.47%), Postives = 118/242 (48.76%), Query Frame = 0


Query: 36  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERER-KLFE 95
           K+ R ALKK KRK+ R+ELA  R   +     + EE   ++  +LEEE+  ERER +L E
Sbjct: 22  KKYRAALKKEKRKKRRQELARLR---DSGLSQEEEEDTFIEEQQLEEEKLLERERERLHE 81

Query: 96  E---RERAWMEAMELKKKK--MAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIE 155
           E   RE+   E   +KK+K   A++  EEQ+R+  E+    ++ E E E  ++       
Sbjct: 82  EWLLREQKAQEEFRIKKEKEEAAKKWLEEQERKLKEQWKEQQRKEREEEEQKQQE----- 141

Query: 156 GPAEIIWKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPIST 215
                         K+K   V K   + E  LE++     NP PP      D++      
Sbjct: 142 -------------KKEKEEAVQKMLDQAENDLENS-TTWQNPEPP-----VDFR------ 201

Query: 216 RQVIEDVASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGP 272
                           E+D+++CPF+ KTGACRFG RCSR H +P  S TLLIK+M+   
Sbjct: 202 --------------VMEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTF 216

[Close]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot
Match: Q62377 (U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Mus musculus OX=10090 GN=Zrsr2 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.6e-06
Identity = 77/236 (32.63%), Postives = 117/236 (49.58%), Query Frame = 0


Query: 36  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 95
           ++K  AL+K +R++ R++ AL RL+E E    + EE        L EE+R E ER L EE
Sbjct: 19  RKKYLALRKKERRKRRRQ-ALARLREAELAQKEEEED------PLAEEKRLEEERLLEEE 78

Query: 96  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 155
           R+R   E + L+++K    +EE + ++  EEE+  R+ E E +   E  WE  +      
Sbjct: 79  RQRLHEEWL-LREEK---AQEEFRAKKKKEEEARKRKEELERKLKAE--WEEQQRKEREE 138

Query: 156 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 215
            + +    +++   V K   + E  LE+      NP PP                    D
Sbjct: 139 EEQKRQEKREREEAVQKMLDQAENELENG-GTWQNPEPPM-------------------D 198

Query: 216 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 272
           +         E+D+++CPF+ KTGACRFG RCSR H +P  S TLLIK M+   G+
Sbjct: 199 IRV------LEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKGMFTTFGM 215

[Close]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL
Match: A0A1S3BUH0 (zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC103493302 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.0e-142
Identity = 276/280 (98.57%), Postives = 276/280 (98.57%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60
           MEEPKL GGGGGG   EEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ
Sbjct: 1   MEEPKLGGGGGGG---EEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQ 60

Query: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120
           EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ
Sbjct: 61  EEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEEEEQQ 120

Query: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180
           RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS
Sbjct: 121 RRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVEPEKS 180

Query: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240
           LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA
Sbjct: 181 LEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLKTGA 240

Query: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 CRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 277

[Close]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL
Match: A0A5D3BNF0 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00530 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 36  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 95
           KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE
Sbjct: 26  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 85

Query: 96  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 155
           RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII
Sbjct: 86  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 145

Query: 156 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 215
           WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED
Sbjct: 146 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 205

Query: 216 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 275
           VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ
Sbjct: 206 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 265

Query: 276 DEGLE 281
           DEGLE
Sbjct: 266 DEGLE 270

[Close]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL
Match: A0A5A7V495 (Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004030 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 36  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 95
           KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE
Sbjct: 26  KEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEE 85

Query: 96  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 155
           RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII
Sbjct: 86  RERAWMEAMELKKKKMAEEEEEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEII 145

Query: 156 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 215
           WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED
Sbjct: 146 WKGEEIILKKKLIKVPKKGVEPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIED 205

Query: 216 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 275
           VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ
Sbjct: 206 VASQVPNFGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQ 265

Query: 276 DEGLE 281
           DEGLE
Sbjct: 266 DEGLE 270

[Close]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL
Match: A0A6J1J5M6 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111482827 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.9e-125
Identity = 246/284 (86.62%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEV----KPCSVDNLCRKEKRKALKKIKRKQLRKELAL 60
           M+EP+ +G      EEEE+ +  E     KPCS++NLCRKEKRKALKKIKRKQLRKE AL
Sbjct: 1   MKEPEFVG------EEEEKPQGTEAGPLEKPCSLENLCRKEKRKALKKIKRKQLRKEEAL 60

Query: 61  KRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEEEE 120
           K+LQEEE RLNDPEE+RR++LMELEEEERSERERKLFEERERAW+EAMELKKKKMAEEEE
Sbjct: 61  KKLQEEEVRLNDPEEKRRIRLMELEEEERSERERKLFEERERAWLEAMELKKKKMAEEEE 120

Query: 121 EEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGVE 180
           EEQ+RRALEEEST RQAENENE NEEDGWEYIEGPAE+IWKGEEIILKKKLIK+PKKGVE
Sbjct: 121 EEQRRRALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGEEIILKKKLIKIPKKGVE 180

Query: 181 PEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHL 240
           PEKSLEDAHRPTSNPLPPQSE FTD KN PISTRQVI+DVASQVPNFGTEQDKSHCPFHL
Sbjct: 181 PEKSLEDAHRPTSNPLPPQSEDFTDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFHL 240

Query: 241 KTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           KTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 KTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 278

[Close]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL
Match: A0A6J1ERZ7 (zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111435982 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.4e-124
Identity = 248/285 (87.02%), Postives = 262/285 (91.93%), Query Frame = 0


Query: 1   MEEPKLIGGGGGGEEEEEEEEEEEV----KPCSVDNLCRKEKRKALKKIKRKQLRKELAL 60
           MEEP+ +G      EEEE+ +  E     KPCS++NLCRKEKRKALKKIKRKQLRKE AL
Sbjct: 1   MEEPEFVG------EEEEKPQGTEAGSIEKPCSLENLCRKEKRKALKKIKRKQLRKEEAL 60

Query: 61  KRLQEEEARLNDPEEQRRVQLMELEEEERSERERKLFEERERAWMEAMEL-KKKKMAEEE 120
           K+LQEEEARLNDPEEQRR++LMELEEEERSERERKLFEERERAW+EAMEL KKKKMAEEE
Sbjct: 61  KKLQEEEARLNDPEEQRRIRLMELEEEERSERERKLFEERERAWLEAMELNKKKKMAEEE 120

Query: 121 EEEQQRRALEEESTPRQAENENEFNEEDGWEYIEGPAEIIWKGEEIILKKKLIKVPKKGV 180
           EEEQ+RRALEEEST RQAENENE NEEDGWEYIEGPAE+IWKG+EIILKKKLIKVPKKGV
Sbjct: 121 EEEQRRRALEEESTARQAENENELNEEDGWEYIEGPAEVIWKGDEIILKKKLIKVPKKGV 180

Query: 181 EPEKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFH 240
           EPEKSLEDAHRPTSNPLPPQSE  TD KN PISTRQVI+DVASQVPNFGTEQDKSHCPFH
Sbjct: 181 EPEKSLEDAHRPTSNPLPPQSEDITDCKNAPISTRQVIDDVASQVPNFGTEQDKSHCPFH 240

Query: 241 LKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           LKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 241 LKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 279

[Close]

BLAST of Cmc06g0170351 vs. TAIR 10
Match: AT1G10320.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 264.6 bits (675), Expect = 9.0e-71
Identity = 164/283 (57.95%), Postives = 205/283 (72.44%), Query Frame = 0


Query: 13  GEEEEEEEEEEEVKPCSVDNLCRKEKRKALKKIKRKQLRKELALKRLQEEEARLNDPEEQ 72
           GE+E  EE +E+    S     RKEKRKA+KK+KRKQ+RKE+A K  +E +A+LNDP EQ
Sbjct: 18  GEKESFEESKEKAAEMS-----RKEKRKAMKKLKRKQVRKEIAAKEREEAKAKLNDPAEQ 77

Query: 73  RRVQLMELEEEERSERERKLFEERERAWMEAMELKKKKMAEE----EEEEQQRRALEEES 132
            R++ +E E+  R E+E K FEE ERAW EAME+K+KK  EE    EEEE++ + LEE  
Sbjct: 78  ERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKKEEEEEAKREEEERRWKDLEELR 137

Query: 133 TPRQAENENEFNEEDG-WEYI-EGPAEIIWKGEEIILKKKLIKVPKKGV---------EP 192
               + N+    +EDG +EYI EGP EII++G EIILKK  ++VPKK V           
Sbjct: 138 KLEASGNDECGEDEDGEYEYIEEGPPEIIFQGNEIILKKNKVRVPKKSVVQVDGHESSNA 197

Query: 193 EKSLEDAHRPTSNPLPPQSEAFTDYKNTPISTRQVIEDVASQVPNFGTEQDKSHCPFHLK 252
           E  L+ + RPTSNPLPP SEA  +Y+N   S +Q++E VA +VPNFGTEQDK+HCPFHLK
Sbjct: 198 EFVLQISDRPTSNPLPPGSEASANYQNVS-SAQQILESVAQEVPNFGTEQDKAHCPFHLK 257

Query: 253 TGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 281
           TGACRFGQRCSR+HFYP+KSCTLL+KNMYNGPG+ WEQDEGLE
Sbjct: 258 TGACRFGQRCSRVHFYPNKSCTLLMKNMYNGPGITWEQDEGLE 294

[Close]

BLAST of Cmc06g0170351 vs. TAIR 10
Match: AT1G27650.1 (U2 snRNP auxiliary factor small subunit, putative )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 223 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 272
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]

BLAST of Cmc06g0170351 vs. TAIR 10
Match: AT5G42820.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 223 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 272
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

[Close]

BLAST of Cmc06g0170351 vs. TAIR 10
Match: AT5G42820.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 223 FGTEQDKSHCPFHLKTGACRFGQRCSRIHFYPDKSCTLLIKNMYNGPGL 272
           FGTE+D+ +CPF+ K GACR G RCSR+H  P  S TLL+ NMY  P +
Sbjct: 9   FGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDM 57

The following BLAST results are available for this feature:

BLAST of Cmc06g0170351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452219.1	4.1e-142	98.57	PREDICTED: zinc finger CCCH domain-containing protein 5 [Cucumis melo]	[more]
XP_031738076.1	7.7e-133	92.50	zinc finger CCCH domain-containing protein 5 isoform X3 [Cucumis sativus]	[more]
XP_004134259.1	7.7e-133	92.50	zinc finger CCCH domain-containing protein 5 isoform X2 [Cucumis sativus] >KAE86...	[more]
XP_031738075.1	7.7e-133	92.50	zinc finger CCCH domain-containing protein 5 isoform X1 [Cucumis sativus]	[more]
XP_038905963.1	2.5e-131	90.43	zinc finger CCCH domain-containing protein 5 isoform X3 [Benincasa hispida] >XP_...	[more]

BLAST of Cmc06g0170351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SY74	1.3e-69	57.95	Zinc finger CCCH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6YVX9	4.2e-41	45.75	Zinc finger CCCH domain-containing protein 16 OS=Oryza sativa subsp. japonica OX...	[more]
Q15696	8.6e-10	34.84	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote...	[more]
Q15695	6.2e-08	33.47	Putative U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-rela...	[more]
Q62377	2.6e-06	32.63	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related prote...	[more]

BLAST of Cmc06g0170351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BUH0	2.0e-142	98.57	zinc finger CCCH domain-containing protein 5 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A5D3BNF0	1.5e-126	100.00	Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A5A7V495	1.5e-126	100.00	Zinc finger CCCH domain-containing protein 5 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1J5M6	2.9e-125	86.62	zinc finger CCCH domain-containing protein 5 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1ERZ7	2.4e-124	87.02	zinc finger CCCH domain-containing protein 5 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cmc06g0170351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10320.1	9.0e-71	57.95	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT1G27650.1	1.6e-11	57.14	U2 snRNP auxiliary factor small subunit, putative	[more]
AT5G42820.2	1.6e-11	57.14	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G42820.1	1.6e-11	57.14	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..67
None	No IPR available	COILS	Coil	Coil	coord: 101..129
None	No IPR available	COILS	Coil	Coil	coord: 77..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..144
None	No IPR available	PANTHER	PTHR12620:SF4	ZINC FINGER CCCH-TYPE, RNA BINDING MOTIF AND SERINE/ARGININE RICH 2	coord: 35..281
IPR009145	U2 auxiliary factor small subunit	PRINTS	PR01848	U2AUXFACTOR	coord: 251..271 score: 44.37 coord: 232..251 score: 70.0
IPR009145	U2 auxiliary factor small subunit	PANTHER	PTHR12620	U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT	coord: 35..281
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 232..251 e-value: 3.9E-5 score: 23.4
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 226..254 score: 12.042086

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0170351.1	Cmc06g0170351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0089701	U2AF complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding