Cmc06g0167281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc06g0167281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr06: 20362686 .. 20363705 (-)
RNA-Seq Expression	Cmc06g0167281
Synteny	Cmc06g0167281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGATTTTGATTTGATTTTAGGCACGGATTGGCTGTCGGCTAACCATGCAAGTATAGATTGTTTTGGTAAGGAAGTCGTTTTTAACCCTCTCTCTGGGCCTAGTTTCAAATTTAGGGGGGCAGGCATTATATGTATACCTAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCCGTGGTAAGGGAGTACCCCGATGTTTTCCCCGACAAGCTTCCAGGAATTTTGCCTCTCAGAGAGATAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCTTATCTCGAGGGCCCCTTACAAAATGGCTCCAGCCGAGCTGAAGGAGCTGAAGGTACAACTACAAGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGTCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACGACCAAGAATCGTTACCCCTTGCTCGGGATTGATGACTTGTTCGATCAATTACAGGGAGCCACCGTCTTTTCTAAGATCGATTTGCGATCAAGCTATCACCAGTTGAGGATCAGGGATAGCGACATTCCTAAGACCGCTTTTCGTTCCAAATACGGGCACTATGAGTTCATTGTGATGTCGTTTGGGTTGACTAATGCTCCTGTGGTATTCATGGACTTGATGAACATGGTGTTTAAGGATTTCTTAGACTCGTTCCCCATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGGGCATTTGCACCAGATTTTGGAGAATCTTCGAGCCAATAAGCTGTATGCCAAGTTCTCCAACTGTCAATTTTGGCTGAAGACGGTGACTTTCCTCGGCCACGTGGTTTCCAATGAAGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTAG

mRNA sequence

ATGCGTGATTTTGATTTGATTTTAGGCACGGATTGGCTGTCGGCTAACCATGCAAGTATAGATTGTTTTGGTAAGGAAGTCGTTTTTAACCCTCTCTCTGGGCCTAGTTTCAAATTTAGGGGGGCAGGCATTATATGTATACCTAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCCGTGGTAAGGGAGTACCCCGATGTTTTCCCCGACAAGCTTCCAGGAATTTTGCCTCTCAGAGAGATAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCTTATCTCGAGGGCCCCTTACAAAATGGCTCCAGCCGAGCTGAAGGAGCTGAAGGTACAACTACAAGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGTCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACGACCAAGAATCGTTACCCCTTGCTCGGGATTGATGACTTGTTCGATCAATTACAGGGAGCCACCGTCTTTTCTAAGATCGATTTGCGATCAAGCTATCACCAGTTGAGGATCAGGGATAGCGACATTCCTAAGACCGCTTTTCGTTCCAAATACGGGCACTATGAGTTCATTGTGATGTCGTTTGGGTTGACTAATGCTCCTGTGGTATTCATGGACTTGATGAACATGGTGTTTAAGGATTTCTTAGACTCGTTCCCCATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGGGCATTTGCACCAGATTTTGGAGAATCTTCGAGCCAATAAGCTGTATGCCAAGTTCTCCAACTGTCAATTTTGGCTGAAGACGGTGACTTTCCTCGGCCACGTGGTTTCCAATGAAGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTAG

Coding sequence (CDS)

ATGCGTGATTTTGATTTGATTTTAGGCACGGATTGGCTGTCGGCTAACCATGCAAGTATAGATTGTTTTGGTAAGGAAGTCGTTTTTAACCCTCTCTCTGGGCCTAGTTTCAAATTTAGGGGGGCAGGCATTATATGTATACCTAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTAGATACCAGAGAACCAGAAGTTTCCCTGTCCTCCGAACCCGTGGTAAGGGAGTACCCCGATGTTTTCCCCGACAAGCTTCCAGGAATTTTGCCTCTCAGAGAGATAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCTCTTATCTCGAGGGCCCCTTACAAAATGGCTCCAGCCGAGCTGAAGGAGCTGAAGGTACAACTACAAGAGTTGCTGGACAAGGGTTTCATCCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAGGATGGGTCGATGCGTCTTTGCATTGACTACAGAGAGCTGAACAAGGTGACGACCAAGAATCGTTACCCCTTGCTCGGGATTGATGACTTGTTCGATCAATTACAGGGAGCCACCGTCTTTTCTAAGATCGATTTGCGATCAAGCTATCACCAGTTGAGGATCAGGGATAGCGACATTCCTAAGACCGCTTTTCGTTCCAAATACGGGCACTATGAGTTCATTGTGATGTCGTTTGGGTTGACTAATGCTCCTGTGGTATTCATGGACTTGATGAACATGGTGTTTAAGGATTTCTTAGACTCGTTCCCCATAGTTTTCATTGACGACATTTTGATTTACTCCAAGACTGAGGCTGAGCATGAGGGGCATTTGCACCAGATTTTGGAGAATCTTCGAGCCAATAAGCTGTATGCCAAGTTCTCCAACTGTCAATTTTGGCTGAAGACGGTGACTTTCCTCGGCCACGTGGTTTCCAATGAAGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACCAATTAG

Protein sequence

MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLLSQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIVMSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANKLYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN

Homology

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BLAST of Cmc06g0167281 vs. NCBI nr
Match: KAA0025998.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 473 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 532

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 533 SQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 592

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 593 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 652

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 653 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 712

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 811

[Close]

BLAST of Cmc06g0167281 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 564

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 625 VTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 684

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 783

[Close]

BLAST of Cmc06g0167281 vs. NCBI nr
Match: KAA0033486.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 622.5 bits (1604), Expect = 2.2e-174
Identity = 306/339 (90.27%), Postives = 319/339 (94.10%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 473 MQDFDMILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 532

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 533 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 592

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 593 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 652

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KN YPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRDSDIPKTAFRS+YGHYEF+V
Sbjct: 653 VTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFVV 712

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS EGVSVDPAKIEAVTN
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSREGVSVDPAKIEAVTN 811

[Close]

BLAST of Cmc06g0167281 vs. NCBI nr
Match: TYK01306.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 622.5 bits (1604), Expect = 2.2e-174
Identity = 306/339 (90.27%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 433 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 492

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 493 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 552

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 553 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 612

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRDSDIPKTAFR +YGHYEFIV
Sbjct: 613 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIV 672

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 771

[Close]

BLAST of Cmc06g0167281 vs. NCBI nr
Match: KAA0045309.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 621.3 bits (1601), Expect = 4.9e-174
Identity = 304/339 (89.68%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 11  MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 70

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P +E+DFAIELEPGTA I
Sbjct: 71  SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFAIELEPGTAPI 130

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 131 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 190

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 191 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 250

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           +SFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 251 ISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 349

[Close]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-42
Identity = 104/298 (34.90%), Postives = 158/298 (53.02%), Query Frame = 0


Query: 55  KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDKLP------ 114
           +AS L   G +  + S + + EP  +  S           + ++Y ++  + LP      
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADI 579

Query: 115 GILPLREIDFAIELEPGTALISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV 174
             +P++     IE++PG  L    PY +     +E+   +Q+LLD  FI PS SP  +PV
Sbjct: 580 NNIPVKH---DIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPV 639

Query: 175 LFVKKKDGSMRLCIDYRELNKVTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRI 234
           + V KKDG+ RLC+DYR LNK T  + +PL  ID+L  ++  A +F+ +DL S YHQ+ +
Sbjct: 640 VLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPM 699

Query: 235 RDSDIPKTAFRSKYGHYEFIVMSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYS 294
              D  KTAF +  G YE+ VM FGL NAP  F   M   F+D    F  V++DDILI+S
Sbjct: 700 EPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFS 759

Query: 295 KTEAEHEGHLHQILENLRANKLYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAV 338
           ++  EH  HL  +LE L+   L  K   C+F  +   FLG+ +  + ++    K  A+
Sbjct: 760 ESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAI 812

[Close]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 3.5e-42
Identity = 104/298 (34.90%), Postives = 158/298 (53.02%), Query Frame = 0


Query: 55  KASKLLSQGTWGILASVVDTREPEVSLSSEP---------VVREYPDVFPDKLP------ 114
           +AS L   G +  + S + + EP  +  S           + ++Y ++  + LP      
Sbjct: 546 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADI 605

Query: 115 GILPLREIDFAIELEPGTALISRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPV 174
             +P++     IE++PG  L    PY +     +E+   +Q+LLD  FI PS SP  +PV
Sbjct: 606 NNIPVKH---DIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPV 665

Query: 175 LFVKKKDGSMRLCIDYRELNKVTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRI 234
           + V KKDG+ RLC+DYR LNK T  + +PL  ID+L  ++  A +F+ +DL S YHQ+ +
Sbjct: 666 VLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPM 725

Query: 235 RDSDIPKTAFRSKYGHYEFIVMSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYS 294
              D  KTAF +  G YE+ VM FGL NAP  F   M   F+D    F  V++DDILI+S
Sbjct: 726 EPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFS 785

Query: 295 KTEAEHEGHLHQILENLRANKLYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAV 338
           ++  EH  HL  +LE L+   L  K   C+F  +   FLG+ +  + ++    K  A+
Sbjct: 786 ESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAI 838

[Close]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-41
Identity = 88/267 (32.96%), Postives = 156/267 (58.43%), Query Frame = 0


Query: 75  REPEVSLSSEPVVREYPDVF----PDKLPGILPLREIDFAIELEPGTALISRAPYKMAPA 134
           +EPE+      + +E+ D+      +KLP   P++ ++F +EL      +    Y + P 
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPG 429

Query: 135 ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLL 194
           +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPL 
Sbjct: 430 KMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 489

Query: 195 GIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIVMSFGLTNAPV 254
            I+ L  ++QG+T+F+K+DL+S+YH +R+R  D  K AFR   G +E++VM +G++ AP 
Sbjct: 490 LIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPA 549

Query: 255 VFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANKLYAKFSNCQF 314
            F   +N +  +  +S  + ++DDILI+SK+E+EH  H+  +L+ L+   L    + C+F
Sbjct: 550 HFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 609

Query: 315 WLKTVTFLGHVVSNEGVSVDPAKIEAV 338
               V F+G+ +S +G +     I+ V
Sbjct: 610 HQSQVKFIGYHISEKGFTPCQENIDKV 630

[Close]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-41
Identity = 88/267 (32.96%), Postives = 156/267 (58.43%), Query Frame = 0


Query: 75  REPEVSLSSEPVVREYPDVF----PDKLPGILPLREIDFAIELEPGTALISRAPYKMAPA 134
           +EPE+      + +E+ D+      +KLP   P++ ++F +EL      +    Y + P 
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPG 429

Query: 135 ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLL 194
           +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPL 
Sbjct: 430 KMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 489

Query: 195 GIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIVMSFGLTNAPV 254
            I+ L  ++QG+T+F+K+DL+S+YH +R+R  D  K AFR   G +E++VM +G++ AP 
Sbjct: 490 LIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPA 549

Query: 255 VFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANKLYAKFSNCQF 314
            F   +N +  +  +S  + ++DDILI+SK+E+EH  H+  +L+ L+   L    + C+F
Sbjct: 550 HFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 609

Query: 315 WLKTVTFLGHVVSNEGVSVDPAKIEAV 338
               V F+G+ +S +G +     I+ V
Sbjct: 610 HQSQVKFIGYHISEKGFTPCQENIDKV 630

[Close]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.9e-41
Identity = 88/267 (32.96%), Postives = 156/267 (58.43%), Query Frame = 0


Query: 75  REPEVSLSSEPVVREYPDVF----PDKLPGILPLREIDFAIELEPGTALISRAPYKMAPA 134
           +EPE+      + +E+ D+      +KLP   P++ ++F +EL      +    Y + P 
Sbjct: 370 KEPEL----PDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYPLPPG 429

Query: 135 ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTTKNRYPLL 194
           +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPL 
Sbjct: 430 KMQAMNDEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLP 489

Query: 195 GIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIVMSFGLTNAPV 254
            I+ L  ++QG+T+F+K+DL+S+YH +R+R  D  K AFR   G +E++VM +G++ AP 
Sbjct: 490 LIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPA 549

Query: 255 VFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANKLYAKFSNCQF 314
            F   +N +  +  +S  + ++DDILI+SK+E+EH  H+  +L+ L+   L    + C+F
Sbjct: 550 HFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEF 609

Query: 315 WLKTVTFLGHVVSNEGVSVDPAKIEAV 338
               V F+G+ +S +G +     I+ V
Sbjct: 610 HQSQVKFIGYHISEKGFTPCQENIDKV 630

[Close]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL
Match: A0A5A7SIJ5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003210 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 6.2e-175
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 473 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 532

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 533 SQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 592

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 593 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 652

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 653 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 712

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 811

[Close]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.1e-175
Identity = 305/339 (89.97%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 445 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 504

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 505 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 564

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 565 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 624

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 625 VTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 684

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 685 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 744

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 745 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 783

[Close]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL
Match: A0A5D3BSV9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold827G00060 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.1e-174
Identity = 306/339 (90.27%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 433 MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 492

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 493 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 552

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPY+MAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 553 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 612

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRDSDIPKTAFR +YGHYEFIV
Sbjct: 613 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRLRYGHYEFIV 672

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 673 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 732

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 733 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 771

[Close]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL
Match: A0A5A7SU25 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00200 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.1e-174
Identity = 306/339 (90.27%), Postives = 319/339 (94.10%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 473 MQDFDMILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 532

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P RE+DFAIELEPGTA I
Sbjct: 533 SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFAIELEPGTAPI 592

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 593 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 652

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KN YPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRDSDIPKTAFRS+YGHYEF+V
Sbjct: 653 VTVKNCYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDSDIPKTAFRSRYGHYEFVV 712

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           MSFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 713 MSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 772

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS EGVSVDPAKIEAVTN
Sbjct: 773 LYAKFSKCEFWLRKVTFLGHVVSREGVSVDPAKIEAVTN 811

[Close]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL
Match: A0A5A7TVN9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00750 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 2.4e-174
Identity = 304/339 (89.68%), Postives = 320/339 (94.40%), Query Frame = 0


Query: 1   MRDFDLILGTDWLSANHASIDCFGKEVVFNPLSGPSFKFRGAGIICIPKVISAMKASKLL 60
           M+DFD+ILG DWLSANHA+IDCFGKEVVFNP SG SFKFRGAG++CIPKVISAMKASKLL
Sbjct: 11  MQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKVISAMKASKLL 70

Query: 61  SQGTWGILASVVDTREPEVSLSSEPVVREYPDVFPDKLPGILPLREIDFAIELEPGTALI 120
           SQGTWGILASVVD REPEVSLSSEPVVREYPDVFPD+LPG+ P +E+DFAIELEPGTA I
Sbjct: 71  SQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPKEVDFAIELEPGTAPI 130

Query: 121 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 131 SRAPYKMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 190

Query: 181 VTTKNRYPLLGIDDLFDQLQGATVFSKIDLRSSYHQLRIRDSDIPKTAFRSKYGHYEFIV 240
           VT KNRYPL  IDDLFDQLQGATVFSKIDLRS YHQLRIRD DIPKTAFRS+YGHYEF+V
Sbjct: 191 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFRSRYGHYEFVV 250

Query: 241 MSFGLTNAPVVFMDLMNMVFKDFLDSFPIVFIDDILIYSKTEAEHEGHLHQILENLRANK 300
           +SFGLTNAP VFMDLMN VFKDFLDSF IVFIDDILIYSKTEAEHE HLHQ+LE LRANK
Sbjct: 251 ISFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANK 310

Query: 301 LYAKFSNCQFWLKTVTFLGHVVSNEGVSVDPAKIEAVTN 340
           LYAKFS C+FWL+ VTFLGHVVS+EGVSVDPAKIEAVTN
Sbjct: 311 LYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTN 349

[Close]

BLAST of Cmc06g0167281 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.3e-04
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0


Query: 288 HLHQILENLRANKLYAKFSNCQFWLKTVTFLG--HVVSNEGVSVDPAKIEAV 338
           HL  +L+    ++ YA    C F    + +LG  H++S EGVS DPAK+EA+
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAM 54

The following BLAST results are available for this feature:

BLAST of Cmc06g0167281 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025998.1	1.3e-174	89.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0060745.1	1.7e-174	89.97	pol protein [Cucumis melo var. makuwa]	[more]
KAA0033486.1	2.2e-174	90.27	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01306.1	2.2e-174	90.27	pol protein [Cucumis melo var. makuwa]	[more]
KAA0045309.1	4.9e-174	89.68	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc06g0167281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	3.5e-42	34.90	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	3.5e-42	34.90	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
P0CT41	3.9e-41	32.96	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.9e-41	32.96	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.9e-41	32.96	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc06g0167281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SIJ5	6.2e-175	89.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34...	[more]
A0A5A7V4E4	8.1e-175	89.97	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5D3BSV9	1.1e-174	90.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold82...	[more]
A0A5A7SU25	1.1e-174	90.27	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26...	[more]
A0A5A7TVN9	2.4e-174	89.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]

BLAST of Cmc06g0167281 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.3e-04	40.38	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..322 e-value: 2.6E-86 score: 290.3
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..247 e-value: 2.6E-86 score: 290.3
None	No IPR available	PFAM	PF08284	RVP_2	coord: 1..31 e-value: 8.6E-7 score: 28.8
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 123..339
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 123..339
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..322 e-value: 1.07447E-89 score: 264.457
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 162..321 e-value: 1.1E-22 score: 80.7
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 143..322 score: 10.925517
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc06g0167281.1	Cmc06g0167281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding