Cmc06g0168101 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0168101
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr06: 21692197 .. 21693907 (-)
RNA-Seq Expression	Cmc06g0168101
Synteny	Cmc06g0168101

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCCAGACAAGGATAATCAGACCCAGCCATAGCCCTTTCTCAAGTCCCGTGCTGCTGGTAAAGAAGAAAGATGGTGGATGGAGGTTTTGTGTGGATTACCGAAAATTGAACAAAATCACAATAGCGGATAAATTCCCCATACCAGTGATTGAAGAATTACTAGATGAACTAAATCGGGCCACTGTTTTTTCAAAATTGGACCTAAAATCTGGTTATCACCTTATCAGAATGAAAGAAGAGAATATTGAGAAGATTGCGTTTCGAACACACGAGGGCCACTATGAATTCCTGGTCATGCCATTTGGACTGACGAATGCCCCGGCCACTTTCCAGTCTCTCATGAACCAGATATTTAAACCCTTCCTCAGACGCTGTGTACTGGTTTTTTTTTATGATATACTCATTTACAGTTCAGACATAACTGAGCATGAGAAGCACTTAGGAATGGTGTTTGCAGTATTGAGGGATAACCAGTTGTATGCTAATAGAAAAAAAATGTGTGTTTGCCCATTCCCAAATACAATATTTAGGCCATAACATATCCAAAAAAGGGGTGGAAGCAGATCCGGAGAAAGTACGAAGCATGTTACAATGGCCCCAACCTAAGGATATAACTGGGTAAAGAGGATTTTTAGGGCTGACTGGGTATTATAGACGTTTTGTCAAAGGTTATGGAGATATCGCAGCCCCCTTGACCAAATTGTTGCAGAAAAACTCTTTTAAATGGGATGAAGAAGCCACTCTTGCTTTTGAGAATTTGAAACTGGCTATGACCACAATACCTGTGCCAGCACTTCCCAATTGGTCCCTGCCCTTCATGGTAGAAACTGATGCGTCAGGCAGCGGATTAGGAGCAGTACTATCACAGAACGGCCACCCCATCGCGTTCTTTAGCCAAAAGCTATCGCCAAGGGCCCAATCCAAATCGATCTACGAAAGAGAATTGATGGCAGTAGTGTTGTCAGTACAGAAATGGCGACATTATCTTTTGGGAAGAAAGTTCACCATGATGTCGGATCAAAAAGCTTTGAAGTTTCTGCTGGAACAGAGAGAGGTTCAACCACAGTTCCAAAAATGGTTAACCAAGCTTTTGGGGTATGATTTTGAGATTATGTACCAACCCGGACTCCAAAATAAGGCAGCCGATGCACTTTCAAGGGTGGAGAACTCACCGGAGCTGAATACAATGTCAACATCTGGCATTGTGGATATGGAAATAGTTACCAAAGAAGTTGAGAAAGATGAAGAACTCCAACAACTAACGCTGCAACTTCAATCTGACCACCCACCTGAAGGAAAGTACTCATTGGTCAACAGCAAGCTACTGTACAAGGGACGAGTAGTGTTATCTAAATCATCATCTCTCATACCGAGCCTTTTGCACACATTCCATGACTCTATTTTTAGAGGCCATTCAAGTTTCCTAAGAACCTACAAACGAATGAGTGGTGAGCTTTATTGGAAGGGAATGAAGGCAGACATTAAGAGCTATGTAGAGCAATGCGAGATATGTCAAAGAAATAAGTATGAAGCTACCAAGCCAGCAGGGGTTCTTCAGCCGCTACCCATACCGGAAAGAATTTTGGAAGACTGGACTATGGACTTCATAGAAGGACTTCCTAAAGCAGGGGGCATGAATGTAATTATGGTAGTGGTAGATCGATTAAGCAAATATGCTTATTTCATCACCTTGAAACACTCATTTTAA

mRNA sequence

ATGCTCCAGACAAGGATAATCAGACCCAGCCATAGCCCTTTCTCAAGTCCCGTGCTGCTGGTAAAGAAGAAAGATGGTGGATGGAGGTTTTGTGTGGATTACCGAAAATTGAACAAAATCACAATAGCGGATAAATTCCCCATACCAGTGATTGAAGAATTACTAGATGAACTAAATCGGGCCACTGTTTTTTCAAAATTGGACCTAAAATCTGGTTATCACCTTATCAGAATGAAAGAAGAGAATATTGAGAAGATTGCGTTTCGAACACACGAGGGCCACTATGAATTCCTGGTCATGCCATTTGGACTGACGAATGCCCCGGCCACTTTCCAGTCTCTCATGAACCAGATATTTAAACCCTTCCTCAGACGCTGTGTACTGGTTTTTTTTTATGATATACTCATTTACAGTTCAGACATAACTGAGCATGAGAAGCACTTAGGAATGGTGTTTGCAGTATTGAGGGATAACCAGTTGTATGCTAATAGAAAAAAAATGTGGCTGACTGGGTATTATAGACGTTTTGTCAAAGGTTATGGAGATATCGCAGCCCCCTTGACCAAATTGTTGCAGAAAAACTCTTTTAAATGGGATGAAGAAGCCACTCTTGCTTTTGAGAATTTGAAACTGGCTATGACCACAATACCTGTGCCAGCACTTCCCAATTGGTCCCTGCCCTTCATGGTAGAAACTGATGCGTCAGGCAGCGGATTAGGAGCAGTACTATCACAGAACGGCCACCCCATCGCGTTCTTTAGCCAAAAGCTATCGCCAAGGGCCCAATCCAAATCGATCTACGAAAGAGAATTGATGGCAGTAGTGTTGTCAGTACAGAAATGGCGACATTATCTTTTGGGAAGAAAGTTCACCATGATGTCGGATCAAAAAGCTTTGAAGTTTCTGCTGGAACAGAGAGAGGTTCAACCACAGTTCCAAAAATGGTTAACCAAGCTTTTGGGGTATGATTTTGAGATTATGTACCAACCCGGACTCCAAAATAAGGCAGCCGATGCACTTTCAAGGGTGGAGAACTCACCGGAGCTGAATACAATGTCAACATCTGGCATTGTGGATATGGAAATAGTTACCAAAGAAGTTGAGAAAGATGAAGAACTCCAACAACTAACGCTGCAACTTCAATCTGACCACCCACCTGAAGGAAAGTACTCATTGGTCAACAGCAAGCTACTGTACAAGGGACGAGTAGTGTTATCTAAATCATCATCTCTCATACCGAGCCTTTTGCACACATTCCATGACTCTATTTTTAGAGGCCATTCAAGTTTCCTAAGAACCTACAAACGAATGAGTGGTGAGCTTTATTGGAAGGGAATGAAGGCAGACATTAAGAGCTATGTAGAGCAATGCGAGATATGTCAAAGAAATAAGTATGAAGCTACCAAGCCAGCAGGGGTTCTTCAGCCGCTACCCATACCGGAAAGAATTTTGGAAGACTGGACTATGGACTTCATAGAAGGACTTCCTAAAGCAGGGGGCATGAATGTAATTATGGTAGTGGTAGATCGATTAAGCAAATATGCTTATTTCATCACCTTGAAACACTCATTTTAA

Coding sequence (CDS)

ATGCTCCAGACAAGGATAATCAGACCCAGCCATAGCCCTTTCTCAAGTCCCGTGCTGCTGGTAAAGAAGAAAGATGGTGGATGGAGGTTTTGTGTGGATTACCGAAAATTGAACAAAATCACAATAGCGGATAAATTCCCCATACCAGTGATTGAAGAATTACTAGATGAACTAAATCGGGCCACTGTTTTTTCAAAATTGGACCTAAAATCTGGTTATCACCTTATCAGAATGAAAGAAGAGAATATTGAGAAGATTGCGTTTCGAACACACGAGGGCCACTATGAATTCCTGGTCATGCCATTTGGACTGACGAATGCCCCGGCCACTTTCCAGTCTCTCATGAACCAGATATTTAAACCCTTCCTCAGACGCTGTGTACTGGTTTTTTTTTATGATATACTCATTTACAGTTCAGACATAACTGAGCATGAGAAGCACTTAGGAATGGTGTTTGCAGTATTGAGGGATAACCAGTTGTATGCTAATAGAAAAAAAATGTGGCTGACTGGGTATTATAGACGTTTTGTCAAAGGTTATGGAGATATCGCAGCCCCCTTGACCAAATTGTTGCAGAAAAACTCTTTTAAATGGGATGAAGAAGCCACTCTTGCTTTTGAGAATTTGAAACTGGCTATGACCACAATACCTGTGCCAGCACTTCCCAATTGGTCCCTGCCCTTCATGGTAGAAACTGATGCGTCAGGCAGCGGATTAGGAGCAGTACTATCACAGAACGGCCACCCCATCGCGTTCTTTAGCCAAAAGCTATCGCCAAGGGCCCAATCCAAATCGATCTACGAAAGAGAATTGATGGCAGTAGTGTTGTCAGTACAGAAATGGCGACATTATCTTTTGGGAAGAAAGTTCACCATGATGTCGGATCAAAAAGCTTTGAAGTTTCTGCTGGAACAGAGAGAGGTTCAACCACAGTTCCAAAAATGGTTAACCAAGCTTTTGGGGTATGATTTTGAGATTATGTACCAACCCGGACTCCAAAATAAGGCAGCCGATGCACTTTCAAGGGTGGAGAACTCACCGGAGCTGAATACAATGTCAACATCTGGCATTGTGGATATGGAAATAGTTACCAAAGAAGTTGAGAAAGATGAAGAACTCCAACAACTAACGCTGCAACTTCAATCTGACCACCCACCTGAAGGAAAGTACTCATTGGTCAACAGCAAGCTACTGTACAAGGGACGAGTAGTGTTATCTAAATCATCATCTCTCATACCGAGCCTTTTGCACACATTCCATGACTCTATTTTTAGAGGCCATTCAAGTTTCCTAAGAACCTACAAACGAATGAGTGGTGAGCTTTATTGGAAGGGAATGAAGGCAGACATTAAGAGCTATGTAGAGCAATGCGAGATATGTCAAAGAAATAAGTATGAAGCTACCAAGCCAGCAGGGGTTCTTCAGCCGCTACCCATACCGGAAAGAATTTTGGAAGACTGGACTATGGACTTCATAGAAGGACTTCCTAAAGCAGGGGGCATGAATGTAATTATGGTAGTGGTAGATCGATTAAGCAAATATGCTTATTTCATCACCTTGAAACACTCATTTTAA

Protein sequence

MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKPFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKKMWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFITLKHSF

Homology

[Close]

BLAST of Cmc06g0168101 vs. NCBI nr
Match: TYK28944.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. NCBI nr
Match: TYJ96663.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. NCBI nr
Match: TYK27058.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. NCBI nr
Match: TYK27963.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 912.5 bits (2357), Expect = 1.6e-261
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-74
Identity = 185/586 (31.57%), Postives = 292/586 (49.83%), Query Frame = 0


Query: 2    LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRA 61
            L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +
Sbjct: 436  LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 62   TVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKP 121
            T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP+G++ APA FQ  +N I   
Sbjct: 496  TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 122  FLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK--------------- 181
                 V+ +  DILI+S   +EH KH+  V   L++  L  N+ K               
Sbjct: 556  AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 182  ------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-S 241
                                          +    Y R+F+     +  PL  LL+K+  
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 242  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI 301
            +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 302  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQR 361
             ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E  
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795

Query: 362  EVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPE-------------LNTMS 421
                +  +W   L  ++FEI Y+PG  N  ADALSR+ +  E             +N +S
Sbjct: 796  PENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQIS 855

Query: 422  TSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLI 481
             +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L 
Sbjct: 856  ITDDFKNQVVT---EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 915

Query: 482  PSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAG 519
             +++  +H+     H         +     WKG++  I+ YV+ C  CQ NK    KP G
Sbjct: 916  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 975

[Close]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-74
Identity = 185/586 (31.57%), Postives = 292/586 (49.83%), Query Frame = 0


Query: 2    LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRA 61
            L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +
Sbjct: 436  LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 62   TVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKP 121
            T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP+G++ APA FQ  +N I   
Sbjct: 496  TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 122  FLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK--------------- 181
                 V+ +  DILI+S   +EH KH+  V   L++  L  N+ K               
Sbjct: 556  AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 182  ------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-S 241
                                          +    Y R+F+     +  PL  LL+K+  
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 242  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI 301
            +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 302  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQR 361
             ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E  
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795

Query: 362  EVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPE-------------LNTMS 421
                +  +W   L  ++FEI Y+PG  N  ADALSR+ +  E             +N +S
Sbjct: 796  PENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQIS 855

Query: 422  TSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLI 481
             +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L 
Sbjct: 856  ITDDFKNQVVT---EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 915

Query: 482  PSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAG 519
             +++  +H+     H         +     WKG++  I+ YV+ C  CQ NK    KP G
Sbjct: 916  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 975

[Close]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-74
Identity = 185/586 (31.57%), Postives = 292/586 (49.83%), Query Frame = 0


Query: 2    LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRA 61
            L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +
Sbjct: 436  LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 62   TVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKP 121
            T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP+G++ APA FQ  +N I   
Sbjct: 496  TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 122  FLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK--------------- 181
                 V+ +  DILI+S   +EH KH+  V   L++  L  N+ K               
Sbjct: 556  AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 182  ------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-S 241
                                          +    Y R+F+     +  PL  LL+K+  
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 242  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI 301
            +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 302  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQR 361
             ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E  
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795

Query: 362  EVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPE-------------LNTMS 421
                +  +W   L  ++FEI Y+PG  N  ADALSR+ +  E             +N +S
Sbjct: 796  PENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQIS 855

Query: 422  TSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLI 481
             +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L 
Sbjct: 856  ITDDFKNQVVT---EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 915

Query: 482  PSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAG 519
             +++  +H+     H         +     WKG++  I+ YV+ C  CQ NK    KP G
Sbjct: 916  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 975

[Close]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-74
Identity = 185/586 (31.57%), Postives = 292/586 (49.83%), Query Frame = 0


Query: 2    LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRA 61
            L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +
Sbjct: 436  LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 62   TVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKP 121
            T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP+G++ APA FQ  +N I   
Sbjct: 496  TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 122  FLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK--------------- 181
                 V+ +  DILI+S   +EH KH+  V   L++  L  N+ K               
Sbjct: 556  AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 182  ------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-S 241
                                          +    Y R+F+     +  PL  LL+K+  
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 242  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI 301
            +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 302  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQR 361
             ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E  
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795

Query: 362  EVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPE-------------LNTMS 421
                +  +W   L  ++FEI Y+PG  N  ADALSR+ +  E             +N +S
Sbjct: 796  PENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQIS 855

Query: 422  TSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLI 481
             +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L 
Sbjct: 856  ITDDFKNQVVT---EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 915

Query: 482  PSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAG 519
             +++  +H+     H         +     WKG++  I+ YV+ C  CQ NK    KP G
Sbjct: 916  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 975

[Close]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-74
Identity = 185/586 (31.57%), Postives = 292/586 (49.83%), Query Frame = 0


Query: 2    LQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNRA 61
            L++ IIR S +  + PV+ V KK+G  R  VDY+ LNK    + +P+P+IE+LL ++  +
Sbjct: 436  LKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGS 495

Query: 62   TVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFKP 121
            T+F+KLDLKS YHLIR+++ +  K+AFR   G +E+LVMP+G++ APA FQ  +N I   
Sbjct: 496  TIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGE 555

Query: 122  FLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK--------------- 181
                 V+ +  DILI+S   +EH KH+  V   L++  L  N+ K               
Sbjct: 556  AKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHI 615

Query: 182  ------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKN-S 241
                                          +    Y R+F+     +  PL  LL+K+  
Sbjct: 616  SEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVR 675

Query: 242  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNG-----HPI 301
            +KW    T A EN+K  + + PV    ++S   ++ETDAS   +GAVLSQ       +P+
Sbjct: 676  WKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPV 735

Query: 302  AFFSQKLSPRAQSKSIYERELMAVVLSVQKWRHYLLG--RKFTMMSDQKAL--KFLLEQR 361
             ++S K+S    + S+ ++E++A++ S++ WRHYL      F +++D + L  +   E  
Sbjct: 736  GYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESE 795

Query: 362  EVQPQFQKWLTKLLGYDFEIMYQPGLQNKAADALSRVENSPE-------------LNTMS 421
                +  +W   L  ++FEI Y+PG  N  ADALSR+ +  E             +N +S
Sbjct: 796  PENKRLARWQLFLQDFNFEINYRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQIS 855

Query: 422  TSGIVDMEIVTKEVEKDEELQQLTLQLQSDHPPEGKYSLVNSKLL-YKGRVVLSKSSSLI 481
             +     ++VT   E   + + L L    D   E    L +  L+  K +++L   + L 
Sbjct: 856  ITDDFKNQVVT---EYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLT 915

Query: 482  PSLLHTFHDSIFRGHSSFLRTYKRMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAG 519
             +++  +H+     H         +     WKG++  I+ YV+ C  CQ NK    KP G
Sbjct: 916  RTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYG 975

[Close]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL
Match: A0A5D3BBH7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00100 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL
Match: A0A5D3DZK6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00310 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL
Match: A0A5D3DWA9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001670 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL
Match: A0A5D3DU86 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold95G00470 PE=4 SV=1)

HSP 1 Score: 912.5 bits (2357), Expect = 7.9e-262
Identity = 462/569 (81.20%), Postives = 493/569 (86.64%), Query Frame = 0


Query: 1    MLQTRIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELNR 60
            MLQT IIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDEL+ 
Sbjct: 618  MLQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHG 677

Query: 61   ATVFSKLDLKSGYHLIRMKEENIEKIAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFK 120
            ATVFSKLDLKSGYH IRM+EE+IEK AFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+FK
Sbjct: 678  ATVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFK 737

Query: 121  PFLRRCVLVFFYDILIYSSDITEHEKHLGMVFAVLRDNQLYANRKK-------------- 180
            PFLRRCVLVFF DIL+YSSDITEHEKHLGMVFA LRDNQLYANRKK              
Sbjct: 738  PFLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHV 797

Query: 181  -------------------------------MWLTGYYRRFVKGYGDIAAPLTKLLQKNS 240
                                           + LTGYYRRFVKGYG+IAAPLTKLLQKN+
Sbjct: 798  ISKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNA 857

Query: 241  FKWDEEATLAFENLKLAMTTIPVPALPNWSLPFMVETDASGSGLGAVLSQNGHPIAFFSQ 300
            FKWDE ATLAFE+LK AM+TIPV ALP+WSLPFM+ETDASGSGLGAVLSQN HPIAFFSQ
Sbjct: 858  FKWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQ 917

Query: 301  KLSPRAQSKSIYERELMAVVLSVQKWRHYLLGRKFTMMSDQKALKFLLEQREVQPQFQKW 360
            KLS RAQ+KSIYERELMAVVLSVQKWRHYLLGR+FT+MSDQKALKFLLEQREVQPQFQKW
Sbjct: 918  KLSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKW 977

Query: 361  LTKLLGYDFEIMYQPGLQNKAADALSRVENSPELNTMSTSGIVDMEIVTKEVEKDEELQQ 420
            LTKLLGYDFEI+YQPGLQNKAADALSR+++S EL  +ST+GIVDME+VTKEVEKDEELQ 
Sbjct: 978  LTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQL 1037

Query: 421  LTLQLQSDHPPEGKYSLVNSKLLYKGRVVLSKSSSLIPSLLHTFHDSIFRGHSSFLRTYK 480
            L  QLQ++   EGKYSL N  L+YKGRVVLSKSSS+IPSLLHTFHDSI  GHS FLRTYK
Sbjct: 1038 LIQQLQNNPALEGKYSLTNGTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYK 1097

Query: 481  RMSGELYWKGMKADIKSYVEQCEICQRNKYEATKPAGVLQPLPIPERILEDWTMDFIEGL 525
            RMSGEL+WKGMK DIK YVEQCEICQRNK EATKPAGVLQPLPIP+RILEDWTMDFIEGL
Sbjct: 1098 RMSGELFWKGMKEDIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGL 1157

[Close]

BLAST of Cmc06g0168101 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 2.8e-17
Identity = 53/130 (40.77%), Postives = 63/130 (48.46%), Query Frame = 0


Query: 147 HLGMVFAVLRDNQLYANRKK---------------------------------------- 206
           HLGMV  +   +Q YANRKK                                        
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 207 -------MWLTGYYRRFVKGYGDIAAPLTKLLQKNSFKWDEEATLAFENLKLAMTTIPVP 230
                  + LTGYYRRFVK YG I  PLT+LL+KNS KW E A LAF+ LK A+TT+PV 
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

[Close]

BLAST of Cmc06g0168101 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 2.9e-06
Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 0


Query: 1  MLQTRIIRPSHSPFSSPVLLVKKKDGGW 29
          ML+ RII+PS SP+SSPVLLV+KKDGGW
Sbjct: 52 MLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc06g0168101 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28944.1	1.6e-261	81.20	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96663.1	1.6e-261	81.20	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK21035.1	1.6e-261	81.20	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp...	[more]
TYK27058.1	1.6e-261	81.20	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK27963.1	1.6e-261	81.20	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0168101 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	2.4e-74	31.57	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	2.4e-74	31.57	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	2.4e-74	31.57	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	2.4e-74	31.57	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	2.4e-74	31.57	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0168101 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E325	7.9e-262	81.20	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BBH7	7.9e-262	81.20	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DZK6	7.9e-262	81.20	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DWA9	7.9e-262	81.20	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DU86	7.9e-262	81.20	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc06g0168101 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.8e-17	40.77	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	2.9e-06	78.57	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 224..292 e-value: 3.2E-9 score: 38.6
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..106 e-value: 1.7E-69 score: 235.4
None	No IPR available	GENE3D	1.10.340.70		coord: 374..464 e-value: 2.0E-15 score: 58.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 174..522 coord: 1..131
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 174..522 coord: 1..131
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 230..342 e-value: 1.94048E-50 score: 166.899
None	No IPR available	CDD	cd01647	RT_LTR	coord: 6..167 e-value: 5.92104E-84 score: 255.983
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 46..167 e-value: 1.7E-69 score: 235.4
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 409..465 e-value: 7.1E-17 score: 61.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 474..523 e-value: 3.8E-6 score: 28.3
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 198..291 e-value: 3.3E-30 score: 104.0
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 21..170 e-value: 2.0E-23 score: 83.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 2..211 score: 13.159908
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 474..524 score: 9.242762
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 474..521
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0168101.1	Cmc06g0168101.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003676	nucleic acid binding