Homology
BLAST of Cmc06g0169941 vs. NCBI nr
Match:
KAA0034938.1 (putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 1047.3 bits (2707), Expect = 4.7e-302
Identity = 515/573 (89.88%), Postives = 539/573 (94.07%), Query Frame = 0
Query: 1 MKRGSNKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAAHANLIKDELVAMISKVNV 60
MKRGSNKQNN QSRSTVQI CYNCNK GHLA+NCRN+SRPAA ANLI+DELVAMISKVNV
Sbjct: 105 MKRGSNKQNNLQSRSTVQIFCYNCNKPGHLAKNCRNRSRPAAQANLIEDELVAMISKVNV 164
Query: 61 IGGSEGWWLDTSASRHVCYDLSLFRKYNEVKDKNILLGDHHTTKVAGIGEVELKFTSGKM 120
IGGSEGWWLDT AS HVC++LSLFRKYNEVKDKNILLGDHHTTKV GIGEVELKFTS K
Sbjct: 165 IGGSEGWWLDTGASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKT 224
Query: 121 LVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLE 180
LV+KE LHTPEI+KNLV YLLNKAGFTQTIGS+LFTLTKNNVFV KGYATDGMFKLNLE
Sbjct: 225 LVVKEGLHTPEIRKNLVFGYLLNKAGFTQTIGSNLFTLTKNNVFVGKGYATDGMFKLNLE 284
Query: 181 INKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 240
INKIASSAYMLTSFNVWH RLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT
Sbjct: 285 INKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 344
Query: 241 SHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMF 300
SHK+VTRVT+PLELIHSDLCEFDG LTRNSKRYV+TFIDDCSDYTFIYLLKNKSDAYEMF
Sbjct: 345 SHKFVTRVTKPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMF 404
Query: 301 KVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKN 360
KVFVTEIE QFNKRIKRLRSDRG EYDSV+FNEFY+SKGIIHET PYSPEMNGK ERKN
Sbjct: 405 KVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTTPYSPEMNGKEERKN 464
Query: 361 RTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRT 420
RTLTEL + ILLES AAPSWWGEI KT+NYVLNRIPKSNSKTSPYEVLKHK PNLSYLRT
Sbjct: 465 RTLTELAVAILLESEAAPSWWGEIIKTVNYVLNRIPKSNSKTSPYEVLKHKIPNLSYLRT 524
Query: 421 WGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFP 480
WGCLAYVRIP+P+RRKLAS+AYECVFI YA+N+KAYRFYDLENKVIIE NDVDFFEDKFP
Sbjct: 525 WGCLAYVRIPNPERRKLASKAYECVFIGYAENSKAYRFYDLENKVIIESNDVDFFEDKFP 584
Query: 481 FKSRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYNVE 540
FKSRNSG LYSQ SGGS +SLPSIRIQTQDKEVDPEPRRSKRARTVKDF EDFEMYNVE
Sbjct: 585 FKSRNSGGLYSQTSGGSSFSSLPSIRIQTQDKEVDPEPRRSKRARTVKDFREDFEMYNVE 644
Query: 541 DPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
DPKDLT+ALSSVDANLWQEAIN+ +DSLE NRT
Sbjct: 645 DPKDLTKALSSVDANLWQEAINDGIDSLESNRT 677
BLAST of Cmc06g0169941 vs. NCBI nr
Match:
ABI34306.1 (Polyprotein, putative [Solanum demissum])
HSP 1 Score: 582.0 bits (1499), Expect = 5.5e-162
Identity = 296/558 (53.05%), Postives = 389/558 (69.71%), Query Frame = 0
Query: 21 CYNCNKLGHLARNCRNKSR-PAAHANLIKDELVAMISKVNVIGGSEGWWLDTSASRHVCY 80
C+ C K GH+AR CR + R P AN+ ++ VA+I+ +N++ +GWW D+ A+RHVCY
Sbjct: 263 CFVCGKSGHIARFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCY 322
Query: 81 DLSLFRKYNEVKD-KNILLGDHHTTKVAGIGEVELKFTSGKMLVLKEFLHTPEIQKNLVS 140
D F+KY ++ K I+LGD HTT+V G G+VEL FTSG++L LK+ L+TP ++K L+S
Sbjct: 323 DKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMS 382
Query: 141 RYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLEINKIASSAYMLTSFNVWH 200
+LLNKAGF Q I S+ + + K +FV KGYA DGMFKLN+E+NK ++S YML+S N WH
Sbjct: 383 SFLLNKAGFKQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYMLSSTNFWH 442
Query: 201 VRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSHKYVTRVTEPLELIHSD 260
RLCH+N R + MS L LIP + +FEKC CS+AKITK H V R T+ LEL+H+D
Sbjct: 443 ARLCHINDRYVGIMSSLGLIPMIK-KNFEKCEACSKAKITKRPHFQVERKTDLLELVHTD 502
Query: 261 LCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIEKQFNKRIKRL 320
+CE G LTR RY ITFIDD S +T++YL+KNKSDA+E FK ++ E+E QF ++IKR+
Sbjct: 503 ICELGGILTRGGNRYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVENQFGRKIKRI 562
Query: 321 RSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKNRTLTELVIVILLESGAAP 380
RSDRG EY+S FN F S GIIHET PYSP NG AERKNRTL EL +L+ES A
Sbjct: 563 RSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAMLIESHAPL 622
Query: 381 SWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLA 440
++WGE T YVLNR+P SK +P+E+ K P+L YLR WGCLA+VR+ DPK KL
Sbjct: 623 NFWGEAILTACYVLNRVPHKKSKLTPFELWKGYKPSLGYLRVWGCLAFVRLMDPKITKLG 682
Query: 441 SRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFPFKSRNSGDLYSQISGGSI 500
+ C F+ YA N+ AYRF++LE+ ++IE D F E+KFPF S+NSG +I +
Sbjct: 683 KKVTTCAFLGYASNSTAYRFFNLEDNIVIESGDAIFHENKFPFDSKNSGG--QRIEQNIL 742
Query: 501 SNSLPSIRIQT-QDKEV-DPEPRRSKRARTVKDFGEDFEMYNVEDPK-DLTEALSSVDAN 560
+LPS T ++KEV D E RRSKRAR KDFG DF ++NV D + L EALSS D+
Sbjct: 743 --TLPSSSTSTLKNKEVNDFELRRSKRARVEKDFGPDFYVFNVGDDRLTLKEALSSHDSI 802
Query: 561 LWQEAINNEMDSLEPNRT 574
W+EA+N+EM+SL N+T
Sbjct: 803 FWKEAVNDEMESLISNKT 815
BLAST of Cmc06g0169941 vs. NCBI nr
Match:
KAG5527251.1 (hypothetical protein RHGRI_028223 [Rhododendron griersonianum])
HSP 1 Score: 496.5 bits (1277), Expect = 3.1e-136
Identity = 270/597 (45.23%), Postives = 370/597 (61.98%), Query Frame = 0
Query: 4 GSNKQNNPQSRSTVQ--IVCYNCNKLGHLARNCRNKSRPAAHANLIKDELVAMISKVNVI 63
GSN+ NN + R+ + CYNC K GH A++CR+K + + AN+++++LVAM++++N+
Sbjct: 151 GSNRPNNKRKRNNKKKNDKCYNCGKKGHYAKDCRSKKQKTS-ANMVEEQLVAMVTEINMA 210
Query: 64 GGSEGWWLDTSASRHVCYDLSLFRKYNEVKDKNILLGDHHTTKVAGIGEVELKFTSGKML 123
S GWW D+ A+ HVC D SLF+ Y ++ + +G+ KVAG G EL FTSGK L
Sbjct: 211 DTSSGWWFDSGATVHVCKDRSLFKTYEKLDGQEAQMGNQDCAKVAGKGSAELNFTSGKTL 270
Query: 124 VLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLEI 183
L LH P+++KNLVS L+ K GF SD LTKN +FV KGY +GMFKL++
Sbjct: 271 TLLNVLHVPDMRKNLVSVDLVCKKGFRVVFESDKLILTKNGMFVGKGYGCNGMFKLSINE 330
Query: 184 NKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHD--FEKCACCSQAKITK 243
N ASS Y++ SF++WH RL H+N R I NMSR LI + HD +KC C++AK+ K
Sbjct: 331 NNTASS-YIVDSFSLWHSRLAHLNFRSIKNMSRFGLI---NYHDNVCDKCEICAKAKMAK 390
Query: 244 TSHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEM 303
S V R +E L+LIHSD+CE +G LTR KRY TF+DD S YTF+YLL+ K + +
Sbjct: 391 KSFPSVQRNSEILDLIHSDICELNGVLTRGGKRYFATFVDDFSKYTFVYLLRTKDEVFNK 450
Query: 304 FKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERK 363
F+ + E+E Q NK+IK LRSDRG+EY F++F GIIH+ APYSP+ NG AERK
Sbjct: 451 FQAYKNEVENQLNKKIKVLRSDRGMEYFPHEFDDFCEMHGIIHQKTAPYSPQQNGLAERK 510
Query: 364 NRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLR 423
NRTLTE+ +++ + A WGE T Y+ NRI + PYE+ K + PNLSYL+
Sbjct: 511 NRTLTEMANCMIVHANAPLYLWGEALYTACYLHNRIISRKTNLCPYELWKGRKPNLSYLK 570
Query: 424 TWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKF 483
WGCLAY R+PDPKR KL RA + +F+ YA+++KAYR DLE+ I+E +V FFE KF
Sbjct: 571 VWGCLAYYRVPDPKRTKLGPRAMKSIFVGYAEHSKAYRLLDLESNTIVESRNVKFFEHKF 630
Query: 484 PFKSRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDF----- 543
S++ + ++ SG S++ + + + ++ EPRRS R R K D
Sbjct: 631 RADSKS---VVTENSGSSLNQEVEP-QNGVKRHVLNEEPRRSTRQRKEKGLDPDHISSQS 690
Query: 544 EMYNVE------------------DPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
++ VE DPK TEA+SS DA W+EAIN+EMDSL N T
Sbjct: 691 IIFLVEGDREGVTNKIPMVLQIEADPKTFTEAISSRDAAFWKEAINDEMDSLLSNGT 738
BLAST of Cmc06g0169941 vs. NCBI nr
Match:
AAU90333.1 (Putative gag and pol polyprotein, identical [Solanum demissum])
HSP 1 Score: 493.4 bits (1269), Expect = 2.6e-135
Identity = 271/576 (47.05%), Postives = 358/576 (62.15%), Query Frame = 0
Query: 5 SNKQNNPQSRSTVQI--VCYNCNKLGHLARNCRNKSR-PAAHANLIKDELVAMISKVNVI 64
+N +NN VQ C+ C K GH+AR CR + R P AN+ ++ VA+I+ +N++
Sbjct: 92 NNGENNQAQNQQVQDKGPCFVCGKSGHIARFCRFRKRGPNPQANVTEEPFVAVITDINMV 151
Query: 65 GGSEGWWLDTSASRHVCYDLSLFRKYNEVKD-KNILLGDHHTTKVAGIGEVELKFTSGKM 124
+GWW+D+ A+RHVCYD F+KY ++ K I+LGD HTT+V G G+VEL F+SG+
Sbjct: 152 ENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQVLGKGDVELCFSSGRE 211
Query: 125 LVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLE 184
L LK+ L+TP ++KNL+S +L NK GF Q I SD + + K +FV KG
Sbjct: 212 LTLKDVLYTPSMRKNLMSSFLFNKVGFKQIIESDQYVIVKKGIFVGKG------------ 271
Query: 185 INKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 244
L LIP + +FEKC CS+AKITK
Sbjct: 272 ----------------------------------LRLIPMIK-KNFEKCEACSKAKITKR 331
Query: 245 SHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMF 304
H V R T LEL+H+D+CE G LTR R ITFIDD S +T++YL+KNKSDA+E F
Sbjct: 332 PHFQVERKTNLLELVHTDICELGGILTRGGNRNFITFIDDFSKFTYVYLMKNKSDAFENF 391
Query: 305 KVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKN 364
K ++ E+E QF ++IKR+RSDRG EY+S FN F S GIIHET PYSP NG AERKN
Sbjct: 392 KTYLHEVENQFGRKIKRIRSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGAAERKN 451
Query: 365 RTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRT 424
RTL EL +L+ES A ++WGE T YVLNR+P SK + +E+ K P+L YLR
Sbjct: 452 RTLVELTNAMLIESHAPLNFWGETILTACYVLNRVPHKKSKLTHFELWKGYKPSLGYLRV 511
Query: 425 WGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFP 484
WGCLA+VR+ DPK KL + C F+ YA N+ AYRF++LE+ ++IE D F E+KFP
Sbjct: 512 WGCLAFVRLMDPKITKLGKKVTTCAFLGYASNSTAYRFFNLEDNIVIESGDAIFHENKFP 571
Query: 485 FKSRNSGDLYSQISGGSISNSLPSIRIQT-QDKEV-DPEPRRSKRARTVKDFGEDFEMYN 544
F S+NSG +I + SLPS T ++KEV D E RRSKRAR KDFG +F ++N
Sbjct: 572 FDSKNSGG--QRIEQNIL--SLPSSSTSTLKNKEVNDFELRRSKRARIEKDFGPNFYVFN 616
Query: 545 V-EDPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
V +DP L EALSS D+ W+EA+N+EM+SL N+T
Sbjct: 632 VGDDPLTLKEALSSHDSIFWKEAVNDEMESLISNKT 616
BLAST of Cmc06g0169941 vs. NCBI nr
Match:
XP_021732277.1 (uncharacterized protein LOC110699091 [Chenopodium quinoa])
HSP 1 Score: 485.7 bits (1249), Expect = 5.4e-133
Identity = 273/576 (47.40%), Postives = 328/576 (56.94%), Query Frame = 0
Query: 2 KRGSNKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPA-AHANLIKDELVAMISKVNV 61
K +Q+ P T Q +CY C K GH+AR CRN P A A++I++ VAMI+++N+
Sbjct: 434 KNNGRQQSQPPKNGTGQFLCYRCGKPGHMARKCRNMPNPVPAQASMIEEPFVAMITEINL 493
Query: 62 IGGSEGWWLDTSASRHVCYDLSLFRKYNE-VKDKNILLGDHHTTKVAGIGEVELKFTSGK 121
GGS+GWW+DT A+RHVCYD +F+ Y E DK +LLGD H+T +AG+G VELKFTSG+
Sbjct: 494 TGGSDGWWIDTGATRHVCYDRRMFKTYTEKTDDKKVLLGDSHSTNIAGVGNVELKFTSGR 553
Query: 122 MLVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNL 181
L+LK+ LHTPE++KNLVS +LLNKAGF QTIGSDLFTLTKN +FV KGYATDGMFKLN+
Sbjct: 554 TLILKDVLHTPEMRKNLVSGFLLNKAGFIQTIGSDLFTLTKNGIFVGKGYATDGMFKLNV 613
Query: 182 EINKIASSAYMLTS-FNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKIT 241
E+NKI++SAYML S NVWH RLCHVNKRLI NMS L LIP +SL+DF+KC CSQAKIT
Sbjct: 614 EVNKISNSAYMLCSTINVWHTRLCHVNKRLIKNMSNLGLIPNISLNDFDKCDSCSQAKIT 673
Query: 242 KTSHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYE 301
KT HK V R +EPL+LIHSD+CE +G LTRN +RY ITFIDDCSDYT IYL+KNKSDA+E
Sbjct: 674 KTPHKSVIRNSEPLDLIHSDICELNGTLTRNGQRYFITFIDDCSDYTCIYLMKNKSDAFE 733
Query: 302 MFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAER 361
M AER
Sbjct: 734 M--------------------------------------------------------AER 793
Query: 362 KNRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYL 421
KNRT TELV+ I L SGAA W
Sbjct: 794 KNRTFTELVVAISLYSGAADHW-------------------------------------- 847
Query: 422 RTWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDK 481
Sbjct: 854 ------------------------------------------------------------ 847
Query: 482 FPFKSRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYN 541
FPFKSRN SGG+ S+ +P R +QD + +PE R+SKRAR KDFG DF + N
Sbjct: 914 FPFKSRN--------SGGTSSSIIPKDRSNSQDLDAEPELRKSKRARVAKDFGPDFVVLN 847
Query: 542 V-EDPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
V EDP L EAL+SVDA+LWQEA+N+EMDSLE NRT
Sbjct: 974 VEEDPSTLQEALTSVDADLWQEAVNDEMDSLESNRT 847
BLAST of Cmc06g0169941 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 263.8 bits (673), Expect = 4.4e-69
Identity = 183/634 (28.86%), Postives = 303/634 (47.79%), Query Frame = 0
Query: 2 KRGSNKQNNPQSRSTVQIVCYNCNKLGHLARNCRN--KSRPAAHANLIKDELVAMISK-- 61
+ G+ ++ +S+S V+ CYNCN+ GH R+C N K + D AM+
Sbjct: 214 RSGARGKSKNRSKSRVR-NCYNCNQPGHFKRDCPNPRKGKGETSGQKNDDNTAAMVQNND 273
Query: 62 ------------VNVIGGSEGWWLDTSASRHVCYDLSLFRKYNEVKDKNILLGDHHTTKV 121
+++ G W +DT+AS H LF +Y + +G+ +K+
Sbjct: 274 NVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKI 333
Query: 122 AGIGEVELKFTSGKMLVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFV 181
AGIG++ +K G LVLK+ H P+++ NL+S L++ G+ + + LTK ++ +
Sbjct: 334 AGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVI 393
Query: 182 EKGYATDGMFKLNLEI-NKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLH 241
KG A +++ N EI ++A S ++WH R+ H++++ + +++ +LI
Sbjct: 394 AKGVARGTLYRTNAEICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGT 453
Query: 242 DFEKCACCSQAKITKTSHKYVT-RVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSD 301
+ C C K + S + + R L+L++SD+C + +Y +TFIDD S
Sbjct: 454 TVKPCDYCLFGKQHRVSFQTSSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASR 513
Query: 302 YTFIYLLKNKSDAYEMFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHE 361
++Y+LK K +++F+ F +E++ +++KRLRSD G EY S F E+ SS GI HE
Sbjct: 514 KLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHE 573
Query: 362 TIAPYSPEMNGKAERKNRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPK-SNSKT 421
P +P+ NG AER NRT+ E V +L + S+WGE +T Y++NR P +
Sbjct: 574 KTVPGTPQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFE 633
Query: 422 SPYEVLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLE 481
P V +K + S+L+ +GC A+ +P +R KL ++ C+FI Y YR +D
Sbjct: 634 IPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPV 693
Query: 482 NKVIIEWNDVDFFEDKFPFKSRNSGDLYSQISGGSISN--SLPS---------------- 541
K +I DV F E + R + D+ ++ G I N ++PS
Sbjct: 694 KKKVIRSRDVVFRESEV----RTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVS 753
Query: 542 ----------------------IRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYNVED- 574
+ TQ +E RRS+R R E + D
Sbjct: 754 EQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDD 813
BLAST of Cmc06g0169941 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 193.4 bits (490), Expect = 7.3e-48
Identity = 159/590 (26.95%), Postives = 268/590 (45.42%), Query Frame = 0
Query: 12 QSRSTVQIVCYNCNKLGHLARNC---------RNKSRPAAHANLIKDELVAMISKVN--V 71
+ S ++ C++C + GH+ ++C +NK + M+ +VN
Sbjct: 223 KGNSKYKVKCHHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFMVKEVNNTS 282
Query: 72 IGGSEGWWLDTSASRHVCYDLSLFRKYNEVKDKNILLGDHHTTKVAGIGEVELKFTSGKM 131
+ + G+ LD+ AS H+ D SL+ EV + + ++ +
Sbjct: 283 VMDNCGFVLDSGASDHLINDESLYTDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHE 342
Query: 132 LVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLE 191
+ L++ L E NL+S L +AG + T++KN + V K GM
Sbjct: 343 ITLEDVLFCKEAAGNLMSVKRLQEAGMSIEFDKSGVTISKNGLMVVK---NSGMLNNVPV 402
Query: 192 INKIASS--AYMLTSFNVWHVRLCHVN---------KRLISNMSRLNLIPKLSLHDFEKC 251
IN A S A +F +WH R H++ K + S+ S LN + +LS E C
Sbjct: 403 INFQAYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNL-ELSCEICEPC 462
Query: 252 ACCSQAKITKTSHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYL 311
QA++ K T + PL ++HSD+C +T + K Y + F+D + Y YL
Sbjct: 463 LNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYL 522
Query: 312 LKNKSDAYEMFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYS 371
+K KSD + MF+ FV + E FN ++ L D G EY S +F KGI + P++
Sbjct: 523 IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 582
Query: 372 PEMNGKAERKNRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKS---NSKTSPYE 431
P++NG +ER RT+TE ++ + S+WGE T Y++NRIP +S +PYE
Sbjct: 583 PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 642
Query: 432 VLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVI 491
+ +K P L +LR +G YV I + K+ K ++++ +F+ Y N ++ +D N+
Sbjct: 643 MWHNKKPYLKHLRVFGATVYVHIKN-KQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKF 702
Query: 492 IEWNDVDFFE-DKFPFKSRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPE-PRRSKRA 551
I DV E + ++ ++ + S S + + P+ K + E P SK
Sbjct: 703 IVARDVVVDETNMVNSRAVKFETVFLKDSKESENKNFPN----DSRKIIQTEFPNESKEC 762
Query: 552 RTVKDFGEDFEMYNVEDPKDLTEALSSVDANLWQEAINNEM--DSLEPNR 573
++ + E N P D + + + N +E N + DS E N+
Sbjct: 763 DNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNK 801
BLAST of Cmc06g0169941 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.3e-44
Identity = 146/496 (29.44%), Postives = 226/496 (45.56%), Query Frame = 0
Query: 9 NNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAAHANLIK--DELVAMISKVNVIGG--- 68
NN QS+ + C C GH A+ C + N + + N+ G
Sbjct: 268 NNNQSKPYLG-KCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPY 327
Query: 69 -SEGWWLDTSASRHVCYD---LSLFRKYNEVKDKNILLGDHHTTKVAGIGEVELKFTSGK 128
S W LD+ A+ H+ D LSL + Y D +++ D T ++ G L T +
Sbjct: 328 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDD--VMVADGSTIPISHTGSTSLS-TKSR 387
Query: 129 MLVLKEFLHTPEIQKNLVSRY-LLNKAGFTQTIGSDLFTLTKNNVFVE--KGYATDGMFK 188
L L L+ P I KNL+S Y L N G + F + N V +G D +++
Sbjct: 388 PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 447
Query: 189 LNLEINK---IASSAYMLTSFNVWHVRLCH----VNKRLISNMSRLNLIPKLSLHDFEKC 248
+ ++ + +S + + WH RL H + +ISN S L P H F C
Sbjct: 448 WPIASSQPVSLFASPSSKATHSSWHARLGHPAPSILNSVISNYSLSVLNPS---HKFLSC 507
Query: 249 ACCSQAKITKTSHKYVT-RVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIY 308
+ C K K T T PLE I+SD+ L+ ++ RY + F+D + YT++Y
Sbjct: 508 SDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNYRYYVIFVDHFTRYTWLY 567
Query: 309 LLKNKSDAYEMFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPY 368
LK KS E F F +E +F RI SD G E+ V+ E++S GI H T P+
Sbjct: 568 PLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEF--VALWEYFSQHGISHLTSPPH 627
Query: 369 SPEMNGKAERKNRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSK-TSPYEV 428
+PE NG +ERK+R + E + +L + ++W F Y++NR+P + SP++
Sbjct: 628 TPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQK 687
Query: 429 LKHKAPNLSYLRTWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVII 484
L +PN LR +GC Y + + KL ++ +CVF+ Y+ AY L+ +
Sbjct: 688 LFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLY 747
BLAST of Cmc06g0169941 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 175.3 bits (443), Expect = 2.0e-42
Identity = 142/526 (27.00%), Postives = 240/526 (45.63%), Query Frame = 0
Query: 3 RGSNKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAAHANLIKDELVAMIS------ 62
R N+Q P C C+ GH A+ C + + N + + + +
Sbjct: 245 RSDNRQPKPYLGR-----CQICSVQGHSAKRCPQLHQFQSTTN--QQQSTSPFTPWQPRA 304
Query: 63 --KVNVIGGSEGWWLDTSASRHVCYD---LSLFRKYNEVKDKNILLGDHHTTKVAGIGEV 122
VN + W LD+ A+ H+ D LS + Y D +++ D T + G
Sbjct: 305 NLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDD--VMIADGSTIPITHTGSA 364
Query: 123 ELKFTSGKMLVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLT------KNNVFV 182
L TS + L L + L+ P I KNL+S Y L T + + F + V +
Sbjct: 365 SLP-TSSRSLDLNKVLYVPNIHKNLISVYRLCN---TNRVSVEFFPASFQVKDLNTGVPL 424
Query: 183 EKGYATDGMFKLNLEINKIAS---SAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLS 242
+G D +++ + ++ S S + + WH RL H + +++++ + +P L+
Sbjct: 425 LQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVISNHSLPVLN 484
Query: 243 -LHDFEKCACCSQAKITKT--SHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFID 302
H C+ C K K S+ +T ++PLE I+SD+ L+ ++ RY + F+D
Sbjct: 485 PSHKLLSCSDCFINKSHKVPFSNSTITS-SKPLEYIYSDVWS-SPILSIDNYRYYVIFVD 544
Query: 303 DCSDYTFIYLLKNKSDAYEMFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKG 362
+ YT++Y LK KS + F +F + +E +F RI L SD G E+ V ++ S G
Sbjct: 545 HFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEF--VVLRDYLSQHG 604
Query: 363 IIHETIAPYSPEMNGKAERKNRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSN 422
I H T P++PE NG +ERK+R + E+ + +L + ++W F Y++NR+P
Sbjct: 605 ISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPL 664
Query: 423 SK-TSPYEVLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRF 482
+ SP++ L + PN L+ +GC Y + R KL ++ +C F+ Y+ AY
Sbjct: 665 LQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKSKQCAFMGYSLTQSAYLC 724
Query: 483 YDLENKVIIEWNDVDFFEDKFPFKSRNSGDLYSQISGGSISNSLPS 505
+ + V F E FPF + N G SQ + + PS
Sbjct: 725 LHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPNWPS 753
BLAST of Cmc06g0169941 vs. ExPASy Swiss-Prot
Match:
P47024 (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY4B-J PE=3 SV=3)
HSP 1 Score: 80.9 bits (198), Expect = 5.3e-14
Identity = 91/440 (20.68%), Postives = 179/440 (40.68%), Query Frame = 0
Query: 69 LDTSASRHVCYDLSLFRKYNEVKDKNIL--LGDHHTTKVAGIGEVELK----FTSGKMLV 128
+DT + ++ D +L Y + +G + + V G G +++K T K L+
Sbjct: 414 IDTGSGVNITNDKTLLHNYEDSNRSTRFFGIGKNSSVSVKGYGYIKIKNGHNNTDNKCLL 473
Query: 129 LKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNL--- 188
+ PE + ++S Y L K T+ + S +T N + K +G+ + +
Sbjct: 474 T---YYVPEEESTIISCYDLAKK--TKMVLSRKYTRLGNKIIKIKTKIVNGVIHVKMNEL 533
Query: 189 --------EINKI---ASSAYMLTSFNVW----HVRLCHVNKRLISNMSRLNLIPKLSLH 248
+IN I +S + L ++ H R+ H + I N + N + SL
Sbjct: 534 IERPSDDSKINAIKPTSSPGFKLNKRSITLEDAHKRMGHTGIQQIENSIKHNHYEE-SLD 593
Query: 249 DFEK-----CACCSQAKITKTSHKYVTRVT------EPLELIHSDLCEFDGALTRNSKRY 308
++ C C +K TK +H Y + EP D+ + ++KRY
Sbjct: 594 LIKEPNEFWCQTCKISKATKRNH-YTGSMNNHSTDHEPGSSWCMDIFGPVSSSNADTKRY 653
Query: 309 VITFIDDCSDY--TFIYLLKNKSDAYEMFKVFVTEIEKQFNKRIKRLRSDRGIEYDSVSF 368
++ +D+ + Y T + KN + + +E QF+++++ + SDRG E+ +
Sbjct: 654 MLIMVDNNTRYCMTSTHFNKNAETILAQVRKNIQYVETQFDRKVREINSDRGTEFTNDQI 713
Query: 369 NEFYSSKGIIHETIAPYSPEMNGKAERKNRTLTELVIVILLESGAAPSWWGEIFKTINYV 428
E++ SKGI H + NG+AER RT+ +L +S +W + +
Sbjct: 714 EEYFISKGIHHILTSTQDHAANGRAERYIRTIITDATTLLRQSNLRVKFWEYAVTSATNI 773
Query: 429 LNRIPKSNSKTSPYEVLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLASRAYECVFIEYAK 471
N + ++ P + + + + + I + +KL + +
Sbjct: 774 RNYLEHKSTGKLPLKAISRQPVTVRLMSFLPFGEKGIIWNHNHKKLKPSGLPSIILCKDP 833
BLAST of Cmc06g0169941 vs. ExPASy TrEMBL
Match:
A0A5D3DCJ1 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00010 PE=4 SV=1)
HSP 1 Score: 1047.3 bits (2707), Expect = 2.3e-302
Identity = 515/573 (89.88%), Postives = 539/573 (94.07%), Query Frame = 0
Query: 1 MKRGSNKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAAHANLIKDELVAMISKVNV 60
MKRGSNKQNN QSRSTVQI CYNCNK GHLA+NCRN+SRPAA ANLI+DELVAMISKVNV
Sbjct: 105 MKRGSNKQNNLQSRSTVQIFCYNCNKPGHLAKNCRNRSRPAAQANLIEDELVAMISKVNV 164
Query: 61 IGGSEGWWLDTSASRHVCYDLSLFRKYNEVKDKNILLGDHHTTKVAGIGEVELKFTSGKM 120
IGGSEGWWLDT AS HVC++LSLFRKYNEVKDKNILLGDHHTTKV GIGEVELKFTS K
Sbjct: 165 IGGSEGWWLDTGASHHVCHELSLFRKYNEVKDKNILLGDHHTTKVVGIGEVELKFTSDKT 224
Query: 121 LVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLE 180
LV+KE LHTPEI+KNLV YLLNKAGFTQTIGS+LFTLTKNNVFV KGYATDGMFKLNLE
Sbjct: 225 LVVKEGLHTPEIRKNLVFGYLLNKAGFTQTIGSNLFTLTKNNVFVGKGYATDGMFKLNLE 284
Query: 181 INKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 240
INKIASSAYMLTSFNVWH RLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT
Sbjct: 285 INKIASSAYMLTSFNVWHARLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 344
Query: 241 SHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMF 300
SHK+VTRVT+PLELIHSDLCEFDG LTRNSKRYV+TFIDDCSDYTFIYLLKNKSDAYEMF
Sbjct: 345 SHKFVTRVTKPLELIHSDLCEFDGTLTRNSKRYVVTFIDDCSDYTFIYLLKNKSDAYEMF 404
Query: 301 KVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKN 360
KVFVTEIE QFNKRIKRLRSDRG EYDSV+FNEFY+SKGIIHET PYSPEMNGK ERKN
Sbjct: 405 KVFVTEIENQFNKRIKRLRSDRGTEYDSVAFNEFYNSKGIIHETTTPYSPEMNGKEERKN 464
Query: 361 RTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRT 420
RTLTEL + ILLES AAPSWWGEI KT+NYVLNRIPKSNSKTSPYEVLKHK PNLSYLRT
Sbjct: 465 RTLTELAVAILLESEAAPSWWGEIIKTVNYVLNRIPKSNSKTSPYEVLKHKIPNLSYLRT 524
Query: 421 WGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFP 480
WGCLAYVRIP+P+RRKLAS+AYECVFI YA+N+KAYRFYDLENKVIIE NDVDFFEDKFP
Sbjct: 525 WGCLAYVRIPNPERRKLASKAYECVFIGYAENSKAYRFYDLENKVIIESNDVDFFEDKFP 584
Query: 481 FKSRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYNVE 540
FKSRNSG LYSQ SGGS +SLPSIRIQTQDKEVDPEPRRSKRARTVKDF EDFEMYNVE
Sbjct: 585 FKSRNSGGLYSQTSGGSSFSSLPSIRIQTQDKEVDPEPRRSKRARTVKDFREDFEMYNVE 644
Query: 541 DPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
DPKDLT+ALSSVDANLWQEAIN+ +DSLE NRT
Sbjct: 645 DPKDLTKALSSVDANLWQEAINDGIDSLESNRT 677
BLAST of Cmc06g0169941 vs. ExPASy TrEMBL
Match:
A0A7N2L531 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 624.4 bits (1609), Expect = 4.7e-175
Identity = 323/572 (56.47%), Postives = 403/572 (70.45%), Query Frame = 0
Query: 6 NKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAA-HANLIKDELVAMISKVNVIGGS 65
NK P S+ C+ C K GH+AR C+ + R + AN+ ++ LVAMI+ +N++
Sbjct: 271 NKNQGPPSQDQFNRSCFVCGKSGHIARFCKFRKRESVPQANVTEEPLVAMITDINMVQYV 330
Query: 66 EGWWLDTSASRHVCYDLSLFRKYNEV-KDKNILLGDHHTTKVAGIGEVELKFTSGKMLVL 125
EGWW D+ A+RHVCYD + F+ Y ++K ++LGD TKV G GEVELKFTSG++L L
Sbjct: 331 EGWWADSGANRHVCYDKNWFKLYTPFEEEKTVMLGDSSKTKVLGSGEVELKFTSGRVLTL 390
Query: 126 KEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLEINK 185
K+ L+TP ++KNL+S +LLNKAGF QT+ SD + +TK +FV KGYA DGMFKLN+E NK
Sbjct: 391 KDVLYTPSMRKNLMSSFLLNKAGFKQTMESDNYVITKKGLFVGKGYACDGMFKLNVENNK 450
Query: 186 IA-SSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSH 245
+ SS YML+S N WH RLCH+N R + MS L LIP+LS DFEKC CSQAKITK H
Sbjct: 451 ASTSSVYMLSSINFWHARLCHINSRYVGIMSSLGLIPRLS-KDFEKCETCSQAKITKRPH 510
Query: 246 KYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMFKV 305
K V R TE LELIHSDLCEF+G LTR RY+ITFIDD S YT IYLLKNKSDA+E F+
Sbjct: 511 KNVVRNTELLELIHSDLCEFEGILTRGGNRYIITFIDDFSKYTTIYLLKNKSDAFEKFQD 570
Query: 306 FVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKNRT 365
F+ E+E QF ++IKR+RSDRG EY+S +FN F S GIIHET APYSP NG AERKNRT
Sbjct: 571 FLQEVENQFGRKIKRIRSDRGREYESSAFNSFAQSLGIIHETTAPYSPASNGVAERKNRT 630
Query: 366 LTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRTWG 425
L EL +L+ESGA +WGE T +VLNR+P S T+P+E+ K PNL YLR W
Sbjct: 631 LIELTNAMLIESGAPLHFWGEAILTACHVLNRVPHKKSHTTPFEMWKGHKPNLGYLRAWD 690
Query: 426 CLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFPFK 485
CLAYVR+ DPK KL RA C F+ YA N+ AYRF+DLENK+I E D F E+KFPFK
Sbjct: 691 CLAYVRLTDPKMPKLGIRATTCAFLGYAINSAAYRFFDLENKIIFESGDAIFHEEKFPFK 750
Query: 486 SRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYNVED- 545
+NSG + +S S S S Q Q+ + EPRRSKRAR KDFG D+ ++N+E+
Sbjct: 751 LKNSGGEENILSQPSSSTS----HFQNQE-NFEMEPRRSKRARVEKDFGPDYYVFNIEEN 810
Query: 546 PKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
PK+L EAL+S DA W+EA+N+EM+SL NRT
Sbjct: 811 PKNLKEALTSPDAIFWKEAVNDEMESLISNRT 836
BLAST of Cmc06g0169941 vs. ExPASy TrEMBL
Match:
A0A7N2R9F3 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)
HSP 1 Score: 612.8 bits (1579), Expect = 1.4e-171
Identity = 318/572 (55.59%), Postives = 399/572 (69.76%), Query Frame = 0
Query: 6 NKQNNPQSRSTVQIVCYNCNKLGHLARNCRNKSRPAA-HANLIKDELVAMISKVNVIGGS 65
NK P S+ C+ C K GH+AR C+ + R + N+ ++ LVA+I+ +N++
Sbjct: 271 NKNQGPPSQDQFNRSCFVCGKSGHIARFCKFRKRESVPQVNVTEEPLVAIITDINMVQYV 330
Query: 66 EGWWLDTSASRHVCYDLSLFRKYNEV-KDKNILLGDHHTTKVAGIGEVELKFTSGKMLVL 125
EGWW D A+RHVCYD + F+ Y ++K I+LGD TKV G GEVELKFTSG++L L
Sbjct: 331 EGWWADYGANRHVCYDKNWFKLYTPFEEEKTIMLGDSSKTKVLGSGEVELKFTSGRVLTL 390
Query: 126 KEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLEINK 185
K+ +TP ++KNL+S +LLNKAGF QT+ SD + +TK +FV KGYA DGMFKLN+E NK
Sbjct: 391 KDVFYTPSMRKNLMSSFLLNKAGFKQTMESDNYVITKKGLFVGKGYACDGMFKLNVENNK 450
Query: 186 IA-SSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSH 245
+ SS YML+S N WH RLCH+N R + MS L LIP+LS DFEKC CSQAKITK H
Sbjct: 451 ASTSSVYMLSSINFWHARLCHINSRYVGIMSSLGLIPRLS-KDFEKCETCSQAKITKKPH 510
Query: 246 KYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMFKV 305
K V R TE LELIHSDLCEF+G LTR RY+ITFIDD S YT IYLLKNKSDA+E F+
Sbjct: 511 KSVVRNTELLELIHSDLCEFEGILTRGGNRYIITFIDDFSKYTTIYLLKNKSDAFEKFQD 570
Query: 306 FVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKNRT 365
F+ E+E QF ++IKR+RSDRG EY+S +FN F S GIIHET APYSP NG ERKNRT
Sbjct: 571 FLKEVENQFGRKIKRIRSDRGREYESSAFNSFVQSLGIIHETTAPYSPASNGVVERKNRT 630
Query: 366 LTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRTWG 425
L EL +L+ESGA +WGE T +VLNR+P S T+P+E+ K PNL YLR WG
Sbjct: 631 LIELTNAMLIESGAPLHFWGEAILTACHVLNRVPHKKSHTTPFEMWKGHKPNLGYLRVWG 690
Query: 426 CLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFPFK 485
CLAYVR+ DPK KL RA C F+ YA N+ AYRF+DLENK+I E D F E+KFPFK
Sbjct: 691 CLAYVRLTDPKIPKLGIRATTCAFLGYAINSAAYRFFDLENKIIFESGDAIFHEEKFPFK 750
Query: 486 SRNSGDLYSQISGGSISNSLPSIRIQTQDKEVDPEPRRSKRARTVKDFGEDFEMYNVED- 545
+NSG + + S S S +Q Q+ + E RRSKRAR KDFG D+ ++N+E+
Sbjct: 751 LKNSGGEENILLQPSSSTS----HLQNQE-NFEMELRRSKRARVEKDFGPDYYVFNIEEN 810
Query: 546 PKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
P++L EAL+S DA W+EA+N+EM+SL NRT
Sbjct: 811 PQNLKEALTSSDAIFWKEAVNDEMESLISNRT 836
BLAST of Cmc06g0169941 vs. ExPASy TrEMBL
Match:
Q0KIN7 (Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1)
HSP 1 Score: 582.0 bits (1499), Expect = 2.7e-162
Identity = 296/558 (53.05%), Postives = 389/558 (69.71%), Query Frame = 0
Query: 21 CYNCNKLGHLARNCRNKSR-PAAHANLIKDELVAMISKVNVIGGSEGWWLDTSASRHVCY 80
C+ C K GH+AR CR + R P AN+ ++ VA+I+ +N++ +GWW D+ A+RHVCY
Sbjct: 263 CFVCGKSGHIARFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCY 322
Query: 81 DLSLFRKYNEVKD-KNILLGDHHTTKVAGIGEVELKFTSGKMLVLKEFLHTPEIQKNLVS 140
D F+KY ++ K I+LGD HTT+V G G+VEL FTSG++L LK+ L+TP ++K L+S
Sbjct: 323 DKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMS 382
Query: 141 RYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLEINKIASSAYMLTSFNVWH 200
+LLNKAGF Q I S+ + + K +FV KGYA DGMFKLN+E+NK ++S YML+S N WH
Sbjct: 383 SFLLNKAGFKQIIESNQYVIVKKGIFVGKGYACDGMFKLNVEMNKTSTSVYMLSSTNFWH 442
Query: 201 VRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKTSHKYVTRVTEPLELIHSD 260
RLCH+N R + MS L LIP + +FEKC CS+AKITK H V R T+ LEL+H+D
Sbjct: 443 ARLCHINDRYVGIMSSLGLIPMIK-KNFEKCEACSKAKITKRPHFQVERKTDLLELVHTD 502
Query: 261 LCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMFKVFVTEIEKQFNKRIKRL 320
+CE G LTR RY ITFIDD S +T++YL+KNKSDA+E FK ++ E+E QF ++IKR+
Sbjct: 503 ICELGGILTRGGNRYFITFIDDFSKFTYVYLMKNKSDAFENFKTYLHEVENQFGRKIKRI 562
Query: 321 RSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKNRTLTELVIVILLESGAAP 380
RSDRG EY+S FN F S GIIHET PYSP NG AERKNRTL EL +L+ES A
Sbjct: 563 RSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGVAERKNRTLVELTNAMLIESHAPL 622
Query: 381 SWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRTWGCLAYVRIPDPKRRKLA 440
++WGE T YVLNR+P SK +P+E+ K P+L YLR WGCLA+VR+ DPK KL
Sbjct: 623 NFWGEAILTACYVLNRVPHKKSKLTPFELWKGYKPSLGYLRVWGCLAFVRLMDPKITKLG 682
Query: 441 SRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFPFKSRNSGDLYSQISGGSI 500
+ C F+ YA N+ AYRF++LE+ ++IE D F E+KFPF S+NSG +I +
Sbjct: 683 KKVTTCAFLGYASNSTAYRFFNLEDNIVIESGDAIFHENKFPFDSKNSGG--QRIEQNIL 742
Query: 501 SNSLPSIRIQT-QDKEV-DPEPRRSKRARTVKDFGEDFEMYNVEDPK-DLTEALSSVDAN 560
+LPS T ++KEV D E RRSKRAR KDFG DF ++NV D + L EALSS D+
Sbjct: 743 --TLPSSSTSTLKNKEVNDFELRRSKRARVEKDFGPDFYVFNVGDDRLTLKEALSSHDSI 802
Query: 561 LWQEAINNEMDSLEPNRT 574
W+EA+N+EM+SL N+T
Sbjct: 803 FWKEAVNDEMESLISNKT 815
BLAST of Cmc06g0169941 vs. ExPASy TrEMBL
Match:
Q60D13 (Putative gag and pol polyprotein, identical OS=Solanum demissum OX=50514 GN=SDM1_56t00010 PE=4 SV=1)
HSP 1 Score: 493.4 bits (1269), Expect = 1.3e-135
Identity = 271/576 (47.05%), Postives = 358/576 (62.15%), Query Frame = 0
Query: 5 SNKQNNPQSRSTVQI--VCYNCNKLGHLARNCRNKSR-PAAHANLIKDELVAMISKVNVI 64
+N +NN VQ C+ C K GH+AR CR + R P AN+ ++ VA+I+ +N++
Sbjct: 92 NNGENNQAQNQQVQDKGPCFVCGKSGHIARFCRFRKRGPNPQANVTEEPFVAVITDINMV 151
Query: 65 GGSEGWWLDTSASRHVCYDLSLFRKYNEVKD-KNILLGDHHTTKVAGIGEVELKFTSGKM 124
+GWW+D+ A+RHVCYD F+KY ++ K I+LGD HTT+V G G+VEL F+SG+
Sbjct: 152 ENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQVLGKGDVELCFSSGRE 211
Query: 125 LVLKEFLHTPEIQKNLVSRYLLNKAGFTQTIGSDLFTLTKNNVFVEKGYATDGMFKLNLE 184
L LK+ L+TP ++KNL+S +L NK GF Q I SD + + K +FV KG
Sbjct: 212 LTLKDVLYTPSMRKNLMSSFLFNKVGFKQIIESDQYVIVKKGIFVGKG------------ 271
Query: 185 INKIASSAYMLTSFNVWHVRLCHVNKRLISNMSRLNLIPKLSLHDFEKCACCSQAKITKT 244
L LIP + +FEKC CS+AKITK
Sbjct: 272 ----------------------------------LRLIPMIK-KNFEKCEACSKAKITKR 331
Query: 245 SHKYVTRVTEPLELIHSDLCEFDGALTRNSKRYVITFIDDCSDYTFIYLLKNKSDAYEMF 304
H V R T LEL+H+D+CE G LTR R ITFIDD S +T++YL+KNKSDA+E F
Sbjct: 332 PHFQVERKTNLLELVHTDICELGGILTRGGNRNFITFIDDFSKFTYVYLMKNKSDAFENF 391
Query: 305 KVFVTEIEKQFNKRIKRLRSDRGIEYDSVSFNEFYSSKGIIHETIAPYSPEMNGKAERKN 364
K ++ E+E QF ++IKR+RSDRG EY+S FN F S GIIHET PYSP NG AERKN
Sbjct: 392 KTYLHEVENQFGRKIKRIRSDRGREYESNEFNSFVRSLGIIHETTPPYSPSSNGAAERKN 451
Query: 365 RTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTSPYEVLKHKAPNLSYLRT 424
RTL EL +L+ES A ++WGE T YVLNR+P SK + +E+ K P+L YLR
Sbjct: 452 RTLVELTNAMLIESHAPLNFWGETILTACYVLNRVPHKKSKLTHFELWKGYKPSLGYLRV 511
Query: 425 WGCLAYVRIPDPKRRKLASRAYECVFIEYAKNNKAYRFYDLENKVIIEWNDVDFFEDKFP 484
WGCLA+VR+ DPK KL + C F+ YA N+ AYRF++LE+ ++IE D F E+KFP
Sbjct: 512 WGCLAFVRLMDPKITKLGKKVTTCAFLGYASNSTAYRFFNLEDNIVIESGDAIFHENKFP 571
Query: 485 FKSRNSGDLYSQISGGSISNSLPSIRIQT-QDKEV-DPEPRRSKRARTVKDFGEDFEMYN 544
F S+NSG +I + SLPS T ++KEV D E RRSKRAR KDFG +F ++N
Sbjct: 572 FDSKNSGG--QRIEQNIL--SLPSSSTSTLKNKEVNDFELRRSKRARIEKDFGPNFYVFN 616
Query: 545 V-EDPKDLTEALSSVDANLWQEAINNEMDSLEPNRT 574
V +DP L EALSS D+ W+EA+N+EM+SL N+T
Sbjct: 632 VGDDPLTLKEALSSHDSIFWKEAVNDEMESLISNKT 616
BLAST of Cmc06g0169941 vs. TAIR 10
Match:
ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 47.8 bits (112), Expect = 3.5e-05
Identity = 26/85 (30.59%), Postives = 42/85 (49.41%), Query Frame = 0
Query: 360 NRTLTELVIVILLESGAAPSWWGEIFKTINYVLNRIPKSNSKTS-PYEVLKHKAPNLSYL 419
NRT+ E V +L E G ++ + T +++N+ P + P EV P SYL
Sbjct: 2 NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61
Query: 420 RTWGCLAYVRIPDPKRRKLASRAYE 444
R +GC+AY+ + K + A + E
Sbjct: 62 RRFGCVAYIHCDEGKLKPRAKKGEE 86
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0034938.1 | 4.7e-302 | 89.88 | putative Polyprotein [Cucumis melo var. makuwa] >TYK21293.1 putative Polyprotein... | [more] |
| ABI34306.1 | 5.5e-162 | 53.05 | Polyprotein, putative [Solanum demissum] | [more] |
| KAG5527251.1 | 3.1e-136 | 45.23 | hypothetical protein RHGRI_028223 [Rhododendron griersonianum] | [more] |
| AAU90333.1 | 2.6e-135 | 47.05 | Putative gag and pol polyprotein, identical [Solanum demissum] | [more] |
| XP_021732277.1 | 5.4e-133 | 47.40 | uncharacterized protein LOC110699091 [Chenopodium quinoa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| P10978 | 4.4e-69 | 28.86 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
| P04146 | 7.3e-48 | 26.95 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
| Q94HW2 | 1.3e-44 | 29.44 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
| Q9ZT94 | 2.0e-42 | 27.00 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
| P47024 | 5.3e-14 | 20.68 | Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3DCJ1 | 2.3e-302 | 89.88 | Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119... | [more] |
| A0A7N2L531 | 4.7e-175 | 56.47 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
| A0A7N2R9F3 | 1.4e-171 | 55.59 | Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1 | [more] |
| Q0KIN7 | 2.7e-162 | 53.05 | Polyprotein, putative OS=Solanum demissum OX=50514 GN=SDM1_27t00018 PE=4 SV=1 | [more] |
| Q60D13 | 1.3e-135 | 47.05 | Putative gag and pol polyprotein, identical OS=Solanum demissum OX=50514 GN=SDM1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| ATMG00710.1 | 3.5e-05 | 30.59 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
